FvH4_1g20081

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000109
Physical Location & Seq
Reverse (-)
12262694 .. 12263955
1262 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g20081.t1

Sequence Viewer

Length: 1044 bp
ATGTCAGATGAAGTCGCCAATTATTTTGCTGATGCTCTGGCCATCATAGAGGGGGACAGACCTCTCAATGGTGTTGCTCGAGTTGCAGCGGCTCCGCCACATGTTTTTGCAGTCGGGAGATTGCTTTCTCTTGGTCGTCGTAAACCAGATCCTCGTGCCAGCATTGGTACACTCACCTCCGTTTGGGATCTACAAAATAGACTCCAGATTAGAGCACATGGAGATTGGTATGTTCTGAGATTCACTAAGGCAGAGGATAAAAAAATGATCCTTTGCGGAGGTCTGTGGTTTTTTGGCCGTTCTCTCTTCGTGCTGGCCGAATACGACGGCCTCCATGACGTTGATGTTGTTCCAATTGTCTCCTTCCCCGTCTGGGTGGAGATCATGGGACTCCCACCGCATATGTTCACTGATGATGAGGCCACTAAGAAGGTTGGCTTAACCCTAGCCCCAAAGGTGCAAGTCGACAAGTTAGGGGTGAAGCATGTTATACACGTTAGCGTTAGGGCATCACATCGTTTGTGTGACCCGATCCTGGAGGCATTCCCGAATGTCCCTTTCAAATTCAGATCTCAACGCTTCCTGGTGAATCTGCAATTCAACTACGATCAGATGGTCTACGAGATTGTGGAATGCTGGAGCACCCGGCTTCGGGTTGTGAGGGTCCTCCTGTTTTGCAGCCTCGCTTCATCGAGATTGAATCCATGGACTCCATTTGGATTCGGTGGTTCAGCTAGGGTTTTGGGTGTCACAAACCCTAACCCTAAATCGGGTTTGCCTACAGTTGGGGTTCAATCCGGGTGTTTTGCACGGACACTCCACATGAGTGAAGTGTCGGAGTGTCTGACACGCGCCCGACACGGCAAAATCCGTGTCCAACATGCCACGTGGAGTTTCACCGATTCGAAGAAAATGTCCACCACCCATTCTCTTCTCTTCACCGTCCGCCACCCATTCGATCTCTTCTCCTTGTCGTCTGCCGTCGCCGTCGTCGTCGTTGCTATGGTTAGTCTTCCTTTCCTTAATCTCTCCCCATTATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

348

Amino Acids

38.68

Weight (kDa)

