RLG00000028140
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
19271442 .. 19273874
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028140

Sequence Viewer

Length: 2103 bp
ATGCTATCTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGGTATAGTTATTTTCTCCGTAGGAGGAAACCAACTTCAAGGAAGTCTTCCATCAAACTTGAGCGATGCTTTTCCCAACCTTCAAATCTTTACCGTTGCCGAAAATCAATTTACTGGGGCCATCCCCTCCTCAATATCCAAGGCAACAAATCTTGTGGTGTTTCAATGTCCGTCAAACAAACTCTCTGGACAGGTACGAAATTTACAAAATATGCATAACATTGGGTGGTTCATTGTCTCTGATAATAATCTTGGTAGCGGTAAAGATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAGCTAACTGAATTGGAGTTCGAGGACAACAATTTTGGAGGCACGTTGCCCGCATCAATATCCAATCTCTCAATCAGTCTCGAAGATCTTTCGCTTTCAGGAAACCAACTACATGGAAGCATCCCAACTGGATTAGGGAATCTTGTCAACCTGCAATCACTCGTAATAGGAGAAAACTCCTTCACAGGTAGCATCCCCACAGACATTGGGAGGCTTTCAAGTCTTGGAGCATTGTATCTTGGCAACAACCAATTATCAGGGAGCATTCCATCTTCTCTTGGAAATTTAACATTGGAGATTGGAAATTTGAAGAATCTACGGGAACTATACGTTTCTAATAACTTGTTATCAGAAGAACTTCCCAGTAGCCTTGGCAGTTGCCAGAGCTTAGAAATCCTGAGCTTGCAAGGTAACTTCTTCTTGGGGGCCATTCCTTCATCTATGAAGGATTTGAGAGGGATTCAATATTTAGACCTTTCTCAAAACAATTTGTCAGGAGATATTCCACAATTTCTTGAGAATCTGAACTTGGAGTACCTGAACCTATCCTTCAACCAGTTTTGGGGAGCAGTACCAACTGGCGGTGTTTTTAAGAATGCAAGTGCGACTTCAGTTGCTGGAAATGCTAGACTCTGCGGAGGTATGGCTATTCTTCGACTTCCTCTGTGCAAGCTTAATGAGTCTAAAGCAGAAGGGTTGTCTCATAGAATGAAACTAATGATCTCTTTAGTCTCCGGGTTCACTCTCTTGGGAGTGGTTGTGGTGCTATCTCTTTTTCTTCTTGGTAAGAAAAGGAAAGAAACGAATTTAAGCATTTTGGGGAACTCTGTTTTGCAAGTTTCATATGCTACACTCCTCAGAGCTACTGATGGTTTTTCTTCAGCTAATTTGATCGGTGTGGGTGCTTTTGGGTCTGTGTACAAAGGAATCCTTGCTAATGATAGAGTTGTTGTCGCTGTGAAGGTGCTTCACATGTTACACAGGGGAGCAGCTAAGAGTTTCATGGCTGAATGTGAGGCATTGAGAAATATCAGACATCGAAATTTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTTGGCGGCAATGATTTCAAGGCCCTTGTTTATGAGTTCATGGACAACGGGAGCTTGGAAGAGTGGTTGCATCCATCTATTGGAACTGGAGAGGTAACAGAAGCACCCAAAATTTTAAGTCTTATTCAGAGGCTCAACATTGCCATTGATGTTGCTAGTGCATTGGATTATCTTCAAAACCATTGTGAGACACCGATCGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTCTGGATGGTGACATGACTGGACATGTTTCTGACTTTGGGCTGTCAAAGTTTCTCTCAGAACCAACCACTAATGTTTCTGGAAATCAATCAAGCTCCATTGGAATTAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGAATGGGAAGTGGGAAAATTCTACAGTACTGGGGGGTATCCCATACCGGACGTTTTGTGAATATTTGTGACCGTTGGATCGGTAATATATCCAAGGGTCATGGATATTCGAAACAAGCTGACCTATTGAGAAGGTATCCCGTTTCGCCGTCACTCTCAGTTCGCCACCGTGCCTCCAGCGTCGGGCCTCCCTGGGCGGCGCTCCTCCGCTTCGCTGTGCTACCACGACTCTCTCTCTCTCTCTGCGCTACTCTGCCTCAGTCTCCCTCTGTTCCACCGCGCCCCTCCACTCCACTGTGTTGGTGA

