pycom02g17940
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
16206440 .. 16208586
2147 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g17940.1

Sequence Viewer

Length: 2004 bp
ATGTTCGATACAACCAATTTTGGGGGCAATTTAACTCGATGCATGGCCAACTTGTCTTCTTCTCTTGTATACTTGCATGTAGAACACAATAAAATATCAGGAAGCATCCCCCATGGGATTGGAAATCTGGCTAACCTAGAGAGCATTTGGTTTGCTCAGAACCAATTTTCAGAAAGCATCCCCATTGATGTGGGAAAGCTTCGGAAGTTATACGATTTAGATTTGTGTTTTAACAATCTCTCCGGCTATATCCCATCGTCATTTGGGAATTCAAGTGAACTATACATATTGAGTTTAGCCGGTAACGAACTTGACGGCAATATTCCCTCAAGTCTAGGTAAGTGCCAGAAATTTATTACCTTGATTCTTGCTAATAACAACCTCAGCGGTATCATATCCCCTCAAGTCATTGGTCTGTCATCTTCCTATGTGGAATTGGATTTCTCTAAAAATCAGTTGACTGGTTTCCTTCCCAAAGAAGTAGGAAATTTGATAAATCTGGAGTATTTTCGTGTTTCTCAAAACATGCCGTCTGGGGAAATTCCAACAAGTCTTGGTAGTTGCATAAAAATTGAATCTCTAGACCTGCAAGGAAACTTCTTTCAAGGGACGATTCCATCATCTCTAAGTTCACTAAGAGGAATCAAAGAATTATATCTTTCTCGCAACAACTTGTCAGGCTCAATTCCAGAATTCTTAGAGCGTCTTCAAGTTTTGCAATCTTTGAATCTATCTTATAACAACTTTGAGGGCATGGTACCAATGAAGGGAGTTTTCAGGAATGCAACTGCCACATCGATTGAAGGAAATAGCAAGCTTTGTGGGGGAATTCCTGGATTCCATTTGCCCAAGTGCAAACTCCAACATTCCAACAAGGGAGGATTAAGCCCAAAAATGAAATTGATAATTTCTCTGGTTTGTGGGATTCTTGGGGTTACTTTTGCACTATTCTTTTTGTACCTCCGTCGGCCACAGAGGGCAAAAATAGAGCGGACTTCAAGTGATTCAGAAAAATTTCTCTCAGTCTCTTACCAAAGTGTTCTCAAAGCTACTGATGGATTTTCCTGTGTCAACTTGATTGGTATGGGCAGTTTTGGGTCTGTCTATAAAGGAGTACTTGAGCAAGGTGAAACAATTGCTGTCAAAATACTCAACCTTGCTCGTCTCAGAGCTTACAAAAGTTTTAGTGCTGAGTGTGAGGCTTTAAGAAATATTAGACACCGTAATCTTGTCAAGGTACTCTTGGCATGTTCTGGTTTTGATTATCGCGGTCACGATTTCAAGGCGTTAATTTATGAGTTCATGGTTAACGGGAGCTTGGAGGAATGGTTGCATCCAACTCATACAATTGGTGAGACAAGTCAGAGGCCAAGGAGCTTAACAATTTCTCAGAGGTTGAATATTGTTATTGATGTTTCTATGGCACTGGATTATCTCCATCATCATTGTGAGACGCCAATAGTTCATTGCGACCTCAAACCTAGCAATATTCTTCTCAATGAGGACATGGTTGCACACGTAGGTGACTTTGGGTTGGTGAGGTTCCTACCAAAAGCTGCTGAAAATTCTTTGGAAAATCAATCAAGTTCTTTAGGGATCAAGGGAACTATTGGTTATGCTCCTCTAGAATATGGCATGGGACATGAAGTGTGGACACAAGGTGATGTGTACAGCTTTGGTATCCTCCTGTTGGAAATATTTACAGGAAAGCGACCAACCGATAACATGTTTGAGGGAACTTCAAACCTTCATAACTTTGTGAAGGCAGCTCTGCCGGAGAAAGTGGAAGAGGTTTTGGATCCTGTTCTTGTTCAAGAGAGCGATTGTCATGACGAGGATAGCGAAAGGAATCACGTCCAAATTGAAAAAAGTTTAATGTTAGTTTTAGAAATAGGTGTTGCTTGCTCAGCAGAGATGCCTAGAGAAAGATTGGACATCAGTGATGCTATGGCACAAATGTGTCTGATCAGAAACAAACTTCGAGCAAATGGTACATGTGAATAG

