MD07G1164700.v1.1

LRR receptor-like serine threonine-protein kinase At3g47570

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
23962107 .. 23966537
4431 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1164700.v1.1.491

Sequence Viewer

Length: 3360 bp
ATGGGGATTTACAAGTTTATTTCATCACTTCTCTTTTTCTCATCTTTTTGCATCCATGTTGTTGTTCTTACCTCATGTCTTAGTTCAGGCCTCGCCGGATCAAATGAGACAGATAAACTGGCCTTGCTTGAATTCAAGGCCAGGATAACCAGTGACCCCTTTGGTATCATGACTTCATGGAACGAAACCATCCACTTTTGCCATTGGTACGGTGTTACATGTGGTCACCGCCACAAGAGGATCACAATGTTGAAGTTGCGGTCCTTGAAACTTGGAGGCTCTATATCACCACATGTTGGAAATTTGAGCTTCCTCAGAGTGTTTAGTCTCATAAACAACAGCTTCCGCCATCAAATTCCTCCAGAAATTGGCCGCATGCGCAGGCTGCAACGTTTGGTATTGCAAAATAATTCATTGAGTGGAGAAATTCCCGCTAATTTATCAGGTTGCTCAAAACTCAACCGGATATATGTTGGCTTCAATTCGTTAGAAGGTAGTATCCCTAAGGAGCTTGGCACCTTGTCAAAGCTAAAAGAATTTGTTATTGACTTCAACAACTTTAGAGGAAGAATCCCCTTCTCTTTTGCCAATTTGTCATCTCTTGAAGTGATTGCTACACTTTTTAATAATTTTGGTGGCAGTATTCCAGATATCTTTGGTCGACTGACCAATCTTTATTTTCTTGGATTGGATGAAAATGAATTTTCTGGTATGTTCCCTTCCTCAGTTTTCAATCTCTCTTCTCTCGAAACCTTTGCTGCCGTAGAAAACAAACTTCATGGCACTTTTCCTTCAAACTTAGGCATTGCCTATCCAAGACTGCAAACCTTTGCCATTGGTTTGAATCAATTCAGTGGAACTATTCCCGTTTCAATATCTAATGCCTCTAATCTATTTGAGCTAGGACTCGGATCTAATCAATTGCATGGAGAAGTTCCCTCTTTGAAAAATTTACACAAGCTCGGGAGGTTTAATCTTGCTTATAACCATCTTGTAAGCGGGGGAATTGGTGATGACTTGAGCTTTCTCTGCGATCTGACTAATGCCACCCTTTTACAATCTTTGTATATCCATTCAAACAAATTTCGTGGTACGTTGCCTCAATGCATAGCCAACCTATCTTCTTCTCTTGTATCTTTTTCTATAGCCGAGAATGATATATTTGGCACTATCCCAAATGGGATGGAAAATCTGCATAACCTGGAAAGCCTAATGATATTTAGCAACCAGTTTGCAGGTCCCATCCCCCCCAAAATAGGAAAGCTCCCCAAATTATATCAAGTTGGTATGGCCATGAACTCTCTCTCTGGGAATGTTCCATCCTCTTTCGGAAATTTAAGTCGATTAACTAATCTATATCTAGAGGATAACAACCTTCAAGGCAGCATCCCTTCAAGTTTGGCCGAGTGTCACAACTTGGAGATCTTATCTCTTAGCAGAAACAATTTAAGTGGTACCATATCTCCTGAAGTCATTGGTGGTCTGTCTTCTTCGTATATTTTTGTGGATTTATCTCGAAATCATTTTACTGGCTTTGTTCCCAAGGAAGTCGGACATTTGATAAATCTAGAGCATTTTGATGTTTCCGGAAACATGTTATCTGGTGAGATTCCAGCAAGTCTTGGAAGTTGCAAAATCATACAATATCTTGACATGCAAGAAAACTTCTTCCAAGGGACAATTCCATCAGATATGAGTTCACTAAGAGGTATTGAATTCTTATCTCTCGCTCGCAACAACTTGTCAGGCACAATTCCAAAATTCTTGGAGCAATTTACATTTCTACAATCTTTGAATTTGTCTTATAACAATTTAGAGGGAGTCATACCAACTAAAGGAGTTTTTCAGAATGCAACTGCCACATCAGTCCAAGGGAATACAAAGCTCTGTGGGGGCATACCAGAGTTTAAATTGCCAAAATGCAAATTTCGACATTCCAGCAAGAGAGGGTTGAGCCTAACCTTGAAACTGATAATCTCTCTCCTTTGTGGGCTTTCTGGAGTCACTTTTTCATTGGCGTTTTTGTACGTTTGTTGCTTTCAGAGGGTAAAGAAGGAGCATCCTTCAAGTGATTCTGAAATTTTTCCAAAGATGTCTTACCAAAGTCTTCTTAAAGCTACTGACGGATTCTCTTCTGCCAACTTGATTGGTACAGGAAGTTTTGGGTCAGTTTACAAAGGATTACTTGATCAAGGGGAAACAATCATTGCCATCAAGGTACTCAACCTTTTTGCTCATGGGGCTTCCAAAAGTTTTACAGCCGAGTGTGAGGCCTTGAAAAATATTAGACACCGCAACCTTGTGAAGGTACTTTCTACATGCTCAGGATCTGACTATCGTGGTTGTGATTTTAAGGCTTTAATTTATGAGTACATGGTGAATGGGAGCTTAGATGAATGGTTGCATCCAACTCAGACAAGTATTGAGACGAATGAGAGGCCACAGAGCTTAACTTTTTCTCAGAGGTTGAACATTGCTATGGATGTTGCAATGGCATTGGATTATCTCCATCATCAGTGTCACGTGCCAATAGTTCATTGTGACCTTAAACCCAGCAATGTTCTTCTCAATGATGATATGATTGGACATGTAGGTGACTTTGGGTTGGCGAGATTCCTTCCAAAAACTCCTGAAGATGGTTTTGGTAATCAATCAAGCTCCATCGAAGTAAAAGGAACAATCGGGTATACTCCTCCAGAGTATGGTATGGGACATGAAGTGTGGACACAAGGTGACGTGTACAGTTACGGCATCCTCTTGCTGGAAATGTTTACTGGAAAGAGGCCAACCAGTGACTTGTTTCAAGGAACTTCAAATCTCCACAACTTTGTCAAGGCAGCTCTGCCTAAGCACGTGGTAGAGATTGTGGATCCTGTTCTTGTTCAGGAAAAAGAGGAAGGGGAGACGAGCGCAGACCAATGTTTTACTAAGGCTAGCACAAAGATCCACATCAAATTTGAAGAAGGCTTGATTTCAATTTTGGAAATCGGCCTTGCCTGCTCTGCAGAGTTGCCTAGAGAAAGATTGGACATCACTGATGCTGTGGCTGAGATGTATTCAAGTCTTAGAGTTATACATAGCGATTTGAAACCGAGCAATATCCTATTAGTTGTTAATATGAATCCAAAAATATCATACCTTGGGATGGCCAGGATGTTTGGAGTTGATGATGAAATTGAAGGAAACACAAGAAGAGTTGCTGGGCAGTTGTGGAATCAAGGGAAAGGGTTGAAGCTGATGGATCCCTTGTTCAAAGATTCATGCAGCGCTGACGAATTTTCGAGACACATCCATATCGGATTTTTATTTGTTAATGTTATTAAACGAATATGGCATGGCAAGAAGATCGATCCCGTATGA

Protein Analysis

1120

Amino Acids

123.4

Weight (kDa)

6.94

Isoelectric Point (pI)

34.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 74 2.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 83 - 187 4.2e-08 Leucine-rich repeat region
LRR_8 PF13855 432 - 483 5.4e-07 Leucine rich repeat
Pkinase PF00069 712 - 934 3.2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 714 - 933 5.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 984, 1806
Acc16I TGCGCA 1 cut(s) 380