Protein Analysis

701

Amino Acids

74.93

Weight (kDa)

6.68

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 245 - 303 1.6e-07 Leucine rich repeat
Pkinase PF00069 410 - 599 2e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 412 - 580 3.4e-27 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 507
AccB7I CCANNNNNTGG 2 cut(s) 1508, 1796
AccII CGCG 1 cut(s) 2077
AciI CCGC 8 cut(s) 300, 399, 930, 984, 1434, 1994, 2005, 2075
AclWI GGATC 2 cut(s) 1777, 1883
AcsI RAATTY 7 cut(s) 241, 631, 652, 1153, 1390, 1539, 1815
AcuI CTGAAG 2 cut(s) 942, 1212
AfaI GTAC 5 cut(s) 237, 884, 921, 1268, 1826
AfiI CCNNNNNNNGG 5 cut(s) 910, 929, 1508, 1796, 1980
AflIII ACRYGT 2 cut(s) 1320, 1681
AjnI CCWGG 1 cut(s) 1988
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
Alw26I GTCTC 7 cut(s) 283, 331, 431, 1053, 1084, 1610, 2064
AlwI GGATC 2 cut(s) 1777, 1883
AlwNI CAGNNNCTG 1 cut(s) 965
AoxI GGCC 4 cut(s) 159, 774, 1449, 1982
ApeKI GCWGC 2 cut(s) 1337, 1784
ApoI RAATTY 7 cut(s) 241, 631, 652, 1153, 1390, 1539, 1815
ArsI GACNNNNNNTTYG 4 cut(s) 305, 337, 365, 397
Asp700I GAANNNNTTC 1 cut(s) 705
AspLEI GCGC 3 cut(s) 1999, 2045, 2079
AspS9I GGNCC 4 cut(s) 159, 774, 1450, 1982
AsuC2I CCSGG 1 cut(s) 1084
AsuHPI GGTGA 2 cut(s) 323, 1679
AsuII TTCGAA 1 cut(s) 1907
BarI GAAGNNNNNNTAC 1 cut(s) 36
BbsI GAAGAC 1 cut(s) 80
BbvI GCAGC 2 cut(s) 1349, 1771
BccI CCATC 7 cut(s) 100, 170, 302, 625, 1211, 1510, 1658
BceAI ACGGC 1 cut(s) 1930
BciT130I CCWGG 1 cut(s) 1990
BciVI GTATCC 2 cut(s) 1846, 1944
BclI TGATCA 1 cut(s) 336
BcnI CCSGG 1 cut(s) 1084
BcoDI GTCTC 7 cut(s) 283, 331, 431, 1053, 1084, 1610, 2064
BfaI CTAG 2 cut(s) 975, 1584
BfmI CTRYAG 1 cut(s) 1820
BfoI RGCGCY 1 cut(s) 2000
BfuAI ACCTGC 1 cut(s) 507
BfuI GTATCC 2 cut(s) 1846, 1944
BglII AGATCT 2 cut(s) 433, 1401
BisI GCNGC 4 cut(s) 1338, 1435, 1785, 1995
BlsI GCNGC 4 cut(s) 1339, 1436, 1786, 1996
BmcAI AGTACT 1 cut(s) 1826
Bme1390I CCNGG 2 cut(s) 1084, 1990
BmgT120I GGNCC 4 cut(s) 159, 774, 1450, 1982
BmiI GGNNCC 2 cut(s) 160, 775
BmrFI CCNGG 2 cut(s) 1084, 1990
BmrI ACTGGG 3 cut(s) 165, 705, 1837
BmsI GCATC 5 cut(s) 97, 410, 477, 549, 1507
BmuI ACTGGG 3 cut(s) 165, 705, 1837
BpiI GAAGAC 1 cut(s) 80
BpmI CTGGAG 2 cut(s) 1536, 1957
Bpu10I CCTNAGC 1 cut(s) 746