9.41

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 38 - 109 7.7e-08 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 465, 618
AccII CGCG 1 cut(s) 852
AciI CCGC 5 cut(s) 89, 95, 276, 398, 946
AclWI GGATC 4 cut(s) 143, 195, 262, 526
AcoI YGGCCR 3 cut(s) 39, 295, 315
AcsI RAATTY 1 cut(s) 563
AcvI CACGTG 1 cut(s) 888
AfaI GTAC 1 cut(s) 169
AfiI CCNNNNNNNGG 9 cut(s) 68, 183, 373, 535, 651, 652, 769, 770, 785
AflIII ACRYGT 2 cut(s) 100, 493
AgsI TTSAA 4 cut(s) 562, 601, 700, 794
AjnI CCWGG 2 cut(s) 534, 582
AleI CACNNNNGTG 1 cut(s) 825
AluBI AGCT 1 cut(s) 734
AluI AGCT 1 cut(s) 734
Alw21I GWGCWC 2 cut(s) 217, 644
Alw26I GTCTC 1 cut(s) 364
AlwI GGATC 4 cut(s) 143, 195, 262, 526
Ama87I CYCGRG 1 cut(s) 78
AoxI GGCC 5 cut(s) 39, 295, 315, 328, 420
ApeKI GCWGC 2 cut(s) 86, 678
ApoI RAATTY 1 cut(s) 563
ArsI GACNNNNNNTTYG 4 cut(s) 858, 890, 899, 931
AspLEI GCGC 1 cut(s) 854
AspS9I GGNCC 1 cut(s) 664
AsuC2I CCSGG 2 cut(s) 646, 799
AsuHPI GGTGA 5 cut(s) 166, 490, 598, 889, 931
AsuII TTCGAA 1 cut(s) 905
AvaI CYCGRG 1 cut(s) 78
AvaII GGWCC 1 cut(s) 664
BalI TGGCCA 1 cut(s) 41
BauI CACGAG 1 cut(s) 153
BbrPI CACGTG 1 cut(s) 888
BbsI GAAGAC 1 cut(s) 1004
Bbv12I GWGCWC 2 cut(s) 217, 644
BbvI GCAGC 2 cut(s) 98, 690
BccI CCATC 2 cut(s) 50, 607
BceAI ACGGC 5 cut(s) 282, 343, 877, 965, 971
BciT130I CCWGG 2 cut(s) 536, 584
BcnI CCSGG 2 cut(s) 646, 799
BcoDI GTCTC 1 cut(s) 364
BfaI CTAG 2 cut(s) 446, 735
BfmI CTRYAG 1 cut(s) 780
BglII AGATCT 1 cut(s) 569
BisI GCNGC 3 cut(s) 87, 90, 679
BlsI GCNGC 3 cut(s) 88, 91, 680
Bme1390I CCNGG 4 cut(s) 536, 584, 646, 799
Bme18I GGWCC 1 cut(s) 664
BmeT110I CYCGRG 1 cut(s) 78
BmgT120I GGNCC 1 cut(s) 664
BmiI GGNNCC 2 cut(s) 93, 665
BmrFI CCNGG 4 cut(s) 536, 584, 646, 799
BmsI GCATC 2 cut(s) 22, 518
BpiI GAAGAC 1 cut(s) 1004
BpmI CTGGAG 3 cut(s) 188, 557, 658
Bpu14I TTCGAA 1 cut(s) 905
BpuMI CCSGG 2 cut(s) 646, 799
BsaAI YACGTR 1 cut(s) 888
BsaJI CCNNGG 1 cut(s) 704
BsaXI ACNNNNNCTCC 2 cut(s) 801, 831
Bsc4I CCNNNNNNNGG 9 cut(s) 68, 183, 373, 535, 651, 652, 769, 770, 785
BseBI CCWGG 2 cut(s) 536, 584
BseDI CCNNGG 1 cut(s) 704
BseLI CCNNNNNNNGG 9 cut(s) 68, 183, 373, 535, 651, 652, 769, 770, 785
BseMII CTCAG 1 cut(s) 227
BseXI GCAGC 2 cut(s) 98, 690
Bsh1236I CGCG 1 cut(s) 852
BshFI GGCC 5 cut(s) 41, 297, 317, 330, 422
BsiHKAI GWGCWC 2 cut(s) 217, 644
BsiHKCI CYCGRG 1 cut(s) 78
BsiSI CCGG 2 cut(s) 646, 798
BslFI GGGAC 3 cut(s) 68, 402, 539
BslI CCNNNNNNNGG 9 cut(s) 68, 183, 373, 535, 651, 652, 769, 770, 785
BsmAI GTCTC 1 cut(s) 364
BsmFI GGGAC 3 cut(s) 68, 402, 539
BsmI GAATGC 2 cut(s) 542, 638
BsnI GGCC 5 cut(s) 41, 297, 317, 330, 422
BsoBI CYCGRG 1 cut(s) 78
Bsp119I TTCGAA 1 cut(s) 905
Bsp1286I GDGCHC 2 cut(s) 217, 644
Bsp143I GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
Bsp19I CCATGG 1 cut(s) 704
BspACI CCGC 5 cut(s) 89, 95, 276, 398, 946
BspANI GGCC 5 cut(s) 41, 297, 317, 330, 422
BspCNI CTCAG 1 cut(s) 228
BspFNI CGCG 1 cut(s) 852
BspLI GGNNCC 2 cut(s) 93, 665
BspPI GGATC 4 cut(s) 143, 195, 262, 526
BspT104I TTCGAA 1 cut(s) 905
BssECI CCNNGG 1 cut(s) 704
BssMI GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
BssSI CACGAG 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 704
Bst2BI CACGAG 1 cut(s) 153
Bst2UI CCWGG 2 cut(s) 536, 584
Bst4CI ACNGT 2 cut(s) 784, 943
Bst6I CTCTTC 4 cut(s) 311, 936, 941, 968
BstBAI YACGTR 1 cut(s) 888
BstBI TTCGAA 1 cut(s) 905
BstC8I GCNNGC 2 cut(s) 160, 315
BstDEI CTNAG 3 cut(s) 236, 246, 426
BstDSI CCRYGG 1 cut(s) 704
BstFNI CGCG 1 cut(s) 852
BstHHI GCGC 1 cut(s) 854
BstKTI GATC 8 cut(s) 151, 190, 270, 384, 534, 572, 610, 961
BstMAI GTCTC 1 cut(s) 364
