FvH4_5g04880

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
2914707 .. 2918079
3373 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04880.t1

Sequence Viewer

Length: 3084 bp
ATGTTGTTGATTTTGGATATGAAAATCACCTCATCTTACTTACTTTCCAATGCACCAGCACTAGCACTAGTACTGGCATTTGCTTTTGTTTGTTGCTGCAACTCCATGACCTTAAACATGGACAGCAATAGGCTAGAGCTTGGAAGAGGAAACGAGACGGATCGGCTGGCATTGATTGCCATTAAAGCTCAAATACACCAAGATCCTAATCAGCCGGTCATGAGCTCCTGGAATGAGTCCACTCATTTTTGCATATGGTATGGTGTCACCTGCAGCCGACGCCATCTTCAGAGGGTCACTAAGCTGAACCTAACTTCCCTGAAGTTATCCGGATCAATATCTCCTCACATAGGAAACCTGAGCTTCCTGAGGGAGTTACTCCTCTATGATAATAGCCTCACCAACAAAATTCCTCCAGAAATTGGGTACTTACGGAGGTTGCTGATATTAAATCTAGTAAACAACTCACTCAGTGGTCCTATTCCTGCCAATATCTCCAATTGTTTCAACCTCAGATTCCTCTCTGTTTCGAACAACATGCTGGTAGGTAACATTCCTCCACAACTTGATTCCTTGTCTAAGCTTGAGTATCTTGTTTTGCAAATTAATAATTTAACAGGAGAGATACCTCCTTCCTTGGGTAATCTTTCCAGTCTTGACACACTTCGTGCTCGTCAGAATAACTTGGTGGGCAGTATTCCTAGTTCTTTAGGCCAACTGAAAAAATTATCATATTTTTTGGTAGAGTCAAATAGGTTGTCTGGTACCGTCCCTCCCTCCATCTATAACATCTCTAGTCTCCTTTCTTTTGCCATAGCAGACAACCAGATTCAAGGGGGCATGCCCCCATCCTTATTCAGAACCCTCCCGAATCTCCAATTTTTTAGCATTGTCCTTAATCAGTTTACTGGATCACTTCCTCTCTCAATAAGCAATGCTACTAATCTAGTGGTATTTCAAGTTAATAATAACGAACTGAAAGGGCAAGTGCCGAATTTACAAAAGCTTTGCAACCTTGGGTTTTTCAACATTCTACATAATCATCTTGGAAGCGGTAGTGATGGGGACTTAAGTTTTTTATCAGACTTGACCAATGCCACGAAGTTGCAGTGGTTGCTAATAGGATTCAACAACTTCGGAGGGACGTTGCCGGCATCAATATCTAATCTCTCAACCCTTTCAATTCTACATGTTTGGAACAACCGTTTACACGGAAGCTTCCCTGCAGGGATAGGGAATCTAGTCAACATGAAAGAATTGAAATTGGGTGATAACATGTTCACAGGTAATATTCCCACTGACATCGGGAAGCTTTCAGGTATTCGGATATTGGAATTTGGAAACAACAGATTATCCGGGAGCCTCCCATCCTCTCTAGGAAATCTGACATCATTACTTCGTCTCGAATTGCAAGGAAATTACTTTAATGGCACCATCCCTAGAAGCCTCGGGGAATGCCGTTCATTGCTGTTGTTGAATCTTTCTTGTAATAACCTTAGTGGCGCCATCCCTCCACAAGTTATTGGCCTTTCCTCCTTATCAATATATTTGGATTTGTCTGAGAATCGTCTCAGTGGTTCCCTTCCCTTGGAGGTAGGAAAGTTAAAAACTCTAGGCATATTAAATGTCTCTAATAATATGTTATCAGGAAAACTTCCTGGTAGCTTTGGTAGCTGTGAGAGTTTGGAAGTCCTTCTCTTGCAAGGGAACTTCTTTGATGGCCCCATTCCTTCAGCTTTGGGCTCCTTGAAAGGGATTCGAGAATTAGACATTTCCCACAACAATCTCTCCGGTGAGATTCCTGAGTTTCTAGCGAGGCTTAGAGGTTTGAAGCAACTTAACCTGTCTTTCAACAAATTTTGGGGTGCAGTGCCAGTTAAAGGTGTCTTTAACAATGCAAGTGTCATTTCAGTTGTCGGAAACACAAGACTTTGCGGTGGTATTTCTGATCTCCACCTTCCAAAGTGCAAGTTTAAGGAATCGAGGTCTCCTAGCAAGAAACTAACAATCTCATTAGTCTCTACATTCACTGTTCTTGGAGTAGCTATGCTGTTGACGTTTCTTTTTCTTTGTTTCTTGAAAAAGAGAAGCAAAGAAACTCCATCAAGCTCATTAGCGAACTTTGCTTTACAAGTGTCGTATAGTGCTCTCTTGAAAGCTACTGACGGCTTCTCTGCAGCAAATTTGATTGGTGCTGGTAGTTTTGGGTCTGTATACAAAGGAATTCTCGACGAAGATGGAGCTCAGCTTGTTGCTGTGAAGGTGTTTAACATGTTACGCCGGGGTGTTTCAAAGAGTTTCCTAGCCGAATGCGAGGCACTCAGATATATCAGACACCGAAATCTAGTCCCGATTATAACTGCATGTTCCTGTGTGGACTATCATGGTAATGATTTCAAGGCTTTGGTTTATAAGCTCATGGAGAATGGGAGCTTAGAGGAGTGGCTGCATCCAACTACTGAGACAAAAGACACACCAAAGAGTTTAAGTCTTGTTCAAAGGCTAGACATTGCCATTGACGTTGCATGTGCAGTGGATTATCTTCATAATCATTGTGAAACACCAATAGTTCATTGCGATCTCAAGCCGAGCAATGTTCTTTTGGACCACGACTTGACGGGACATGTTGCTGATTTTGGATTAGCTAGAATCCTCTCAAGACTAGCTGATAACGTTTCAGCAAATCAATCAAGTTCCATTGGAATAAGAGGGACTGTCGGTTATGCTGCTCCAGAGTATGGAATGGGAAGTGAGGTGTCGACATATGGAGATGTCTACAGCTTTGGCATTCTCATGTTAGAGATGTTTACGGGGAAGAGACCCACTGAGCACATGTTCATGGACGATTTGAACCTTCATAAGTGTGTGAAGATGGCCTTGGGCAAACGAGCTTCAGAGATTGCAGATTCGTCAGTTGTTCAAGAAGGCAATCCAAGGCAGAGCACCAACGATGCTCTTGAAGAATGTTTGAGTTCAGTATTAGGTATTGGAGTTGCATGCTCTGTGGAATCCCCAACAGACCGAAAGAATATTGGTGATGTTGTGTCTAAACTGAAAAAGATTCGAGCAACTCTTGTTGGATAG

Protein Analysis

1028

Amino Acids

111.51

Weight (kDa)

8.62

Isoelectric Point (pI)

36.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 52 - 92 1.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 98 - 198 2.5e-06 Leucine-rich repeat region
LRR_14 PF23598 188 - 268 6.6e-08 Leucine-rich repeat region
LRR_14 PF23598 411 - 496 1.2e-06 Leucine-rich repeat region
LRR_14 PF23598 482 - 619 5.1e-10 Leucine-rich repeat region
Pkinase PF00069 727 - 958 1.3e-34 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 728 - 964 4.1e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2357, 2412
AarI CACCTGC 1 cut(s) 278
Acc36I ACCTGC 1 cut(s) 278
Acc65I GGTACC 1 cut(s) 764
AccB1I GGYRCC 3 cut(s) 764, 1430, 1502
AccB7I CCANNNNNTGG 2 cut(s) 422, 2738
AccI GTMKAC 3 cut(s) 2214, 2759, 2775
AccIII TCCGGA 1 cut(s) 329
AciI CCGC 2 cut(s) 1053, 1935
AclI AACGTT 1 cut(s) 2673
AclWI GGATC 4 cut(s) 168, 197, 340, 919
AcsI RAATTY 6 cut(s) 408, 994, 1334, 1856, 2182, 2223
AcuI CTGAAG 4 cut(s) 272, 341, 1716, 2877
AcyI GRCGYC 2 cut(s) 280, 1503
