pycom01g16870
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
16331309 .. 16332847
1539 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16870.1

Sequence Viewer

Length: 1539 bp
ATGGGGTTCTCAGGTATCATTACAAGCATCTGGTCTATTACCATGCAACTGTTTCTCCTGATGGTCACTTCATCCTCCTTACATCTAAGAGGGAATGAGACAGATAGACAGTCCTTGCTTGCATTTAAAGCCGAAATCGTGAACGACCCACTGGGCATTCTTAGCTCCTGGAATGAATCCCTCCACTTCTGTCAGTGGCAAGGCATTGCTTGTGGCCGCAGACACCAGAGAGTCACTGTGCTGGACCTCCAATCAAGCCGGCTGAATGGTCAGCTATCTCCCCACATTGGAAACTTGAGCTTTCTCAGGACGTTAAACCTCCAAGACAATAGCTTCAACAACATCATCCCTCCAGAAATCGATCTTTTGTTCCGGCTGCAACAATTACACCTTAGCAGAAATTCCTTCAGGGGTGATATTCCGGTCAACATATCACGTTGCTCTAACCTCCGCTATCTTGACTTAGGCGATAACTTTCTTGGTGTCAAGATTCATATTGAAATCGGCTTCTTGTCCGACCTTCAGGTACTTAATTTAAGCAGTAACAATTTAAGTGGGGAAATCCCACCTTCTTTGGGAAATCTTTCTTCTCTTCAGATGCTATCTTTCCAACAAAATTTTCTGCGGGGAGGTATTCCAGATAGTCTTGGCCAGTTGAATAGCTTAAAAATTCTTTCTTTGGGTTTCAATAATTTGAATGGTACCATCCCTCCCTCCATATACAACCTCTCTTCTATTACAGTCATCTCGGTGCTTGAAAACCTACTTCATGGAACTCTTCCTCCTGGCTTGGGCCACACTGTATTTCCAAACCTCGAAGACTTTTATTTTCATTTCAACCGATTCAGTGGACAAATACCAGTTTCAATCTCCAATGCATTCAACCTTGCATTATTTGGTATCTCAGCCAATATGTTTACTGGAAGAGTGCCTAATCTGGCAAGGATGTCCAATCTGTTCCGGGTAGAAATGGATGCTAACAATCTTGGAAATAATGAGGAAGGTGACTTGGACTTCCTTTCTTCTCTGGTTAATTGCACCAACTTAGAGCGTTTGGATATCAGTGGCAATAAATTTGGAGGAGTGCTACCTGAATCTCTCAGCAACCTCTCAACAAAGCTCGAGGTAATGAGATTGGGAGGGAATCAGATACGCGGAAGCATTCCTGTAGGAATTGGAAATCTCATCAACTTGGGGATACTAGGATTTGAGGTAAACCAATTGAGGGGCCCTATACCAATCTCAATATGTAAACTGAATAAAATTTTTAGTCTGTCATTGAATCACAATGAGTTGTTCGGTACTATCCCAGTTATGCTAGGCAATCTAACTTCGTTAGGCATTTTACTTCTCATGTCAAACAACTTACAAGGAAGCATACCACTAAGTCTCGGTGAATGCAGGAATTTGCAAGCTTTGAATCTTTCTCAAAATAATCTTAGTGGTCCCATTCCGGATGAAGTCATCAGTTTATCATCCCTGTCAAGTTTTTGGATCTGTCCCACAACTATTTTACTCATTCCATTCCATTTAGAGTAG

Protein Analysis

513

Amino Acids

56.21

Weight (kDa)

6.0

Isoelectric Point (pI)