Protein Analysis

668

Amino Acids

73.72

Weight (kDa)

6.09

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 191 - 249 2.1e-08 Leucine rich repeat
Pkinase PF00069 357 - 588 4.2e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 358 - 585 3.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 738
Acc36I ACCTGC 1 cut(s) 594
Acc65I GGTACC 1 cut(s) 757
AccB1I GGYRCC 1 cut(s) 757
AccBSI CCGCTC 1 cut(s) 991
AccI GTMKAC 1 cut(s) 69
AccII CGCG 1 cut(s) 1269
AciI CCGC 3 cut(s) 387, 991, 1269
AclWI GGATC 3 cut(s) 1604, 1793, 1806
AcoI YGGCCR 2 cut(s) 45, 968
AcsI RAATTY 8 cut(s) 268, 350, 487, 540, 692, 828, 1013, 1564
AcyI GRCGYC 1 cut(s) 1454
AdeI CACNNNGTG 1 cut(s) 1661
AfaI GTAC 6 cut(s) 759, 959, 1116, 1239, 1670, 1993
AfiI CCNNNNNNNGG 3 cut(s) 21, 767, 1690
AflIII ACRYGT 3 cut(s) 1516, 1725, 1994
AjiI CACGTC 1 cut(s) 1855
AjnI CCWGG 1 cut(s) 832
AleI CACNNNNGTG 2 cut(s) 1521, 1957
AluBI AGCT 9 cut(s) 199, 817, 1049, 1172, 1317, 1377, 1556, 1674, 1769
AluI AGCT 9 cut(s) 199, 817, 1049, 1172, 1317, 1377, 1556, 1674, 1769
Alw26I GTCTC 4 cut(s) 1030, 1169, 1349, 1445
AlwI GGATC 3 cut(s) 1604, 1793, 1806
AoxI GGCC 3 cut(s) 45, 968, 1367
ApeKI GCWGC 2 cut(s) 1556, 1766
ApoI RAATTY 8 cut(s) 268, 350, 487, 540, 692, 828, 1013, 1564
Asp700I GAANNNNTTC 1 cut(s) 1014
Asp718I GGTACC 1 cut(s) 757
AsuHPI GGTGA 5 cut(s) 1139, 1364, 1535, 1549, 1673
BalI TGGCCA 1 cut(s) 47
BamHI GGATCC 1 cut(s) 1798
BanI GGYRCC 1 cut(s) 757
BbsI GAAGAC 2 cut(s) 48, 698
BbvCI CCTCAGC 1 cut(s) 383
BbvI GCAGC 2 cut(s) 1543, 1778
BccI CCATC 4 cut(s) 262, 625, 1049, 1446
BceAI ACGGC 2 cut(s) 331, 514
BciT130I CCWGG 1 cut(s) 834
BciVI GTATCC 1 cut(s) 1691
BclI TGATCA 1 cut(s) 1965
BcoDI GTCTC 4 cut(s) 1030, 1169, 1349, 1445
BfaI CTAG 6 cut(s) 137, 335, 581, 1482, 1625, 1920
BfuAI ACCTGC 1 cut(s) 594
BfuI GTATCC 1 cut(s) 1691
BisI GCNGC 2 cut(s) 1557, 1767
BlpI GCTNAGC 1 cut(s) 1906
BlsI GCNGC 2 cut(s) 1558, 1768
BmcAI AGTACT 1 cut(s) 1116
Bme1390I CCNGG 1 cut(s) 834
BmgBI CACGTC 1 cut(s) 1855
BmiI GGNNCC 3 cut(s) 759, 1544, 1800
BmrFI CCNGG 1 cut(s) 834