Acc36I ACCTGC 1 cut(s) 1226
Acc65I GGTACC 1 cut(s) 1454
AccB1I GGYRCC 2 cut(s) 515, 1454
AccB7I CCANNNNNTGG 3 cut(s) 296, 368, 2702
AccI GTMKAC 2 cut(s) 661, 2687
AccIII TCCGGA 1 cut(s) 1586
AciI CCGC 7 cut(s) 229, 259, 346, 373, 432, 999, 2293
AclI AACGTT 1 cut(s) 391
AcoI YGGCCR 4 cut(s) 370, 1290, 1401, 3147
AcuI CTGAAG 2 cut(s) 1488, 2652
AcvI CACGTG 2 cut(s) 2524, 2854
AdeI CACNNNGTG 1 cut(s) 2732
AfaI GTAC 9 cut(s) 209, 1093, 1456, 2027, 2152, 2220, 2310, 2372, 2741
AfeI AGCGCT 1 cut(s) 3268
AfiI CCNNNNNNNGG 9 cut(s) 296, 368, 1256, 1835, 2305, 2636, 2702, 2761, 3145
AflIII ACRYGT 5 cut(s) 218, 292, 1593, 2587, 2736
AjiI CACGTC 1 cut(s) 2737
AjnI CCWGG 3 cut(s) 140, 1200, 3149
AjuI GAANNNNNNNTTGG 4 cut(s) 1665, 1697, 2625, 2657
AloI GAACNNNNNNTCC 2 cut(s) 3233, 3265
Alw26I GTCTC 5 cut(s) 101, 332, 2420, 2897, 3277
AlwNI CAGNNNCTG 1 cut(s) 2330
Ama87I CYCGRG 1 cut(s) 962
Aor13HI TCCGGA 1 cut(s) 1586
Aor51HI AGCGCT 1 cut(s) 3268
ApeKI GCWGC 5 cut(s) 385, 758, 1383, 2837, 3264
Asp700I GAANNNNTTC 2 cut(s) 848, 2082
Asp718I GGTACC 1 cut(s) 1454
AspLEI GCGC 3 cut(s) 381, 2912, 3269
AspS9I GGNCC 2 cut(s) 261, 1238
AsuHPI GGTGA 7 cut(s) 218, 279, 1022, 1616, 2389, 2606, 2744
AsuNHI GCTAGC 1 cut(s) 2933
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 2 cut(s) 261, 1238
AxyI CCTNAGG 1 cut(s) 504
BalI TGGCCA 2 cut(s) 1292, 3149
BamHI GGATCC 2 cut(s) 2869, 3241
BanI GGYRCC 2 cut(s) 515, 1454
BarI GAAGNNNNNNTAC 4 cut(s) 157, 189, 703, 735
BbrPI CACGTG 2 cut(s) 2524, 2854
BbsI GAAGAC 2 cut(s) 1479, 2099
BbvI GCAGC 5 cut(s) 372, 745, 1395, 2849, 3276
BceAI ACGGC 2 cut(s) 746, 2764
BcgI CGANNNNNNTGC 3 cut(s) 737, 771, 3328
BciT130I CCWGG 3 cut(s) 142, 1202, 3151
BciVI GTATCC 1 cut(s) 509
BclI TGATCA 1 cut(s) 2188
BcoDI GTCTC 5 cut(s) 101, 332, 2420, 2897, 3277
BfaI CTAG 5 cut(s) 902, 1361, 1568, 2934, 3015
BfmI CTRYAG 2 cut(s) 1143, 3003
BfoI RGCGCY 1 cut(s) 3270
BfuAI ACCTGC 1 cut(s) 1226
BfuI GTATCC 1 cut(s) 509
BglII AGATCT 1 cut(s) 1422
BisI GCNGC 6 cut(s) 373, 386, 759, 1384, 2838, 3265
BlsI GCNGC 6 cut(s) 374, 387, 760, 1385, 2839, 3266
