Rroxscaffold_6G00416590
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Reverse (-)
38585366 .. 38586838
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00416590.1

Sequence Viewer

Length: 1473 bp
ATGTCCAACTTCTCAAACCAACTTGTGTCACTGAGACTGGGAAGAAACCAATTATCTGGAAGCTTCCCTACGGGAATATTTGAGAACCTTGTTAATCTGACAGAACTGATGATGGAGAAGAACAATTTCAGTGGTGGGATTCCTGCCCTTATTGGTAACCTCTGGATGCTGCGACGATTAGATTTATCTGCAAATGAGTTTTCTGGCCAAATTCCATCATCCATAGCCAATATGAGTCAATTGTATGCTCTCTATCTTCAAAACAATCATTTCACAGGTTCTATTCCTTCAAGTTTTGGGAACCTTTCAAACTTGCAAGACCTAGACCTTTCTCAGAATTATCTCAATGGAATCATACCAGAAAAAGTTATGAGCCTTTCTTCTCTGACCATTTCCCTAAACCTTTCTCAAAACCGATTGACCGGTTCCTTGCCCTCAAAAGTTGGAGACTTGAAAAATCTAGGGAACTTGGATCTTTCTGAGAATATATTGTCAGGCGAAATTCCCAGTAGCCTTGCTAGTTGTGTATCCTTAGAACACCTTCACTTGGAAGGTAACTTTTTTGAAGGAACCATTCCTTCATCTTTTAGATCCTTGAGAGGTCTTCAAGACTTGGATCTTTCGAATAACAACTTATCTGGCCAAATTCCTGAATTTTTTCAACTTATTTCCCTAGTGAACTTAAATCTTTCCTTCAACAATTTTGAGGGTCAAGTGCCAACAGGAGGAGTTTTCAAAAATGCAACTGTCACTTCAATAGCAGGAAATGGAAAGCTTTGTGGAGGCATACCTGAATTTCAATTGCCGGTTTGCACTGCTACTAAGCCAAAGAAAAGAAAGATGTCTCAAGGACTGAAATTCATGATCTTATTGCTTTCTGGACTTTTGGGGTTAGTTTTGATCATGTCTCTTCTAGTTATTTATCGGTTAAGGAAGGCCAAAACACCACCCTCTACAGAAGCTTCACCAACCAAGGAATTGCATTTGAAGATATCCTATGAAACTCTCGTTCAAGCTACCGGAGGATTTTCTCCTACCAACCTAATTGGTTCTGGTAGCTTTGGTTCTGTCTACAAAGGGATTCTTGATGAAGTAGTCGTGGCAGTAAAGGTACTCTACTTATATCAACCAGGTGCTCTAAAAAGCTTCTCAGCTGAATGTGAAGCCTTGAGAAGTATTCGGCACCGGAATCTTGTGAAAGTCTTAACTGCCTGCTCAAGCATTGATTTTCAAGGTAATGAGTTTAAAGCTCTTGTCTATGAGTATATGCCAAATGGGAGTCTGGAGAGTTGGCTACATCCACTTTCAGAAGCTGATGACTTAAATGGTGACTTGAGGATGCTTAGTCTTCTACAAAGATTGAACATTGCCATTGATGTGGCATCAGCTCTGGATTATCTTCATCACCATTGCGAAGATCAGATCGTTCACTGTGATCTGAAGCCAAGCAATATCTACTCGACAATAATATGA

Protein Analysis

490

Amino Acids

53.57

Weight (kDa)

