RLG00000034194
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
38147896 .. 38150418
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034194

Sequence Viewer

Length: 2184 bp
ATGTTAACCATTTTGGCATTGGACCAAAATAAGTTGTCTGGTACCATCCCTCCTTCCATTTACAACTTATCTGCTATTTATGCTTTTTCTGTAGTGCTAAACCAAATTCAGGGGAGTATTCCCTCACACTTGACCACTGCATTTCCTAACCTCGAGGTCTTTCACATTTCGGGGAATGAATTTACCGGGGCCATTCCTTGGTCGATATCCAATGCAACAAGTCTGGTGTCGTTCAATGTCGCAAGTAACAAGCTAACAGGACAAGTGCCCAATTTCCGAAAGCTTCAAAACCTCACAAATTTCAATGTCGCGGCTAATCATCTCGGAAGCGGTAAACAAGGCGACTTGAGCTTTGTCTCAGAGTTGATGAACGCCACACAGTTAAGACAGTTGATTTTTAGCTATAACAATTTCGGAGGGACATTGCCCACATCAATATCCAATCTCTCAACCAGTCTTGAAATGCTTTGGATTCCTGACAACCAACTACATGGAAGCATTCCAACTGGTTTAGGAAATCTTGTGAATTTGCAATCACTGGCTTTGGCAGCAAACTCCTTCACAGGTAGCATCCCCGCTGACATTGGGAAGCTTTCAACGCTTGTGGAATTAGCTCTTCAGGACAACCAATTATCAGGAAGCATTCCATTTTCTCTAGGAAATTTAACCATGTTAATCAGTCTTTACTTGCAAGCAAATAATCTTAGTGGCAGCATCCCTTCGAGTCTAGGGAAATGCCACGGGTTGTTGGAATTGGATCTTTCACAAAATAACCTTAATGGTACAATACCCCAGCAACTACTTATTGGCGTCCTCTCCTTGTCAATTTCTCTCAACTTGTCCAGAAACCACTTTGTTGGTTCTCTCCCTGTGCAGATCGGCAAGTTGAGGAATCTAGGTGCACTTGACTTTTCTGAGAACATGTTCTCGGGAGAGCTTCCTAATAGCCTCGGTGCTTTTAAGAATGCAAGTGCAATATCAGTTGTAGGAAACACCGCACTCTGCGGAGGTATTGCAGAGCTTCGACTTCCTGTGTGCAAATCTGAAGTGTCTAAAGCAAGAGGTTTGTCTCGTACAATTAAAATAGTTATGGCTTTAGTATTCGGGTTTACTCTGTTGGTAATTGCTATGGTGCTATCCTTCTTACTTCATCAAAAGAAAAAGAAAGCAATTAAGTTGAGCACTTTGGGGAACTCTTTTTTGCAAGTCTCGTATGTTATGCTCCTAAAAGCAACTGACGGGTTTTCTTCCACTAACTTGATCGGTGAGGGTGGTTTTGGTTCTGTGTACAAAGGAATTCTCGATCTTGATAGAGTTGTTGCTGTAAAGGTACTTAACATGTTACACAGGGGAGCTTCAAAGAGTTTCATAGCTGAATGTGAAGCACTGAGAAACATCAGGCATCGAAATCTAGTAAAGATTATAACTGCATGTTCAAGTGTTGATTTTCGTGGAAATGATTTCAAGGCTCTAGTTTATGAATTCATGGAAAATGGGAGCCTAGAAGAGTGGTTGCATCTAAATACTGGAATTGAAACGCCAATAGATGCACCCAAAATTTTAAGTCTTGTCCAGAGGCTTGATATCGCCATTGATGTTGCTTCTGCATTGGATTATCTTCACAATCATTGTGAAACACCAATAGTTCATTGTGATCTCAAACCAAGTAACGTTCTTTTGGACAAAGAGCTGACATCACATGTTTCCGACTTTGGGCTGGCAAAGTTTCTCTCAACATTAACTGATAATGTTTCTGGAAATCAATCAAGCTCCATTGGAATAAGAGGATCGGTTGGTTATGCTGCTCCTGAGTATGGTATGGGAAGTGAGGTGTCAACATGTGGGGATGTGTACGGCTTTGGCATTCTCTTGTTAGAAATGTTTACTGGGAAGAGACCTACTGATCCCATGTTCAGTGACGGCTTGAATCTTCATAACTTTGTGAAGATGGCTCTACCTGAACATGTTGAGGAGATTACAGATTCACTACTTGAAGAAGGCATCACTAGTATCGATGAAGCTCACAATCAAACCATCACAAGTCCACTACAGAAGATTGAAGAGTGCTTGACGTTGATATTTGGAATTGGAATTGCTTGTTCTGCTGAATCCCCAACAAACCGAAAGGATATAAGTGATGTTGTATCTGAATTGAACACCATCAAGAACAATCTTATTGGCTAG