BmsI GCATC 6 cut(s) 29, 114, 186, 1342, 1905, 1933
BpiI GAAGAC 2 cut(s) 48, 698
BpmI CTGGAG 1 cut(s) 521
Bpu10I CCTNAGC 1 cut(s) 383
Bpu1102I GCTNAGC 1 cut(s) 1906
BpuEI CTTGAG 3 cut(s) 313, 387, 1139
Bsa29I ATCGAT 1 cut(s) 797
BsaAI YACGTR 1 cut(s) 1519
BsaHI GRCGYC 1 cut(s) 1454
BsaJI CCNNGG 2 cut(s) 112, 1370
BsaXI ACNNNNNCTCC 4 cut(s) 224, 254, 1313, 1343
Bsc4I CCNNNNNNNGG 3 cut(s) 21, 767, 1690
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 2 cut(s) 466, 1431
Bse3DI GCAATG 1 cut(s) 1465
BseBI CCWGG 1 cut(s) 834
BseCI ATCGAT 1 cut(s) 797
BseDI CCNNGG 2 cut(s) 112, 1370
BseGI GGATG 3 cut(s) 105, 177, 1333
BseLI CCNNNNNNNGG 3 cut(s) 21, 767, 1690
BseMI GCAATG 1 cut(s) 1465
BseMII CTCAG 7 cut(s) 170, 397, 1035, 1180, 1182, 1403, 1920
BseNI ACTGG 2 cut(s) 466, 1431
BseRI GAGGAG 1 cut(s) 1611
BseXI GCAGC 2 cut(s) 1543, 1778
Bsh1236I CGCG 1 cut(s) 1269
BshFI GGCC 3 cut(s) 47, 970, 1369
BshNI GGYRCC 1 cut(s) 757
BshVI ATCGAT 1 cut(s) 797
BsiSI CCGG 3 cut(s) 243, 300, 1775
BslFI GGGAC 2 cut(s) 622, 1653
BslI CCNNNNNNNGG 3 cut(s) 21, 767, 1690
BsmAI GTCTC 4 cut(s) 1030, 1169, 1349, 1445
BsmBI CGTCTC 2 cut(s) 1169, 1445
BsmFI GGGAC 2 cut(s) 622, 1653
BsmI GAATGC 1 cut(s) 787
BsnI GGCC 3 cut(s) 47, 970, 1369
Bsp1407I TGTACA 1 cut(s) 1668
Bsp143I GATC 3 cut(s) 1596, 1798, 1965
Bsp1720I GCTNAGC 1 cut(s) 1906
Bsp19I CCATGG 1 cut(s) 112
BspACI CCGC 3 cut(s) 387, 991, 1269
BspANI GGCC 3 cut(s) 47, 970, 1369
BspCNI CTCAG 7 cut(s) 169, 396, 1034, 1179, 1183, 1402, 1919
BspDI ATCGAT 1 cut(s) 797
BspFNI CGCG 1 cut(s) 1269
BspHI TCATGA 1 cut(s) 1828
BspLI GGNNCC 3 cut(s) 759, 1544, 1800
BspMI ACCTGC 1 cut(s) 594
BspPI GGATC 3 cut(s) 1604, 1793, 1806
BspT107I GGYRCC 1 cut(s) 757
BsrBI CCGCTC 1 cut(s) 991
BsrDI GCAATG 1 cut(s) 1465
BsrFI RCCGGY 1 cut(s) 299
BsrGI TGTACA 1 cut(s) 1668
BsrI ACTGG 2 cut(s) 466, 1431
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 2 cut(s) 112, 1370
BssMI GATC 3 cut(s) 1596, 1798, 1965
BssNAI GTATAC 1 cut(s) 70
BssNI GRCGYC 1 cut(s) 1454
BssT1I CCWWGG 2 cut(s) 112, 1370
Bst1107I GTATAC 1 cut(s) 70
Bst2UI CCWGG 1 cut(s) 834
Bst4CI ACNGT 1 cut(s) 1223
