Rmu_sc0000281.1_g000006
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000281.1
Physical Location & Seq
Reverse (-)
22859 .. 26923
4065 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000281.1_g000006.1.cds

Sequence Viewer

Length: 2031 bp
atggggaggatagtcggagtcagaatcgggagtatcgatttcaacggcggaggcggcggtggaagagtcgtgctcgggcaactcgacagccggcaacgatttgaaggaagcctcgggagcagcggcggcagaggcggaggaaaagctggccggcacagagaagagggaaggtgggggcgatccgaaccggctgctggctttcgtcggagaagatgcaggaggagagagaaaaccatgggtatccagatggcgcgtgctgtcgaggatggaggttacacaggatttgggttaatggcaagtggtggagaccagttgtgttgcagagtttcgttttcgatctggtttgtggatctgtggttagatccaatcggatgtcggctcaaatccattggagattggggtttcagatcttgcagcaggcgatcccttgatggtgggttggaggagggtggcggtgggtggcccggatcttgtattgatcttcatggattggggggttgtgttttggggttgggaaggaatcagagagagaaagagaaagaggcaacgctacaaatggggaaactgatcgagagagaagggaagaagaacagaagaaaagaatggaactattcggacttcttaagagtttcatatagtactctttcagaagcaaccgatagtttctcttcagcaaatttggttggcgttggtagtttcgggtctgtgtataaagtagttcttgtcacgccatcccatgaagctcaacttattgttgctgtgaaggtgtttaacatgttacgctggggagcttccaatagttttgcagccgaatgtgagatgtttagaaatatcagacatcgcaacatcgttaagattgtaacaacatgttcaagtgttgattttcgtggcaatgatttcaaagctctggtttatgagttcatggagaatggaagcttggaagagtggttgcacccaacagttggaacacaaaacccgcccaagaatttatatcttcttgagaggctagacatcgccattgatgttgcttgcgcactagattacctccacaatcattgtgaaacaccgatagttcattgtgatctcaagctgagcaatgttcttttagacaccgagttgactggacacctttctgactttggattggcgagatttctctcgaaaaccaataacgttgctgcaaatcaatcaagttcaaggggatctgttggctatgttgcgccagagtacaaaaagggaagtgaggcatcaacatatggggatgtctatagctttggcattctattgttagagatgtttacaggaaagaagcccagtgaccacatgtttcgtgacgacttgaaccttcatactttcgtgaagatggcttactttgagcgagctatagagattgcagattcaagactatttcttcaagaagaaaaccataatattcccatcaagtaccgtgagagattctcattggaaattcaggagtgcttgagctggatatttggaattggaattgtgtgttctagcaagtccccaagagacagaatggatatgggttatgtggtaactaaattgcaatgcattagaaacattctgaacggactatatggttgtgtaagctccaattgcaactgcgtggtttgtcgacgcaagatgcacccattcctttgtcgacgcacggcacgggcacaaaatttctttgataataagaggaatagcaaaaagaaagccctagagagcgccgccactacagtcgatagagaaaaccgattctcgtccggcggtacactctcctggcgtcgtcttcggacgggttatagtggacctattgtccgacggtgggatggtggctggtgggtgttgatctccccaagattggagtgcagacggtgggaagggaggttggctggtggtgatgagtcggtggcggcaaggaggggatctgaagtggtgagatcggatcgatttgttccgatctggtttgggcatgctttgatctggtttggagcctttgtgtggaaaggggtgaagagggtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