40.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 3.8e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 144 - 230 5e-10 Leucine-rich repeat region
LRR_14 PF23598 364 - 477 9.5e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 701
AccB1I GGYRCC 1 cut(s) 701
AccII CGCG 1 cut(s) 1155
AccIII TCCGGA 1 cut(s) 1453
AciI CCGC 4 cut(s) 217, 451, 625, 1155
AclWI GGATC 1 cut(s) 1502
AcoI YGGCCR 2 cut(s) 214, 649
AcsI RAATTY 6 cut(s) 400, 616, 669, 1073, 1263, 1405
AcuI CTGAAG 3 cut(s) 391, 506, 578
AfaI GTAC 3 cut(s) 528, 703, 1303
AfiI CCNNNNNNNGG 4 cut(s) 287, 575, 791, 1225
AjnI CCWGG 2 cut(s) 167, 784
AjuI GAANNNNNNNTTGG 2 cut(s) 603, 635
AloI GAACNNNNNNTCC 2 cut(s) 766, 798
AluBI AGCT 7 cut(s) 165, 274, 300, 333, 663, 1120, 1415
AluI AGCT 7 cut(s) 165, 274, 300, 333, 663, 1120, 1415
Alw26I GTCTC 2 cut(s) 92, 1394
AlwI GGATC 1 cut(s) 1502
Ama87I CYCGRG 1 cut(s) 1121
Aor13HI TCCGGA 1 cut(s) 1453
AoxI GGCC 4 cut(s) 214, 649, 793, 1228
ApaI GGGCCC 1 cut(s) 1232
ApeKI GCWGC 1 cut(s) 376
ApoI RAATTY 6 cut(s) 400, 616, 669, 1073, 1263, 1405
Asp700I GAANNNNTTC 1 cut(s) 583
Asp718I GGTACC 1 cut(s) 701
AspS9I GGNCC 5 cut(s) 244, 793, 1228, 1229, 1445
AsuC2I CCSGG 1 cut(s) 962
AsuHPI GGTGA 3 cut(s) 425, 1016, 1406
AvaI CYCGRG 1 cut(s) 1121
AvaII GGWCC 2 cut(s) 244, 1445
BaeGI GKGCMC 1 cut(s) 1232
BalI TGGCCA 1 cut(s) 651
BanI GGYRCC 1 cut(s) 701
BanII GRGCYC 1 cut(s) 1232
BbsI GAAGAC 1 cut(s) 825
BbvI GCAGC 1 cut(s) 363
BccI CCATC 2 cut(s) 55, 713
BciT130I CCWGG 2 cut(s) 169, 786
BciVI GTATCC 1 cut(s) 1191
BcnI CCSGG 1 cut(s) 962
BcoDI GTCTC 2 cut(s) 92, 1394
BfaI CTAG 2 cut(s) 1202, 1319
BfmI CTRYAG 1 cut(s) 1167
BfuI GTATCC 1 cut(s) 1191
BisI GCNGC 2 cut(s) 217, 377
BlsI GCNGC 2 cut(s) 218, 378
Bme1390I CCNGG 3 cut(s) 169, 786, 962
Bme18I GGWCC 2 cut(s) 244, 1445
BmeT110I CYCGRG 1 cut(s) 1121
BmgT120I GGNCC 5 cut(s) 244, 793, 1228, 1229, 1445
BmiI GGNNCC 4 cut(s) 703, 1229, 1230, 1447
BmrFI CCNGG 3 cut(s) 169, 786, 962
BmrI ACTGGG 2 cut(s) 161, 1304
BmsI GCATC 3 cut(s) 36, 588, 964
BmuI ACTGGG 2 cut(s) 161, 1304
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 1 cut(s) 336
Bpu10I CCTNAGC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 316
BpuMI CCSGG 1 cut(s) 962
Bsa29I ATCGAT 1 cut(s) 360
BsaWI WCCGGW 2 cut(s) 421, 1453
BsaXI ACNNNNNCTCC 6 cut(s) 39, 69, 694, 724, 766, 796
Bsc4I CCNNNNNNNGG 4 cut(s) 287, 575, 791, 1225
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 5 cut(s) 156, 652, 860, 925, 1310
Bse3DI GCAATG 1 cut(s) 204
BseAI TCCGGA 1 cut(s) 1453
BseBI CCWGG 2 cut(s) 169, 786