AdeI CACNNNGTG 2 cut(s) 473, 668
AfaI GTAC 3 cut(s) 72, 428, 766
AfiI CCNNNNNNNGG 7 cut(s) 350, 422, 638, 1588, 1752, 1880, 2738
AflII CTTAAG 1 cut(s) 1069
AflIII ACRYGT 5 cut(s) 1189, 1275, 2271, 2623, 2832
AhlI ACTAGT 1 cut(s) 67
AjnI CCWGG 2 cut(s) 227, 1657
AjuI GAANNNNNNNTTGG 2 cut(s) 2861, 2893
AloI GAACNNNNNNTCC 2 cut(s) 299, 331
Alw21I GWGCWC 6 cut(s) 227, 673, 2149, 2245, 2832, 2945
Alw26I GTCTC 9 cut(s) 149, 803, 1406, 1574, 1633, 1992, 2023, 2456, 2812
AlwI GGATC 4 cut(s) 168, 197, 340, 919
Ama87I CYCGRG 1 cut(s) 1448
Aor13HI TCCGGA 1 cut(s) 329
AoxI GGCC 4 cut(s) 712, 1525, 1720, 2874
ApeKI GCWGC 5 cut(s) 96, 273, 2177, 2446, 2726
ApoI RAATTY 6 cut(s) 408, 994, 1334, 1856, 2182, 2223
ArsI GACNNNNNNTTYG 2 cut(s) 743, 775
AseI ATTAAT 1 cut(s) 606
Asp700I GAANNNNTTC 1 cut(s) 1692
Asp718I GGTACC 1 cut(s) 764
AspLEI GCGC 1 cut(s) 1505
AspS9I GGNCC 3 cut(s) 476, 1721, 2605
AsuC2I CCSGG 2 cut(s) 1357, 2282
AsuHPI GGTGA 6 cut(s) 19, 259, 391, 1280, 1805, 3047
AsuII TTCGAA 1 cut(s) 530
AvaI CYCGRG 1 cut(s) 1448
AvaII GGWCC 2 cut(s) 476, 2605
AxyI CCTNAGG 1 cut(s) 368
BanI GGYRCC 3 cut(s) 764, 1430, 1502
BanII GRGCYC 3 cut(s) 227, 1745, 2245
Bbv12I GWGCWC 6 cut(s) 227, 673, 2149, 2245, 2832, 2945
BbvI GCAGC 5 cut(s) 83, 285, 2189, 2433, 2713
BceAI ACGGC 2 cut(s) 1443, 2182
BcgI CGANNNNNNTGC 2 cut(s) 520, 554
BciT130I CCWGG 2 cut(s) 229, 1659
BcnI CCSGG 2 cut(s) 1357, 2282
BcoDI GTCTC 9 cut(s) 149, 803, 1406, 1574, 1633, 1992, 2023, 2456, 2812
BcuI ACTAGT 1 cut(s) 67
BfmI CTRYAG 4 cut(s) 271, 1224, 2175, 2776
BfoI RGCGCY 1 cut(s) 1506
BfrI CTTAAG 1 cut(s) 1069
BfuAI ACCTGC 1 cut(s) 278
BisI GCNGC 5 cut(s) 97, 274, 2178, 2447, 2727
BlpI GCTNAGC 1 cut(s) 2244
BlsI GCNGC 5 cut(s) 98, 275, 2179, 2448, 2728
BmcAI AGTACT 1 cut(s) 72
Bme1390I CCNGG 4 cut(s) 229, 1357, 1659, 2282
Bme18I GGWCC 2 cut(s) 476, 2605
BmeT110I CYCGRG 1 cut(s) 1448
BmgT120I GGNCC 3 cut(s) 476, 1721, 2605
BmiI GGNNCC 7 cut(s) 766, 1361, 1432, 1504, 1579, 1723, 1744
BmrFI CCNGG 4 cut(s) 229, 1357, 1659, 2282
BmsI GCATC 3 cut(s) 1163, 2458, 2941
BpmI CTGGAG 2 cut(s) 399, 2715
Bpu10I CCTNAGC 1 cut(s) 359
Bpu1102I GCTNAGC 1 cut(s) 2244
Bpu14I TTCGAA 1 cut(s) 530