Bme1390I CCNGG 3 cut(s) 142, 1202, 3151
Bme18I GGWCC 2 cut(s) 261, 1238
BmeT110I CYCGRG 1 cut(s) 962
BmgBI CACGTC 1 cut(s) 2737
BmgT120I GGNCC 2 cut(s) 261, 1238
BmiI GGNNCC 5 cut(s) 517, 1240, 1456, 2871, 3243
BmrFI CCNGG 3 cut(s) 142, 1202, 3151
BmsI GCATC 6 cut(s) 60, 1395, 2068, 2413, 2760, 3028
BmtI GCTAGC 1 cut(s) 2937
BpiI GAAGAC 2 cut(s) 1479, 2099
BpmI CTGGAG 3 cut(s) 345, 2019, 2679
Bpu10I CCTNAGC 2 cut(s) 2323, 2847
BpuEI CTTGAG 1 cut(s) 1039
Bsa29I ATCGAT 1 cut(s) 3348
BsaAI YACGTR 2 cut(s) 2524, 2854
BsaBI GATNNNNATC 1 cut(s) 2948
BsaJI CCNNGG 4 cut(s) 1542, 1672, 1870, 3139
BsaWI WCCGGW 2 cut(s) 462, 1586
BsaXI ACNNNNNCTCC 2 cut(s) 1447, 1477
Bsc4I CCNNNNNNNGG 9 cut(s) 296, 368, 1256, 1835, 2305, 2636, 2702, 2761, 3145
Bse1I ACTGG 6 cut(s) 123, 150, 1228, 1534, 2779, 2790
Bse21I CCTNAGG 1 cut(s) 504
Bse3DI GCAATG 5 cut(s) 804, 2205, 2472, 2496, 2563
Bse8I GATNNNNATC 1 cut(s) 2948
BseAI TCCGGA 1 cut(s) 1586
BseBI CCWGG 3 cut(s) 142, 1202, 3151
BseCI ATCGAT 1 cut(s) 3348
BseDI CCNNGG 4 cut(s) 1542, 1672, 1870, 3139
BseJI GATNNNNATC 1 cut(s) 2948
BseLI CCNNNNNNNGG 9 cut(s) 296, 368, 1256, 1835, 2305, 2636, 2702, 2761, 3145
BseMI GCAATG 5 cut(s) 804, 2205, 2472, 2496, 2563
BseMII CTCAG 6 cut(s) 328, 738, 2337, 2426, 2474, 3039
BseNI ACTGG 6 cut(s) 123, 150, 1228, 1534, 2779, 2790
BseRI GAGGAG 1 cut(s) 2682
BseXI GCAGC 5 cut(s) 372, 745, 1395, 2849, 3276
BseYI CCCAGC 2 cut(s) 2552, 3200
BshNI GGYRCC 2 cut(s) 515, 1454
BshVI ATCGAT 1 cut(s) 3348
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 3 cut(s) 96, 463, 1587
BslFI GGGAC 3 cut(s) 1224, 1690, 2724
BslI CCNNNNNNNGG 9 cut(s) 296, 368, 1256, 1835, 2305, 2636, 2702, 2761, 3145
BsmAI GTCTC 5 cut(s) 101, 332, 2420, 2897, 3277
BsmBI CGTCTC 2 cut(s) 2420, 2897
BsmFI GGGAC 3 cut(s) 1224, 1690, 2724
BsmI GAATGC 1 cut(s) 1855
BsoBI CYCGRG 1 cut(s) 962
Bsp13I TCCGGA 1 cut(s) 1586
Bsp1407I TGTACA 1 cut(s) 2739
BspACI CCGC 7 cut(s) 229, 259, 346, 373, 432, 999, 2293
BspCNI CTCAG 6 cut(s) 327, 737, 2336, 2425, 2473, 3040
BspDI ATCGAT 1 cut(s) 3348
BspEI TCCGGA 1 cut(s) 1586
