Rmu_sc0004484.1_g000008
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004484.1
Physical Location & Seq
Forward (+)
38744 .. 41894
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004484.1_g000008.1.cds

Sequence Viewer

Length: 3021 bp
atgtccattttcggttgtagctccatgcaattgaaccatccgagactcgaagggaatgagacggataggctggcattgctagcaatcaaagctcaaatacaacacgatcccaaccaggtcacaagctcatggaatgaaacccttcacttttgcctgtggcacggcgtcacctgcagtcgacgacatcgccaaagggtgacgaagctgggcttgggctctctagctttggggggatccatatctccacacatcggaaatctaagcttcttaagagtgctaaatctcaacaacaataccttcactcatcaaatccctcctcaaattgggcatttgcatagtttgcaggtattgtatctaaacaataactcacttactggcaccattcctgccaatatatccaactgcttcaaactcatcactctccttcaaagaaacaatctagtgggtaaaattcctcccatactgagttccttgtcaaagcttcagacttttgttttggaagacaacaatttaacaggagagatccctccttctttggggaacctttcttctctcgagaaattttctatagttggtaataacttagaaggaagcattcctagttctctatgccagttcaaaagattaaaaggtatctatttaggctcaaataggttatctggtatcatcccttcctgcatttacaacctctctggcatagttgctttcagtgtacaaggaaaccaaattcaaggaagtcttccatcaaacttgagcaatgcttttcccaaccttcaaatgttttccgttgccgacaatcaatttactggggccatcccttcctcaatatccaaggcaacaaatcttgtggtgtttcaatgttattccaacaaactcactggacaggtgccaaatttacggaatcttcataaccttagagcattcaatgtctatggtaataatcttggaagcggtaaagatggtgacttgagttttgtctcagaattgatcaatgccacacagctaacttatttgcagatccagaacaacaattttggagggacgttgcccacatcaatatccaatctctcaatcaatctccaaatcctaggaattggagaaaacaaagtacatggaagcatcccaactggattagggaatcttgccaacctgcaaggactcggtatggaagaaaactctctcacaggtagcatccccacaaacattgggcagctttcaaggcttgggcggttgtttcttaacaacaatgaattatcggggagcattccatcttctcttggcaatttaacattgttaacatttctcaacttgcaagaaaataatctagagggtagcatcccgtccagtttagggaaatgccagtggttaaacgaattgggtctttctggaaacaatctgaatggcacgataccgccccaagttattggcctctcatctttatcaacagctttgggattgggtagaaaccaattcactagttcccttccgatggagattggcaaactaaagaatttaggtggactggacatttctgacaatttgttatcaggagaacttcccagtagcctcggcagttgcgagagtttagaagaactatacttgcaaggcaacttcttcttgggacccattccttcatctatgaaggacttgagagggattcgatatttagacctttctcaaaacaatttgtcaggagatattccacagtttcttgagaatctggacttggagtatctaaacctatccttcaaccagttttggggagcggtaccaactggcggtgcttttaagaatgcaagtgccacttcagttgctggaaatgctagactctgcggaggtatggctagtcttcgacttcctctgtgcaagcttactgagtctaaaggagaagggttgtctggtagaatgaaactagtgatctctttagtctccgggttcactcttttgggactggttgtggtgttgtctctttttcttcttggtaagaaaaggaaacaaactaagttaagcactttggggaactctgttttgcaagtttcatacgctacactcctcagagctaccgatggtttttcttcaactaatttgatcggtgtgggtgcttttgggtctgtgtacaaaggaatccttgctgatgatagagttgttgttgctgtgaaggtgcttaacatgttacaccggggagcagctaagagtttcatggccgaatgtgaggcattgagaaatatcagacatcgaaatttggtcaagatcttaactgcatgttcaagtattgattttggaggcaatgatttcaaggctcttgtttacgagttcatggacaacgggagcttggaagattggttgcatccatctagtggaactagagaggtaacagaagcacccaaaagtttaagtcttattgaaaggctcaacattgccattgatgttgccagtgcattggattatcttcacaaccattgtgaaacaccgatcgttcattgtgatctcaagccaagtaatgttctcttggatggtgacctgactggacatgtttctgactttgggttgtcaagatttctctcagaaccaaccatgagtgtttctggaaatcaatcaagctccattggaattagaggatcggttggttatgctgcaccagagtatggtatgggaagtgaggtatccacgtaccgggatgtctacagctttggtattctcttgttagaaatgtttacggggaagcgacccactgatcacatgtttagtgacagcttgaatcttcataattatgtgaagacagctctccctgaactggtttcagagatttcagaatcacttattcttcaagaaggcaccaccaatgtcactgacgctcacaggcacagccgattgagtgtgagagcacagaaaattgaagagtgcttgactctgatacttggtataggaattgcatgttctgttgaatcccccaaaaacaggaaggatatcagtgatgttgcatctgaattgcaatccattaggcgcaatcttctcaactag

Protein Analysis

1006

Amino Acids

108.51

Weight (kDa)

7.29

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 179
Acc36I ACCTGC 3 cut(s) 179, 334, 1158
Acc65I GGTACC 1 cut(s) 1768
AccB1I GGYRCC 4 cut(s) 377, 886, 1768, 2834
AccB7I CCANNNNNTGG 2 cut(s) 2357, 2645
AccBSI CCGCTC 1 cut(s) 1766
AccI GTMKAC 2 cut(s) 178, 2682
AciI CCGC 6 cut(s) 951, 1228, 1412, 1766, 1779, 1833
AclWI GGATC 6 cut(s) 101, 228, 241, 517, 1012, 2626
AcoI YGGCCR 1 cut(s) 2202
AcsI RAATTY 6 cut(s) 450, 560, 726, 892, 1510, 2239
AcuI CTGAAG 2 cut(s) 467, 1791
AcyI GRCGYC 1 cut(s) 165
AfaI GTAC 5 cut(s) 714, 1110, 1770, 2117, 2672
AflII CTTAAG 1 cut(s) 268
AflIII ACRYGT 3 cut(s) 2169, 2530, 2739
AhlI ACTAGT 2 cut(s) 1475, 1912
AjnI CCWGG 1 cut(s) 114
AjuI GAANNNNNNNTTGG 4 cut(s) 194, 226, 1709, 1741
Alw21I GWGCWC 1 cut(s) 2887
Alw26I GTCTC 5 cut(s) 37, 53, 982, 1933, 1971
AlwI GGATC 6 cut(s) 101, 228, 241, 517, 1012, 2626
AlwNI CAGNNNCTG 1 cut(s) 1814
Ama87I CYCGRG 1 cut(s) 554