676

Amino Acids

75.78

Weight (kDa)

9.41

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1033
AccB7I CCANNNNNTGG 1 cut(s) 962
AccI GTMKAC 2 cut(s) 1636, 1663
AccII CGCG 1 cut(s) 253
AclI AACGTT 1 cut(s) 1173
AclWI GGATC 8 cut(s) 174, 356, 357, 417, 475, 1210, 1939, 1959
AcoI YGGCCR 1 cut(s) 148
AcsI RAATTY 4 cut(s) 676, 985, 1467, 1684
AcuI CTGAAG 2 cut(s) 654, 1956
AcyI GRCGYC 1 cut(s) 1789
AfaI GTAC 4 cut(s) 640, 1229, 1445, 1777
AfiI CCNNNNNNNGG 5 cut(s) 194, 962, 1831, 1867, 2007
AflII CTTAAG 1 cut(s) 622
AflIII ACRYGT 3 cut(s) 774, 866, 1323
AgsI TTSAA 8 cut(s) 43, 104, 873, 901, 1197, 1342, 1401, 1415
AhdI GACNNNNNGTC 1 cut(s) 1820
AjnI CCWGG 1 cut(s) 1784
AjuI GAANNNNNNNTTGG 2 cut(s) 920, 952
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 2 cut(s) 300, 1524
AlwI GGATC 8 cut(s) 174, 356, 357, 417, 475, 1210, 1939, 1959
Ama87I CYCGRG 2 cut(s) 74, 113
AoxI GGCC 2 cut(s) 148, 461
ApeKI GCWGC 5 cut(s) 120, 191, 414, 806, 1178
ApoI RAATTY 4 cut(s) 676, 985, 1467, 1684
AspLEI GCGC 4 cut(s) 253, 1034, 1222, 1733
AspS9I GGNCC 2 cut(s) 462, 1814
AsuC2I CCSGG 1 cut(s) 465
AsuHPI GGTGA 3 cut(s) 1916, 1954, 2029
AvaI CYCGRG 2 cut(s) 74, 113
AvaII GGWCC 1 cut(s) 1814
BaeGI GKGCMC 1 cut(s) 1681
BarI GAAGNNNNNNTAC 2 cut(s) 1352, 1384
BbsI GAAGAC 1 cut(s) 1787
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 5 cut(s) 132, 178, 426, 818, 1165
BccI CCATC 7 cut(s) 241, 260, 425, 739, 1357, 1445, 1829
BceAI ACGGC 2 cut(s) 61, 1686
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 1 cut(s) 1786
BciVI GTATCC 1 cut(s) 251
BcnI CCSGG 1 cut(s) 465
BcoDI GTCTC 2 cut(s) 300, 1524
BfaI CTAG 4 cut(s) 1007, 1037, 1515, 1724
BfmI CTRYAG 3 cut(s) 1267, 1383, 1740
BfoI RGCGCY 1 cut(s) 1734
BfrI CTTAAG 1 cut(s) 622
BfuI GTATCC 1 cut(s) 251
BglII AGATCT 1 cut(s) 407
BlpI GCTNAGC 1 cut(s) 1091
BmcAI AGTACT 1 cut(s) 640
Bme1390I CCNGG 2 cut(s) 465, 1786
Bme18I GGWCC 1 cut(s) 1814
BmeRI GACNNNNNGTC 1 cut(s) 1820
BmeT110I CYCGRG 2 cut(s) 74, 113
BmgT120I GGNCC 2 cut(s) 462, 1814
BmiI GGNNCC 1 cut(s) 1999
BmrFI CCNGG 2 cut(s) 465, 1786
BmrI ACTGGG 1 cut(s) 1308
BmsI GCATC 3 cut(s) 203, 1256, 1635
BmuI ACTGGG 1 cut(s) 1308
BpiI GAAGAC 1 cut(s) 1787
BplI GAGNNNNNCTC 4 cut(s) 57, 89, 1442, 1474