Bst6I CTCTTC 1 cut(s) 1782
BstACI GRCGYC 1 cut(s) 1454
BstAUI TGTACA 1 cut(s) 1668
BstBAI YACGTR 1 cut(s) 1519
BstC8I GCNNGC 2 cut(s) 815, 1903
BstDSI CCRYGG 1 cut(s) 112
BstF5I GGATG 3 cut(s) 105, 177, 1333
BstFNI CGCG 1 cut(s) 1269
BstKTI GATC 3 cut(s) 1599, 1801, 1968
BstMAI GTCTC 4 cut(s) 1030, 1169, 1349, 1445
BstMBI GATC 3 cut(s) 1596, 1798, 1965
BstMWI GCNNNNNNNGC 1 cut(s) 1907
BstNI CCWGG 1 cut(s) 834
BstNSI RCATGY 5 cut(s) 80, 529, 1251, 1729, 1998
BstSCI CCNGG 1 cut(s) 832
BstUI CGCG 1 cut(s) 1269
BstV1I GCAGC 2 cut(s) 1543, 1778
BstV2I GAAGAC 2 cut(s) 48, 698
BstX2I RGATCY 1 cut(s) 1798
BstXI CCANNNNNNTGG 2 cut(s) 119, 190
BstYI RGATCY 1 cut(s) 1798
BstZ17I GTATAC 1 cut(s) 70
Bsu15I ATCGAT 1 cut(s) 797
BsuI GTATCC 1 cut(s) 1691
BsuRI GGCC 3 cut(s) 47, 970, 1369
BsuTUI ATCGAT 1 cut(s) 797
BtgI CCRYGG 1 cut(s) 112
BtrI CACGTC 1 cut(s) 1855
BtsCI GGATG 3 cut(s) 105, 177, 1333
BtsIMutI CAGTG 2 cut(s) 1424, 1945
BveI ACCTGC 1 cut(s) 594
Cac8I GCNNGC 2 cut(s) 815, 1903
CciI TCATGA 1 cut(s) 1828
Cfr10I RCCGGY 1 cut(s) 299
ClaI ATCGAT 1 cut(s) 797
CseI GACGC 2 cut(s) 692, 1462
Csp6I GTAC 6 cut(s) 758, 958, 1115, 1238, 1669, 1992
CspCI CAANNNNNGTGG 4 cut(s) 781, 802, 816, 837
CviQI GTAC 6 cut(s) 758, 958, 1115, 1238, 1669, 1992
DpnI GATC 3 cut(s) 1598, 1800, 1967
DpnII GATC 3 cut(s) 1596, 1798, 1965
DraIII CACNNNGTG 1 cut(s) 1661
EaeI YGGCCR 2 cut(s) 45, 968
Eam1104I CTCTTC 1 cut(s) 1782
EarI CTCTTC 1 cut(s) 1782
Eco130I CCWWGG 2 cut(s) 112, 1370
EcoRI GAATTC 3 cut(s) 268, 692, 828
EcoRII CCWGG 1 cut(s) 832
EcoT14I CCWWGG 2 cut(s) 112, 1370
EcoT22I ATGCAT 1 cut(s) 44
ErhI CCWWGG 2 cut(s) 112, 1370
Esp3I CGTCTC 2 cut(s) 1169, 1445
FalI AAGNNNNNCTT 4 cut(s) 1101, 1133, 1226, 1258
FaqI GGGAC 2 cut(s) 622, 1653
FbaI TGATCA 1 cut(s) 1965
FblI GTMKAC 1 cut(s) 69
Fnu4HI GCNGC 2 cut(s) 1557, 1767
FokI GGATG 3 cut(s) 92, 164, 1320
Fsp4HI GCNGC 2 cut(s) 1557, 1767
FspBI CTAG 6 cut(s) 137, 335, 581, 1482, 1625, 1920
GluI GCNGC 2 cut(s) 1557, 1767
GsuI CTGGAG 1 cut(s) 521
HaeIII GGCC 3 cut(s) 47, 970, 1369
HapII CCGG 3 cut(s) 243, 300, 1775
HgaI GACGC 2 cut(s) 692, 1462
Hin1I GRCGYC 1 cut(s) 1454
