RchiOBHm_Chr1g0356551
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
48998528 .. 49003956
5429 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58190

Sequence Viewer

Length: 3069 bp
ATGGGGGAAGTTTTGGTTATGAACTTGGTTTTGATATACTCATTAGTTTTAAATTCCATGTCAATTTTCTGTTGTAGCTCCATGCAATTAAACCATCCGAGACTCCAAGGGAATGAGACAGATAGGCTGGCACTGCTAGCAATCAAAGCTCAAATACAACACGATCCCAACCGGGTCACAAGCTCATGGAATGTAACCCTTCACTTTTGCCTGTGGCATGGCGTCACCTGCAGTCGACGACATCGCCAAAGGGTGACAAAGCTGGAGTTGGGGTCTCTGGCGTTGGTGGGATCCATATCTCCACATATTGGAAATCTAAGCTTCTTAAGAGTGCTAAGTCTCGAGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGATTGCAGGTATTGCTTCTAAACAATAACTCATTTACTGGCACCATTCCTGTCGATATACCCAATTGCTTTGAACTCATCAGTCTCTTTCTTAATAGAAACAATCTAGTGGGTAAAATTCCTCTCAAACTGAGTTCCTTGTCAAAGCTTCGTTATTTTGATTTGGAAGTTAACAACTTAACAGGAGAGATCCCTCCTTCGTTGGGGAACCTTTCATCTCTAGAGAAATTTGGTTTAGGTTTTAATTACTTGGAAGGAAGCATCCCTAGTTCTCTATGCCAGTTGAAAAAATTAACAGTATTCTCTTTGGGCATAAATAGGTTGTCTGGTATCATCCCTTCCTGCATTTATAACCTCTCTGGTATAGTTCAATTCGAGCTAACACAAAACCAAATTCAAGGAAGTCTTCCATCAAATTTAAACCAAGCTTTTCCCCAACTCCGACTCTTTTCCATTGCCTTTAATCAATTTACTGGGGTCATACCTTCGTCAATATCCAATGCAACAAATCTTGTGGCATTTACATGTTCATCAAACAAACTCACTGGGCATGTGCCAAATTTACGAAATCTTCATAACCTTGGGATATTCAATGTCTATCAAAATAATCTTGGAAGCGGTAAACCTGGTGACTTGAGTTTTGTCTCAGAATTGAGCAATGCTACAAAGCTAAAATGGTTGCAGTTCGCCTACAACAATTTTGGAGGAACGTTGCCCACATCAATATCCAATCTCTCAACCAATCTCGAAATTCTTACAGTCGGAGGAAACCAACTACATGGAGGCATCCCAACTGGATTAGGGAATCTTGTCAAGTTGCAAGCACTAATTATGGAGGGAAACTCCTTCACAGGTTACATCCCTGCTGACATTGGGAGGCTTTCAAGGCTTAGGGAATTGGATCTTAACAACAACGAATTATCAGGGAGCATTCCGTCCTCTCTTGGAAACTTAACATTGTTAACATTACTCCACTTGCAAGAAAATAATCTTGAGGGTAGCATCCCTTCCAGCCTAGGGAAATACCACTGGTTAATAAAATTGGTTCTTTCTGGAAACAAACTGAATGGCACAATACCTCCTCAAGTTATTGGCCTCTCATCTTTATCAATAGGTTTGGGATTGGATGGAAACCAATTCACTGGTTCCCTTCCTATGGAGATTGGAAAATTGAAGAATCTAGGTATATTGGACATTTCTAACAACTTGTTATCAGGAGAACTTCCCAGCAGCCTCGGCAGTTGCGAGAGCTTAGAATTGCTGTACTTGCAAGGCAACTTCTTCTTGGGACCCATTCCTTCATCTATGAAGGAATTGAAAGGGATTCGAGAATTAGACCTCTCTCGCAATAATTTGTCAGGAGATATTCCACAGTTTTTCGAGGGCTTTGGAAACTTGAAGAATCTAAACCTATCCTTCAATCAGTTTTGGGGAGCAGTACCAACTGGTGGCATTTTTAAGAATGCAAGTGCGACTTCAGTTATTGGAAACATTAGGCTCTGCGGCGGTATTGCTAATTTTCACCTTCCAGTGTGCAAGACGAAAGGAGGAGGGTTGTCTAGCAAAGTGAAACTAATGATCTCTCTAGTTTCTGGGTTCACTCTTTTGGGACTAGCTGTGGTCCTGTTTTCTTTTCTTCTTAGGAAGAAAATGAAAGAAACTGAATTGAGCACTTTGGTGGACTCTATGTTGCAAGTTTCATATGCTAGTCTCCTAAACGCTACTAATGGGTTCTCTTCAACTAATTTGATTGGCATTGGCTCTTTTGGGTCTGTGTACAAAGGAATTCTTGCTGATGATGCAGCTGTTGTTGCTGTGAAGGTGTTTAACATGTTACATCGGGGAGCTTCTAAAAGTTTCATCTCCGAATGTGAGGCATTGAGAAACATCAGACATCGAAATCTGGTCAAGATTTTAACTGCATGCTCAAGTATTGATTTTAATGGCAATGATTTTAAGGCTCTTGTTTACGAGTTCATGGACAATGGGAGCTTAGAGGATTGGTTGCATCCATCTACTAGAACCGAAGAGCTAATAGAAGCACCCAAAAGTTTAAATCTAGTTCAAAGGGTCGACATCGCCATTGATGTTGCTAGTGCATTGGATTATCTTCACAACCACTGTGAAACACCAATTGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAGTGACTTGACTGGACATGTTTCTGACTTTGGGCTATCAAGGTTTCTAACAGAACCAACCACTAATGTGCCTGGAAATCAGTCAAGCTCCATTGGAATAAGAGGATCGGTTGGTTATGCTGCACCAGAGTATGGTATGGGAAGTGAGGTATCTGTATATGGGGATGTCTACAGCTTTGGCATTCTTTTGTTAGAAATGTTTACTGGGAAGAGACCCACTGATCACATGTTCAGGGACGGCTTGAATCTTCATAATTATGTGAAAACAGCTCTCCCTGAATGTGTTTCAGAGATTTCAAAATCACTAGTTCTTCAAGAAGGCACCGCCAGTGTCGTTGAAGCTCGCAAACAGTTGAGTGTTACACCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGAATTGCATGTTCTACTGACTCCCCAACAAACCGAAAGGATATCGGTGATGTTGCAGCTGAATTGAAGTCCATTAGGAAAAATCTACTTGGCTAG