Protein Analysis

728

Amino Acids

78.14

Weight (kDa)

5.8

Isoelectric Point (pI)

27.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 169 - 256 1.4e-06 Leucine-rich repeat region
Pkinase PF00069 417 - 645 1.4e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 419 - 659 9.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1424
AbsI CCTCGAGG 1 cut(s) 152
Acc65I GGTACC 1 cut(s) 41
AccB1I GGYRCC 1 cut(s) 41
AccB7I CCANNNNNTGG 1 cut(s) 198
AccII CGCG 1 cut(s) 311
AciI CCGC 5 cut(s) 311, 330, 576, 996, 1005
AclI AACGTT 1 cut(s) 1671
AclWI GGATC 3 cut(s) 765, 1795, 1898
AcsI RAATTY 8 cut(s) 105, 179, 298, 526, 661, 1296, 1481, 1557
AcuI CTGAAG 2 cut(s) 602, 1065
AcyI GRCGYC 1 cut(s) 810
AfaI GTAC 6 cut(s) 43, 784, 1075, 1289, 1332, 1853
AfiI CCNNNNNNNGG 4 cut(s) 109, 198, 1713, 1814
AflIII ACRYGT 5 cut(s) 921, 1338, 1699, 1838, 1963
AhlI ACTAGT 1 cut(s) 2006
Alw21I GWGCWC 2 cut(s) 904, 1184
Alw26I GTCTC 4 cut(s) 361, 1074, 1213, 1888
Alw44I GTGCAC 1 cut(s) 900
AlwI GGATC 3 cut(s) 765, 1795, 1898
Ama87I CYCGRG 2 cut(s) 152, 928
AoxI GGCC 1 cut(s) 189
ApaLI GTGCAC 1 cut(s) 900
ApeKI GCWGC 3 cut(s) 548, 711, 1802
ApoI RAATTY 8 cut(s) 105, 179, 298, 526, 661, 1296, 1481, 1557
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
Asp700I GAANNNNTTC 1 cut(s) 923
Asp718I GGTACC 1 cut(s) 41
AspS9I GGNCC 2 cut(s) 22, 189
AsuC2I CCSGG 1 cut(s) 187
AsuHPI GGTGA 1 cut(s) 1277
AvaI CYCGRG 2 cut(s) 152, 928
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 2 cut(s) 270, 904
BanI GGYRCC 1 cut(s) 41
Bbv12I GWGCWC 2 cut(s) 904, 1184
BbvI GCAGC 3 cut(s) 560, 723, 1789
BccI CCATC 4 cut(s) 53, 1942, 2042, 2168
BceAI ACGGC 2 cut(s) 1870, 1936
BcnI CCSGG 1 cut(s) 187
BcoDI GTCTC 4 cut(s) 361, 1074, 1213, 1888
BcuI ACTAGT 1 cut(s) 2006
BfaI CTAG 8 cut(s) 656, 728, 896, 1412, 1472, 1502, 2007, 2182
BfmI CTRYAG 2 cut(s) 90, 2048
BisI GCNGC 4 cut(s) 312, 549, 712, 1803
BlsI GCNGC 4 cut(s) 313, 550, 713, 1804
Bme1390I CCNGG 1 cut(s) 187
Bme18I GGWCC 1 cut(s) 22
BmeT110I CYCGRG 2 cut(s) 152, 928
BmgT120I GGNCC 2 cut(s) 22, 189
BmiI GGNNCC 3 cut(s) 43, 190, 1499
BmrFI CCNGG 1 cut(s) 187
BmrI ACTGGG 1 cut(s) 1896
BmsI GCATC 6 cut(s) 579, 723, 1411, 1525, 1537, 2010
BmuI ACTGGG 1 cut(s) 1896
BpuEI CTTGAG 1 cut(s) 367
BpuMI CCSGG 1 cut(s) 187
Bsa29I ATCGAT 1 cut(s) 2013
BsaHI GRCGYC 1 cut(s) 810
BsaI GGTCTC 1 cut(s) 1888
BsaJI CCNNGG 4 cut(s) 186, 197, 739, 949
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 198, 1713, 1814
Bse1I ACTGG 5 cut(s) 453, 511, 543, 1531, 1891
Bse3DI GCAATG 1 cut(s) 422
BseCI ATCGAT 1 cut(s) 2013
BseDI CCNNGG 4 cut(s) 186, 197, 739, 949