6.22

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 11 - 113 2.6e-09 Leucine-rich repeat region
LRR_8 PF13855 80 - 140 1.9e-10 Leucine rich repeat
LRR_8 PF13855 132 - 186 8.8e-06 Leucine rich repeat
LRR_14 PF23598 133 - 234 8.7e-07 Leucine-rich repeat region
LRR_8 PF13855 177 - 235 3.7e-07 Leucine rich repeat
Pkinase PF00069 346 - 485 5.8e-19 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 485 1.6e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1182
AccI GTMKAC 1 cut(s) 1071
AclWI GGATC 3 cut(s) 480, 585, 624
AcoI YGGCCR 2 cut(s) 205, 640
AcsI RAATTY 6 cut(s) 210, 501, 645, 653, 794, 857
AcuI CTGAAG 1 cut(s) 1460
AfaI GTAC 1 cut(s) 1113
AfiI CCNNNNNNNGG 2 cut(s) 547, 725
AgeI ACCGGT 1 cut(s) 422
AjnI CCWGG 1 cut(s) 1129
Alw21I GWGCWC 1 cut(s) 1138
Alw26I GTCTC 4 cut(s) 28, 441, 849, 912
AlwI GGATC 3 cut(s) 480, 585, 624
AlwNI CAGNNNCTG 1 cut(s) 1313
AoxI GGCC 3 cut(s) 205, 640, 936
ApeKI GCWGC 1 cut(s) 169
ApoI RAATTY 6 cut(s) 210, 501, 645, 653, 794, 857
AsiGI ACCGGT 1 cut(s) 422
Asp700I GAANNNNTTC 3 cut(s) 125, 540, 657
AsuHPI GGTGA 3 cut(s) 957, 1340, 1397
AsuII TTCGAA 1 cut(s) 623
BalI TGGCCA 2 cut(s) 207, 642
BanI GGYRCC 1 cut(s) 1182
BarI GAAGNNNNNNTAC 2 cut(s) 52, 84
BbsI GAAGAC 2 cut(s) 596, 1340
Bbv12I GWGCWC 1 cut(s) 1138
BbvI GCAGC 1 cut(s) 156
BccI CCATC 2 cut(s) 106, 223
BciT130I CCWGG 1 cut(s) 1131
BciVI GTATCC 1 cut(s) 538
BclI TGATCA 1 cut(s) 900
BcoDI GTCTC 4 cut(s) 28, 441, 849, 912
BfaI CTAG 5 cut(s) 323, 461, 519, 674, 914
BfmI CTRYAG 1 cut(s) 954
BfuI GTATCC 1 cut(s) 538
BisI GCNGC 1 cut(s) 170
BlsI GCNGC 1 cut(s) 171
Bme1390I CCNGG 1 cut(s) 1131
BmiI GGNNCC 4 cut(s) 302, 427, 571, 1184
BmrFI CCNGG 1 cut(s) 1131
BmrI ACTGGG 2 cut(s) 47, 501
BmsI GCATC 3 cut(s) 156, 1329, 1391
BmuI ACTGGG 2 cut(s) 47, 501
BpiI GAAGAC 2 cut(s) 596, 1340
BpmI CTGGAG 1 cut(s) 1304
Bpu14I TTCGAA 1 cut(s) 623
BpuEI CTTGAG 5 cut(s) 616, 831, 1189, 1201, 1354
BsaJI CCNNGG 1 cut(s) 972
BsaWI WCCGGW 3 cut(s) 422, 1019, 1185
Bsc4I CCNNNNNNNGG 2 cut(s) 547, 725
Bse118I RCCGGY 2 cut(s) 422, 805
Bse1I ACTGG 2 cut(s) 42, 507
Bse3DI GCAATG 2 cut(s) 1365, 1408
BseBI CCWGG 1 cut(s) 1131
BseDI CCNNGG 1 cut(s) 972
BseGI GGATG 4 cut(s) 171, 218, 1297, 1344
BseLI CCNNNNNNNGG 2 cut(s) 547, 725
BseMI GCAATG 2 cut(s) 1365, 1408
BseMII CTCAG 4 cut(s) 23, 347, 471, 1164
BseNI ACTGG 2 cut(s) 42, 507
BseRI GAGGAG 1 cut(s) 741
BseXI GCAGC 1 cut(s) 156
BshFI GGCC 3 cut(s) 207, 642, 938
BshNI GGYRCC 1 cut(s) 1182
BshTI ACCGGT 1 cut(s) 422
BsiHKAI GWGCWC 1 cut(s) 1138
BsiSI CCGG 4 cut(s) 423, 806, 1020, 1186
BslI CCNNNNNNNGG 2 cut(s) 547, 725
BsmAI GTCTC 4 cut(s) 28, 441, 849, 912
BsnI GGCC 3 cut(s) 207, 642, 938
Bsp119I TTCGAA 1 cut(s) 623
Bsp1286I GDGCHC 1 cut(s) 1138
Bsp143I GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
BspANI GGCC 3 cut(s) 207, 642, 938
BspCNI CTCAG 4 cut(s) 24, 346, 472, 1163
BspHI TCATGA 1 cut(s) 861
BspLI GGNNCC 4 cut(s) 302, 427, 571, 1184
BspPI GGATC 3 cut(s) 480, 585, 624
BspT104I TTCGAA 1 cut(s) 623
BspT107I GGYRCC 1 cut(s) 1182