Protein Analysis

1022

Amino Acids

110.93

Weight (kDa)

7.81

Isoelectric Point (pI)

28.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 78 5.8e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 98 - 283 1.9e-11 Leucine-rich repeat region
LRR_14 PF23598 309 - 483 9.8e-10 Leucine-rich repeat region
LRR_14 PF23598 504 - 601 5.7e-09 Leucine-rich repeat region
LRR_8 PF13855 565 - 607 8.4e-06 Leucine rich repeat
Pkinase PF00069 711 - 936 5.5e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 713 - 933 1.6e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000023)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G47090 AT3G47110 AT3G47570 AT3G47580 AT5G20480 AT5G20480 AT5G39390
fragaria_vesca FvH4_3g22040 FvH4_3g24240 FvH4_3g24241 FvH4_3g24242 FvH4_4g27240 FvH4_4g31380 FvH4_5g04880 FvH4_5g04890 FvH4_6g11670 FvH4_6g11670 FvH4_7g06550 FvH4_7g07260 FvH4_7g07260 FvH4_7g07340 FvH4_7g08810 FvH4_7g08811 FvH4_7g08820 FvH4_7g14360 FvH4_7g14370 FvH4_7g14380 FvH4_7g14382 FvH4_7g14383 FvH4_7g14384 FvH4_7g14410 FvH4_7g14500 FvH4_7g14700 FvH4_7g14701 FvH4_7g27190 FvH4_7g27192 FvH4_7g27210 FvH4_7g27211 FvH4_7g27212 FvH4_7g27213 FvH4_7g27220 FvH4_7g27510 FvH4_7g27510 FvH4_7g27520
malus_domestica MD00G1012100.v1.1 MD00G1013800.v1.1 MD00G1044000.v1.1 MD00G1044100.v1.1 MD00G1048100.v1.1 MD00G1048300.v1.1 MD00G1062600.v1.1 MD00G1062800.v1.1 MD00G1063000.v1.1 MD00G1105400.v1.1 MD00G1150400.v1.1 MD00G1155100.v1.1 MD00G1178900.v1.1 MD01G1096000.v1.1 MD01G1096100.v1.1 MD01G1096400.v1.1 MD01G1096600.v1.1 MD01G1097800.v1.1 MD01G1097900.v1.1 MD01G1111900.v1.1 MD01G1112100.v1.1 MD01G1132000.v1.1 MD01G1132100.v1.1 MD01G1132300.v1.1 MD01G1150100.v1.1 MD01G1150200.v1.1 MD01G1150300.v1.1 MD01G1150400.v1.1 MD01G1150600.v1.1 MD01G1150800.v1.1 MD01G1150900.v1.1 MD01G1151000.v1.1 MD01G1151200.v1.1 MD01G1151500.v1.1 MD01G1151800.v1.1 MD01G1151900.v1.1 MD02G1223500.v1.1 MD02G1223700.v1.1 MD02G1224000.v1.1 MD02G1224600.v1.1 MD03G1072600.v1.1 MD03G1281000.v1.1 MD07G1088900.v1.1 MD07G1089300.v1.1 MD07G1090300.v1.1 MD07G1090700.v1.1 MD07G1090900.v1.1 MD07G1164700.v1.1 MD07G1164900.v1.1 MD07G1194600.v1.1 MD07G1216600.v1.1 MD07G1217700.v1.1 MD07G1218200.v1.1 MD07G1218300.v1.1 MD07G1218400.v1.1 MD07G1218700.v1.1 MD07G1218900.v1.1 MD07G1219100.v1.1 MD07G1219200.v1.1 MD07G1219400.v1.1 MD07G1219600.v1.1 MD07G1219700.v1.1 MD07G1219800.v1.1 MD07G1220100.v1.1 MD10G1304200.v1.1 MD11G1095000.v1.1 MD11G1100400.v1.1 MD11G1101400.v1.1 MD11G1101900.v1.1 MD11G1102300.v1.1 MD11G1103100.v1.1 MD11G1103300.v1.1 MD11G1103400.v1.1 MD11G1103600.v1.1 MD11G1104000.v1.1 MD11G1104600.v1.1 MD11G1105100.v1.1 MD11G1105600.v1.1 MD11G1106100.v1.1 MD11G1106200.v1.1 MD11G1106400.v1.1 MD11G1106800.v1.1 MD11G1107200.v1.1 MD11G1107400.v1.1 MD11G1107800.v1.1 MD11G1261100.v1.1 MD13G1088400.v1.1 MD13G1138200.v1.1 MD15G1106800.v1.1 MD15G1402200.v1.1 MD15G1439200.v1.1
prunus_persica Prupe.2G115800_v2.0.a1 Prupe.2G116000_v2.0.a1 Prupe.2G116100_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116200_v2.0.a1 Prupe.2G116300_v2.0.a1 Prupe.2G248400_v2.0.a1 Prupe.6G074700_v2.0.a1 Prupe.6G074800_v2.0.a1 Prupe.6G075000_v2.0.a1 Prupe.6G075300_v2.0.a1 Prupe.6G125600_v2.0.a1 Prupe.6G275200_v2.0.a1 Prupe.8G139600_v2.0.a1