Bpu1102I GCTNAGC 1 cut(s) 1091
BpuEI CTTGAG 3 cut(s) 1019, 1070, 1501
BpuMI CCSGG 1 cut(s) 465
Bsa29I ATCGAT 2 cut(s) 36, 1954
BsaHI GRCGYC 1 cut(s) 1789
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 2 cut(s) 112, 234
BsaXI ACNNNNNCTCC 2 cut(s) 1989, 2019
Bsc4I CCNNNNNNNGG 5 cut(s) 194, 962, 1831, 1867, 2007
Bse118I RCCGGY 3 cut(s) 90, 150, 187
Bse1I ACTGG 3 cut(s) 310, 1126, 1314
Bse3DI GCAATG 3 cut(s) 898, 1102, 1574
BseBI CCWGG 1 cut(s) 1786
BseCI ATCGAT 2 cut(s) 36, 1954
BseDI CCNNGG 2 cut(s) 112, 234
BseGI GGATG 5 cut(s) 271, 377, 731, 1267, 1840
BseLI CCNNNNNNNGG 5 cut(s) 194, 962, 1831, 1867, 2007
BseMI GCAATG 3 cut(s) 898, 1102, 1574
BseMII CTCAG 1 cut(s) 1082
BseNI ACTGG 3 cut(s) 310, 1126, 1314
BseRI GAGGAG 2 cut(s) 235, 458
BseSI GKGCMC 1 cut(s) 1681
BseXI GCAGC 5 cut(s) 132, 178, 426, 818, 1165
BseYI CCCAGC 1 cut(s) 783
BsgI GTGCAG 1 cut(s) 1894
Bsh1236I CGCG 1 cut(s) 253
BshFI GGCC 2 cut(s) 150, 463
BshVI ATCGAT 2 cut(s) 36, 1954
BsiHKAI GWGCWC 1 cut(s) 75
BsiHKCI CYCGRG 2 cut(s) 74, 113
BsiSI CCGG 5 cut(s) 91, 151, 188, 465, 1770
BslFI GGGAC 1 cut(s) 1507
BslI CCNNNNNNNGG 5 cut(s) 194, 962, 1831, 1867, 2007
BsmAI GTCTC 2 cut(s) 300, 1524
BsmFI GGGAC 1 cut(s) 1507
BsmI GAATGC 1 cut(s) 1278
BsnI GGCC 2 cut(s) 150, 463
Bso31I GGTCTC 1 cut(s) 300
BsoBI CYCGRG 2 cut(s) 74, 113
Bsp1286I GDGCHC 2 cut(s) 75, 1681
Bsp1720I GCTNAGC 1 cut(s) 1091
Bsp19I CCATGG 1 cut(s) 234
BspANI GGCC 2 cut(s) 150, 463
BspCNI CTCAG 1 cut(s) 1083
BspDI ATCGAT 2 cut(s) 36, 1954
BspFNI CGCG 1 cut(s) 253
BspLI GGNNCC 1 cut(s) 1999
BspPI GGATC 8 cut(s) 174, 356, 357, 417, 475, 1210, 1939, 1959
BspTI CTTAAG 1 cut(s) 622
BspTNI GGTCTC 1 cut(s) 300
BsrDI GCAATG 3 cut(s) 898, 1102, 1574
BsrFI RCCGGY 3 cut(s) 90, 150, 187
BsrI ACTGG 3 cut(s) 310, 1126, 1314
BssAI RCCGGY 3 cut(s) 90, 150, 187
BssECI CCNNGG 2 cut(s) 112, 234
BssNI GRCGYC 1 cut(s) 1789
BssT1I CCWWGG 1 cut(s) 234
Bst2UI CCWGG 1 cut(s) 1786
Bst4CI ACNGT 5 cut(s) 961, 1448, 1744, 1830, 1881
Bst6I CTCTTC 5 cut(s) 58, 156, 673, 936, 2015
BstACI GRCGYC 1 cut(s) 1789
BstAFI CTTAAG 1 cut(s) 622
BstC8I GCNNGC 9 cut(s) 92, 148, 152, 196, 255, 419, 1030, 1380, 1980
BstDEI CTNAG 1 cut(s) 1091
BstDSI CCRYGG 1 cut(s) 234
BstF5I GGATG 5 cut(s) 271, 377, 731, 1267, 1840
BstFNI CGCG 1 cut(s) 253