BspHI TCATGA 1 cut(s) 168
BspLI GGNNCC 5 cut(s) 517, 1240, 1456, 2871, 3243
BspMAI CTGCAG 1 cut(s) 3007
BspMI ACCTGC 1 cut(s) 1226
BspOI GCTAGC 1 cut(s) 2937
BspT107I GGYRCC 2 cut(s) 515, 1454
BsrDI GCAATG 5 cut(s) 804, 2205, 2472, 2496, 2563
BsrGI TGTACA 1 cut(s) 2739
BsrI ACTGG 6 cut(s) 123, 150, 1228, 1534, 2779, 2790
BssECI CCNNGG 4 cut(s) 1542, 1672, 1870, 3139
BssNAI GTATAC 1 cut(s) 2688
BssT1I CCWWGG 4 cut(s) 1542, 1672, 1870, 3139
Bst1107I GTATAC 1 cut(s) 2688
Bst2UI CCWGG 3 cut(s) 142, 1202, 3151
Bst4CI ACNGT 2 cut(s) 212, 2744
Bst6I CTCTTC 3 cut(s) 745, 2137, 3187
BstAUI TGTACA 1 cut(s) 2739
BstBAI YACGTR 2 cut(s) 2524, 2854
BstC8I GCNNGC 5 cut(s) 377, 383, 1732, 2935, 2998
BstEII GGTNACC 1 cut(s) 224
BstENI CCTNNNNNAGG 1 cut(s) 2303
BstH2I RGCGCY 1 cut(s) 3270
BstHHI GCGC 3 cut(s) 381, 2912, 3269
BstMAI GTCTC 5 cut(s) 101, 332, 2420, 2897, 3277
BstMWI GCNNNNNNNGC 6 cut(s) 378, 385, 1029, 2240, 2997, 3002
BstNI CCWGG 3 cut(s) 142, 1202, 3151
BstNSI RCATGY 7 cut(s) 222, 296, 379, 1597, 1657, 2322, 2591
BstPI GGTNACC 1 cut(s) 224
BstSCI CCNGG 3 cut(s) 140, 1200, 3149
BstSFI CTRYAG 2 cut(s) 1143, 3003
BstV1I GCAGC 5 cut(s) 372, 745, 1395, 2849, 3276
BstV2I GAAGAC 2 cut(s) 1479, 2099
BstX2I RGATCY 6 cut(s) 911, 1422, 2327, 2869, 2943, 3241
BstYI RGATCY 6 cut(s) 911, 1422, 2327, 2869, 2943, 3241
BstZ17I GTATAC 1 cut(s) 2688
Bsu15I ATCGAT 1 cut(s) 3348
Bsu36I CCTNAGG 1 cut(s) 504
BsuI GTATCC 1 cut(s) 509
BsuTUI ATCGAT 1 cut(s) 3348
BtrI CACGTC 1 cut(s) 2737
BtsIMutI CAGTG 5 cut(s) 157, 859, 2522, 2797, 3033
BveI ACCTGC 1 cut(s) 1226
Cac8I GCNNGC 5 cut(s) 377, 383, 1732, 2935, 2998
CaiI CAGNNNCTG 1 cut(s) 2330
CciI TCATGA 1 cut(s) 168
CfoI GCGC 3 cut(s) 381, 2912, 3269
Cfr13I GGNCC 2 cut(s) 261, 1238
ClaI ATCGAT 1 cut(s) 3348
Csp6I GTAC 9 cut(s) 208, 1092, 1455, 2026, 2151, 2219, 2309, 2371, 2740
CspCI CAANNNNNGTGG 4 cut(s) 1069, 1104, 1432, 1467
CviQI GTAC 9 cut(s) 208, 1092, 1455, 2026, 2151, 2219, 2309, 2371, 2740
DraI TTTAAA 1 cut(s) 1909
DraIII CACNNNGTG 1 cut(s) 2732
EaeI YGGCCR 4 cut(s) 370, 1290, 1401, 3147