pyrus_communis pycom01g11840 pycom01g11950 pycom01g11960 pycom01g12050 pycom01g12060 pycom01g12140 pycom01g12150 pycom01g12170 pycom01g12310 pycom01g12320 pycom01g12470 pycom01g12510 pycom01g16820 pycom01g16840 pycom01g16870 pycom01g16890 pycom01g19520 pycom01g19530 pycom02g17940 pycom02g17970 pycom02g17990 pycom02g18040 pycom02g18050 pycom02g19050 pycom02g19160 pycom02g19200 pycom02g19240 pycom02g19300 pycom02g21740 pycom03g05880 pycom03g07230 pycom07g07140 pycom07g07150 pycom07g07180 pycom07g07220 pycom07g07230 pycom07g07240 pycom07g07250 pycom07g07280 pycom07g07310 pycom07g07320 pycom07g07340 pycom07g07350 pycom07g07380 pycom07g07410 pycom07g07440 pycom07g18340 pycom07g19880 pycom07g19890 pycom07g20140 pycom07g22840 pycom10g08760 pycom11g07890 pycom11g08450 pycom11g08460 pycom11g08500 pycom11g08550 pycom11g08560 pycom11g08580 pycom11g08590 pycom11g08610 pycom11g08640 pycom11g08690 pycom11g08710 pycom12g06740 pycom13g07610 pycom13g07620 pycom15g09740 pycom15g09760
rosa_chinensis RchiOBHm_Chr0c29g0501091 RchiOBHm_Chr0c29g0501161 RchiOBHm_Chr1g0325541 RchiOBHm_Chr1g0325551 RchiOBHm_Chr1g0326131 RchiOBHm_Chr1g0331671 RchiOBHm_Chr1g0335021 RchiOBHm_Chr1g0335031 RchiOBHm_Chr1g0336031 RchiOBHm_Chr1g0336041 RchiOBHm_Chr1g0337391 RchiOBHm_Chr1g0337411 RchiOBHm_Chr1g0341681 RchiOBHm_Chr1g0344081 RchiOBHm_Chr1g0344141 RchiOBHm_Chr1g0344181 RchiOBHm_Chr1g0344241 RchiOBHm_Chr1g0349321 RchiOBHm_Chr1g0353721 RchiOBHm_Chr1g0355381 RchiOBHm_Chr1g0355461 RchiOBHm_Chr1g0355471 RchiOBHm_Chr1g0355501 RchiOBHm_Chr1g0355511 RchiOBHm_Chr1g0355521 RchiOBHm_Chr1g0355531 RchiOBHm_Chr1g0355681 RchiOBHm_Chr1g0355741 RchiOBHm_Chr1g0355751 RchiOBHm_Chr1g0355911 RchiOBHm_Chr1g0355921 RchiOBHm_Chr1g0355931 RchiOBHm_Chr1g0355941 RchiOBHm_Chr1g0356221 RchiOBHm_Chr1g0356241 RchiOBHm_Chr1g0356251 RchiOBHm_Chr1g0356421 RchiOBHm_Chr1g0356431 RchiOBHm_Chr1g0356511 RchiOBHm_Chr1g0356551 RchiOBHm_Chr1g0356561 RchiOBHm_Chr1g0356571 RchiOBHm_Chr1g0356581 RchiOBHm_Chr1g0369971 RchiOBHm_Chr1g0374291 RchiOBHm_Chr1g0374361 RchiOBHm_Chr1g0374381 RchiOBHm_Chr1g0374391 RchiOBHm_Chr3g0463391 RchiOBHm_Chr4g0395331 RchiOBHm_Chr4g0395341 RchiOBHm_Chr4g0408081 RchiOBHm_Chr4g0408651 RchiOBHm_Chr4g0409651 RchiOBHm_Chr4g0409661 RchiOBHm_Chr5g0043431 RchiOBHm_Chr5g0043461 RchiOBHm_Chr5g0043501 RchiOBHm_Chr5g0043511 RchiOBHm_Chr5g0043551 RchiOBHm_Chr5g0076381 RchiOBHm_Chr7g0210591 RchiOBHm_Chr7g0210601 RchiOBHm_Chr7g0215121
rosa_laevigata RLG00000002060 RLG00000008675 RLG00000015055 RLG00000019549 RLG00000021272 RLG00000021645 RLG00000024787 RLG00000026741 RLG00000026742 RLG00000026743 RLG00000026744 RLG00000026745 RLG00000027755 RLG00000028091 RLG00000028097 RLG00000028114 RLG00000028116 RLG00000028130 RLG00000028132 RLG00000028135 RLG00000028136 RLG00000028137 RLG00000028140 RLG00000028141 RLG00000028144 RLG00000028148 RLG00000028264 RLG00000028557 RLG00000028915 RLG00000028916 RLG00000028920 RLG00000028925 RLG00000028927 RLG00000029272 RLG00000029273 RLG00000029275 RLG00000029276 RLG00000029277 RLG00000029278 RLG00000029279 RLG00000029403 RLG00000029404 RLG00000029685 RLG00000029725 RLG00000030007 RLG00000030132 RLG00000030141 RLG00000034188 RLG00000034191 RLG00000034192 RLG00000034194 RLG00000034197 RLG00000034200 RLG00000034201 RLG00000034202 RLG00000034203 RLG00000034205 RLG00000034206 RLG00000034488