AoxI GGCC 3 cut(s) 810, 1426, 2202
ApeKI GCWGC 3 cut(s) 1210, 2186, 2633
ApoI RAATTY 6 cut(s) 450, 560, 726, 892, 1510, 2239
ArsI GACNNNNNNTTYG 4 cut(s) 478, 510, 956, 988
Asp700I GAANNNNTTC 1 cut(s) 141
Asp718I GGTACC 1 cut(s) 1768
AspA2I CCTAGG 1 cut(s) 1087
AspLEI GCGC 1 cut(s) 3006
AspS9I GGNCC 2 cut(s) 810, 1622
AsuC2I CCSGG 3 cut(s) 1933, 2180, 2675
AsuHPI GGTGA 4 cut(s) 160, 208, 974, 2528
AsuNHI GCTAGC 1 cut(s) 79
AvaI CYCGRG 1 cut(s) 554
AvaII GGWCC 1 cut(s) 1622
AvrII CCTAGG 1 cut(s) 1087
BamHI GGATCC 1 cut(s) 233
BanI GGYRCC 4 cut(s) 377, 886, 1768, 2834
BanII GRGCYC 1 cut(s) 218
BarI GAAGNNNNNNTAC 2 cut(s) 655, 687
BbsI GAAGAC 4 cut(s) 507, 731, 1841, 2783
Bbv12I GWGCWC 1 cut(s) 2887
BbvI GCAGC 3 cut(s) 1222, 2198, 2620
BccI CCATC 9 cut(s) 45, 751, 821, 953, 1276, 1483, 2060, 2359, 2507
BceAI ACGGC 1 cut(s) 178
BciT130I CCWGG 1 cut(s) 116
BciVI GTATCC 1 cut(s) 2674
BclI TGATCA 2 cut(s) 987, 2734
BcnI CCSGG 3 cut(s) 1933, 2180, 2675
BcoDI GTCTC 5 cut(s) 37, 53, 982, 1933, 1971
BcuI ACTAGT 2 cut(s) 1475, 1912
BfmI CTRYAG 3 cut(s) 172, 567, 2683
BfrI CTTAAG 1 cut(s) 268
BfuAI ACCTGC 3 cut(s) 179, 334, 1158
BfuI GTATCC 1 cut(s) 2674
BglII AGATCT 1 cut(s) 2250
BisI GCNGC 3 cut(s) 1211, 2187, 2634
BlnI CCTAGG 1 cut(s) 1087
BlsI GCNGC 3 cut(s) 1212, 2188, 2635
Bme1390I CCNGG 4 cut(s) 116, 1933, 2180, 2675
Bme18I GGWCC 1 cut(s) 1622
BmeT110I CYCGRG 1 cut(s) 554
BmgT120I GGNCC 2 cut(s) 810, 1622
BmiI GGNNCC 9 cut(s) 235, 379, 542, 811, 888, 1623, 1624, 1770, 2836
BmrFI CCNGG 4 cut(s) 116, 1933, 2180, 2675
BmrI ACTGGG 2 cut(s) 816, 1554
BmsI GCATC 5 cut(s) 1128, 1200, 1344, 2356, 2990
BmtI GCTAGC 1 cut(s) 83
BmuI ACTGGG 2 cut(s) 816, 1554
BpiI GAAGAC 4 cut(s) 507, 731, 1841, 2783
BpuEI CTTGAG 5 cut(s) 772, 988, 1669, 1733, 2474
BpuMI CCSGG 3 cut(s) 1933, 2180, 2675
BsaAI YACGTR 1 cut(s) 2670
BsaBI GATNNNNATC 1 cut(s) 238
BsaHI GRCGYC 1 cut(s) 165
BsaJI CCNNGG 4 cut(s) 831, 1087, 1567, 2179
Bse3DI GCAATG 4 cut(s) 74, 763, 2293, 2415
Bse8I GATNNNNATC 1 cut(s) 238
BseBI CCWGG 1 cut(s) 116
BseDI CCNNGG 4 cut(s) 831, 1087, 1567, 2179
BseGI GGATG 9 cut(s) 37, 666, 813, 1119, 1191, 1335, 2347, 2518, 2683