BpuEI CTTGAG 3 cut(s) 605, 2567, 2641
BpuMI CCSGG 2 cut(s) 1357, 2282
BsaBI GATNNNNATC 2 cut(s) 207, 337
BsaHI GRCGYC 2 cut(s) 280, 1503
BsaI GGTCTC 2 cut(s) 1992, 2812
BsaJI CCNNGG 7 cut(s) 636, 1015, 1447, 1587, 2281, 2877, 2933
BsaWI WCCGGW 2 cut(s) 329, 1790
BsaXI ACNNNNNCTCC 4 cut(s) 757, 787, 1772, 1802
Bsc4I CCNNNNNNNGG 7 cut(s) 350, 422, 638, 1588, 1752, 1880, 2738
Bse118I RCCGGY 2 cut(s) 214, 1150
Bse1I ACTGG 4 cut(s) 78, 651, 913, 1874
Bse21I CCTNAGG 1 cut(s) 368
Bse3DI GCAATG 5 cut(s) 940, 1463, 2508, 2572, 2599
Bse8I GATNNNNATC 2 cut(s) 207, 337
BseAI TCCGGA 1 cut(s) 329
BseBI CCWGG 2 cut(s) 229, 1659
BseDI CCNNGG 7 cut(s) 636, 1015, 1447, 1587, 2281, 2877, 2933
BseGI GGATG 5 cut(s) 848, 1367, 1434, 1506, 2449
BseJI GATNNNNATC 2 cut(s) 207, 337
BseLI CCNNNNNNNGG 7 cut(s) 350, 422, 638, 1588, 1752, 1880, 2738
BseMI GCAATG 5 cut(s) 940, 1463, 2508, 2572, 2599
BseNI ACTGG 4 cut(s) 78, 651, 913, 1874
BseRI GAGGAG 3 cut(s) 333, 371, 2453
BseXI GCAGC 5 cut(s) 83, 285, 2189, 2433, 2713
BsgI GTGCAG 2 cut(s) 1887, 2550
BshFI GGCC 4 cut(s) 714, 1527, 1722, 2876
BshNI GGYRCC 3 cut(s) 764, 1430, 1502
BsiHKAI GWGCWC 6 cut(s) 227, 673, 2149, 2245, 2832, 2945
BsiHKCI CYCGRG 1 cut(s) 1448
BsiSI CCGG 6 cut(s) 215, 330, 1151, 1356, 1791, 2281
BslFI GGGAC 6 cut(s) 755, 1079, 1156, 2333, 2634, 2725
BslI CCNNNNNNNGG 7 cut(s) 350, 422, 638, 1588, 1752, 1880, 2738
BsmAI GTCTC 9 cut(s) 149, 803, 1406, 1574, 1633, 1992, 2023, 2456, 2812
BsmBI CGTCTC 3 cut(s) 149, 1406, 1574
BsmFI GGGAC 6 cut(s) 755, 1079, 1156, 2333, 2634, 2725
BsmI GAATGC 3 cut(s) 1460, 2315, 2787
BsnI GGCC 4 cut(s) 714, 1527, 1722, 2876
Bso31I GGTCTC 2 cut(s) 1992, 2812
BsoBI CYCGRG 1 cut(s) 1448
Bsp119I TTCGAA 1 cut(s) 530
Bsp1286I GDGCHC 7 cut(s) 227, 673, 1745, 2149, 2245, 2832, 2945
Bsp13I TCCGGA 1 cut(s) 329
Bsp143I GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
Bsp1720I GCTNAGC 1 cut(s) 2244
BspACI CCGC 2 cut(s) 1053, 1935
BspANI GGCC 4 cut(s) 714, 1527, 1722, 2876
BspEI TCCGGA 1 cut(s) 329
BspHI TCATGA 1 cut(s) 219
BspLI GGNNCC 7 cut(s) 766, 1361, 1432, 1504, 1579, 1723, 1744
BspMAI CTGCAG 3 cut(s) 275, 1228, 2179
BspMI ACCTGC 1 cut(s) 278