rosa_multiflora Rmu_co8094350.1_g000001 Rmu_co8146674.1_g000001 Rmu_co8468523.1_g000001 Rmu_sc0000019.1_g000002 Rmu_sc0000019.1_g000005 Rmu_sc0000019.1_g000006 Rmu_sc0000273.1_g000007 Rmu_sc0000281.1_g000006 Rmu_sc0000281.1_g000008 Rmu_sc0000281.1_g000011 Rmu_sc0000281.1_g000012 Rmu_sc0000281.1_g000024 Rmu_sc0000281.1_g000025 Rmu_sc0000574.1_g000064 Rmu_sc0000756.1_g000004 Rmu_sc0000827.1_g000003 Rmu_sc0000923.1_g000006 Rmu_sc0001001.1_g000013 Rmu_sc0001001.1_g000014 Rmu_sc0001001.1_g000015 Rmu_sc0001001.1_g000017 Rmu_sc0001053.1_g000015 Rmu_sc0001779.1_g000001 Rmu_sc0002037.1_g000002 Rmu_sc0002037.1_g000005 Rmu_sc0002037.1_g000020 Rmu_sc0002037.1_g000024 Rmu_sc0002276.1_g000008 Rmu_sc0002297.1_g000008 Rmu_sc0002297.1_g000014 Rmu_sc0002791.1_g000008 Rmu_sc0002914.1_g000004 Rmu_sc0004168.1_g000032 Rmu_sc0004484.1_g000005 Rmu_sc0004484.1_g000008 Rmu_sc0004484.1_g000014 Rmu_sc0004705.1_g000015 Rmu_sc0004705.1_g000016 Rmu_sc0004705.1_g000038 Rmu_sc0004705.1_g000042 Rmu_sc0005316.1_g000008 Rmu_sc0005316.1_g000009 Rmu_sc0005492.1_g000001 Rmu_sc0005947.1_g000022 Rmu_sc0006746.1_g000004 Rmu_sc0006877.1_g000017 Rmu_sc0006877.1_g000020 Rmu_sc0007075.1_g000006 Rmu_sc0007127.1_g000001 Rmu_sc0007509.1_g000002 Rmu_sc0007509.1_g000011 Rmu_sc0007509.1_g000013 Rmu_sc0007509.1_g000014 Rmu_sc0008140.1_g000008 Rmu_sc0011565.1_g000001 Rmu_sc0011910.1_g000026 Rmu_sc0012615.1_g000005 Rmu_sc0020317.1_g000002 Rmu_sc0023485.1_g000001 Rmu_sc0030694.1_g000001 Rmu_sc0035056.1_g000002 Rmu_sc0036236.1_g000001 Rmu_ssc0000007.1_g000015 Rmu_ssc0000007.1_g000017 Rmu_ssc0000007.1_g000018 Rmu_ssc0000067.1_g000053 Rmu_ssc0000067.1_g000064 Rmu_ssc0000434.1_g000004
rosa_roxburghii Rroxscaffold_1G00037430 Rroxscaffold_4G00283560 Rroxscaffold_4G00299470 Rroxscaffold_4G00299480 Rroxscaffold_4G00299530 Rroxscaffold_4G00299760 Rroxscaffold_4G00299910 Rroxscaffold_4G00300040 Rroxscaffold_4G00300070 Rroxscaffold_4G00300110 Rroxscaffold_4G00300130 Rroxscaffold_4G00300160 Rroxscaffold_4G00300270 Rroxscaffold_4G00300290 Rroxscaffold_4G00300330 Rroxscaffold_4G00300360 Rroxscaffold_4G00300380 Rroxscaffold_4G00300390 Rroxscaffold_4G00300440 Rroxscaffold_4G00301720 Rroxscaffold_4G00305650 Rroxscaffold_4G00309990 Rroxscaffold_4G00310070 Rroxscaffold_4G00314340 Rroxscaffold_4G00314420 Rroxscaffold_4G00314430 Rroxscaffold_6G00416580 Rroxscaffold_6G00416590 Rroxscaffold_7G00190690
rosa_rugosa Rorug01G0052500 Rorug01G0052500 Rorug01G0052600 Rorug01G0052700 Rorug01G0052800 Rorug01G0117900 Rorug01G0118600 Rorug01G0135100.1 Rorug01G0135200.1 Rorug01G0171600 Rorug01G0172100 Rorug01G0172200 Rorug01G0172300 Rorug01G0202800 Rorug01G0232100 Rorug01G0237100 Rorug01G0247000 Rorug01G0247200 Rorug01G0247200 Rorug01G0247500 Rorug01G0247600 Rorug01G0247700 Rorug01G0247900 Rorug01G0248700 Rorug01G0248800 Rorug01G0250200 Rorug01G0284400 Rorug01G0382800 Rorug03G0064400 Rorug03G0358000 Rorug05G0206000 Rorug05G0206200 Rorug05G0206600 Rorug05G0206700 Rorug05G0206800