BstH2I RGCGCY 1 cut(s) 1734
BstHHI GCGC 4 cut(s) 253, 1034, 1222, 1733
BstMAI GTCTC 2 cut(s) 300, 1524
BstMWI GCNNNNNNNGC 5 cut(s) 54, 117, 126, 132, 1617
BstNI CCWGG 1 cut(s) 1786
BstNSI RCATGY 4 cut(s) 778, 870, 1327, 1982
BstSCI CCNGG 2 cut(s) 463, 1784
BstSFI CTRYAG 3 cut(s) 1267, 1383, 1740
BstSLI GKGCMC 1 cut(s) 1681
BstUI CGCG 1 cut(s) 253
BstV1I GCAGC 5 cut(s) 132, 178, 426, 818, 1165
BstV2I GAAGAC 1 cut(s) 1787
BstX2I RGATCY 6 cut(s) 349, 361, 407, 467, 1202, 1931
BstYI RGATCY 6 cut(s) 349, 361, 407, 467, 1202, 1931
Bsu15I ATCGAT 2 cut(s) 36, 1954
BsuI GTATCC 1 cut(s) 251
BsuRI GGCC 2 cut(s) 150, 463
BsuTUI ATCGAT 2 cut(s) 36, 1954
BtgI CCRYGG 1 cut(s) 234
BtgZI GCGATG 2 cut(s) 824, 997
BtsCI GGATG 5 cut(s) 271, 377, 731, 1267, 1840
BtsIMutI CAGTG 1 cut(s) 1321
Cac8I GCNNGC 9 cut(s) 92, 148, 152, 196, 255, 419, 1030, 1380, 1980
CfoI GCGC 4 cut(s) 253, 1034, 1222, 1733
Cfr10I RCCGGY 3 cut(s) 90, 150, 187
Cfr13I GGNCC 2 cut(s) 462, 1814
ClaI ATCGAT 2 cut(s) 36, 1954
CseI GACGC 3 cut(s) 1647, 1674, 1778
Csp6I GTAC 4 cut(s) 639, 1228, 1444, 1776
CspCI CAANNNNNGTGG 2 cut(s) 1037, 1072
CviAII CATG 8 cut(s) 235, 485, 737, 775, 867, 922, 1324, 1979
CviQI GTAC 4 cut(s) 639, 1228, 1444, 1776
DdeI CTNAG 1 cut(s) 1091
DriI GACNNNNNGTC 1 cut(s) 1820
EaeI YGGCCR 1 cut(s) 148
Eam1104I CTCTTC 5 cut(s) 58, 156, 673, 936, 2015
Eam1105I GACNNNNNGTC 1 cut(s) 1820
EarI CTCTTC 5 cut(s) 58, 156, 673, 936, 2015
EciI GGCGGA 2 cut(s) 63, 150
Eco130I CCWWGG 1 cut(s) 234
Eco31I GGTCTC 1 cut(s) 300
Eco47I GGWCC 1 cut(s) 1814
Eco57I CTGAAG 2 cut(s) 654, 1956
Eco88I CYCGRG 2 cut(s) 74, 113
EcoRII CCWGG 1 cut(s) 1784
EcoT14I CCWWGG 1 cut(s) 234
EcoT22I ATGCAT 1 cut(s) 1574
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 8 cut(s) 238, 488, 740, 778, 870, 925, 1327, 1982
FalI AAGNNNNNCTT 4 cut(s) 705, 737, 732, 764
FaqI GGGAC 1 cut(s) 1507
FatI CATG 8 cut(s) 234, 484, 736, 774, 866, 921, 1323, 1978
FauI CCCGC 1 cut(s) 984
FauNDI CATATG 1 cut(s) 1255
FblI GTMKAC 2 cut(s) 1636, 1663
FokI GGATG 5 cut(s) 278, 384, 718, 1274, 1847
FspBI CTAG 4 cut(s) 1007, 1037, 1515, 1724
FspI TGCGCA 1 cut(s) 1033
GlaI GCGC 4 cut(s) 252, 1033, 1221, 1732
GsaI CCCAGC 1 cut(s) 787
HaeII RGCGCY 1 cut(s) 1734
HaeIII GGCC 2 cut(s) 150, 463
HapII CCGG 5 cut(s) 91, 151, 188, 465, 1770