BspPI GGATC 4 cut(s) 168, 197, 340, 919
BspT104I TTCGAA 1 cut(s) 530
BspT107I GGYRCC 3 cut(s) 764, 1430, 1502
BspTI CTTAAG 1 cut(s) 1069
BspTNI GGTCTC 2 cut(s) 1992, 2812
BsrDI GCAATG 5 cut(s) 940, 1463, 2508, 2572, 2599
BsrFI RCCGGY 2 cut(s) 214, 1150
BsrI ACTGG 4 cut(s) 78, 651, 913, 1874
BssAI RCCGGY 2 cut(s) 214, 1150
BssECI CCNNGG 7 cut(s) 636, 1015, 1447, 1587, 2281, 2877, 2933
BssMI GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
BssNAI GTATAC 1 cut(s) 2215
BssNI GRCGYC 2 cut(s) 280, 1503
BssT1I CCWWGG 5 cut(s) 636, 1015, 1587, 2877, 2933
Bst1107I GTATAC 1 cut(s) 2215
Bst2UI CCWGG 2 cut(s) 229, 1659
Bst4CI ACNGT 4 cut(s) 769, 1205, 2032, 2716
Bst6I CTCTTC 2 cut(s) 139, 2810
BstACI GRCGYC 2 cut(s) 280, 1503
BstAFI CTTAAG 1 cut(s) 1069
BstAPI GCANNNNNTGC 2 cut(s) 176, 1114
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 4 cut(s) 168, 842, 1152, 2998
BstENI CCTNNNNNAGG 1 cut(s) 348
BstF5I GGATG 5 cut(s) 848, 1367, 1434, 1506, 2449
BstH2I RGCGCY 1 cut(s) 1506
BstHHI GCGC 1 cut(s) 1505
BstKTI GATC 6 cut(s) 163, 205, 335, 914, 1951, 2581
BstMAI GTCTC 9 cut(s) 149, 803, 1406, 1574, 1633, 1992, 2023, 2456, 2812
BstMBI GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
BstMWI GCNNNNNNNGC 6 cut(s) 176, 185, 279, 1114, 1671, 2123
BstNI CCWGG 2 cut(s) 229, 1659
BstSCI CCNGG 4 cut(s) 227, 1355, 1657, 2280
BstSFI CTRYAG 4 cut(s) 271, 1224, 2175, 2776
BstV1I GCAGC 5 cut(s) 83, 285, 2189, 2433, 2713
BstX2I RGATCY 1 cut(s) 202
BstYI RGATCY 1 cut(s) 202
BstZ17I GTATAC 1 cut(s) 2215
Bsu36I CCTNAGG 1 cut(s) 368
BsuRI GGCC 4 cut(s) 714, 1527, 1722, 2876
BtsCI GGATG 5 cut(s) 848, 1367, 1434, 1506, 2449
BtsI GCAGTG 3 cut(s) 1115, 1875, 2538
BtsIMutI CAGTG 8 cut(s) 478, 1115, 1296, 1579, 1875, 2028, 2538, 2823
BveI ACCTGC 1 cut(s) 278
Cac8I GCNNGC 4 cut(s) 168, 842, 1152, 2998
CciI TCATGA 1 cut(s) 219
CfoI GCGC 1 cut(s) 1505
Cfr10I RCCGGY 2 cut(s) 214, 1150
Cfr13I GGNCC 3 cut(s) 476, 1721, 2605
CseI GACGC 1 cut(s) 288
Csp6I GTAC 3 cut(s) 71, 427, 765
CviQI GTAC 3 cut(s) 71, 427, 765
DinI GGCGCC 1 cut(s) 1504
DpnI GATC 6 cut(s) 162, 204, 334, 913, 1950, 2580
DpnII GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