rosa_samantha Rh1AG153900 Rh5DG475300
rosa_wichuraiana Rw0G012210 Rw0G013940 Rw1G005670 Rw1G009590 Rw1G010620 Rw1G011750 Rw1G012630 Rw1G015490 Rw1G015510 Rw1G018700 Rw1G019510 Rw1G019520 Rw1G020170 Rw1G021750 Rw1G022880 Rw1G022890 Rw1G022910 Rw1G022940 Rw1G022950 Rw1G022970 Rw1G022990 Rw1G023110 Rw1G023260 Rw1G023350 Rw1G034090 Rw1G034110 Rw3G010360 Rw5G027080 Rw5G030210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 744
AarI CACCTGC 1 cut(s) 236
Acc36I ACCTGC 2 cut(s) 236, 391
AccB1I GGYRCC 2 cut(s) 434, 2888
AccB7I CCANNNNNTGG 3 cut(s) 308, 1841, 2699
AccI GTMKAC 3 cut(s) 235, 2466, 2736
AciI CCGC 4 cut(s) 1011, 1896, 1899, 2892
AclI AACGTT 1 cut(s) 1103
AclWI GGATC 6 cut(s) 158, 285, 298, 577, 1302, 2680
AcsI RAATTY 8 cut(s) 52, 510, 620, 786, 808, 952, 1143, 2178
AcuI CTGAAG 1 cut(s) 1854
AcyI GRCGYC 1 cut(s) 222
AfaI GTAC 3 cut(s) 1658, 1833, 2171
AfiI CCNNNNNNNGG 7 cut(s) 308, 380, 596, 1410, 1549, 1841, 2699
AflII CTTAAG 1 cut(s) 325
AflIII ACRYGT 4 cut(s) 917, 2223, 2584, 2793
AhlI ACTAGT 1 cut(s) 2872
AjnI CCWGG 2 cut(s) 1018, 2638
AleI CACNNNNGTG 2 cut(s) 2069, 2633
Alw21I GWGCWC 1 cut(s) 2066
Alw26I GTCTC 8 cut(s) 94, 110, 279, 344, 482, 1042, 2108, 2773
AlwI GGATC 6 cut(s) 158, 285, 298, 577, 1302, 2680
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 1 cut(s) 1486
ApeKI GCWGC 4 cut(s) 1623, 2195, 2687, 3029
ApoI RAATTY 8 cut(s) 52, 510, 620, 786, 808, 952, 1143, 2178
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
AspA2I CCTAGG 1 cut(s) 1408
AspS9I GGNCC 2 cut(s) 1682, 2014
AsuC2I CCSGG 1 cut(s) 173
AsuHPI GGTGA 5 cut(s) 217, 265, 1034, 1907, 3032
AsuNHI GCTAGC 1 cut(s) 136
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 2 cut(s) 1682, 2014
AvrII CCTAGG 1 cut(s) 1408
BamHI GGATCC 1 cut(s) 290
BanI GGYRCC 2 cut(s) 434, 2888
BarI GAAGNNNNNNTAC 4 cut(s) 715, 747, 1384, 1416
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 1 cut(s) 2066
BbvI GCAGC 4 cut(s) 1635, 2207, 2674, 3041
BccI CCATC 4 cut(s) 102, 811, 1514, 2413
BceAI ACGGC 1 cut(s) 2821
BciT130I CCWGG 2 cut(s) 1020, 2640
BclI TGATCA 1 cut(s) 2788
BcnI CCSGG 1 cut(s) 173
BcoDI GTCTC 8 cut(s) 94, 110, 279, 344, 482, 1042, 2108, 2773
BcuI ACTAGT 1 cut(s) 2872
BfmI CTRYAG 2 cut(s) 229, 2737
BfrI CTTAAG 1 cut(s) 325
BfuAI ACCTGC 2 cut(s) 236, 391
BisI GCNGC 5 cut(s) 1624, 1897, 2196, 2688, 3030
BlnI CCTAGG 1 cut(s) 1408
BlsI GCNGC 5 cut(s) 1625, 1898, 2197, 2689, 3031
Bme1390I CCNGG 3 cut(s) 173, 1020, 2640
Bme18I GGWCC 2 cut(s) 1682, 2014
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 2 cut(s) 1682, 2014
BmiI GGNNCC 7 cut(s) 292, 436, 602, 1540, 1683, 1684, 2890
BmrFI CCNGG 3 cut(s) 173, 1020, 2640
BmrI ACTGGG 3 cut(s) 876, 948, 2781
BmsI GCATC 5 cut(s) 663, 1188, 1404, 2182, 2410
BmtI GCTAGC 1 cut(s) 140
BmuI ACTGGG 3 cut(s) 876, 948, 2781
BpiI GAAGAC 1 cut(s) 791
BplI GAGNNNNNCTC 2 cut(s) 1220, 1252
BpmI CTGGAG 1 cut(s) 284
Bpu10I CCTNAGC 1 cut(s) 1283
BpuEI CTTGAG 5 cut(s) 1048, 1406, 1461, 2305, 2528
BpuMI CCSGG 1 cut(s) 173
BsaBI GATNNNNATC 1 cut(s) 295
BsaHI GRCGYC 1 cut(s) 222
BsaI GGTCTC 2 cut(s) 279, 2773