HgaI GACGC 3 cut(s) 1647, 1674, 1778
HhaI GCGC 4 cut(s) 253, 1034, 1222, 1733
Hin1I GRCGYC 1 cut(s) 1789
Hin1II CATG 8 cut(s) 238, 488, 740, 778, 870, 925, 1327, 1982
Hin6I GCGC 4 cut(s) 251, 1032, 1220, 1731
HinP1I GCGC 4 cut(s) 251, 1032, 1220, 1731
HincII GTYRAC 3 cut(s) 1119, 1637, 1664
HindII GTYRAC 3 cut(s) 1119, 1637, 1664
HindIII AAGCTT 1 cut(s) 934
HinfI GANTC 8 cut(s) 18, 24, 66, 520, 1397, 1455, 1761, 1910
HpaII CCGG 5 cut(s) 91, 151, 188, 465, 1770
HphI GGTGA 3 cut(s) 1916, 1954, 2029
Hpy166II GTNNAC 6 cut(s) 1119, 1299, 1637, 1664, 1778, 1814
Hpy8I GTNNAC 6 cut(s) 1119, 1299, 1637, 1664, 1778, 1814
Hpy99I CGWCG 5 cut(s) 207, 1641, 1668, 1794, 1830
HpyAV CCTTC 7 cut(s) 98, 162, 510, 572, 757, 1355, 1880
HpyCH4III ACNGT 5 cut(s) 961, 1448, 1744, 1830, 1881
HpyCH4IV ACGT 1 cut(s) 1173
HpyF10VI GCNNNNNNNGC 5 cut(s) 54, 117, 126, 132, 1617
HpyF3I CTNAG 1 cut(s) 1091
HpySE526I ACGT 1 cut(s) 1173
Hsp92I GRCGYC 1 cut(s) 1789
Hsp92II CATG 8 cut(s) 238, 488, 740, 778, 870, 925, 1327, 1982
HspAI GCGC 4 cut(s) 251, 1032, 1220, 1731
KroI GCCGGC 2 cut(s) 90, 150
KroNI GCCGGC 2 cut(s) 92, 152
LmnI GCTCC 4 cut(s) 117, 788, 1616, 1997
Lsp1109I GCAGC 5 cut(s) 132, 178, 426, 818, 1165
LweI GCATC 3 cut(s) 203, 1256, 1635
MaeI CTAG 4 cut(s) 1007, 1037, 1515, 1724
MaeII ACGT 1 cut(s) 1173
MaeIII GTNAC 7 cut(s) 272, 724, 777, 859, 1316, 1331, 1555
MfeI CAATTG 1 cut(s) 1615
MflI RGATCY 6 cut(s) 349, 361, 407, 467, 1202, 1931
MhlI GDGCHC 2 cut(s) 75, 1681
MluCI AATT 8 cut(s) 676, 985, 1467, 1497, 1503, 1562, 1615, 1684
MlyI GAGTC 3 cut(s) 27, 75, 1919
MmeI TCCRAC 4 cut(s) 185, 420, 943, 1849
Mph1103I ATGCAT 1 cut(s) 1574
MroNI GCCGGC 2 cut(s) 90, 150
MseI TTAA 4 cut(s) 290, 623, 771, 852
MspA1I CMGCKG 1 cut(s) 123
MspCI CTTAAG 1 cut(s) 622
MspI CCGG 5 cut(s) 91, 151, 188, 465, 1770
MspR9I CCNGG 2 cut(s) 465, 1786
MunI CAATTG 1 cut(s) 1615
Mva1269I GAATGC 1 cut(s) 1278
MvaI CCWGG 1 cut(s) 1786
MvnI CGCG 1 cut(s) 253
MwoI GCNNNNNNNGC 5 cut(s) 54, 117, 126, 132, 1617
NaeI GCCGGC 2 cut(s) 92, 152
NciI CCSGG 1 cut(s) 465
NcoI CCATGG 1 cut(s) 234
NdeI CATATG 1 cut(s) 1255
NgoMIV GCCGGC 2 cut(s) 90, 150
NlaIII CATG 8 cut(s) 238, 488, 740, 778, 870, 925, 1327, 1982
NlaIV GGNNCC 1 cut(s) 1999
NmuCI GTSAC 3 cut(s) 724, 1316, 1331
NsbI TGCGCA 1 cut(s) 1033