BseGI GGATG 4 cut(s) 45, 570, 714, 1852
BseLI CCNNNNNNNGG 4 cut(s) 109, 198, 1713, 1814
BseMI GCAATG 1 cut(s) 422
BseMII CTCAG 4 cut(s) 372, 906, 1379, 1800
BseNI ACTGG 5 cut(s) 453, 511, 543, 1531, 1891
BseRI GAGGAG 1 cut(s) 1985
BseSI GKGCMC 2 cut(s) 270, 904
BseXI GCAGC 3 cut(s) 560, 723, 1789
BseYI CCCAGC 1 cut(s) 792
BsgI GTGCAG 1 cut(s) 893
Bsh1236I CGCG 1 cut(s) 311
BshFI GGCC 1 cut(s) 191
BshNI GGYRCC 1 cut(s) 41
BshVI ATCGAT 1 cut(s) 2013
BsiHKAI GWGCWC 2 cut(s) 904, 1184
BsiHKCI CYCGRG 2 cut(s) 152, 928
BsiSI CCGG 1 cut(s) 186
BslFI GGGAC 1 cut(s) 433
BslI CCNNNNNNNGG 4 cut(s) 109, 198, 1713, 1814
BsmAI GTCTC 4 cut(s) 361, 1074, 1213, 1888
BsmFI GGGAC 1 cut(s) 433
BsmI GAATGC 4 cut(s) 498, 642, 970, 1863
BsnI GGCC 1 cut(s) 191
Bso31I GGTCTC 1 cut(s) 1888
BsoBI CYCGRG 2 cut(s) 152, 928
Bsp1286I GDGCHC 3 cut(s) 270, 904, 1184
Bsp1407I TGTACA 1 cut(s) 1287
Bsp143I GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
BspACI CCGC 5 cut(s) 311, 330, 576, 996, 1005
BspANI GGCC 1 cut(s) 191
BspCNI CTCAG 4 cut(s) 371, 907, 1380, 1801
BspDI ATCGAT 1 cut(s) 2013
BspFNI CGCG 1 cut(s) 311
BspLI GGNNCC 3 cut(s) 43, 190, 1499
BspPI GGATC 3 cut(s) 765, 1795, 1898
BspQI GCTCTTC 1 cut(s) 621
BspT107I GGYRCC 1 cut(s) 41
BspTNI GGTCTC 1 cut(s) 1888
BsrDI GCAATG 1 cut(s) 422
BsrGI TGTACA 1 cut(s) 1287
BsrI ACTGG 5 cut(s) 453, 511, 543, 1531, 1891
BssECI CCNNGG 4 cut(s) 186, 197, 739, 949
BssMI GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
BssNI GRCGYC 1 cut(s) 810
BssT1I CCWWGG 1 cut(s) 197
Bst4CI ACNGT 2 cut(s) 381, 390
Bst6I CTCTTC 4 cut(s) 621, 1500, 1886, 2055
BstACI GRCGYC 1 cut(s) 810
BstAUI TGTACA 1 cut(s) 1287
BstC8I GCNNGC 2 cut(s) 693, 1719
BstDEI CTNAG 5 cut(s) 358, 704, 915, 1388, 1809
BstDSI CCRYGG 1 cut(s) 739
BstF5I GGATG 4 cut(s) 45, 570, 714, 1852
BstFNI CGCG 1 cut(s) 311
BstKTI GATC 7 cut(s) 760, 879, 1263, 1306, 1657, 1790, 1906
BstMAI GTCTC 4 cut(s) 361, 1074, 1213, 1888
BstMBI GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
BstMWI GCNNNNNNNGC 5 cut(s) 80, 348, 548, 598, 2102
BstNSI RCATGY 6 cut(s) 925, 1342, 1434, 1703, 1842, 1967
BstSCI CCNGG 1 cut(s) 185
BstSFI CTRYAG 2 cut(s) 90, 2048
BstSLI GKGCMC 2 cut(s) 270, 904
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 3 cut(s) 560, 723, 1789
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 2 cut(s) 491, 857
BstYI RGATCY 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 2013
BsuRI GGCC 1 cut(s) 191
BsuTUI ATCGAT 1 cut(s) 2013
BtgI CCRYGG 1 cut(s) 739
BtsCI GGATG 4 cut(s) 45, 570, 714, 1852
BtsI GCAGTG 1 cut(s) 135
BtsIMutI CAGTG 4 cut(s) 135, 536, 1385, 1921