DraIII CACNNNGTG 2 cut(s) 473, 668
Eam1104I CTCTTC 2 cut(s) 139, 2810
EarI CTCTTC 2 cut(s) 139, 2810
Ecl136II GAGCTC 2 cut(s) 225, 2243
Eco130I CCWWGG 5 cut(s) 636, 1015, 1587, 2877, 2933
Eco24I GRGCYC 3 cut(s) 227, 1745, 2245
Eco31I GGTCTC 2 cut(s) 1992, 2812
Eco47I GGWCC 2 cut(s) 476, 2605
Eco53kI GAGCTC 2 cut(s) 225, 2243
Eco57I CTGAAG 4 cut(s) 272, 341, 1716, 2877
Eco81I CCTNAGG 1 cut(s) 368
Eco88I CYCGRG 1 cut(s) 1448
EcoICRI GAGCTC 2 cut(s) 225, 2243
EcoNI CCTNNNNNAGG 1 cut(s) 348
EcoRI GAATTC 1 cut(s) 2223
EcoRII CCWGG 2 cut(s) 227, 1657
EcoT14I CCWWGG 5 cut(s) 636, 1015, 1587, 2877, 2933
EcoT38I GRGCYC 3 cut(s) 227, 1745, 2245
EgeI GGCGCC 1 cut(s) 1504
EheI GGCGCC 1 cut(s) 1504
ErhI CCWWGG 5 cut(s) 636, 1015, 1587, 2877, 2933
Esp3I CGTCTC 3 cut(s) 149, 1406, 1574
FalI AAGNNNNNCTT 2 cut(s) 2861, 2893
FaqI GGGAC 6 cut(s) 755, 1079, 1156, 2333, 2634, 2725
FauNDI CATATG 2 cut(s) 254, 2764
FblI GTMKAC 3 cut(s) 2214, 2759, 2775
Fnu4HI GCNGC 5 cut(s) 97, 274, 2178, 2447, 2727
FokI GGATG 5 cut(s) 835, 1354, 1421, 1493, 2436
FriOI GRGCYC 3 cut(s) 227, 1745, 2245
Fsp4HI GCNGC 5 cut(s) 97, 274, 2178, 2447, 2727
GlaI GCGC 1 cut(s) 1504
GluI GCNGC 5 cut(s) 97, 274, 2178, 2447, 2727
GsuI CTGGAG 2 cut(s) 399, 2715
HaeII RGCGCY 1 cut(s) 1506
HaeIII GGCC 4 cut(s) 714, 1527, 1722, 2876
HapII CCGG 6 cut(s) 215, 330, 1151, 1356, 1791, 2281
HgaI GACGC 1 cut(s) 288
HhaI GCGC 1 cut(s) 1505
Hin1I GRCGYC 2 cut(s) 280, 1503
Hin6I GCGC 1 cut(s) 1503
HinP1I GCGC 1 cut(s) 1503
HincII GTYRAC 3 cut(s) 1246, 2055, 2760
HindII GTYRAC 3 cut(s) 1246, 2055, 2760
HindIII AAGCTT 4 cut(s) 581, 1004, 1216, 1310
HpaII CCGG 6 cut(s) 215, 330, 1151, 1356, 1791, 2281
HphI GGTGA 6 cut(s) 19, 259, 391, 1280, 1805, 3047
Hpy99I CGWCG 2 cut(s) 282, 2234
HpyAV CCTTC 8 cut(s) 642, 1592, 1703, 1740, 1967, 2254, 2864, 2918
HpyCH4III ACNGT 4 cut(s) 769, 1205, 2032, 2716
HpyCH4IV ACGT 4 cut(s) 1145, 2057, 2520, 2673
HpyF10VI GCNNNNNNNGC 6 cut(s) 176, 185, 279, 1114, 1671, 2123
HpySE526I ACGT 4 cut(s) 1145, 2057, 2520, 2673
Hsp92I GRCGYC 2 cut(s) 280, 1503
HspAI GCGC 1 cut(s) 1503
KasI GGCGCC 1 cut(s) 1502
Kpn2I TCCGGA 1 cut(s) 329
KpnI GGTACC 1 cut(s) 768
KroI GCCGGC 1 cut(s) 1150