HincII GTYRAC 3 cut(s) 459, 1072, 1309
HindII GTYRAC 3 cut(s) 459, 1072, 1309
HindIII AAGCTT 2 cut(s) 197, 815
HinfI GANTC 9 cut(s) 364, 575, 613, 642, 727, 837, 925, 1004, 1849
HpaI GTTAAC 1 cut(s) 1309
HpaII CCGG 3 cut(s) 243, 300, 1775
HphI GGTGA 5 cut(s) 1139, 1364, 1535, 1549, 1673
Hpy166II GTNNAC 8 cut(s) 70, 278, 459, 632, 1072, 1309, 1653, 1669
Hpy188I TCNGA 9 cut(s) 159, 172, 204, 1009, 1169, 1365, 1392, 1965, 1970
Hpy188III TCNNGA 9 cut(s) 99, 500, 581, 689, 778, 1274, 1625, 1814, 1829
Hpy8I GTNNAC 8 cut(s) 70, 278, 459, 632, 1072, 1309, 1653, 1669
Hpy99I CGWCG 1 cut(s) 969
HpyAV CCTTC 5 cut(s) 479, 760, 797, 1756, 1757
HpyCH4III ACNGT 1 cut(s) 1223
HpyCH4IV ACGT 2 cut(s) 1518, 1854
HpyF10VI GCNNNNNNNGC 1 cut(s) 1907
HpySE526I ACGT 2 cut(s) 1518, 1854
Hsp92I GRCGYC 1 cut(s) 1454
KpnI GGTACC 1 cut(s) 761
Ksp22I TGATCA 1 cut(s) 1965
KspAI GTTAAC 1 cut(s) 1309
Kzo9I GATC 3 cut(s) 1596, 1798, 1965
LmnI GCTCC 3 cut(s) 1314, 1374, 1624
Lsp1109I GCAGC 2 cut(s) 1543, 1778
LweI GCATC 6 cut(s) 29, 114, 186, 1342, 1905, 1933
MaeI CTAG 6 cut(s) 137, 335, 581, 1482, 1625, 1920
MaeII ACGT 2 cut(s) 1518, 1854
MaeIII GTNAC 4 cut(s) 302, 934, 1271, 1523
MalI GATC 3 cut(s) 1598, 1800, 1967
MbiI CCGCTC 1 cut(s) 991
MboI GATC 3 cut(s) 1596, 1798, 1965
MboII GAAGA 6 cut(s) 48, 51, 414, 698, 1484, 1799
MfeI CAATTG 2 cut(s) 1134, 1347
MflI RGATCY 1 cut(s) 1798
MlsI TGGCCA 1 cut(s) 47
MluNI TGGCCA 1 cut(s) 47
MmeI TCCRAC 5 cut(s) 569, 886, 894, 1361, 1671
Mox20I TGGCCA 1 cut(s) 47
Mph1103I ATGCAT 1 cut(s) 44
MroXI GAANNNNTTC 1 cut(s) 1014
MscI TGGCCA 1 cut(s) 47
MseI TTAA 8 cut(s) 32, 231, 884, 1205, 1289, 1308, 1379, 1874
MslI CAYNNNNRTG 4 cut(s) 188, 1446, 1521, 1957
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 1 cut(s) 387
MspI CCGG 3 cut(s) 243, 300, 1775
MspR9I CCNGG 1 cut(s) 834
MunI CAATTG 2 cut(s) 1134, 1347
Mva1269I GAATGC 1 cut(s) 787
MvaI CCWGG 1 cut(s) 834
MvnI CGCG 1 cut(s) 1269
MwoI GCNNNNNNNGC 1 cut(s) 1907
NcoI CCATGG 1 cut(s) 112
NdeII GATC 3 cut(s) 1596, 1798, 1965
NlaIV GGNNCC 3 cut(s) 759, 1544, 1800
NmuCI GTSAC 2 cut(s) 1271, 1523
NsiI ATGCAT 1 cut(s) 44