BseCI ATCGAT 1 cut(s) 360
BseGI GGATG 7 cut(s) 71, 345, 705, 951, 979, 1462, 1475
BseLI CCNNNNNNNGG 4 cut(s) 287, 575, 791, 1225
BseMI GCAATG 1 cut(s) 204
BseMII CTCAG 4 cut(s) 24, 319, 918, 1114
BseNI ACTGG 5 cut(s) 156, 652, 860, 925, 1310
BseRI GAGGAG 1 cut(s) 1095
BseSI GKGCMC 1 cut(s) 1232
BseXI GCAGC 1 cut(s) 363
Bsh1236I CGCG 1 cut(s) 1155
BshFI GGCC 4 cut(s) 216, 651, 795, 1230
BshNI GGYRCC 1 cut(s) 701
BshVI ATCGAT 1 cut(s) 360
BsiHKCI CYCGRG 1 cut(s) 1121
BsiSI CCGG 5 cut(s) 259, 373, 422, 961, 1454
BslFI GGGAC 2 cut(s) 1431, 1485
BslI CCNNNNNNNGG 4 cut(s) 287, 575, 791, 1225
BsmAI GTCTC 2 cut(s) 92, 1394
BsmFI GGGAC 2 cut(s) 1431, 1485
BsmI GAATGC 4 cut(s) 156, 878, 1161, 1403
BsnI GGCC 4 cut(s) 216, 651, 795, 1230
BsoBI CYCGRG 1 cut(s) 1121
Bsp120I GGGCCC 1 cut(s) 1228
Bsp1286I GDGCHC 1 cut(s) 1232
Bsp13I TCCGGA 1 cut(s) 1453
Bsp143I GATC 2 cut(s) 361, 1494
BspACI CCGC 4 cut(s) 217, 451, 625, 1155
BspANI GGCC 4 cut(s) 216, 651, 795, 1230
BspCNI CTCAG 4 cut(s) 23, 318, 917, 1113
BspDI ATCGAT 1 cut(s) 360
BspEI TCCGGA 1 cut(s) 1453
BspFNI CGCG 1 cut(s) 1155
BspLI GGNNCC 4 cut(s) 703, 1229, 1230, 1447
BspPI GGATC 1 cut(s) 1502
BspT107I GGYRCC 1 cut(s) 701
BsrDI GCAATG 1 cut(s) 204
BsrFI RCCGGY 1 cut(s) 258
BsrI ACTGG 5 cut(s) 156, 652, 860, 925, 1310
BssAI RCCGGY 1 cut(s) 258
BssMI GATC 2 cut(s) 361, 1494
Bst2UI CCWGG 2 cut(s) 169, 786
Bst4CI ACNGT 5 cut(s) 51, 111, 238, 742, 802
Bst6I CTCTTC 4 cut(s) 597, 736, 783, 919
BstC8I GCNNGC 3 cut(s) 120, 260, 1413
BstF5I GGATG 7 cut(s) 71, 345, 705, 951, 979, 1462, 1475
BstFNI CGCG 1 cut(s) 1155
BstKTI GATC 2 cut(s) 364, 1497
BstMAI GTCTC 2 cut(s) 92, 1394
BstMBI GATC 2 cut(s) 361, 1494
BstMWI GCNNNNNNNGC 2 cut(s) 128, 162
BstNI CCWGG 2 cut(s) 169, 786
BstSCI CCNGG 3 cut(s) 167, 784, 960
BstSFI CTRYAG 1 cut(s) 1167
BstSLI GKGCMC 1 cut(s) 1232
BstUI CGCG 1 cut(s) 1155
BstV1I GCAGC 1 cut(s) 363
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 1 cut(s) 1494
BstYI RGATCY 1 cut(s) 1494
Bsu15I ATCGAT 1 cut(s) 360
BsuI GTATCC 1 cut(s) 1191
BsuRI GGCC 4 cut(s) 216, 651, 795, 1230
BsuTUI ATCGAT 1 cut(s) 360
BtsCI GGATG 7 cut(s) 71, 345, 705, 951, 979, 1462, 1475
BtsIMutI CAGTG 6 cut(s) 149, 200, 234, 798, 853, 1069
Cac8I GCNNGC 3 cut(s) 120, 260, 1413
Cfr10I RCCGGY 1 cut(s) 258
Cfr13I GGNCC 5 cut(s) 244, 793, 1228, 1229, 1445
ClaI ATCGAT 1 cut(s) 360
Csp6I GTAC 3 cut(s) 527, 702, 1302
CspCI CAANNNNNGTGG 4 cut(s) 535, 555, 570, 590
CviAII CATG 3 cut(s) 43, 770, 1354
CviQI GTAC 3 cut(s) 527, 702, 1302
DpnI GATC 2 cut(s) 363, 1496
DpnII GATC 2 cut(s) 361, 1494