KroNI GCCGGC 1 cut(s) 1152
Kzo9I GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
LmnI GCTCC 6 cut(s) 230, 1359, 1748, 2240, 2430, 2734
Lsp1109I GCAGC 5 cut(s) 83, 285, 2189, 2433, 2713
LweI GCATC 3 cut(s) 1163, 2458, 2941
MaeII ACGT 4 cut(s) 1145, 2057, 2520, 2673
MaeIII GTNAC 5 cut(s) 265, 295, 375, 548, 2274
MalI GATC 6 cut(s) 162, 204, 334, 913, 1950, 2580
MboI GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
MboII GAAGA 7 cut(s) 156, 278, 2246, 2534, 2827, 2881, 2972
MfeI CAATTG 1 cut(s) 499
MflI RGATCY 1 cut(s) 202
MhlI GDGCHC 7 cut(s) 227, 673, 1745, 2149, 2245, 2832, 2945
Mly113I GGCGCC 1 cut(s) 1503
MlyI GAGTC 2 cut(s) 245, 755
MmeI TCCRAC 3 cut(s) 1897, 2477, 3058
MroI TCCGGA 1 cut(s) 329
MroNI GCCGGC 1 cut(s) 1150
MroXI GAANNNNTTC 1 cut(s) 1692
MslI CAYNNNNRTG 4 cut(s) 2388, 2792, 2837, 2862
MspCI CTTAAG 1 cut(s) 1069
MspI CCGG 6 cut(s) 215, 330, 1151, 1356, 1791, 2281
MspR9I CCNGG 4 cut(s) 229, 1357, 1659, 2282
MunI CAATTG 1 cut(s) 499
Mva1269I GAATGC 3 cut(s) 1460, 2315, 2787
MvaI CCWGG 2 cut(s) 229, 1659
MwoI GCNNNNNNNGC 6 cut(s) 176, 185, 279, 1114, 1671, 2123
NaeI GCCGGC 1 cut(s) 1152
NarI GGCGCC 1 cut(s) 1503
NciI CCSGG 2 cut(s) 1357, 2282
NdeI CATATG 2 cut(s) 254, 2764
NdeII GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
NgoMIV GCCGGC 1 cut(s) 1150
NlaIV GGNNCC 7 cut(s) 766, 1361, 1432, 1504, 1579, 1723, 1744
NmeAIII GCCGAG 1 cut(s) 2613
NmuCI GTSAC 2 cut(s) 265, 295
NspV TTCGAA 1 cut(s) 530
PaeI GCATGC 2 cut(s) 844, 3000
PagI TCATGA 1 cut(s) 219
PaqCI CACCTGC 1 cut(s) 278
PciI ACATGT 5 cut(s) 1189, 1275, 2271, 2623, 2832
PctI GAATGC 3 cut(s) 1460, 2315, 2787
PdiI GCCGGC 1 cut(s) 1152
PdmI GAANNNNTTC 1 cut(s) 1692
PflMI CCANNNNNTGG 2 cut(s) 422, 2738
PfoI TCCNGGA 2 cut(s) 227, 1355
PkrI GCNGC 5 cut(s) 98, 275, 2179, 2448, 2728
PleI GAGTC 2 cut(s) 244, 754
PluTI GGCGCC 1 cut(s) 1506
PpsI GAGTC 2 cut(s) 244, 754
PscI ACATGT 5 cut(s) 1189, 1275, 2271, 2623, 2832
PshBI ATTAAT 1 cut(s) 606
PsiI TTATAA 2 cut(s) 2357, 2412
Psp124BI GAGCTC 2 cut(s) 227, 2245
Psp1406I AACGTT 1 cut(s) 2673
Psp6I CCWGG 2 cut(s) 227, 1657
PspGI CCWGG 2 cut(s) 227, 1657
PspN4I GGNNCC 7 cut(s) 766, 1361, 1432, 1504, 1579, 1723, 1744