BsrDI GCAATG 2 cut(s) 1365, 1408
BsrFI RCCGGY 2 cut(s) 422, 805
BsrI ACTGG 2 cut(s) 42, 507
BssAI RCCGGY 2 cut(s) 422, 805
BssECI CCNNGG 1 cut(s) 972
BssMI GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
BssT1I CCWWGG 1 cut(s) 972
Bst2UI CCWGG 1 cut(s) 1131
Bst4CI ACNGT 2 cut(s) 748, 1433
Bst6I CTCTTC 1 cut(s) 915
BstBI TTCGAA 1 cut(s) 623
BstC8I GCNNGC 1 cut(s) 1213
BstDEI CTNAG 7 cut(s) 32, 333, 480, 532, 822, 1150, 1343
BstEII GGTNACC 1 cut(s) 155
BstF5I GGATG 4 cut(s) 171, 218, 1297, 1344
BstKTI GATC 8 cut(s) 475, 593, 619, 867, 903, 1420, 1425, 1438
BstMAI GTCTC 4 cut(s) 28, 441, 849, 912
BstMBI GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
BstNI CCWGG 1 cut(s) 1131
BstPI GGTNACC 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 1129
BstSFI CTRYAG 1 cut(s) 954
BstV1I GCAGC 1 cut(s) 156
BstV2I GAAGAC 2 cut(s) 596, 1340
BstX2I RGATCY 3 cut(s) 472, 590, 616
BstXI CCANNNNNNTGG 2 cut(s) 56, 1378
BstYI RGATCY 3 cut(s) 472, 590, 616
BsuI GTATCC 1 cut(s) 538
BsuRI GGCC 3 cut(s) 207, 642, 938
BtsCI GGATG 4 cut(s) 171, 218, 1297, 1344
BtsI GCAGTG 1 cut(s) 813
BtsIMutI CAGTG 4 cut(s) 29, 136, 813, 1429
Cac8I GCNNGC 1 cut(s) 1213
CaiI CAGNNNCTG 1 cut(s) 1313
CciI TCATGA 1 cut(s) 861
Cfr10I RCCGGY 2 cut(s) 422, 805
CsiI ACCWGGT 1 cut(s) 1129
Csp6I GTAC 1 cut(s) 1112
CspAI ACCGGT 1 cut(s) 422
CspCI CAANNNNNGTGG 2 cut(s) 112, 147
CviAII CATG 2 cut(s) 862, 904
CviQI GTAC 1 cut(s) 1112
DdeI CTNAG 7 cut(s) 32, 333, 480, 532, 822, 1150, 1343
DpnI GATC 8 cut(s) 474, 592, 618, 866, 902, 1419, 1424, 1437
DpnII GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
DraI TTTAAA 1 cut(s) 1246
EaeI YGGCCR 2 cut(s) 205, 640
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
Eco130I CCWWGG 1 cut(s) 972
Eco32I GATATC 1 cut(s) 993
Eco57I CTGAAG 1 cut(s) 1460
Eco91I GGTNACC 1 cut(s) 155
EcoO65I GGTNACC 1 cut(s) 155
EcoRII CCWGG 1 cut(s) 1129
EcoRV GATATC 1 cut(s) 993
EcoT14I CCWWGG 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 972
FaeI CATG 2 cut(s) 865, 907
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FatI CATG 2 cut(s) 861, 903
FbaI TGATCA 1 cut(s) 900
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 1 cut(s) 170
FokI GGATG 4 cut(s) 178, 205, 1284, 1351
Fsp4HI GCNGC 1 cut(s) 170
FspBI CTAG 5 cut(s) 323, 461, 519, 674, 914
GluI GCNGC 1 cut(s) 170
GsuI CTGGAG 1 cut(s) 1304
HaeIII GGCC 3 cut(s) 207, 642, 938
HapII CCGG 4 cut(s) 423, 806, 1020, 1186
Hin1II CATG 2 cut(s) 865, 907
HindIII AAGCTT 4 cut(s) 61, 773, 960, 1144
HinfI GANTC 6 cut(s) 139, 235, 351, 1081, 1189, 1279
HpaII CCGG 4 cut(s) 423, 806, 1020, 1186
HphI GGTGA 3 cut(s) 957, 1340, 1397
Hpy166II GTNNAC 3 cut(s) 679, 1072, 1429
Hpy188I TCNGA 7 cut(s) 99, 336, 387, 481, 1309, 1422, 1440
Hpy188III TCNNGA 9 cut(s) 57, 163, 608, 650, 862, 879, 1085, 1283, 1391
Hpy8I GTNNAC 3 cut(s) 679, 1072, 1429
Hpy99I CGWCG 1 cut(s) 177
HpyAV CCTTC 7 cut(s) 297, 545, 551, 560, 588, 703, 928
HpyCH4III ACNGT 2 cut(s) 748, 1433
HpyCH4V TGCA 5 cut(s) 191, 316, 743, 813, 982
HpyF3I CTNAG 7 cut(s) 32, 333, 480, 532, 822, 1150, 1343