DraI TTTAAA 1 cut(s) 127
EaeI YGGCCR 2 cut(s) 214, 649
Eam1104I CTCTTC 4 cut(s) 597, 736, 783, 919
EarI CTCTTC 4 cut(s) 597, 736, 783, 919
Eco24I GRGCYC 1 cut(s) 1232
Eco32I GATATC 1 cut(s) 1060
Eco47I GGWCC 2 cut(s) 244, 1445
Eco57I CTGAAG 3 cut(s) 391, 506, 578
Eco88I CYCGRG 1 cut(s) 1121
EcoO109I RGGNCCY 2 cut(s) 1228, 1229
EcoRII CCWGG 2 cut(s) 167, 784
EcoRV GATATC 1 cut(s) 1060
EcoT22I ATGCAT 1 cut(s) 880
EcoT38I GRGCYC 1 cut(s) 1232
FaeI CATG 3 cut(s) 46, 773, 1357
FaqI GGGAC 2 cut(s) 1431, 1485
FatI CATG 3 cut(s) 42, 769, 1353
FauI CCCGC 1 cut(s) 618
Fnu4HI GCNGC 2 cut(s) 217, 377
FokI GGATG 7 cut(s) 58, 332, 692, 958, 986, 1462, 1469
FriOI GRGCYC 1 cut(s) 1232
Fsp4HI GCNGC 2 cut(s) 217, 377
FspBI CTAG 2 cut(s) 1202, 1319
GluI GCNGC 2 cut(s) 217, 377
GsuI CTGGAG 1 cut(s) 336
HaeIII GGCC 4 cut(s) 216, 651, 795, 1230
HapII CCGG 5 cut(s) 259, 373, 422, 961, 1454
Hin1II CATG 3 cut(s) 46, 773, 1357
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HindIII AAGCTT 1 cut(s) 1413
HinfI GANTC 8 cut(s) 176, 231, 490, 843, 1094, 1144, 1282, 1420
HpaII CCGG 5 cut(s) 259, 373, 422, 961, 1454
HphI GGTGA 3 cut(s) 425, 1016, 1406
Hpy166II GTNNAC 6 cut(s) 142, 427, 851, 918, 1216, 1253
Hpy188I TCNGA 3 cut(s) 517, 597, 1149
Hpy188III TCNNGA 8 cut(s) 58, 139, 307, 353, 458, 487, 638, 1454
Hpy8I GTNNAC 6 cut(s) 142, 427, 851, 918, 1216, 1253
HpyAV CCTTC 4 cut(s) 415, 530, 579, 995
HpyCH4III ACNGT 5 cut(s) 51, 111, 238, 742, 802
HpyCH4IV ACGT 2 cut(s) 311, 436
HpyCH4V TGCA 8 cut(s) 46, 122, 379, 878, 890, 1038, 1401, 1411
HpyF10VI GCNNNNNNNGC 2 cut(s) 128, 162
HpySE526I ACGT 2 cut(s) 311, 436
Hsp92II CATG 3 cut(s) 46, 773, 1357
Kpn2I TCCGGA 1 cut(s) 1453
KpnI GGTACC 1 cut(s) 705
KroI GCCGGC 1 cut(s) 258
KroNI GCCGGC 1 cut(s) 260
Kzo9I GATC 2 cut(s) 361, 1494
LmnI GCTCC 1 cut(s) 170
Lsp1109I GCAGC 1 cut(s) 363
LweI GCATC 3 cut(s) 36, 588, 964
MaeI CTAG 2 cut(s) 1202, 1319
MaeII ACGT 2 cut(s) 311, 436
MaeIII GTNAC 4 cut(s) 64, 232, 542, 1004
MalI GATC 2 cut(s) 363, 1496
MboI GATC 2 cut(s) 361, 1494
MboII GAAGA 7 cut(s) 579, 584, 723, 770, 830, 936, 1014
MfeI CAATTG 1 cut(s) 1220
MflI RGATCY 1 cut(s) 1494
MhlI GDGCHC 1 cut(s) 1232
MlsI TGGCCA 1 cut(s) 651
MluNI TGGCCA 1 cut(s) 651
MlyI GAGTC 1 cut(s) 240
MmeI TCCRAC 2 cut(s) 540, 634
Mox20I TGGCCA 1 cut(s) 651
Mph1103I ATGCAT 1 cut(s) 880
MroI TCCGGA 1 cut(s) 1453
MroNI GCCGGC 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 583
MscI TGGCCA 1 cut(s) 651
MseI TTAA 7 cut(s) 126, 314, 531, 536, 551, 665, 1032
MslI CAYNNNNRTG 1 cut(s) 749
Msp20I TGGCCA 1 cut(s) 651