BseJI GATNNNNATC 1 cut(s) 238
BseMI GCAATG 4 cut(s) 74, 763, 2293, 2415
BseMII CTCAG 5 cut(s) 455, 993, 1866, 2068, 2577
BseRI GAGGAG 2 cut(s) 306, 2042
BseXI GCAGC 3 cut(s) 1222, 2198, 2620
BseYI CCCAGC 1 cut(s) 205
BsgI GTGCAG 1 cut(s) 2619
Bsh1285I CGRYCG 1 cut(s) 2475
BshFI GGCC 3 cut(s) 812, 1428, 2204
BshNI GGYRCC 4 cut(s) 377, 886, 1768, 2834
BsiEI CGRYCG 1 cut(s) 2475
BsiHKAI GWGCWC 1 cut(s) 2887
BsiHKCI CYCGRG 1 cut(s) 554
BsiSI CCGG 3 cut(s) 1932, 2179, 2674
BslFI GGGAC 3 cut(s) 1054, 1635, 1962
BsmAI GTCTC 5 cut(s) 37, 53, 982, 1933, 1971
BsmBI CGTCTC 1 cut(s) 53
BsmFI GGGAC 3 cut(s) 1054, 1635, 1962
BsmI GAATGC 4 cut(s) 594, 920, 1263, 1798
BsnI GGCC 3 cut(s) 812, 1428, 2204
BsoBI CYCGRG 1 cut(s) 554
Bsp1286I GDGCHC 2 cut(s) 218, 2887
Bsp1407I TGTACA 2 cut(s) 712, 2115
BspACI CCGC 6 cut(s) 951, 1228, 1412, 1766, 1779, 1833
BspANI GGCC 3 cut(s) 812, 1428, 2204
BspCNI CTCAG 5 cut(s) 456, 992, 1867, 2067, 2576
BspLI GGNNCC 9 cut(s) 235, 379, 542, 811, 888, 1623, 1624, 1770, 2836
BspMAI CTGCAG 1 cut(s) 176
BspMI ACCTGC 3 cut(s) 179, 334, 1158
BspOI GCTAGC 1 cut(s) 83
BspPI GGATC 6 cut(s) 101, 228, 241, 517, 1012, 2626
BspT107I GGYRCC 4 cut(s) 377, 886, 1768, 2834
BspTI CTTAAG 1 cut(s) 268
BsrBI CCGCTC 1 cut(s) 1766
BsrDI GCAATG 4 cut(s) 74, 763, 2293, 2415
BsrGI TGTACA 2 cut(s) 712, 2115
BssECI CCNNGG 4 cut(s) 831, 1087, 1567, 2179
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 831, 1087
Bst2UI CCWGG 1 cut(s) 116
Bst4CI ACNGT 1 cut(s) 1707
Bst6I CTCTTC 1 cut(s) 2892
BstACI GRCGYC 1 cut(s) 165
BstAFI CTTAAG 1 cut(s) 268
BstAPI GCANNNNNTGC 1 cut(s) 340
BstAUI TGTACA 2 cut(s) 712, 2115
BstBAI YACGTR 1 cut(s) 2670
BstC8I GCNNGC 3 cut(s) 72, 81, 1868
BstEII GGTNACC 1 cut(s) 2516
BstF5I GGATG 9 cut(s) 37, 666, 813, 1119, 1191, 1335, 2347, 2518, 2683
BstHHI GCGC 1 cut(s) 3006
BstMAI GTCTC 5 cut(s) 37, 53, 982, 1933, 1971
BstMCI CGRYCG 1 cut(s) 2475
BstMWI GCNNNNNNNGC 7 cut(s) 76, 80, 89, 171, 340, 1219, 1820
BstNI CCWGG 1 cut(s) 116
BstNSI RCATGY 5 cut(s) 2173, 2265, 2534, 2743, 2937
BstPI GGTNACC 1 cut(s) 2516
BstSCI CCNGG 4 cut(s) 114, 1931, 2178, 2673
BstSFI CTRYAG 3 cut(s) 172, 567, 2683