Bpu14I TTCGAA 1 cut(s) 1907
BpuEI CTTGAG 4 cut(s) 121, 337, 884, 1625
BpuMI CCSGG 1 cut(s) 1084
BsaBI GATNNNNATC 1 cut(s) 288
BsaJI CCNNGG 5 cut(s) 180, 718, 1890, 1988, 1989
BsaWI WCCGGW 1 cut(s) 1844
BsaXI ACNNNNNCTCC 4 cut(s) 1092, 1122, 1955, 1985
Bsc4I CCNNNNNNNGG 5 cut(s) 910, 929, 1508, 1796, 1980
Bse1I ACTGG 8 cut(s) 160, 481, 711, 904, 931, 1519, 1681, 1832
Bse3DI GCAATG 2 cut(s) 1444, 1566
Bse8I GATNNNNATC 1 cut(s) 288
BseBI CCWGG 1 cut(s) 1990
BseDI CCNNGG 5 cut(s) 180, 718, 1890, 1988, 1989
BseGI GGATG 6 cut(s) 15, 162, 468, 540, 1498, 1669
BseJI GATNNNNATC 1 cut(s) 288
BseLI CCNNNNNNNGG 5 cut(s) 910, 929, 1508, 1796, 1980
BseMI GCAATG 2 cut(s) 1444, 1566
BseMII CTCAG 6 cut(s) 342, 737, 1219, 1728, 1968, 2069
BseNI ACTGG 8 cut(s) 160, 481, 711, 904, 931, 1519, 1681, 1832
BseRI GAGGAG 3 cut(s) 160, 1193, 1991
BseXI GCAGC 2 cut(s) 1349, 1771
BsgI GTGCAG 1 cut(s) 1770
Bsh1236I CGCG 1 cut(s) 2077
Bsh1285I CGRYCG 1 cut(s) 1626
BshFI GGCC 4 cut(s) 161, 776, 1451, 1984
BsiEI CGRYCG 1 cut(s) 1626
BsiSI CCGG 2 cut(s) 1083, 1845
BslI CCNNNNNNNGG 5 cut(s) 910, 929, 1508, 1796, 1980
BsmAI GTCTC 7 cut(s) 283, 331, 431, 1053, 1084, 1610, 2064
BsmI GAATGC 2 cut(s) 612, 949
BsnI GGCC 4 cut(s) 161, 776, 1451, 1984
Bsp119I TTCGAA 1 cut(s) 1907
Bsp1407I TGTACA 1 cut(s) 1266
Bsp143I GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
BspACI CCGC 8 cut(s) 300, 399, 930, 984, 1434, 1994, 2005, 2075
BspANI GGCC 4 cut(s) 161, 776, 1451, 1984
BspCNI CTCAG 6 cut(s) 341, 738, 1218, 1727, 1967, 2068
BspFNI CGCG 1 cut(s) 2077
BspLI GGNNCC 2 cut(s) 160, 775
BspMI ACCTGC 1 cut(s) 507
BspPI GGATC 2 cut(s) 1777, 1883
BspT104I TTCGAA 1 cut(s) 1907
BsrDI GCAATG 2 cut(s) 1444, 1566
BsrGI TGTACA 1 cut(s) 1266
BsrI ACTGG 8 cut(s) 160, 481, 711, 904, 931, 1519, 1681, 1832
BssECI CCNNGG 5 cut(s) 180, 718, 1890, 1988, 1989
BssMI GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
BssT1I CCWWGG 3 cut(s) 180, 718, 1890
Bst2UI CCWGG 1 cut(s) 1990
Bst4CI ACNGT 5 cut(s) 136, 1824, 1871, 1967, 2094
Bst6I CTCTTC 1 cut(s) 1482
BstAUI TGTACA 1 cut(s) 1266
BstBI TTCGAA 1 cut(s) 1907
BstC8I GCNNGC 3 cut(s) 399, 752, 1019
BstDEI CTNAG 8 cut(s) 328, 736, 746, 1205, 1341, 1714, 1954, 2055
BstF5I GGATG 6 cut(s) 15, 162, 468, 540, 1498, 1669
BstFNI CGCG 1 cut(s) 2077
BstH2I RGCGCY 1 cut(s) 2000