MspI CCGG 5 cut(s) 259, 373, 422, 961, 1454
MspR9I CCNGG 3 cut(s) 169, 786, 962
MunI CAATTG 1 cut(s) 1220
Mva1269I GAATGC 4 cut(s) 156, 878, 1161, 1403
MvaI CCWGG 2 cut(s) 169, 786
MvnI CGCG 1 cut(s) 1155
MwoI GCNNNNNNNGC 2 cut(s) 128, 162
NaeI GCCGGC 1 cut(s) 260
NciI CCSGG 1 cut(s) 962
NdeII GATC 2 cut(s) 361, 1494
NgoMIV GCCGGC 1 cut(s) 258
NlaIII CATG 3 cut(s) 46, 773, 1357
NlaIV GGNNCC 4 cut(s) 703, 1229, 1230, 1447
NmuCI GTSAC 3 cut(s) 64, 232, 1004
NsiI ATGCAT 1 cut(s) 880
PaeR7I CTCGAG 1 cut(s) 1121
PctI GAATGC 4 cut(s) 156, 878, 1161, 1403
PdiI GCCGGC 1 cut(s) 260
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 7 cut(s) 176, 490, 843, 1094, 1144, 1282, 1420
PfoI TCCNGGA 1 cut(s) 167
PkrI GCNGC 2 cut(s) 218, 378
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
Psp6I CCWGG 2 cut(s) 167, 784
PspGI CCWGG 2 cut(s) 167, 784
PspN4I GGNNCC 4 cut(s) 703, 1229, 1230, 1447
PspOMI GGGCCC 1 cut(s) 1228
PspPI GGNCC 5 cut(s) 244, 793, 1228, 1229, 1445
PspXI VCTCGAGB 1 cut(s) 1121
PsuI RGATCY 1 cut(s) 1494
RsaI GTAC 3 cut(s) 528, 703, 1303
RsaNI GTAC 3 cut(s) 527, 702, 1302
RseI CAYNNNNRTG 1 cut(s) 749
SaqAI TTAA 7 cut(s) 126, 314, 531, 536, 551, 665, 1032
SatI GCNGC 2 cut(s) 217, 377
Sau3AI GATC 2 cut(s) 361, 1494
Sau96I GGNCC 5 cut(s) 244, 793, 1228, 1229, 1445
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 3 cut(s) 169, 786, 962
SduI GDGCHC 1 cut(s) 1232
SfaNI GCATC 3 cut(s) 36, 588, 964
SfcI CTRYAG 1 cut(s) 1167
Sfr274I CTCGAG 1 cut(s) 1121
SinI GGWCC 2 cut(s) 244, 1445
SlaI CTCGAG 1 cut(s) 1121
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 2 cut(s) 295, 1121
SmoI CTYRAG 2 cut(s) 295, 1121
SsiI CCGC 4 cut(s) 217, 451, 625, 1155
SspMI CTAG 2 cut(s) 1202, 1319
StyD4I CCNGG 3 cut(s) 167, 784, 960
TaaI ACNGT 5 cut(s) 51, 111, 238, 742, 802
TaiI ACGT 2 cut(s) 314, 439
TaqI TCGA 3 cut(s) 360, 816, 1122
TauI GCSGC 1 cut(s) 219
TfiI GAWTC 7 cut(s) 176, 490, 843, 1094, 1144, 1282, 1420
Tru1I TTAA 7 cut(s) 126, 314, 531, 536, 551, 665, 1032
Tru9I TTAA 7 cut(s) 126, 314, 531, 536, 551, 665, 1032
TscAI CASTG 6 cut(s) 156, 200, 241, 805, 853, 1069
TseFI GTSAC 3 cut(s) 64, 232, 1004
TseI GCWGC 1 cut(s) 376
Tsp45I GTSAC 3 cut(s) 64, 232, 1004
TspDTI ATGAA 6 cut(s) 60, 189, 482, 758, 821, 1473
TspRI CASTG 6 cut(s) 156, 200, 241, 805, 853, 1069
VpaK11BI GGWCC 2 cut(s) 244, 1445
XapI RAATTY 6 cut(s) 400, 616, 669, 1073, 1263, 1405
XhoI CTCGAG 1 cut(s) 1121
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 2 cut(s) 1202, 1319
Zsp2I ATGCAT 1 cut(s) 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.