NsiI ATGCAT 1 cut(s) 1574
NspI RCATGY 4 cut(s) 778, 870, 1327, 1982
PaeI GCATGC 1 cut(s) 1982
PciI ACATGT 3 cut(s) 774, 866, 1323
PcsI WCGNNNNNNNCGW 2 cut(s) 33, 81
PctI GAATGC 1 cut(s) 1278
PdiI GCCGGC 2 cut(s) 92, 152
PfeI GAWTC 5 cut(s) 24, 520, 1397, 1455, 1761
PflMI CCANNNNNTGG 1 cut(s) 962
PleI GAGTC 3 cut(s) 26, 74, 1918
PpsI GAGTC 3 cut(s) 26, 74, 1918
PscI ACATGT 3 cut(s) 774, 866, 1323
Psp1406I AACGTT 1 cut(s) 1173
Psp6I CCWGG 1 cut(s) 1784
PspFI CCCAGC 1 cut(s) 783
PspGI CCWGG 1 cut(s) 1784
PspN4I GGNNCC 1 cut(s) 1999
PspPI GGNCC 2 cut(s) 462, 1814
PsuI RGATCY 6 cut(s) 349, 361, 407, 467, 1202, 1931
RsaI GTAC 4 cut(s) 640, 1229, 1445, 1777
RsaNI GTAC 4 cut(s) 639, 1228, 1444, 1776
SalI GTCGAC 2 cut(s) 1635, 1662
SaqAI TTAA 4 cut(s) 290, 623, 771, 852
Sau96I GGNCC 2 cut(s) 462, 1814
ScaI AGTACT 1 cut(s) 640
SchI GAGTC 3 cut(s) 27, 75, 1919
ScrFI CCNGG 2 cut(s) 465, 1786
SduI GDGCHC 2 cut(s) 75, 1681
SfaNI GCATC 3 cut(s) 203, 1256, 1635
SfcI CTRYAG 3 cut(s) 1267, 1383, 1740
SinI GGWCC 1 cut(s) 1814
SmlI CTYRAG 4 cut(s) 622, 998, 1085, 1480
SmoI CTYRAG 4 cut(s) 622, 998, 1085, 1480
SphI GCATGC 1 cut(s) 1982
Sse9I AATT 8 cut(s) 676, 985, 1467, 1497, 1503, 1562, 1615, 1684
SspI AATATT 1 cut(s) 1432
SspMI CTAG 4 cut(s) 1007, 1037, 1515, 1724
StyD4I CCNGG 2 cut(s) 463, 1784
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 5 cut(s) 961, 1448, 1744, 1830, 1881
TaiI ACGT 1 cut(s) 1176
TasI AATT 8 cut(s) 676, 985, 1467, 1497, 1503, 1562, 1615, 1684
TatI WGTACW 2 cut(s) 638, 1227
TauI GCSGC 5 cut(s) 57, 126, 129, 1736, 1922
TfiI GAWTC 5 cut(s) 24, 520, 1397, 1455, 1761
Tru1I TTAA 4 cut(s) 290, 623, 771, 852
Tru9I TTAA 4 cut(s) 290, 623, 771, 852
TscAI CASTG 1 cut(s) 1321
TseFI GTSAC 3 cut(s) 724, 1316, 1331
TseI GCWGC 5 cut(s) 120, 191, 414, 806, 1178
Tsp45I GTSAC 3 cut(s) 724, 1316, 1331
TspDTI ATGAA 6 cut(s) 473, 621, 753, 910, 1064, 1337
TspGWI ACGGA 1 cut(s) 1605
TspRI CASTG 1 cut(s) 1321
Van91I CCANNNNNTGG 1 cut(s) 962
Vha464I CTTAAG 1 cut(s) 622
VpaK11BI GGWCC 1 cut(s) 1814
XapI RAATTY 4 cut(s) 676, 985, 1467, 1684
XceI RCATGY 4 cut(s) 778, 870, 1327, 1982
XmiI GTMKAC 2 cut(s) 1636, 1663
XspI CTAG 4 cut(s) 1007, 1037, 1515, 1724
ZrmI AGTACT 1 cut(s) 640
Zsp2I ATGCAT 1 cut(s) 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.