PspPI GGNCC 3 cut(s) 476, 1721, 2605
PsrI GAACNNNNNNTAC 2 cut(s) 688, 720
PstI CTGCAG 3 cut(s) 275, 1228, 2179
PsuI RGATCY 1 cut(s) 202
RsaI GTAC 3 cut(s) 72, 428, 766
RsaNI GTAC 3 cut(s) 71, 427, 765
RseI CAYNNNNRTG 4 cut(s) 2388, 2792, 2837, 2862
SacI GAGCTC 2 cut(s) 227, 2245
SalI GTCGAC 1 cut(s) 2758
SatI GCNGC 5 cut(s) 97, 274, 2178, 2447, 2727
Sau3AI GATC 6 cut(s) 160, 202, 332, 911, 1948, 2578
Sau96I GGNCC 3 cut(s) 476, 1721, 2605
SbfI CCTGCAGG 1 cut(s) 1228
ScaI AGTACT 1 cut(s) 72
SchI GAGTC 2 cut(s) 245, 755
ScrFI CCNGG 4 cut(s) 229, 1357, 1659, 2282
SdaI CCTGCAGG 1 cut(s) 1228
SduI GDGCHC 7 cut(s) 227, 673, 1745, 2149, 2245, 2832, 2945
SfaNI GCATC 3 cut(s) 1163, 2458, 2941
SfcI CTRYAG 4 cut(s) 271, 1224, 2175, 2776
SfoI GGCGCC 1 cut(s) 1504
SfuI TTCGAA 1 cut(s) 530
SinI GGWCC 2 cut(s) 476, 2605
SmiMI CAYNNNNRTG 4 cut(s) 2388, 2792, 2837, 2862
SmlI CTYRAG 4 cut(s) 584, 1069, 2582, 2656
SmoI CTYRAG 4 cut(s) 584, 1069, 2582, 2656
SpeI ACTAGT 1 cut(s) 67
SphI GCATGC 2 cut(s) 844, 3000
Sse8387I CCTGCAGG 1 cut(s) 1228
SsiI CCGC 2 cut(s) 1053, 1935
SspDI GGCGCC 1 cut(s) 1502
SspI AATATT 2 cut(s) 1291, 3031
SstI GAGCTC 2 cut(s) 227, 2245
StyD4I CCNGG 4 cut(s) 227, 1355, 1657, 2280
StyI CCWWGG 5 cut(s) 636, 1015, 1587, 2877, 2933
TaaI ACNGT 4 cut(s) 769, 1205, 2032, 2716
TaiI ACGT 4 cut(s) 1148, 2060, 2523, 2676
TaqI TCGA 7 cut(s) 530, 1404, 1759, 1982, 2229, 2759, 3064
TaqII GACCGA 1 cut(s) 3036
TatI WGTACW 1 cut(s) 70
TscAI CASTG 8 cut(s) 478, 1115, 1303, 1579, 1875, 2035, 2538, 2830
TseFI GTSAC 2 cut(s) 265, 295
TseI GCWGC 5 cut(s) 96, 273, 2177, 2446, 2726
Tsp45I GTSAC 2 cut(s) 265, 295
TspDTI ATGAA 7 cut(s) 35, 1265, 1452, 2534, 2561, 2827, 2846
TspGWI ACGGA 3 cut(s) 173, 448, 1227
TspRI CASTG 8 cut(s) 478, 1115, 1303, 1579, 1875, 2035, 2538, 2830
Van91I CCANNNNNTGG 2 cut(s) 422, 2738
Vha464I CTTAAG 1 cut(s) 1069
VpaK11BI GGWCC 2 cut(s) 476, 2605
VspI ATTAAT 1 cut(s) 606
XagI CCTNNNNNAGG 1 cut(s) 348
XapI RAATTY 6 cut(s) 408, 994, 1334, 1856, 2182, 2223
XmiI GTMKAC 3 cut(s) 2214, 2759, 2775
XmnI GAANNNNTTC 1 cut(s) 1692
ZrmI AGTACT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.