BstHHI GCGC 3 cut(s) 1999, 2045, 2079
BstKTI GATC 9 cut(s) 339, 436, 1071, 1242, 1404, 1626, 1639, 1772, 1878
BstMAI GTCTC 7 cut(s) 283, 331, 431, 1053, 1084, 1610, 2064
BstMBI GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
BstMCI CGRYCG 1 cut(s) 1626
BstMWI GCNNNNNNNGC 1 cut(s) 971
BstNI CCWGG 1 cut(s) 1990
BstNSI RCATGY 3 cut(s) 1324, 1416, 1685
BstSCI CCNGG 2 cut(s) 1082, 1988
BstSFI CTRYAG 1 cut(s) 1820
BstUI CGCG 1 cut(s) 2077
BstV1I GCAGC 2 cut(s) 1349, 1771
BstV2I GAAGAC 1 cut(s) 80
BstX2I RGATCY 2 cut(s) 433, 1401
BstXI CCANNNNNNTGG 2 cut(s) 461, 2097
BstYI RGATCY 2 cut(s) 433, 1401
BsuI GTATCC 2 cut(s) 1846, 1944
BsuRI GGCC 4 cut(s) 161, 776, 1451, 1984
BtgZI GCGATG 1 cut(s) 120
BtsCI GGATG 6 cut(s) 15, 162, 468, 540, 1498, 1669
BtsIMutI CAGTG 1 cut(s) 2090
BveI ACCTGC 1 cut(s) 507
Cac8I GCNNGC 3 cut(s) 399, 752, 1019
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 3 cut(s) 1999, 2045, 2079
Cfr13I GGNCC 4 cut(s) 159, 774, 1450, 1982
CseI GACGC 1 cut(s) 1966
Csp6I GTAC 5 cut(s) 236, 883, 920, 1267, 1825
CspCI CAANNNNNGTGG 4 cut(s) 177, 212, 535, 570
CviAII CATG 8 cut(s) 461, 1321, 1351, 1413, 1468, 1672, 1682, 1898
CviQI GTAC 5 cut(s) 236, 883, 920, 1267, 1825
DdeI CTNAG 8 cut(s) 328, 736, 746, 1205, 1341, 1714, 1954, 2055
DpnI GATC 9 cut(s) 338, 435, 1070, 1241, 1403, 1625, 1638, 1771, 1877
DpnII GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
Eam1104I CTCTTC 1 cut(s) 1482
EarI CTCTTC 1 cut(s) 1482
Eco130I CCWWGG 3 cut(s) 180, 718, 1890
Eco57I CTGAAG 2 cut(s) 942, 1212
EcoO109I RGGNCCY 1 cut(s) 1450
EcoRII CCWGG 1 cut(s) 1988
EcoT14I CCWWGG 3 cut(s) 180, 718, 1890
EcoT22I ATGCAT 1 cut(s) 258
ErhI CCWWGG 3 cut(s) 180, 718, 1890
FaeI CATG 8 cut(s) 464, 1324, 1354, 1416, 1471, 1675, 1685, 1901
FalI AAGNNNNNCTT 6 cut(s) 72, 104, 940, 972, 1263, 1295
FatI CATG 8 cut(s) 460, 1320, 1350, 1412, 1467, 1671, 1681, 1897
FauI CCCGC 1 cut(s) 406
FauNDI CATATG 1 cut(s) 1192
FbaI TGATCA 1 cut(s) 336
Fnu4HI GCNGC 4 cut(s) 1338, 1435, 1785, 1995
FokI GGATG 6 cut(s) 2, 149, 455, 527, 1485, 1676
Fsp4HI GCNGC 4 cut(s) 1338, 1435, 1785, 1995
FspBI CTAG 2 cut(s) 975, 1584
GlaI GCGC 3 cut(s) 1998, 2044, 2078
GluI GCNGC 4 cut(s) 1338, 1435, 1785, 1995
GsuI CTGGAG 2 cut(s) 1536, 1957
HaeII RGCGCY 1 cut(s) 2000
HaeIII GGCC 4 cut(s) 161, 776, 1451, 1984
HapII CCGG 2 cut(s) 1083, 1845