NspI RCATGY 5 cut(s) 80, 529, 1251, 1729, 1998
OliI CACNNNNGTG 2 cut(s) 1521, 1957
PagI TCATGA 1 cut(s) 1828
PciI ACATGT 2 cut(s) 1725, 1994
PcsI WCGNNNNNNNCGW 1 cut(s) 1839
PctI GAATGC 1 cut(s) 787
PdmI GAANNNNTTC 1 cut(s) 1014
PfeI GAWTC 9 cut(s) 364, 575, 613, 642, 727, 837, 925, 1004, 1849
PfoI TCCNGGA 1 cut(s) 832
PkrI GCNGC 2 cut(s) 1558, 1768
Ppu21I YACGTR 1 cut(s) 1519
PscI ACATGT 2 cut(s) 1725, 1994
PsiI TTATAA 1 cut(s) 738
Psp6I CCWGG 1 cut(s) 832
PspGI CCWGG 1 cut(s) 832
PspN4I GGNNCC 3 cut(s) 759, 1544, 1800
PsuI RGATCY 1 cut(s) 1798
RsaI GTAC 6 cut(s) 759, 959, 1116, 1239, 1670, 1993
RsaNI GTAC 6 cut(s) 758, 958, 1115, 1238, 1669, 1992
RseI CAYNNNNRTG 4 cut(s) 188, 1446, 1521, 1957
SaqAI TTAA 8 cut(s) 32, 231, 884, 1205, 1289, 1308, 1379, 1874
SatI GCNGC 2 cut(s) 1557, 1767
Sau3AI GATC 3 cut(s) 1596, 1798, 1965
ScaI AGTACT 1 cut(s) 1116
ScrFI CCNGG 1 cut(s) 834
SfaNI GCATC 6 cut(s) 29, 114, 186, 1342, 1905, 1933
SmiMI CAYNNNNRTG 4 cut(s) 188, 1446, 1521, 1957
SmlI CTYRAG 3 cut(s) 328, 402, 1118
SmoI CTYRAG 3 cut(s) 328, 402, 1118
SsiI CCGC 3 cut(s) 387, 991, 1269
SspI AATATT 5 cut(s) 322, 1213, 1402, 1489, 1698
SspMI CTAG 6 cut(s) 137, 335, 581, 1482, 1625, 1920
StyD4I CCNGG 1 cut(s) 832
StyI CCWWGG 2 cut(s) 112, 1370
TaaI ACNGT 1 cut(s) 1223
TaiI ACGT 2 cut(s) 1521, 1857
TaqI TCGA 4 cut(s) 6, 37, 797, 1981
TatI WGTACW 2 cut(s) 1114, 1668
TfiI GAWTC 9 cut(s) 364, 575, 613, 642, 727, 837, 925, 1004, 1849
Tru1I TTAA 8 cut(s) 32, 231, 884, 1205, 1289, 1308, 1379, 1874
Tru9I TTAA 8 cut(s) 32, 231, 884, 1205, 1289, 1308, 1379, 1874
TscAI CASTG 2 cut(s) 1431, 1945
TseFI GTSAC 2 cut(s) 1271, 1523
TseI GCWGC 2 cut(s) 1556, 1766
Tsp45I GTSAC 2 cut(s) 1271, 1523
TspDTI ATGAA 6 cut(s) 779, 911, 1291, 1454, 1659, 1739
TspGWI ACGGA 1 cut(s) 953
TspRI CASTG 2 cut(s) 1431, 1945
XapI RAATTY 8 cut(s) 268, 350, 487, 540, 692, 828, 1013, 1564
XbaI TCTAGA 2 cut(s) 580, 1624
XceI RCATGY 5 cut(s) 80, 529, 1251, 1729, 1998
XmiI GTMKAC 1 cut(s) 69
XmnI GAANNNNTTC 1 cut(s) 1014
XspI CTAG 6 cut(s) 137, 335, 581, 1482, 1625, 1920
ZrmI AGTACT 1 cut(s) 1116
Zsp2I ATGCAT 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.