RLG00000026741
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
5444088 .. 5490361
46274 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026741

Sequence Viewer

Length: 3054 bp
ATGACCTCATCATACTTTTTTTCCAATGTACTAGCACTAATACTAGTACTAGCAATTGCTTTTTTTTGTTGCTGCAGCTCCATGGCCTCAAGCAATAGGTTAGCACTCAGAGGAGGCAACGAGACAGATAGGCTGGCATTGCTTGCCATTAAAGCTCAAATACACCAAAATCCCAACCGGCCGGTCATGAGCTCGTGGAATAAGTCCACTCATTTTTGCAACTGGCATGGTGTCACCTGCAGCCGAAGCCATCTTCAGAGGGTCATTAAGCTGAAACTAACCTCCGTGAAGTTATCCGGGTCCATATCTCCTCACATAGGAAACCTGAGCTTCCTAAGGGATCTAAGCCTCTATAATAATAGCCTCACCAACAAAATTCCTCCAGAAATTGGGCTCTTGCGGAGGTTGCGGAAATTACGTCTAGAAACTAACTCACTCAATGGTCCTATTCCTGCCGATATCTCCAAATGCTCCAGACTCATTGTTCTCGATGTTAGTTACAACATGCTGGTACGTAACATTCCTCCAGAACTTGGCTCCTTGTCTAAGCTTGAGTATCTTAGTTTGCTATTTAATAATCTAACAGGAGAGATACCTCCCTCCTTGGGTAACCTTTCTAGTCTTGGCTCACTTGATGCTTATAGTAATAACTTGGTGGGAAGTATTCCTAGTTCTCTAGGCCAACTGAAAAAATTAACACATTTCTCATTGGAATCAAATAAGTTGTCTGGTACCATCCCTCCCTCCATCTTTAACATCTCTAGTCTCGTTGGATTTATCATAGGAATAAACCAAATTCAAGGGAGCATGCCCCCAACCTTGTTCAGAACCCTTTTGAATCTCAAATATTTTTGCATTTCCGATAATCAGTTTACTGGATCACTTCCTCTGTCAATAAGCAATGCCACTAATTTAGTGCATTTTTATGTTGAGGATAACCAAATAATAGGGCAAGTGCCAAATTTACAAAAGCTTCGTACCCTTGTGATATTCTATATTGCTGGTAATCATCTCGGAAGTGGCAGTGATGGGGACTTGAGTTTTTTCTCAGACTTGACCAATGCTACACAGTTGGTGTGGTTGGCTGCAGATACCAACAACTTCGGAGGGACGTTGCCCGCATCAGTATCCAATCTCTCAACCAACCTTGCACTTCTCCATGTCCAAGAAAACCAATTACATGGAAGCATCCCTGCAGGGATAGTGAATCTGGTCAACATGGAATCATTGGTTTTGTCTGATAACATGTTCACAGGTAACATCCCCACTGGTATCGGGAAACTTTCAGGTCTTGGGGAATTGGGTTTTCAAAACAACAGATTATCAGGGAGCCTCCCATCCTCTCTAGGAAATCTGACATCATTACTTCATCTCGAATTGCAAGGAAATAATTTTAATGGCGTCATCCCTACAAGCCTTGGGGAATGCCATTCATTGCTAGTGCTTGATCTTTCACGCAATAATCTTAGTGGCAACATACCTCCACAAGTTATTGGTGTTCCTTCTTTATCAATATCTTTGAACTTGTCTGAAAATCGTCTCAATGGTTCCCTTCCCTTGGAGCTAGGAAAGTTAAAAAGTCTAGGTGAGTTTGATCTCTCTAATAATATGATATCAGGAAAACTTCCTAGTAGCATTGGTAGTTGCCTGAGTTTAGAAATCCTGCTCTTGCAAGGAAACTTCTTTGACGGCTCCATTCCTTCGGCTATGGTTTCCTTGAGAGGGATTCGAGATTTAGACCTTTCACGCAATAATCTCTCCGGTGAAATTCCTGAATTTCTGGCGGGGTTTGGAGGCTTGAAGCAACTTAACCTGTCTTTCAATGACTTTTGGGGTGCAGTACCAGTTAAAGGTGTCTTTAACAATGCAAGTGCCACTTCAGTCGTCGGAAACACTAGGCTCTGCGGAGGTATTTCTGAATTTCAGCTTCCAAAGTGCAAGTCTAAAGAATCGAGGTCTCGTAGCATGAAACTAACAATCTTATTAGTATCAGCATTCACACTTCTTGGAATAGCTATGCTGCTCACATTTCTGTTTCTTTGTTTCTCCAAAAAGAAATGCAAAGTAACTTCATCAAGCACATTTGCGGACTCTATTTTGCAAGTGTCCTATAATACTCTCTTGAAAGCTACTGATGGCTTCTCTGCAACAAATTTGATTGGTGCGGGTAGTTTTGGGTCTGTCTACAAAGGAGTTCTCGGCGAAGATGGAGCTCAGGTTGTTGCTGTGAAGGTGTTTAACATGTTACGCCGGGGAGCTTCCAAGAGTTTCCTAGCCGAAAGTGAGGCACTCAGAAATATCAGACACCGAAATCTAGTCCCGATTATAACTGCATGTTCGAGTGTTGACTTTCGTGGTAATGATTTCAAAGCTTTGGTTTACGAGTTCATGGAGAATGGGAGCTTAGAGGAGTGGCTGCATCCAACTACTGGGACAGAAGACGCACTGATGAATTTAAGTCTCGTTCAGAGGCTAGACATTGCCATTGACGTTGCTTGTGCACTGGATTATCTTCATAATCATTGCGAAACACCAATAGTTCATTGTGATCTCAAGCCGAGCAATGTTCTTTTGGACAATTACTTGACTGGACATGTTGCTGACTTTGGATTAGCTAGATTCCTCTCAAGACTAGCCAATAACGTTTCAGCAAATCAATCAAGTTCCATTGGAATAAGAGGGACTGTTGGTTATGCTGCTCCAGAGTACGGAATGGGAAGTGAGGCGTCAACATATGGAGATGTCTACAGCTTCGGCATTCTCTTGTTAGAGATGTTTACAGGAAAGAGACCCACTGACCACATGTTTGTAGACGGTTTGAACCTTCACAAGTTTGTGGAAATGGCCTTCCCCGAGCGAGTTTCAGAGATTGCAGATTCATCACTTGTTCAAGTAGGCAATCCCAGCCAGAGCACCAATAATGTTGTCGAGGAATGCTTGAGTCCAATACTAGGAATTGGAGTTGCAAGCTCTATGGAATCCCCAACAGACCGAAAGAATGTTGGTGATGCTGTATCTGAACTGAAAAAGATTCGAGCCACACTTGTTAGATAG

Protein Analysis

1018

Amino Acids

109.75

Weight (kDa)

7.81

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 81 4.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 81 - 190 3.5e-09 Leucine-rich repeat region
LRR_14 PF23598 177 - 256 3e-06 Leucine-rich repeat region
LRR_14 PF23598 471 - 604 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 551 - 610 3.8e-06 Leucine rich repeat
Pkinase PF00069 716 - 980 3.4e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 935 2.6e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2327
AarI CACCTGC 1 cut(s) 245
Acc36I ACCTGC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 1 cut(s) 731
AccB7I CCANNNNNTGG 3 cut(s) 389, 533, 2429
AccI GTMKAC 3 cut(s) 2184, 2745, 2811
AciI CCGC 7 cut(s) 400, 409, 1119, 1784, 1905, 2087, 2165
AclI AACGTT 1 cut(s) 2643
AclWI GGATC 2 cut(s) 348, 886
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 8 cut(s) 375, 795, 961, 1767, 1775, 1919, 2152, 2452
AcuI CTGAAG 2 cut(s) 239, 1863
AcyI GRCGYC 2 cut(s) 1401, 2726
AfaI GTAC 7 cut(s) 30, 48, 513, 733, 979, 1842, 2708
AflIII ACRYGT 4 cut(s) 1245, 2241, 2593, 2802
AhlI ACTAGT 1 cut(s) 43
Alw21I GWGCWC 4 cut(s) 194, 2215, 2503, 2915
Alw26I GTCTC 6 cut(s) 116, 770, 1544, 1962, 2465, 2782
Alw44I GTGCAC 1 cut(s) 2499
AlwI GGATC 2 cut(s) 348, 886
Ama87I CYCGRG 1 cut(s) 2852
AoxI GGCC 4 cut(s) 84, 179, 679, 2844
ApaLI GTGCAC 1 cut(s) 2499