HgaI GACGC 1 cut(s) 1966
HhaI GCGC 3 cut(s) 1999, 2045, 2079
Hin1II CATG 8 cut(s) 464, 1324, 1354, 1416, 1471, 1675, 1685, 1901
Hin6I GCGC 3 cut(s) 1997, 2043, 2077
HinP1I GCGC 3 cut(s) 1997, 2043, 2077
HincII GTYRAC 1 cut(s) 496
HindII GTYRAC 1 cut(s) 496
HindIII AAGCTT 1 cut(s) 1019
HinfI GANTC 8 cut(s) 487, 661, 808, 868, 978, 1028, 1275, 2025
HpaII CCGG 2 cut(s) 1083, 1845
HphI GGTGA 2 cut(s) 323, 1679
Hpy166II GTNNAC 3 cut(s) 496, 1089, 1267
Hpy188I TCNGA 9 cut(s) 283, 331, 700, 873, 1208, 1382, 1557, 1690, 1717
Hpy188III TCNNGA 9 cut(s) 228, 428, 447, 745, 843, 863, 1399, 1661, 1737
Hpy8I GTNNAC 3 cut(s) 496, 1089, 1267
Hpy99I CGWCG 1 cut(s) 1982
HpyAV CCTTC 9 cut(s) 30, 131, 538, 787, 792, 907, 1034, 1303, 1923
HpyCH4III ACNGT 5 cut(s) 136, 1824, 1871, 1967, 2094
HpyCH4IV ACGT 3 cut(s) 392, 678, 1849
HpyF10VI GCNNNNNNNGC 1 cut(s) 971
HpyF3I CTNAG 8 cut(s) 328, 736, 746, 1205, 1341, 1714, 1954, 2055
HpySE526I ACGT 3 cut(s) 392, 678, 1849
Hsp92II CATG 8 cut(s) 464, 1324, 1354, 1416, 1471, 1675, 1685, 1901
HspAI GCGC 3 cut(s) 1997, 2043, 2077
Ksp22I TGATCA 1 cut(s) 336
Kzo9I GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
LmnI GCTCC 7 cut(s) 575, 609, 914, 1334, 1479, 1757, 2004
Lsp1109I GCAGC 2 cut(s) 1349, 1771
LweI GCATC 5 cut(s) 97, 410, 477, 549, 1507
MaeI CTAG 2 cut(s) 975, 1584
MaeII ACGT 3 cut(s) 392, 678, 1849
MaeIII GTNAC 7 cut(s) 311, 758, 1323, 1522, 1667, 1865, 1947
MalI GATC 9 cut(s) 338, 435, 1070, 1241, 1403, 1625, 1638, 1771, 1877
MboI GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
MflI RGATCY 2 cut(s) 433, 1401
MlyI GAGTC 3 cut(s) 972, 1037, 2019
MmeI TCCRAC 1 cut(s) 1853
Mph1103I ATGCAT 1 cut(s) 258
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 6 cut(s) 635, 939, 1023, 1157, 1406, 1544
MspI CCGG 2 cut(s) 1083, 1845
MspR9I CCNGG 2 cut(s) 1084, 1990
Mva1269I GAATGC 2 cut(s) 612, 949
MvaI CCWGG 1 cut(s) 1990
MvnI CGCG 1 cut(s) 2077
MwoI GCNNNNNNNGC 1 cut(s) 971
NciI CCSGG 1 cut(s) 1084
NdeI CATATG 1 cut(s) 1192
NdeII GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
NlaIII CATG 8 cut(s) 464, 1324, 1354, 1416, 1471, 1675, 1685, 1901
NlaIV GGNNCC 2 cut(s) 160, 775
NmuCI GTSAC 4 cut(s) 311, 1667, 1865, 1947
NsiI ATGCAT 1 cut(s) 258
NspI RCATGY 3 cut(s) 1324, 1416, 1685
NspV TTCGAA 1 cut(s) 1907
PasI CCCWGGG 1 cut(s) 1989