Cac8I GCNNGC 2 cut(s) 693, 1719
Cfr13I GGNCC 2 cut(s) 22, 189
ClaI ATCGAT 1 cut(s) 2013
CseI GACGC 1 cut(s) 799
Csp6I GTAC 6 cut(s) 42, 783, 1074, 1288, 1331, 1852
CspCI CAANNNNNGTGG 2 cut(s) 585, 620
CviQI GTAC 6 cut(s) 42, 783, 1074, 1288, 1331, 1852
DdeI CTNAG 5 cut(s) 358, 704, 915, 1388, 1809
DpnI GATC 7 cut(s) 759, 878, 1262, 1305, 1656, 1789, 1905
DpnII GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
Eam1104I CTCTTC 4 cut(s) 621, 1500, 1886, 2055
EarI CTCTTC 4 cut(s) 621, 1500, 1886, 2055
Eco130I CCWWGG 1 cut(s) 197
Eco31I GGTCTC 1 cut(s) 1888
Eco32I GATATC 2 cut(s) 207, 1585
Eco47I GGWCC 1 cut(s) 22
Eco57I CTGAAG 2 cut(s) 602, 1065
Eco88I CYCGRG 2 cut(s) 152, 928
EcoRI GAATTC 2 cut(s) 1296, 1481
EcoRV GATATC 2 cut(s) 207, 1585
EcoT14I CCWWGG 1 cut(s) 197
ErhI CCWWGG 1 cut(s) 197
FaqI GGGAC 1 cut(s) 433
FauI CCCGC 1 cut(s) 583
Fnu4HI GCNGC 4 cut(s) 312, 549, 712, 1803
FokI GGATG 4 cut(s) 32, 557, 701, 1859
Fsp4HI GCNGC 4 cut(s) 312, 549, 712, 1803
FspBI CTAG 8 cut(s) 656, 728, 896, 1412, 1472, 1502, 2007, 2182
GluI GCNGC 4 cut(s) 312, 549, 712, 1803
GsaI CCCAGC 1 cut(s) 796
HaeIII GGCC 1 cut(s) 191
HapII CCGG 1 cut(s) 186
HgaI GACGC 1 cut(s) 799
Hin1I GRCGYC 1 cut(s) 810
HincII GTYRAC 2 cut(s) 6, 1836
HindII GTYRAC 2 cut(s) 6, 1836
HindIII AAGCTT 2 cut(s) 281, 590
HinfI GANTC 6 cut(s) 472, 724, 892, 1927, 1982, 2108
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 1 cut(s) 186
HphI GGTGA 1 cut(s) 1277
Hpy166II GTNNAC 9 cut(s) 6, 335, 902, 1110, 1288, 1836, 1852, 1884, 2045
Hpy188I TCNGA 8 cut(s) 278, 326, 361, 416, 916, 1045, 1708, 2149
Hpy8I GTNNAC 9 cut(s) 6, 335, 902, 1110, 1288, 1836, 1852, 1884, 2045
HpyAV CCTTC 5 cut(s) 63, 568, 729, 1150, 1991
HpyCH4III ACNGT 2 cut(s) 381, 390
HpyCH4IV ACGT 2 cut(s) 1671, 2072
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 348, 548, 598, 2102
HpyF3I CTNAG 5 cut(s) 358, 704, 915, 1388, 1809
HpySE526I ACGT 2 cut(s) 1671, 2072
Hsp92I GRCGYC 1 cut(s) 810
KpnI GGTACC 1 cut(s) 45
KspAI GTTAAC 1 cut(s) 6
Kzo9I GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 5 cut(s) 1227, 1352, 1497, 1775, 1810
Lsp1109I GCAGC 3 cut(s) 560, 723, 1789
LweI GCATC 6 cut(s) 579, 723, 1411, 1525, 1537, 2010
MaeI CTAG 8 cut(s) 656, 728, 896, 1412, 1472, 1502, 2007, 2182
MaeII ACGT 2 cut(s) 1671, 2072
MaeIII GTNAC 4 cut(s) 245, 1341, 1667, 1916
MalI GATC 7 cut(s) 759, 878, 1262, 1305, 1656, 1789, 1905
MboI GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 3 cut(s) 270, 904, 1184
MlyI GAGTC 1 cut(s) 733
MmeI TCCRAC 3 cut(s) 527, 729, 1731
MroXI GAANNNNTTC 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 1 cut(s) 186