BsaJI CCNNGG 4 cut(s) 106, 973, 1408, 1627
BsaXI ACNNNNNCTCC 4 cut(s) 257, 287, 1456, 1486
Bsc4I CCNNNNNNNGG 7 cut(s) 308, 380, 596, 1410, 1549, 1841, 2699
Bse3DI GCAATG 3 cut(s) 846, 1057, 2347
Bse8I GATNNNNATC 1 cut(s) 295
BseBI CCWGG 2 cut(s) 1020, 2640
BseDI CCNNGG 4 cut(s) 106, 973, 1408, 1627
BseGI GGATG 9 cut(s) 94, 654, 726, 1179, 1251, 1395, 1525, 2401, 2737
BseJI GATNNNNATC 1 cut(s) 295
BseLI CCNNNNNNNGG 7 cut(s) 308, 380, 596, 1410, 1549, 1841, 2699
BseMI GCAATG 3 cut(s) 846, 1057, 2347
BseMII CTCAG 2 cut(s) 515, 1053
BseRI GAGGAG 3 cut(s) 363, 1464, 1956
BseXI GCAGC 4 cut(s) 1635, 2207, 2674, 3041
BseYI CCCAGC 1 cut(s) 1619
BsgI GTGCAG 1 cut(s) 2673
BshFI GGCC 1 cut(s) 1488
BshNI GGYRCC 2 cut(s) 434, 2888
BsiHKAI GWGCWC 1 cut(s) 2066
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 1 cut(s) 172
BslFI GGGAC 3 cut(s) 1695, 2016, 2816
BslI CCNNNNNNNGG 7 cut(s) 308, 380, 596, 1410, 1549, 1841, 2699
BsmAI GTCTC 8 cut(s) 94, 110, 279, 344, 482, 1042, 2108, 2773
BsmFI GGGAC 3 cut(s) 1695, 2016, 2816
BsmI GAATGC 3 cut(s) 1323, 1861, 2748
BsnI GGCC 1 cut(s) 1488
Bso31I GGTCTC 2 cut(s) 279, 2773
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 1 cut(s) 2066
Bsp1407I TGTACA 1 cut(s) 2169
Bsp143I GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
BspACI CCGC 4 cut(s) 1011, 1896, 1899, 2892
BspANI GGCC 1 cut(s) 1488
BspCNI CTCAG 2 cut(s) 516, 1052
BspLI GGNNCC 7 cut(s) 292, 436, 602, 1540, 1683, 1684, 2890
BspMAI CTGCAG 1 cut(s) 233
BspMI ACCTGC 2 cut(s) 236, 391
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 6 cut(s) 158, 285, 298, 577, 1302, 2680
BspQI GCTCTTC 1 cut(s) 2415
BspT107I GGYRCC 2 cut(s) 434, 2888
BspTI CTTAAG 1 cut(s) 325
BspTNI GGTCTC 2 cut(s) 279, 2773
BsrDI GCAATG 3 cut(s) 846, 1057, 2347
BsrGI TGTACA 1 cut(s) 2169
BssECI CCNNGG 4 cut(s) 106, 973, 1408, 1627
BssMI GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
BssNI GRCGYC 1 cut(s) 222
BssT1I CCWWGG 3 cut(s) 106, 973, 1408
Bst2UI CCWGG 2 cut(s) 1020, 2640
Bst4CI ACNGT 6 cut(s) 691, 1153, 1767, 2516, 2570, 2919
Bst6I CTCTTC 4 cut(s) 2134, 2415, 2771, 2940
BstACI GRCGYC 1 cut(s) 222
BstAFI CTTAAG 1 cut(s) 325
BstAPI GCANNNNNTGC 2 cut(s) 397, 406
BstAUI TGTACA 1 cut(s) 2169
BstC8I GCNNGC 5 cut(s) 129, 138, 1215, 2317, 2911
BstDEI CTNAG 8 cut(s) 317, 335, 524, 1039, 1283, 1645, 2033, 2386
BstF5I GGATG 9 cut(s) 94, 654, 726, 1179, 1251, 1395, 1525, 2401, 2737
BstKTI GATC 8 cut(s) 166, 293, 585, 1297, 1974, 2542, 2675, 2791
BstMAI GTCTC 8 cut(s) 94, 110, 279, 344, 482, 1042, 2108, 2773
BstMBI GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
BstNI CCWGG 2 cut(s) 1020, 2640
BstNSI RCATGY 7 cut(s) 921, 947, 2227, 2319, 2588, 2797, 2985
BstSCI CCNGG 3 cut(s) 171, 1018, 2638
BstSFI CTRYAG 2 cut(s) 229, 2737
BstV1I GCAGC 4 cut(s) 1635, 2207, 2674, 3041
BstV2I GAAGAC 1 cut(s) 791
BstX2I RGATCY 3 cut(s) 290, 582, 1294
BstXI CCANNNNNNTGG 2 cut(s) 1172, 1535
BstYI RGATCY 3 cut(s) 290, 582, 1294
BsuRI GGCC 1 cut(s) 1488
BtgZI GCGATG 2 cut(s) 227, 2455
BtsCI GGATG 9 cut(s) 94, 654, 726, 1179, 1251, 1395, 1525, 2401, 2737
BtsI GCAGTG 1 cut(s) 131
BtsIMutI CAGTG 9 cut(s) 131, 936, 1420, 1533, 1929, 2512, 2575, 2784, 2902