ApeKI GCWGC 7 cut(s) 72, 75, 240, 1085, 2020, 2416, 2696
ApoI RAATTY 8 cut(s) 375, 795, 961, 1767, 1775, 1919, 2152, 2452
ArsI GACNNNNNNTTYG 6 cut(s) 710, 742, 1925, 1957, 2789, 2821
Asp718I GGTACC 1 cut(s) 731
AspS9I GGNCC 2 cut(s) 300, 443
AsuC2I CCSGG 2 cut(s) 298, 2252
AsuHPI GGTGA 5 cut(s) 226, 358, 1598, 1775, 3017
AvaI CYCGRG 1 cut(s) 2852
AvaII GGWCC 2 cut(s) 300, 443
AxyI CCTNAGG 1 cut(s) 335
BaeGI GKGCMC 1 cut(s) 2503
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 3 cut(s) 194, 396, 2215
BauI CACGAG 1 cut(s) 193
BbsI GAAGAC 1 cut(s) 2445
Bbv12I GWGCWC 4 cut(s) 194, 2215, 2503, 2915
BbvI GCAGC 7 cut(s) 59, 87, 252, 1072, 2007, 2403, 2683
BccI CCATC 7 cut(s) 258, 743, 755, 1022, 1345, 2129, 2201
BceAI ACGGC 1 cut(s) 1705
BciVI GTATCC 1 cut(s) 1138
BcnI CCSGG 2 cut(s) 298, 2252
BcoDI GTCTC 6 cut(s) 116, 770, 1544, 1962, 2465, 2782
BcuI ACTAGT 1 cut(s) 43
BfmI CTRYAG 5 cut(s) 73, 238, 1086, 1194, 2746
BfuAI ACCTGC 1 cut(s) 245
BfuI GTATCC 1 cut(s) 1138
BisI GCNGC 7 cut(s) 73, 76, 241, 1086, 2021, 2417, 2697
BlsI GCNGC 7 cut(s) 74, 77, 242, 1087, 2022, 2418, 2698
BmcAI AGTACT 1 cut(s) 48
Bme1390I CCNGG 2 cut(s) 298, 2252
Bme18I GGWCC 2 cut(s) 300, 443
BmeT110I CYCGRG 1 cut(s) 2852
BmgT120I GGNCC 2 cut(s) 300, 443
BmiI GGNNCC 6 cut(s) 301, 538, 733, 1331, 1549, 1693
BmrFI CCNGG 2 cut(s) 298, 2252
BmrI ACTGGG 1 cut(s) 2439
BmsI GCATC 5 cut(s) 625, 1130, 1197, 2428, 2998
BmuI ACTGGG 1 cut(s) 2439
BpiI GAAGAC 1 cut(s) 2445
BpmI CTGGAG 4 cut(s) 366, 457, 510, 2685
Bpu10I CCTNAGC 2 cut(s) 326, 2214
BpuEI CTTGAG 7 cut(s) 73, 572, 1057, 1738, 2537, 2611, 2959
BpuMI CCSGG 2 cut(s) 298, 2252
BsaAI YACGTR 1 cut(s) 515
BsaHI GRCGYC 2 cut(s) 1401, 2726
BsaI GGTCTC 2 cut(s) 1962, 2782
BsaJI CCNNGG 5 cut(s) 81, 603, 1417, 1557, 2251
BsaWI WCCGGW 1 cut(s) 1760
BsaXI ACNNNNNCTCC 4 cut(s) 724, 754, 2202, 2232
Bse118I RCCGGY 2 cut(s) 177, 181
Bse1I ACTGG 7 cut(s) 227, 880, 1273, 1844, 2434, 2508, 2593
Bse21I CCTNAGG 1 cut(s) 335
Bse3DI GCAATG 6 cut(s) 137, 907, 1433, 2478, 2521, 2569
BseDI CCNNGG 5 cut(s) 81, 603, 1417, 1557, 2251
BseGI GGATG 6 cut(s) 735, 1188, 1260, 1337, 1404, 2419
BseMI GCAATG 6 cut(s) 137, 907, 1433, 2478, 2521, 2569
BseMII CTCAG 6 cut(s) 121, 317, 1062, 1640, 2228, 2305
BseNI ACTGG 7 cut(s) 227, 880, 1273, 1844, 2434, 2508, 2593
BseRI GAGGAG 3 cut(s) 126, 300, 2423