Eam1104I CTCTTC 3 cut(s) 745, 2137, 3187
EarI CTCTTC 3 cut(s) 745, 2137, 3187
EciI GGCGGA 1 cut(s) 335
Eco130I CCWWGG 4 cut(s) 1542, 1672, 1870, 3139
Eco147I AGGCCT 2 cut(s) 90, 2273
Eco32I GATATC 1 cut(s) 652
Eco47I GGWCC 2 cut(s) 261, 1238
Eco47III AGCGCT 1 cut(s) 3268
Eco57I CTGAAG 2 cut(s) 1488, 2652
Eco72I CACGTG 2 cut(s) 2524, 2854
Eco81I CCTNAGG 1 cut(s) 504
Eco88I CYCGRG 1 cut(s) 962
Eco91I GGTNACC 1 cut(s) 224
EcoNI CCTNNNNNAGG 1 cut(s) 2303
EcoO109I RGGNCCY 1 cut(s) 1238
EcoO65I GGTNACC 1 cut(s) 224
EcoRI GAATTC 2 cut(s) 131, 1715
EcoRII CCWGG 3 cut(s) 140, 1200, 3149
EcoRV GATATC 1 cut(s) 652
EcoT14I CCWWGG 4 cut(s) 1542, 1672, 1870, 3139
EcoT22I ATGCAT 1 cut(s) 1109
ErhI CCWWGG 4 cut(s) 1542, 1672, 1870, 3139
Esp3I CGTCTC 2 cut(s) 2420, 2897
FalI AAGNNNNNCTT 2 cut(s) 2169, 2201
FaqI GGGAC 3 cut(s) 1224, 1690, 2724
FauI CCCGC 2 cut(s) 439, 992
FbaI TGATCA 1 cut(s) 2188
FblI GTMKAC 2 cut(s) 661, 2687
Fnu4HI GCNGC 6 cut(s) 373, 386, 759, 1384, 2838, 3265
Fsp4HI GCNGC 6 cut(s) 373, 386, 759, 1384, 2838, 3265
FspBI CTAG 5 cut(s) 902, 1361, 1568, 2934, 3015
FspI TGCGCA 1 cut(s) 380
GlaI GCGC 3 cut(s) 380, 2911, 3268
GluI GCNGC 6 cut(s) 373, 386, 759, 1384, 2838, 3265
GsaI CCCAGC 2 cut(s) 2556, 3204
GsuI CTGGAG 3 cut(s) 345, 2019, 2679
HaeII RGCGCY 1 cut(s) 3270
HapII CCGG 3 cut(s) 96, 463, 1587
HhaI GCGC 3 cut(s) 381, 2912, 3269
Hin6I GCGC 3 cut(s) 379, 2910, 3267
HinP1I GCGC 3 cut(s) 379, 2910, 3267
HincII GTYRAC 1 cut(s) 662
HindII GTYRAC 1 cut(s) 662
HpaII CCGG 3 cut(s) 96, 463, 1587
HphI GGTGA 7 cut(s) 218, 279, 1022, 1616, 2389, 2606, 2744
Hpy166II GTNNAC 7 cut(s) 662, 1700, 2173, 2688, 2724, 2740, 2772
Hpy8I GTNNAC 7 cut(s) 662, 1700, 2173, 2688, 2724, 2740, 2772
HpyCH4III ACNGT 2 cut(s) 212, 2744
HpyCH4IV ACGT 6 cut(s) 391, 1094, 2028, 2523, 2736, 2853
HpyF10VI GCNNNNNNNGC 6 cut(s) 378, 385, 1029, 2240, 2997, 3002
HpySE526I ACGT 6 cut(s) 391, 1094, 2028, 2523, 2736, 2853
HspAI GCGC 3 cut(s) 379, 2910, 3267
Kpn2I TCCGGA 1 cut(s) 1586
KpnI GGTACC 1 cut(s) 1458
Ksp22I TGATCA 1 cut(s) 2188