BveI ACCTGC 2 cut(s) 236, 391
Cac8I GCNNGC 5 cut(s) 129, 138, 1215, 2317, 2911
Cfr13I GGNCC 2 cut(s) 1682, 2014
CseI GACGC 1 cut(s) 211
CsiI ACCWGGT 1 cut(s) 1018
Csp6I GTAC 3 cut(s) 1657, 1832, 2170
CspCI CAANNNNNGTGG 2 cut(s) 888, 923
CviQI GTAC 3 cut(s) 1657, 1832, 2170
DdeI CTNAG 8 cut(s) 317, 335, 524, 1039, 1283, 1645, 2033, 2386
DpnI GATC 8 cut(s) 165, 292, 584, 1296, 1973, 2541, 2674, 2790
DpnII GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
DraI TTTAAA 3 cut(s) 51, 813, 2448
Eam1104I CTCTTC 4 cut(s) 2134, 2415, 2771, 2940
EarI CTCTTC 4 cut(s) 2134, 2415, 2771, 2940
Eco130I CCWWGG 3 cut(s) 106, 973, 1408
Eco31I GGTCTC 2 cut(s) 279, 2773
Eco32I GATATC 1 cut(s) 3016
Eco47I GGWCC 2 cut(s) 1682, 2014
Eco57I CTGAAG 1 cut(s) 1854
Eco88I CYCGRG 1 cut(s) 341
EcoO109I RGGNCCY 1 cut(s) 1682
EcoRI GAATTC 1 cut(s) 2178
EcoRII CCWGG 2 cut(s) 1018, 2638
EcoRV GATATC 1 cut(s) 3016
EcoT14I CCWWGG 3 cut(s) 106, 973, 1408
ErhI CCWWGG 3 cut(s) 106, 973, 1408
FalI AAGNNNNNCTT 6 cut(s) 783, 815, 1852, 1884, 2166, 2198
FaqI GGGAC 3 cut(s) 1695, 2016, 2816
FauNDI CATATG 1 cut(s) 2095
FbaI TGATCA 1 cut(s) 2788
FblI GTMKAC 3 cut(s) 235, 2466, 2736
Fnu4HI GCNGC 5 cut(s) 1624, 1897, 2196, 2688, 3030
FokI GGATG 9 cut(s) 81, 641, 713, 1166, 1238, 1382, 1532, 2388, 2744
Fsp4HI GCNGC 5 cut(s) 1624, 1897, 2196, 2688, 3030
GluI GCNGC 5 cut(s) 1624, 1897, 2196, 2688, 3030
GsaI CCCAGC 1 cut(s) 1623
GsuI CTGGAG 1 cut(s) 284
HaeIII GGCC 1 cut(s) 1488
HapII CCGG 1 cut(s) 172
HgaI GACGC 1 cut(s) 211
Hin1I GRCGYC 1 cut(s) 222
HincII GTYRAC 4 cut(s) 236, 565, 1356, 2467
HindII GTYRAC 4 cut(s) 236, 565, 1356, 2467
HindIII AAGCTT 3 cut(s) 319, 539, 819
HinfI GANTC 9 cut(s) 102, 837, 1198, 1570, 1717, 1795, 2075, 2812, 2993
HpaI GTTAAC 2 cut(s) 565, 1356
HpaII CCGG 1 cut(s) 172
HphI GGTGA 5 cut(s) 217, 265, 1034, 1907, 3032
Hpy188I TCNGA 8 cut(s) 99, 836, 1042, 1157, 2260, 2285, 2593, 2857
Hpy99I CGWCG 1 cut(s) 240
HpyCH4III ACNGT 6 cut(s) 691, 1153, 1767, 2516, 2570, 2919
HpyCH4IV ACGT 1 cut(s) 1103
HpyF3I CTNAG 8 cut(s) 317, 335, 524, 1039, 1283, 1645, 2033, 2386
HpySE526I ACGT 1 cut(s) 1103
Hsp92I GRCGYC 1 cut(s) 222
KflI GGGWCCC 1 cut(s) 1682
Ksp22I TGATCA 1 cut(s) 2788
KspAI GTTAAC 2 cut(s) 565, 1356
Kzo9I GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
LguI GCTCTTC 1 cut(s) 2415
LmnI GCTCC 6 cut(s) 83, 1320, 1826, 2237, 2382, 2660
Lsp1109I GCAGC 4 cut(s) 1635, 2207, 2674, 3041
LweI GCATC 5 cut(s) 663, 1188, 1404, 2182, 2410
MabI ACCWGGT 1 cut(s) 1018
MaeII ACGT 1 cut(s) 1103
MaeIII GTNAC 9 cut(s) 175, 193, 223, 253, 1022, 1247, 2226, 2570, 2926
MalI GATC 8 cut(s) 165, 292, 584, 1296, 1973, 2541, 2674, 2790
MboI GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
MfeI CAATTG 2 cut(s) 457, 2526
MflI RGATCY 3 cut(s) 290, 582, 1294
MhlI GDGCHC 1 cut(s) 2066
MlyI GAGTC 4 cut(s) 96, 831, 2069, 2987
MmeI TCCRAC 2 cut(s) 859, 1135
MslI CAYNNNNRTG 4 cut(s) 916, 2069, 2633, 2823
MspA1I CMGCKG 2 cut(s) 2198, 3032
MspCI CTTAAG 1 cut(s) 325
MspI CCGG 1 cut(s) 172
MspR9I CCNGG 3 cut(s) 173, 1020, 2640
MunI CAATTG 2 cut(s) 457, 2526
Mva1269I GAATGC 3 cut(s) 1323, 1861, 2748
MvaI CCWGG 2 cut(s) 1020, 2640
NciI CCSGG 1 cut(s) 173