BseSI GKGCMC 1 cut(s) 2503
BseX3I CGGCCG 1 cut(s) 179
BseXI GCAGC 7 cut(s) 59, 87, 252, 1072, 2007, 2403, 2683
BseYI CCCAGC 1 cut(s) 2903
BsgI GTGCAG 1 cut(s) 1857
Bsh1285I CGRYCG 1 cut(s) 182
BshFI GGCC 4 cut(s) 86, 181, 681, 2846
BshNI GGYRCC 1 cut(s) 731
BsiEI CGRYCG 1 cut(s) 182
BsiHKAI GWGCWC 4 cut(s) 194, 2215, 2503, 2915
BsiHKCI CYCGRG 1 cut(s) 2852
BsiSI CCGG 5 cut(s) 178, 182, 297, 1761, 2251
BslFI GGGAC 5 cut(s) 1046, 1123, 2303, 2446, 2695
BsmAI GTCTC 6 cut(s) 116, 770, 1544, 1962, 2465, 2782
BsmBI CGTCTC 1 cut(s) 1544
BsmFI GGGAC 5 cut(s) 1046, 1123, 2303, 2446, 2695
BsmI GAATGC 4 cut(s) 1430, 1994, 2757, 2939
BsnI GGCC 4 cut(s) 86, 181, 681, 2846
Bso31I GGTCTC 2 cut(s) 1962, 2782
BsoBI CYCGRG 1 cut(s) 2852
Bsp1286I GDGCHC 5 cut(s) 194, 396, 2215, 2503, 2915
Bsp143I GATC 5 cut(s) 340, 878, 1447, 1594, 2548
Bsp19I CCATGG 1 cut(s) 81
BspACI CCGC 7 cut(s) 400, 409, 1119, 1784, 1905, 2087, 2165
BspANI GGCC 4 cut(s) 86, 181, 681, 2846
BspCNI CTCAG 6 cut(s) 120, 318, 1061, 1641, 2227, 2304
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 6 cut(s) 301, 538, 733, 1331, 1549, 1693
BspMAI CTGCAG 4 cut(s) 77, 242, 1090, 1198
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 2 cut(s) 348, 886
BspT107I GGYRCC 1 cut(s) 731
BspTNI GGTCTC 2 cut(s) 1962, 2782
BsrDI GCAATG 6 cut(s) 137, 907, 1433, 2478, 2521, 2569
BsrFI RCCGGY 2 cut(s) 177, 181
BsrI ACTGG 7 cut(s) 227, 880, 1273, 1844, 2434, 2508, 2593
BssAI RCCGGY 2 cut(s) 177, 181
BssECI CCNNGG 5 cut(s) 81, 603, 1417, 1557, 2251
BssMI GATC 5 cut(s) 340, 878, 1447, 1594, 2548
BssNI GRCGYC 2 cut(s) 1401, 2726
BssSI CACGAG 1 cut(s) 193
BssT1I CCWWGG 4 cut(s) 81, 603, 1417, 1557
Bst2BI CACGAG 1 cut(s) 193
Bst4CI ACNGT 3 cut(s) 1071, 2686, 2816
BstACI GRCGYC 2 cut(s) 1401, 2726
BstAPI GCANNNNNTGC 1 cut(s) 143
BstBAI YACGTR 1 cut(s) 515
BstC8I GCNNGC 5 cut(s) 135, 144, 809, 1119, 2968
BstDSI CCRYGG 1 cut(s) 81
BstEII GGTNACC 1 cut(s) 608
BstENI CCTNNNNNAGG 1 cut(s) 315
BstF5I GGATG 6 cut(s) 735, 1188, 1260, 1337, 1404, 2419
BstKTI GATC 5 cut(s) 343, 881, 1450, 1597, 2551
BstMAI GTCTC 6 cut(s) 116, 770, 1544, 1962, 2465, 2782
BstMBI GATC 5 cut(s) 340, 878, 1447, 1594, 2548
BstMCI CGRYCG 1 cut(s) 182
BstMWI GCNNNNNNNGC 6 cut(s) 139, 143, 152, 246, 406, 2904
BstNSI RCATGY 7 cut(s) 508, 811, 1249, 2245, 2337, 2597, 2806