LmnI GCTCC 6 cut(s) 508, 1269, 1768, 2056, 2385, 2663
Lsp1109I GCAGC 5 cut(s) 372, 745, 1395, 2849, 3276
LweI GCATC 6 cut(s) 60, 1395, 2068, 2413, 2760, 3028
MaeI CTAG 5 cut(s) 902, 1361, 1568, 2934, 3015
MaeII ACGT 6 cut(s) 391, 1094, 2028, 2523, 2736, 2853
MfeI CAATTG 1 cut(s) 920
MflI RGATCY 6 cut(s) 911, 1422, 2327, 2869, 2943, 3241
MlsI TGGCCA 2 cut(s) 1292, 3149
MluNI TGGCCA 2 cut(s) 1292, 3149
MlyI GAGTC 3 cut(s) 900, 1830, 2010
MmeI TCCRAC 3 cut(s) 277, 1531, 2432
Mox20I TGGCCA 2 cut(s) 1292, 3149
Mph1103I ATGCAT 1 cut(s) 1109
MroI TCCGGA 1 cut(s) 1586
MroXI GAANNNNTTC 2 cut(s) 848, 2082
MscI TGGCCA 2 cut(s) 1292, 3149
MslI CAYNNNNRTG 3 cut(s) 1578, 2477, 2592
Msp20I TGGCCA 2 cut(s) 1292, 3149
MspI CCGG 3 cut(s) 96, 463, 1587
MspR9I CCNGG 3 cut(s) 142, 1202, 3151
MunI CAATTG 1 cut(s) 920
Mva1269I GAATGC 1 cut(s) 1855
MvaI CCWGG 3 cut(s) 142, 1202, 3151
MwoI GCNNNNNNNGC 6 cut(s) 378, 385, 1029, 2240, 2997, 3002
NheI GCTAGC 1 cut(s) 2933
NlaIV GGNNCC 5 cut(s) 517, 1240, 1456, 2871, 3243
NmeAIII GCCGAG 3 cut(s) 1174, 1429, 2287
NmuCI GTSAC 9 cut(s) 152, 224, 1409, 2002, 2519, 2540, 2594, 2732, 2792
NsbI TGCGCA 1 cut(s) 380
NsiI ATGCAT 1 cut(s) 1109
NspI RCATGY 7 cut(s) 222, 296, 379, 1597, 1657, 2322, 2591
PaeI GCATGC 1 cut(s) 379
PagI TCATGA 1 cut(s) 168
PceI AGGCCT 2 cut(s) 90, 2273
PciI ACATGT 4 cut(s) 218, 292, 1593, 2587
PctI GAATGC 1 cut(s) 1855
PdmI GAANNNNTTC 2 cut(s) 848, 2082
PfeI GAWTC 9 cut(s) 570, 844, 1609, 2072, 2127, 2613, 3121, 3214, 3257
PflMI CCANNNNNTGG 3 cut(s) 296, 368, 2702
PkrI GCNGC 6 cut(s) 374, 387, 760, 1385, 2839, 3266
PleI GAGTC 3 cut(s) 900, 1829, 2009
PmaCI CACGTG 2 cut(s) 2524, 2854
PmlI CACGTG 2 cut(s) 2524, 2854
PpsI GAGTC 3 cut(s) 900, 1829, 2009
Ppu21I YACGTR 2 cut(s) 2524, 2854
PpuMI RGGWCCY 1 cut(s) 1238
PscI ACATGT 4 cut(s) 218, 292, 1593, 2587
PsiI TTATAA 2 cut(s) 984, 1806
Psp1406I AACGTT 1 cut(s) 391
Psp5II RGGWCCY 1 cut(s) 1238
Psp6I CCWGG 3 cut(s) 140, 1200, 3149
PspCI CACGTG 2 cut(s) 2524, 2854
PspEI GGTNACC 1 cut(s) 224
PspFI CCCAGC 2 cut(s) 2552, 3200
PspGI CCWGG 3 cut(s) 140, 1200, 3149