BstV1I GCAGC 3 cut(s) 1222, 2198, 2620
BstV2I GAAGAC 4 cut(s) 507, 731, 1841, 2783
BstX2I RGATCY 4 cut(s) 233, 522, 1017, 2250
BstXI CCANNNNNNTGG 2 cut(s) 1424, 2440
BstYI RGATCY 4 cut(s) 233, 522, 1017, 2250
BsuI GTATCC 1 cut(s) 2674
BsuRI GGCC 3 cut(s) 812, 1428, 2204
BtgZI GCGATG 1 cut(s) 170
BtsCI GGATG 9 cut(s) 37, 666, 813, 1119, 1191, 1335, 2347, 2518, 2683
BtsIMutI CAGTG 7 cut(s) 715, 876, 1367, 2440, 2730, 2847, 2977
BveI ACCTGC 3 cut(s) 179, 334, 1158
Cac8I GCNNGC 3 cut(s) 72, 81, 1868
CaiI CAGNNNCTG 1 cut(s) 1814
CfoI GCGC 1 cut(s) 3006
Cfr13I GGNCC 2 cut(s) 810, 1622
CseI GACGC 2 cut(s) 154, 2861
CsiI ACCWGGT 1 cut(s) 114
Csp6I GTAC 5 cut(s) 713, 1109, 1769, 2116, 2671
CspCI CAANNNNNGTGG 6 cut(s) 828, 863, 1186, 1221, 1792, 1827
CviQI GTAC 5 cut(s) 713, 1109, 1769, 2116, 2671
EaeI YGGCCR 1 cut(s) 2202
Eam1104I CTCTTC 1 cut(s) 2892
EarI CTCTTC 1 cut(s) 2892
Eco130I CCWWGG 2 cut(s) 831, 1087
Eco24I GRGCYC 1 cut(s) 218
Eco32I GATATC 1 cut(s) 2968
Eco47I GGWCC 1 cut(s) 1622
Eco57I CTGAAG 2 cut(s) 467, 1791
Eco88I CYCGRG 1 cut(s) 554
Eco91I GGTNACC 1 cut(s) 2516
EcoO109I RGGNCCY 1 cut(s) 1622
EcoO65I GGTNACC 1 cut(s) 2516
EcoRII CCWGG 1 cut(s) 114
EcoRV GATATC 1 cut(s) 2968
EcoT14I CCWWGG 2 cut(s) 831, 1087
EcoT38I GRGCYC 1 cut(s) 218
ErhI CCWWGG 2 cut(s) 831, 1087
Esp3I CGTCTC 1 cut(s) 53
FalI AAGNNNNNCTT 8 cut(s) 194, 226, 723, 755, 1789, 1821, 2112, 2144
FaqI GGGAC 3 cut(s) 1054, 1635, 1962
FbaI TGATCA 2 cut(s) 987, 2734
FblI GTMKAC 2 cut(s) 178, 2682
Fnu4HI GCNGC 3 cut(s) 1211, 2187, 2634
FokI GGATG 9 cut(s) 24, 653, 800, 1106, 1178, 1322, 2334, 2525, 2690
FriOI GRGCYC 1 cut(s) 218
Fsp4HI GCNGC 3 cut(s) 1211, 2187, 2634
GlaI GCGC 1 cut(s) 3005
GluI GCNGC 3 cut(s) 1211, 2187, 2634
GsaI CCCAGC 1 cut(s) 209
HaeIII GGCC 3 cut(s) 812, 1428, 2204
HapII CCGG 3 cut(s) 1932, 2179, 2674
HgaI GACGC 2 cut(s) 154, 2861
HhaI GCGC 1 cut(s) 3006
Hin1I GRCGYC 1 cut(s) 165
Hin6I GCGC 1 cut(s) 3004
HinP1I GCGC 1 cut(s) 3004
HincII GTYRAC 2 cut(s) 179, 1296
HindII GTYRAC 2 cut(s) 179, 1296
HindIII AAGCTT 3 cut(s) 262, 479, 1868
HpaI GTTAAC 1 cut(s) 1296
HpaII CCGG 3 cut(s) 1932, 2179, 2674