BstPI GGTNACC 1 cut(s) 608
BstSCI CCNGG 2 cut(s) 296, 2250
BstSFI CTRYAG 5 cut(s) 73, 238, 1086, 1194, 2746
BstSLI GKGCMC 1 cut(s) 2503
BstSNI TACGTA 1 cut(s) 515
BstV1I GCAGC 7 cut(s) 59, 87, 252, 1072, 2007, 2403, 2683
BstV2I GAAGAC 1 cut(s) 2445
BstX2I RGATCY 1 cut(s) 340
BstXI CCANNNNNNTGG 1 cut(s) 1181
BstYI RGATCY 1 cut(s) 340
BstZI CGGCCG 1 cut(s) 179
Bsu36I CCTNAGG 1 cut(s) 335
BsuI GTATCC 1 cut(s) 1138
BsuRI GGCC 4 cut(s) 86, 181, 681, 2846
BtgI CCRYGG 1 cut(s) 81
BtsCI GGATG 6 cut(s) 735, 1188, 1260, 1337, 1404, 2419
BtsI GCAGTG 1 cut(s) 1030
BtsIMutI CAGTG 5 cut(s) 1030, 1266, 2444, 2501, 2793
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 5 cut(s) 135, 144, 809, 1119, 2968
CciI TCATGA 1 cut(s) 186
Cfr10I RCCGGY 2 cut(s) 177, 181
Cfr13I GGNCC 2 cut(s) 300, 443
CseI GACGC 3 cut(s) 1390, 2450, 2715
Csp6I GTAC 7 cut(s) 29, 47, 512, 732, 978, 1841, 2707
CviQI GTAC 7 cut(s) 29, 47, 512, 732, 978, 1841, 2707
DpnI GATC 5 cut(s) 342, 880, 1449, 1596, 2550
DpnII GATC 5 cut(s) 340, 878, 1447, 1594, 2548
EaeI YGGCCR 1 cut(s) 179
EagI CGGCCG 1 cut(s) 179
Ecl136II GAGCTC 2 cut(s) 192, 2213
EclXI CGGCCG 1 cut(s) 179
Eco105I TACGTA 1 cut(s) 515
Eco130I CCWWGG 4 cut(s) 81, 603, 1417, 1557
Eco24I GRGCYC 3 cut(s) 194, 396, 2215
Eco31I GGTCTC 2 cut(s) 1962, 2782
Eco32I GATATC 2 cut(s) 460, 1614
Eco47I GGWCC 2 cut(s) 300, 443
Eco52I CGGCCG 1 cut(s) 179
Eco53kI GAGCTC 2 cut(s) 192, 2213
Eco57I CTGAAG 2 cut(s) 239, 1863
Eco81I CCTNAGG 1 cut(s) 335
Eco88I CYCGRG 1 cut(s) 2852
Eco91I GGTNACC 1 cut(s) 608
EcoICRI GAGCTC 2 cut(s) 192, 2213
EcoNI CCTNNNNNAGG 1 cut(s) 315
EcoO65I GGTNACC 1 cut(s) 608
EcoRV GATATC 2 cut(s) 460, 1614
EcoT14I CCWWGG 4 cut(s) 81, 603, 1417, 1557
EcoT38I GRGCYC 3 cut(s) 194, 396, 2215
ErhI CCWWGG 4 cut(s) 81, 603, 1417, 1557
Esp3I CGTCTC 1 cut(s) 1544
FalI AAGNNNNNCTT 2 cut(s) 1861, 1893
FaqI GGGAC 5 cut(s) 1046, 1123, 2303, 2446, 2695
FauI CCCGC 3 cut(s) 1126, 1777, 2158
FauNDI CATATG 1 cut(s) 2734
FblI GTMKAC 3 cut(s) 2184, 2745, 2811
Fnu4HI GCNGC 7 cut(s) 73, 76, 241, 1086, 2021, 2417, 2697
FokI GGATG 6 cut(s) 722, 1175, 1247, 1324, 1391, 2406
FriOI GRGCYC 3 cut(s) 194, 396, 2215
Fsp4HI GCNGC 7 cut(s) 73, 76, 241, 1086, 2021, 2417, 2697
GluI GCNGC 7 cut(s) 73, 76, 241, 1086, 2021, 2417, 2697
GsaI CCCAGC 1 cut(s) 2907
GsuI CTGGAG 4 cut(s) 366, 457, 510, 2685