PciI ACATGT 2 cut(s) 1320, 1681
PctI GAATGC 2 cut(s) 612, 949
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 5 cut(s) 487, 661, 808, 868, 1275
PflMI CCANNNNNTGG 2 cut(s) 1508, 1796
PkrI GCNGC 4 cut(s) 1339, 1436, 1786, 1996
Ple19I CGATCG 1 cut(s) 1626
PleI GAGTC 3 cut(s) 972, 1036, 2019
PpsI GAGTC 3 cut(s) 972, 1036, 2019
PscI ACATGT 2 cut(s) 1320, 1681
Psp6I CCWGG 1 cut(s) 1988
PspGI CCWGG 1 cut(s) 1988
PspN4I GGNNCC 2 cut(s) 160, 775
PspPI GGNCC 4 cut(s) 159, 774, 1450, 1982
PsrI GAACNNNNNNTAC 2 cut(s) 866, 898
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 2 cut(s) 433, 1401
PvuI CGATCG 1 cut(s) 1626
RsaI GTAC 5 cut(s) 237, 884, 921, 1268, 1826
RsaNI GTAC 5 cut(s) 236, 883, 920, 1267, 1825
SaqAI TTAA 6 cut(s) 635, 939, 1023, 1157, 1406, 1544
SatI GCNGC 4 cut(s) 1338, 1435, 1785, 1995
Sau3AI GATC 9 cut(s) 336, 433, 1068, 1239, 1401, 1623, 1636, 1769, 1875
Sau96I GGNCC 4 cut(s) 159, 774, 1450, 1982
ScaI AGTACT 1 cut(s) 1826
SchI GAGTC 3 cut(s) 972, 1037, 2019
ScrFI CCNGG 2 cut(s) 1084, 1990
SfaNI GCATC 5 cut(s) 97, 410, 477, 549, 1507
SfcI CTRYAG 1 cut(s) 1820
SfuI TTCGAA 1 cut(s) 1907
SmlI CTYRAG 4 cut(s) 100, 316, 863, 1640
SmoI CTYRAG 4 cut(s) 100, 316, 863, 1640
SsiI CCGC 8 cut(s) 300, 399, 930, 984, 1434, 1994, 2005, 2075
SspI AATATT 2 cut(s) 815, 1861
SspMI CTAG 2 cut(s) 975, 1584
StyD4I CCNGG 2 cut(s) 1082, 1988
StyI CCWWGG 3 cut(s) 180, 718, 1890
TaaI ACNGT 5 cut(s) 136, 1824, 1871, 1967, 2094
TaiI ACGT 3 cut(s) 395, 681, 1852
TaqI TCGA 5 cut(s) 369, 429, 1003, 1387, 1907
TatI WGTACW 2 cut(s) 1266, 1824
TauI GCSGC 2 cut(s) 1437, 1997
TfiI GAWTC 5 cut(s) 487, 661, 808, 868, 1275
Tru1I TTAA 6 cut(s) 635, 939, 1023, 1157, 1406, 1544
Tru9I TTAA 6 cut(s) 635, 939, 1023, 1157, 1406, 1544
TscAI CASTG 1 cut(s) 2097
TseFI GTSAC 4 cut(s) 311, 1667, 1865, 1947
TseI GCWGC 2 cut(s) 1337, 1784
Tsp45I GTSAC 4 cut(s) 311, 1667, 1865, 1947
TspDTI ATGAA 8 cut(s) 262, 774, 806, 1073, 1179, 1339, 1456, 1619
TspGWI ACGGA 2 cut(s) 49, 201
TspRI CASTG 1 cut(s) 2097
Van91I CCANNNNNTGG 2 cut(s) 1508, 1796
XapI RAATTY 7 cut(s) 241, 631, 652, 1153, 1390, 1539, 1815
XceI RCATGY 3 cut(s) 1324, 1416, 1685
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 2 cut(s) 975, 1584
ZrmI AGTACT 1 cut(s) 1826
Zsp2I ATGCAT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.