NdeI CATATG 1 cut(s) 2095
NdeII GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
NheI GCTAGC 1 cut(s) 136
NlaIV GGNNCC 7 cut(s) 292, 436, 602, 1540, 1683, 1684, 2890
NmeAIII GCCGAG 1 cut(s) 1608
NmuCI GTSAC 5 cut(s) 175, 223, 253, 1022, 2570
NspI RCATGY 7 cut(s) 921, 947, 2227, 2319, 2588, 2797, 2985
OliI CACNNNNGTG 2 cut(s) 2069, 2633
PaeI GCATGC 1 cut(s) 2319
PaeR7I CTCGAG 1 cut(s) 341
PaqCI CACCTGC 1 cut(s) 236
PciI ACATGT 4 cut(s) 917, 2223, 2584, 2793
PciSI GCTCTTC 1 cut(s) 2415
PcsI WCGNNNNNNNCGW 1 cut(s) 1635
PctI GAATGC 3 cut(s) 1323, 1861, 2748
PfeI GAWTC 5 cut(s) 1198, 1570, 1717, 1795, 2812
PflMI CCANNNNNTGG 3 cut(s) 308, 1841, 2699
PkrI GCNGC 5 cut(s) 1625, 1898, 2197, 2689, 3031
PleI GAGTC 4 cut(s) 96, 831, 2069, 2987
PpsI GAGTC 4 cut(s) 96, 831, 2069, 2987
PpuMI RGGWCCY 1 cut(s) 1682
PscI ACATGT 4 cut(s) 917, 2223, 2584, 2793
PsiI TTATAA 1 cut(s) 744
Psp1406I AACGTT 1 cut(s) 1103
Psp5II RGGWCCY 1 cut(s) 1682
Psp6I CCWGG 2 cut(s) 1018, 2638
PspFI CCCAGC 1 cut(s) 1619
PspGI CCWGG 2 cut(s) 1018, 2638
PspN4I GGNNCC 7 cut(s) 292, 436, 602, 1540, 1683, 1684, 2890
PspPI GGNCC 2 cut(s) 1682, 2014
PspPPI RGGWCCY 1 cut(s) 1682
PstI CTGCAG 1 cut(s) 233
PsuI RGATCY 3 cut(s) 290, 582, 1294
PvuII CAGCTG 2 cut(s) 2198, 3032
RsaI GTAC 3 cut(s) 1658, 1833, 2171
RsaNI GTAC 3 cut(s) 1657, 1832, 2170
RseI CAYNNNNRTG 4 cut(s) 916, 2069, 2633, 2823
SalI GTCGAC 2 cut(s) 234, 2465
SapI GCTCTTC 1 cut(s) 2415
SatI GCNGC 5 cut(s) 1624, 1897, 2196, 2688, 3030
Sau3AI GATC 8 cut(s) 163, 290, 582, 1294, 1971, 2539, 2672, 2788
Sau96I GGNCC 2 cut(s) 1682, 2014
SchI GAGTC 4 cut(s) 96, 831, 2069, 2987
ScrFI CCNGG 3 cut(s) 173, 1020, 2640
SduI GDGCHC 1 cut(s) 2066
SexAI ACCWGGT 1 cut(s) 1018
SfaNI GCATC 5 cut(s) 663, 1188, 1404, 2182, 2410
SfcI CTRYAG 2 cut(s) 229, 2737
Sfr274I CTCGAG 1 cut(s) 341
SinI GGWCC 2 cut(s) 1682, 2014
SlaI CTCGAG 1 cut(s) 341
SmiMI CAYNNNNRTG 4 cut(s) 916, 2069, 2633, 2823
SmlI CTYRAG 7 cut(s) 325, 341, 1027, 1385, 1476, 2320, 2543
SmoI CTYRAG 7 cut(s) 325, 341, 1027, 1385, 1476, 2320, 2543
SpeI ACTAGT 1 cut(s) 2872
SphI GCATGC 1 cut(s) 2319
SsiI CCGC 4 cut(s) 1011, 1896, 1899, 2892
StyD4I CCNGG 3 cut(s) 171, 1018, 2638
StyI CCWWGG 3 cut(s) 106, 973, 1408
TaaI ACNGT 6 cut(s) 691, 1153, 1767, 2516, 2570, 2919
TaiI ACGT 1 cut(s) 1106
TaqI TCGA 9 cut(s) 235, 342, 447, 768, 1140, 1720, 1773, 2290, 2466
TatI WGTACW 2 cut(s) 1656, 2169
TauI GCSGC 1 cut(s) 1899
TfiI GAWTC 5 cut(s) 1198, 1570, 1717, 1795, 2812
TscAI CASTG 9 cut(s) 138, 943, 1427, 1540, 1929, 2519, 2575, 2791, 2902
TseFI GTSAC 5 cut(s) 175, 223, 253, 1022, 2570
TseI GCWGC 4 cut(s) 1623, 2195, 2687, 3029
Tsp45I GTSAC 5 cut(s) 175, 223, 253, 1022, 2570
TspGWI ACGGA 1 cut(s) 1317
TspRI CASTG 9 cut(s) 138, 943, 1427, 1540, 1929, 2519, 2575, 2791, 2902
Van91I CCANNNNNTGG 3 cut(s) 308, 1841, 2699
Vha464I CTTAAG 1 cut(s) 325
VpaK11BI GGWCC 2 cut(s) 1682, 2014
XapI RAATTY 8 cut(s) 52, 510, 620, 786, 808, 952, 1143, 2178
XbaI TCTAGA 1 cut(s) 613
XceI RCATGY 7 cut(s) 921, 947, 2227, 2319, 2588, 2797, 2985
XhoI CTCGAG 1 cut(s) 341
XmaJI CCTAGG 1 cut(s) 1408
XmiI GTMKAC 3 cut(s) 235, 2466, 2736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.