HaeIII GGCC 4 cut(s) 86, 181, 681, 2846
HapII CCGG 5 cut(s) 178, 182, 297, 1761, 2251
HgaI GACGC 3 cut(s) 1390, 2450, 2715
Hin1I GRCGYC 2 cut(s) 1401, 2726
HincII GTYRAC 3 cut(s) 1216, 2347, 2730
HindII GTYRAC 3 cut(s) 1216, 2347, 2730
HindIII AAGCTT 3 cut(s) 548, 971, 2370
HpaII CCGG 5 cut(s) 178, 182, 297, 1761, 2251
HphI GGTGA 5 cut(s) 226, 358, 1598, 1775, 3017
Hpy99I CGWCG 1 cut(s) 1889
HpyAV CCTTC 6 cut(s) 1512, 1562, 1710, 2224, 2834, 2857
HpyCH4III ACNGT 3 cut(s) 1071, 2686, 2816
HpyCH4IV ACGT 5 cut(s) 418, 514, 1112, 2490, 2643
HpyF10VI GCNNNNNNNGC 6 cut(s) 139, 143, 152, 246, 406, 2904
HpySE526I ACGT 5 cut(s) 418, 514, 1112, 2490, 2643
Hsp92I GRCGYC 2 cut(s) 1401, 2726
KpnI GGTACC 1 cut(s) 735
Kzo9I GATC 5 cut(s) 340, 878, 1447, 1594, 2548
Lsp1109I GCAGC 7 cut(s) 59, 87, 252, 1072, 2007, 2403, 2683
LweI GCATC 5 cut(s) 625, 1130, 1197, 2428, 2998
MaeII ACGT 5 cut(s) 418, 514, 1112, 2490, 2643
MaeIII GTNAC 7 cut(s) 232, 497, 515, 608, 1256, 2065, 2244
MalI GATC 5 cut(s) 342, 880, 1449, 1596, 2550
MboI GATC 5 cut(s) 340, 878, 1447, 1594, 2548
MboII GAAGA 4 cut(s) 245, 2216, 2450, 2504
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 1 cut(s) 340
MhlI GDGCHC 5 cut(s) 194, 396, 2215, 2503, 2915
MlyI GAGTC 3 cut(s) 471, 2084, 2950
MmeI TCCRAC 3 cut(s) 751, 1867, 2447
MslI CAYNNNNRTG 1 cut(s) 924
MspI CCGG 5 cut(s) 178, 182, 297, 1761, 2251
MspR9I CCNGG 2 cut(s) 298, 2252
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 4 cut(s) 1430, 1994, 2757, 2939
MwoI GCNNNNNNNGC 6 cut(s) 139, 143, 152, 246, 406, 2904
NciI CCSGG 2 cut(s) 298, 2252
NcoI CCATGG 1 cut(s) 81
NdeI CATATG 1 cut(s) 2734
NdeII GATC 5 cut(s) 340, 878, 1447, 1594, 2548
NlaIV GGNNCC 6 cut(s) 301, 538, 733, 1331, 1549, 1693
NmeAIII GCCGAG 2 cut(s) 2178, 2583
NmuCI GTSAC 1 cut(s) 232
NspI RCATGY 7 cut(s) 508, 811, 1249, 2245, 2337, 2597, 2806
PaeI GCATGC 1 cut(s) 811
PagI TCATGA 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 245
PciI ACATGT 4 cut(s) 1245, 2241, 2593, 2802
PctI GAATGC 4 cut(s) 1430, 1994, 2757, 2939
PflMI CCANNNNNTGG 3 cut(s) 389, 533, 2429
PkrI GCNGC 7 cut(s) 74, 77, 242, 1087, 2022, 2418, 2698
PleI GAGTC 3 cut(s) 471, 2084, 2949
PpsI GAGTC 3 cut(s) 471, 2084, 2949
Ppu21I YACGTR 1 cut(s) 515
PscI ACATGT 4 cut(s) 1245, 2241, 2593, 2802
PsiI TTATAA 1 cut(s) 2327