HphI GGTGA 4 cut(s) 160, 208, 974, 2528
Hpy166II GTNNAC 9 cut(s) 179, 713, 1296, 1520, 1938, 2116, 2308, 2683, 2715
Hpy8I GTNNAC 9 cut(s) 179, 713, 1296, 1520, 1938, 2116, 2308, 2683, 2715
Hpy99I CGWCG 1 cut(s) 183
HpyCH4III ACNGT 1 cut(s) 1707
HpyCH4IV ACGT 2 cut(s) 1043, 2669
HpyF10VI GCNNNNNNNGC 7 cut(s) 76, 80, 89, 171, 340, 1219, 1820
HpySE526I ACGT 2 cut(s) 1043, 2669
Hsp92I GRCGYC 1 cut(s) 165
HspAI GCGC 1 cut(s) 3004
KflI GGGWCCC 1 cut(s) 1622
KpnI GGTACC 1 cut(s) 1772
Ksp22I TGATCA 2 cut(s) 987, 2734
KspAI GTTAAC 1 cut(s) 1296
LmnI GCTCC 6 cut(s) 26, 1260, 1763, 2183, 2328, 2606
Lsp1109I GCAGC 3 cut(s) 1222, 2198, 2620
LweI GCATC 5 cut(s) 1128, 1200, 1344, 2356, 2990
MabI ACCWGGT 1 cut(s) 114
MaeII ACGT 2 cut(s) 1043, 2669
MaeIII GTNAC 9 cut(s) 118, 166, 196, 962, 2172, 2371, 2516, 2747, 2845
MbiI CCGCTC 1 cut(s) 1766
MfeI CAATTG 1 cut(s) 29
MflI RGATCY 4 cut(s) 233, 522, 1017, 2250
MhlI GDGCHC 2 cut(s) 218, 2887
MlyI GAGTC 5 cut(s) 39, 1152, 1821, 1886, 2902
MmeI TCCRAC 2 cut(s) 423, 891
MroXI GAANNNNTTC 1 cut(s) 141
MslI CAYNNNNRTG 1 cut(s) 2769
MspCI CTTAAG 1 cut(s) 268
MspI CCGG 3 cut(s) 1932, 2179, 2674
MspR9I CCNGG 4 cut(s) 116, 1933, 2180, 2675
MunI CAATTG 1 cut(s) 29
Mva1269I GAATGC 4 cut(s) 594, 920, 1263, 1798
MvaI CCWGG 1 cut(s) 116
MwoI GCNNNNNNNGC 7 cut(s) 76, 80, 89, 171, 340, 1219, 1820
NciI CCSGG 3 cut(s) 1933, 2180, 2675
NheI GCTAGC 1 cut(s) 79
NlaIV GGNNCC 9 cut(s) 235, 379, 542, 811, 888, 1623, 1624, 1770, 2836
NmeAIII GCCGAG 1 cut(s) 1548
NmuCI GTSAC 7 cut(s) 118, 166, 196, 962, 2516, 2747, 2845
NspI RCATGY 5 cut(s) 2173, 2265, 2534, 2743, 2937
PaeR7I CTCGAG 1 cut(s) 554
PaqCI CACCTGC 1 cut(s) 179
PciI ACATGT 3 cut(s) 2169, 2530, 2739
PcsI WCGNNNNNNNCGW 1 cut(s) 1575
PctI GAATGC 4 cut(s) 594, 920, 1263, 1798
PdmI GAANNNNTTC 1 cut(s) 141
PfeI GAWTC 8 cut(s) 901, 1138, 1657, 1717, 2124, 2758, 2813, 2945
PflMI CCANNNNNTGG 2 cut(s) 2357, 2645
PkrI GCNGC 3 cut(s) 1212, 2188, 2635
Ple19I CGATCG 1 cut(s) 2475
PleI GAGTC 5 cut(s) 39, 1152, 1821, 1885, 2902
PpsI GAGTC 5 cut(s) 39, 1152, 1821, 1885, 2902
Ppu21I YACGTR 1 cut(s) 2670
PpuMI RGGWCCY 1 cut(s) 1622
PscI ACATGT 3 cut(s) 2169, 2530, 2739