MspR9I CCNGG 1 cut(s) 187
Mva1269I GAATGC 4 cut(s) 498, 642, 970, 1863
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 5 cut(s) 80, 348, 548, 598, 2102
NciI CCSGG 1 cut(s) 187
NdeII GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
NlaIV GGNNCC 3 cut(s) 43, 190, 1499
NmuCI GTSAC 1 cut(s) 1916
NspI RCATGY 6 cut(s) 925, 1342, 1434, 1703, 1842, 1967
PaeR7I CTCGAG 1 cut(s) 152
PciI ACATGT 5 cut(s) 921, 1338, 1699, 1838, 1963
PciSI GCTCTTC 1 cut(s) 621
PctI GAATGC 4 cut(s) 498, 642, 970, 1863
PdmI GAANNNNTTC 1 cut(s) 923
PfeI GAWTC 5 cut(s) 472, 892, 1927, 1982, 2108
PflMI CCANNNNNTGG 1 cut(s) 198
PkrI GCNGC 4 cut(s) 313, 550, 713, 1804
PleI GAGTC 1 cut(s) 732
PpsI GAGTC 1 cut(s) 732
PscI ACATGT 5 cut(s) 921, 1338, 1699, 1838, 1963
PsiI TTATAA 1 cut(s) 1424
Psp1406I AACGTT 1 cut(s) 1671
PspFI CCCAGC 1 cut(s) 792
PspN4I GGNNCC 3 cut(s) 43, 190, 1499
PspPI GGNCC 2 cut(s) 22, 189
PspXI VCTCGAGB 1 cut(s) 152
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 6 cut(s) 43, 784, 1075, 1289, 1332, 1853
RsaNI GTAC 6 cut(s) 42, 783, 1074, 1288, 1331, 1852
SapI GCTCTTC 1 cut(s) 621
SatI GCNGC 4 cut(s) 312, 549, 712, 1803
Sau3AI GATC 7 cut(s) 757, 876, 1260, 1303, 1654, 1787, 1903
Sau96I GGNCC 2 cut(s) 22, 189
SchI GAGTC 1 cut(s) 733
ScrFI CCNGG 1 cut(s) 187
SduI GDGCHC 3 cut(s) 270, 904, 1184
SfaNI GCATC 6 cut(s) 579, 723, 1411, 1525, 1537, 2010
SfcI CTRYAG 2 cut(s) 90, 2048
Sfr274I CTCGAG 1 cut(s) 152
SinI GGWCC 1 cut(s) 22
SlaI CTCGAG 1 cut(s) 152
SmlI CTYRAG 2 cut(s) 152, 346
SmoI CTYRAG 2 cut(s) 152, 346
SpeI ACTAGT 1 cut(s) 2006
SsiI CCGC 5 cut(s) 311, 330, 576, 996, 1005
SspMI CTAG 8 cut(s) 656, 728, 896, 1412, 1472, 1502, 2007, 2182
StyD4I CCNGG 1 cut(s) 185
StyI CCWWGG 1 cut(s) 197
TaaI ACNGT 2 cut(s) 381, 390
TaiI ACGT 2 cut(s) 1674, 2075
TaqI TCGA 7 cut(s) 153, 203, 722, 1024, 1302, 1405, 2013
TatI WGTACW 1 cut(s) 1287
TauI GCSGC 1 cut(s) 314
TfiI GAWTC 5 cut(s) 472, 892, 1927, 1982, 2108
TscAI CASTG 4 cut(s) 142, 543, 1392, 1921
TseFI GTSAC 1 cut(s) 1916
TseI GCWGC 3 cut(s) 548, 711, 1802
Tsp45I GTSAC 1 cut(s) 1916
TspDTI ATGAA 9 cut(s) 192, 383, 1139, 1357, 1474, 1494, 1637, 1922, 2031
TspRI CASTG 4 cut(s) 142, 543, 1392, 1921
Van91I CCANNNNNTGG 1 cut(s) 198
VneI GTGCAC 1 cut(s) 900
VpaK11BI GGWCC 1 cut(s) 22
XapI RAATTY 8 cut(s) 105, 179, 298, 526, 661, 1296, 1481, 1557
XceI RCATGY 6 cut(s) 925, 1342, 1434, 1703, 1842, 1967
XcmI CCANNNNNNNNNTGG 1 cut(s) 16
XhoI CTCGAG 1 cut(s) 152
XmnI GAANNNNTTC 1 cut(s) 923
XspI CTAG 8 cut(s) 656, 728, 896, 1412, 1472, 1502, 2007, 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.