Hsp92II CATG 2 cut(s) 865, 907
Ksp22I TGATCA 1 cut(s) 900
Kzo9I GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
Lsp1109I GCAGC 1 cut(s) 156
LweI GCATC 3 cut(s) 156, 1329, 1391
MabI ACCWGGT 1 cut(s) 1129
MaeI CTAG 5 cut(s) 323, 461, 519, 674, 914
MaeIII GTNAC 5 cut(s) 27, 155, 554, 748, 1328
MalI GATC 8 cut(s) 474, 592, 618, 866, 902, 1419, 1424, 1437
MboI GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
MfeI CAATTG 2 cut(s) 239, 800
MflI RGATCY 3 cut(s) 472, 590, 616
MhlI GDGCHC 1 cut(s) 1138
MlsI TGGCCA 2 cut(s) 207, 642
MluNI TGGCCA 2 cut(s) 207, 642
MlyI GAGTC 2 cut(s) 244, 1288
MmeI TCCRAC 2 cut(s) 30, 424
MnlI CCTC 9 cut(s) 170, 445, 593, 700, 719, 776, 961, 1016, 1329
Mox20I TGGCCA 2 cut(s) 207, 642
MroXI GAANNNNTTC 3 cut(s) 125, 540, 657
MscI TGGCCA 2 cut(s) 207, 642
MseI TTAA 6 cut(s) 93, 683, 929, 1205, 1245, 1322
MslI CAYNNNNRTG 1 cut(s) 1376
Msp20I TGGCCA 2 cut(s) 207, 642
MspA1I CMGCKG 1 cut(s) 1154
MspI CCGG 4 cut(s) 423, 806, 1020, 1186
MspR9I CCNGG 1 cut(s) 1131
MunI CAATTG 2 cut(s) 239, 800
MvaI CCWGG 1 cut(s) 1131
NdeII GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
NlaIII CATG 2 cut(s) 865, 907
NlaIV GGNNCC 4 cut(s) 302, 427, 571, 1184
NmuCI GTSAC 3 cut(s) 27, 748, 1328
NspV TTCGAA 1 cut(s) 623
PagI TCATGA 1 cut(s) 861
PdmI GAANNNNTTC 3 cut(s) 125, 540, 657
PfeI GAWTC 4 cut(s) 139, 351, 1081, 1189
PinAI ACCGGT 1 cut(s) 422
PkrI GCNGC 1 cut(s) 171
PleI GAGTC 2 cut(s) 243, 1287
PpsI GAGTC 2 cut(s) 243, 1287
Psp6I CCWGG 1 cut(s) 1129
PspEI GGTNACC 1 cut(s) 155
PspGI CCWGG 1 cut(s) 1129
PspN4I GGNNCC 4 cut(s) 302, 427, 571, 1184
PsrI GAACNNNNNNTAC 2 cut(s) 1048, 1080
PstNI CAGNNNCTG 1 cut(s) 1313
PsuI RGATCY 3 cut(s) 472, 590, 616
PvuII CAGCTG 1 cut(s) 1154
RsaI GTAC 1 cut(s) 1113
RsaNI GTAC 1 cut(s) 1112
RseI CAYNNNNRTG 1 cut(s) 1376
SaqAI TTAA 6 cut(s) 93, 683, 929, 1205, 1245, 1322
SatI GCNGC 1 cut(s) 170
Sau3AI GATC 8 cut(s) 472, 590, 616, 864, 900, 1417, 1422, 1435
SchI GAGTC 2 cut(s) 244, 1288
ScrFI CCNGG 1 cut(s) 1131
SduI GDGCHC 1 cut(s) 1138
SexAI ACCWGGT 1 cut(s) 1129
SfaNI GCATC 3 cut(s) 156, 1329, 1391
SfcI CTRYAG 1 cut(s) 954
SfuI TTCGAA 1 cut(s) 623
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 5 cut(s) 595, 846, 1168, 1216, 1333
SmoI CTYRAG 5 cut(s) 595, 846, 1168, 1216, 1333
SspI AATATT 1 cut(s) 78
SspMI CTAG 5 cut(s) 323, 461, 519, 674, 914
StyD4I CCNGG 1 cut(s) 1129
StyI CCWWGG 1 cut(s) 972
TaaI ACNGT 2 cut(s) 748, 1433
TaqI TCGA 2 cut(s) 623, 1460
TfiI GAWTC 4 cut(s) 139, 351, 1081, 1189
Tru1I TTAA 6 cut(s) 93, 683, 929, 1205, 1245, 1322
Tru9I TTAA 6 cut(s) 93, 683, 929, 1205, 1245, 1322
TscAI CASTG 4 cut(s) 36, 136, 820, 1436
TseFI GTSAC 3 cut(s) 27, 748, 1328
TseI GCWGC 1 cut(s) 169
Tsp45I GTSAC 3 cut(s) 27, 748, 1328
TspDTI ATGAA 5 cut(s) 570, 850, 1014, 1104, 1391
TspRI CASTG 4 cut(s) 36, 136, 820, 1436
XapI RAATTY 6 cut(s) 210, 501, 645, 653, 794, 857
XmiI GTMKAC 1 cut(s) 1071
XmnI GAANNNNTTC 3 cut(s) 125, 540, 657
XspI CTAG 5 cut(s) 323, 461, 519, 674, 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.