Psp124BI GAGCTC 2 cut(s) 194, 2215
Psp1406I AACGTT 1 cut(s) 2643
PspEI GGTNACC 1 cut(s) 608
PspFI CCCAGC 1 cut(s) 2903
PspN4I GGNNCC 6 cut(s) 301, 538, 733, 1331, 1549, 1693
PspPI GGNCC 2 cut(s) 300, 443
PsrI GAACNNNNNNTAC 2 cut(s) 655, 687
PstI CTGCAG 4 cut(s) 77, 242, 1090, 1198
PsuI RGATCY 1 cut(s) 340
RsaI GTAC 7 cut(s) 30, 48, 513, 733, 979, 1842, 2708
RsaNI GTAC 7 cut(s) 29, 47, 512, 732, 978, 1841, 2707
RseI CAYNNNNRTG 1 cut(s) 924
SacI GAGCTC 2 cut(s) 194, 2215
SatI GCNGC 7 cut(s) 73, 76, 241, 1086, 2021, 2417, 2697
Sau3AI GATC 5 cut(s) 340, 878, 1447, 1594, 2548
Sau96I GGNCC 2 cut(s) 300, 443
SbfI CCTGCAGG 1 cut(s) 1198
ScaI AGTACT 1 cut(s) 48
SchI GAGTC 3 cut(s) 471, 2084, 2950
ScrFI CCNGG 2 cut(s) 298, 2252
SdaI CCTGCAGG 1 cut(s) 1198
SduI GDGCHC 5 cut(s) 194, 396, 2215, 2503, 2915
SfaNI GCATC 5 cut(s) 625, 1130, 1197, 2428, 2998
SfcI CTRYAG 5 cut(s) 73, 238, 1086, 1194, 2746
SinI GGWCC 2 cut(s) 300, 443
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 7 cut(s) 88, 551, 1036, 1717, 2552, 2626, 2938
SmoI CTYRAG 7 cut(s) 88, 551, 1036, 1717, 2552, 2626, 2938
SnaBI TACGTA 1 cut(s) 515
SpeI ACTAGT 1 cut(s) 43
SphI GCATGC 1 cut(s) 811
Sse8387I CCTGCAGG 1 cut(s) 1198
SsiI CCGC 7 cut(s) 400, 409, 1119, 1784, 1905, 2087, 2165
SspI AATATT 1 cut(s) 848
SstI GAGCTC 2 cut(s) 194, 2215
StyD4I CCNGG 2 cut(s) 296, 2250
StyI CCWWGG 4 cut(s) 81, 603, 1417, 1557
TaaI ACNGT 3 cut(s) 1071, 2686, 2816
TaiI ACGT 5 cut(s) 421, 517, 1115, 2493, 2646
TaqI TCGA 7 cut(s) 489, 1374, 1729, 1952, 2339, 2928, 3034
TaqII GACCGA 1 cut(s) 3006
TatI WGTACW 2 cut(s) 28, 46
TscAI CASTG 5 cut(s) 1030, 1273, 2451, 2508, 2800
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 7 cut(s) 72, 75, 240, 1085, 2020, 2416, 2696
Tsp45I GTSAC 1 cut(s) 232
TspDTI ATGAA 9 cut(s) 1358, 1422, 1982, 2061, 2377, 2465, 2504, 2531, 2868
TspGWI ACGGA 2 cut(s) 274, 2724
TspRI CASTG 5 cut(s) 1030, 1273, 2451, 2508, 2800
Van91I CCANNNNNTGG 3 cut(s) 389, 533, 2429
VneI GTGCAC 1 cut(s) 2499
VpaK11BI GGWCC 2 cut(s) 300, 443
XagI CCTNNNNNAGG 1 cut(s) 315
XapI RAATTY 8 cut(s) 375, 795, 961, 1767, 1775, 1919, 2152, 2452
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 7 cut(s) 508, 811, 1249, 2245, 2337, 2597, 2806
XmiI GTMKAC 3 cut(s) 2184, 2745, 2811
ZrmI AGTACT 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.