Psp5II RGGWCCY 1 cut(s) 1622
Psp6I CCWGG 1 cut(s) 114
PspEI GGTNACC 1 cut(s) 2516
PspFI CCCAGC 1 cut(s) 205
PspGI CCWGG 1 cut(s) 114
PspN4I GGNNCC 9 cut(s) 235, 379, 542, 811, 888, 1623, 1624, 1770, 2836
PspPI GGNCC 2 cut(s) 810, 1622
PspPPI RGGWCCY 1 cut(s) 1622
PstI CTGCAG 1 cut(s) 176
PstNI CAGNNNCTG 1 cut(s) 1814
PsuI RGATCY 4 cut(s) 233, 522, 1017, 2250
PvuI CGATCG 1 cut(s) 2475
RsaI GTAC 5 cut(s) 714, 1110, 1770, 2117, 2672
RsaNI GTAC 5 cut(s) 713, 1109, 1769, 2116, 2671
RseI CAYNNNNRTG 1 cut(s) 2769
SalI GTCGAC 1 cut(s) 177
SatI GCNGC 3 cut(s) 1211, 2187, 2634
Sau96I GGNCC 2 cut(s) 810, 1622
SchI GAGTC 5 cut(s) 39, 1152, 1821, 1886, 2902
ScrFI CCNGG 4 cut(s) 116, 1933, 2180, 2675
SduI GDGCHC 2 cut(s) 218, 2887
SexAI ACCWGGT 1 cut(s) 114
SfaNI GCATC 5 cut(s) 1128, 1200, 1344, 2356, 2990
SfcI CTRYAG 3 cut(s) 172, 567, 2683
Sfr274I CTCGAG 1 cut(s) 554
SinI GGWCC 1 cut(s) 1622
SlaI CTCGAG 1 cut(s) 554
SmiMI CAYNNNNRTG 1 cut(s) 2769
SmlI CTYRAG 7 cut(s) 268, 554, 751, 967, 1648, 1712, 2489
SmoI CTYRAG 7 cut(s) 268, 554, 751, 967, 1648, 1712, 2489
SpeI ACTAGT 2 cut(s) 1475, 1912
SsiI CCGC 6 cut(s) 951, 1228, 1412, 1766, 1779, 1833
StyD4I CCNGG 4 cut(s) 114, 1931, 2178, 2673
StyI CCWWGG 2 cut(s) 831, 1087
TaaI ACNGT 1 cut(s) 1707
TaiI ACGT 2 cut(s) 1046, 2672
TaqI TCGA 6 cut(s) 48, 178, 555, 1660, 1852, 2236
TatI WGTACW 3 cut(s) 712, 1108, 2115
TfiI GAWTC 8 cut(s) 901, 1138, 1657, 1717, 2124, 2758, 2813, 2945
TscAI CASTG 7 cut(s) 715, 883, 1367, 2440, 2737, 2854, 2977
TseFI GTSAC 7 cut(s) 118, 166, 196, 962, 2516, 2747, 2845
TseI GCWGC 3 cut(s) 1210, 2186, 2633
Tsp45I GTSAC 7 cut(s) 118, 166, 196, 962, 2516, 2747, 2845
TspGWI ACGGA 3 cut(s) 77, 775, 913
TspRI CASTG 7 cut(s) 715, 883, 1367, 2440, 2737, 2854, 2977
Van91I CCANNNNNTGG 2 cut(s) 2357, 2645
Vha464I CTTAAG 1 cut(s) 268
VpaK11BI GGWCC 1 cut(s) 1622
XapI RAATTY 6 cut(s) 450, 560, 726, 892, 1510, 2239
XbaI TCTAGA 1 cut(s) 1324
XceI RCATGY 5 cut(s) 2173, 2265, 2534, 2743, 2937
XhoI CTCGAG 1 cut(s) 554
XmaJI CCTAGG 1 cut(s) 1087
XmiI GTMKAC 2 cut(s) 178, 2682
XmnI GAANNNNTTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.