PspN4I GGNNCC 5 cut(s) 517, 1240, 1456, 2871, 3243
PspPI GGNCC 2 cut(s) 261, 1238
PspPPI RGGWCCY 1 cut(s) 1238
PstI CTGCAG 1 cut(s) 3007
PstNI CAGNNNCTG 1 cut(s) 2330
PsuI RGATCY 6 cut(s) 911, 1422, 2327, 2869, 2943, 3241
RsaI GTAC 9 cut(s) 209, 1093, 1456, 2027, 2152, 2220, 2310, 2372, 2741
RsaNI GTAC 9 cut(s) 208, 1092, 1455, 2026, 2151, 2219, 2309, 2371, 2740
RseI CAYNNNNRTG 3 cut(s) 1578, 2477, 2592
SalI GTCGAC 1 cut(s) 660
SatI GCNGC 6 cut(s) 373, 386, 759, 1384, 2838, 3265
Sau96I GGNCC 2 cut(s) 261, 1238
SchI GAGTC 3 cut(s) 900, 1830, 2010
ScrFI CCNGG 3 cut(s) 142, 1202, 3151
SfaNI GCATC 6 cut(s) 60, 1395, 2068, 2413, 2760, 3028
SfcI CTRYAG 2 cut(s) 1143, 3003
SinI GGWCC 2 cut(s) 261, 1238
SmiMI CAYNNNNRTG 3 cut(s) 1578, 2477, 2592
SmlI CTYRAG 1 cut(s) 1018
SmoI CTYRAG 1 cut(s) 1018
SphI GCATGC 1 cut(s) 379
SseBI AGGCCT 2 cut(s) 90, 2273
SsiI CCGC 7 cut(s) 229, 259, 346, 373, 432, 999, 2293
SspI AATATT 1 cut(s) 2284
SspMI CTAG 5 cut(s) 902, 1361, 1568, 2934, 3015
StuI AGGCCT 2 cut(s) 90, 2273
StyD4I CCNGG 3 cut(s) 140, 1200, 3149
StyI CCWWGG 4 cut(s) 1542, 1672, 1870, 3139
TaaI ACNGT 2 cut(s) 212, 2744
TaiI ACGT 6 cut(s) 394, 1097, 2031, 2526, 2739, 2856
TaqI TCGA 8 cut(s) 661, 747, 1342, 1516, 1930, 2664, 3281, 3348
TatI WGTACW 2 cut(s) 2370, 2739
TauI GCSGC 1 cut(s) 375
TfiI GAWTC 9 cut(s) 570, 844, 1609, 2072, 2127, 2613, 3121, 3214, 3257
TscAI CASTG 5 cut(s) 157, 859, 2522, 2797, 3040
TseFI GTSAC 9 cut(s) 152, 224, 1409, 2002, 2519, 2540, 2594, 2732, 2792
TseI GCWGC 5 cut(s) 385, 758, 1383, 2837, 3264
Tsp45I GTSAC 9 cut(s) 152, 224, 1409, 2002, 2519, 2540, 2594, 2732, 2792
TspGWI ACGGA 1 cut(s) 2139
TspRI CASTG 5 cut(s) 157, 859, 2522, 2797, 3040
Van91I CCANNNNNTGG 3 cut(s) 296, 368, 2702
VpaK11BI GGWCC 2 cut(s) 261, 1238
XagI CCTNNNNNAGG 1 cut(s) 2303
XbaI TCTAGA 2 cut(s) 1360, 1567
XceI RCATGY 7 cut(s) 222, 296, 379, 1597, 1657, 2322, 2591
XmiI GTMKAC 2 cut(s) 661, 2687
XmnI GAANNNNTTC 2 cut(s) 848, 2082
XspI CTAG 5 cut(s) 902, 1361, 1568, 2934, 3015
Zsp2I ATGCAT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.