BstMBI GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstNI CCWGG 2 cut(s) 536, 584
BstNSI RCATGY 3 cut(s) 104, 488, 884
BstSCI CCNGG 4 cut(s) 534, 582, 644, 797
BstSFI CTRYAG 1 cut(s) 780
BstUI CGCG 1 cut(s) 852
BstV1I GCAGC 2 cut(s) 98, 690
BstV2I GAAGAC 1 cut(s) 1004
BstX2I RGATCY 3 cut(s) 148, 187, 569
BstYI RGATCY 3 cut(s) 148, 187, 569
BsuRI GGCC 5 cut(s) 41, 297, 317, 330, 422
BtgI CCRYGG 1 cut(s) 704
BtsIMutI CAGTG 1 cut(s) 408
Cac8I GCNNGC 2 cut(s) 160, 315
CfoI GCGC 1 cut(s) 854
Cfr13I GGNCC 1 cut(s) 664
Csp6I GTAC 1 cut(s) 168
CviAII CATG 8 cut(s) 101, 218, 335, 385, 485, 705, 823, 881
CviQI GTAC 1 cut(s) 168
DdeI CTNAG 3 cut(s) 236, 246, 426
DpnI GATC 8 cut(s) 150, 189, 269, 383, 533, 571, 609, 960
DpnII GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
EaeI YGGCCR 3 cut(s) 39, 295, 315
Eam1104I CTCTTC 4 cut(s) 311, 936, 941, 968
EarI CTCTTC 4 cut(s) 311, 936, 941, 968
EciI GGCGGA 2 cut(s) 84, 935
Eco130I CCWWGG 1 cut(s) 704
Eco47I GGWCC 1 cut(s) 664
Eco72I CACGTG 1 cut(s) 888
Eco88I CYCGRG 1 cut(s) 78
EcoO109I RGGNCCY 1 cut(s) 664
EcoRII CCWGG 2 cut(s) 534, 582
EcoT14I CCWWGG 1 cut(s) 704
ErhI CCWWGG 1 cut(s) 704
FaeI CATG 8 cut(s) 104, 221, 338, 388, 488, 708, 826, 884
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FaqI GGGAC 3 cut(s) 68, 402, 539
FatI CATG 8 cut(s) 100, 217, 334, 384, 484, 704, 822, 880
FauNDI CATATG 1 cut(s) 402
FblI GTMKAC 2 cut(s) 465, 618
Fnu4HI GCNGC 3 cut(s) 87, 90, 679
Fsp4HI GCNGC 3 cut(s) 87, 90, 679
FspBI CTAG 2 cut(s) 446, 735
GlaI GCGC 1 cut(s) 853
GluI GCNGC 3 cut(s) 87, 90, 679
GsuI CTGGAG 3 cut(s) 188, 557, 658
HaeIII GGCC 5 cut(s) 41, 297, 317, 330, 422
HapII CCGG 2 cut(s) 646, 798
HhaI GCGC 1 cut(s) 854
Hin1II CATG 8 cut(s) 104, 221, 338, 388, 488, 708, 826, 884
Hin6I GCGC 1 cut(s) 852
HinP1I GCGC 1 cut(s) 852
HincII GTYRAC 1 cut(s) 466
HindII GTYRAC 1 cut(s) 466
HinfI GANTC 8 cut(s) 201, 240, 390, 589, 700, 709, 720, 902
HpaII CCGG 2 cut(s) 646, 798
HphI GGTGA 5 cut(s) 166, 490, 598, 889, 931
Hpy166II GTNNAC 6 cut(s) 143, 170, 408, 466, 619, 918
Hpy188I TCNGA 6 cut(s) 7, 237, 569, 612, 838, 846
Hpy188III TCNNGA 4 cut(s) 115, 205, 547, 693
Hpy8I GTNNAC 6 cut(s) 143, 170, 408, 466, 619, 918
Hpy99I CGWCG 6 cut(s) 141, 329, 986, 992, 995, 998
HpyAV CCTTC 2 cut(s) 373, 424
HpyCH4III ACNGT 2 cut(s) 784, 943
HpyCH4IV ACGT 3 cut(s) 339, 495, 887
HpyCH4V TGCA 6 cut(s) 86, 110, 460, 595, 678, 809
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
HpyF3I CTNAG 3 cut(s) 236, 246, 426
HpySE526I ACGT 3 cut(s) 339, 495, 887
Hsp92II CATG 8 cut(s) 104, 221, 338, 388, 488, 708, 826, 884
HspAI GCGC 1 cut(s) 852
Kzo9I GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
LmnI GCTCC 2 cut(s) 97, 639
Lsp1109I GCAGC 2 cut(s) 98, 690
LweI GCATC 2 cut(s) 22, 518
MaeI CTAG 2 cut(s) 446, 735
MaeII ACGT 3 cut(s) 339, 495, 887
MaeIII GTNAC 2 cut(s) 524, 748
MalI GATC 8 cut(s) 150, 189, 269, 383, 533, 571, 609, 960
MboI GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
MboII GAAGA 6 cut(s) 298, 919, 923, 928, 955, 1004
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 3 cut(s) 148, 187, 569
MhlI GDGCHC 2 cut(s) 217, 644
MlsI TGGCCA 1 cut(s) 41
MluCI AATT 4 cut(s) 19, 354, 563, 596
MluNI TGGCCA 1 cut(s) 41
MlyI GAGTC 3 cut(s) 195, 384, 703
MmeI TCCRAC 2 cut(s) 816, 901
Mox20I TGGCCA 1 cut(s) 41
MscI TGGCCA 1 cut(s) 41
MseI TTAA 3 cut(s) 440, 1023, 1042
MslI CAYNNNNRTG 1 cut(s) 825
Msp20I TGGCCA 1 cut(s) 41
MspA1I CMGCKG 1 cut(s) 89
MspI CCGG 2 cut(s) 646, 798
MspR9I CCNGG 4 cut(s) 536, 584, 646, 799
MunI CAATTG 1 cut(s) 354
Mva1269I GAATGC 2 cut(s) 542, 638
MvaI CCWGG 2 cut(s) 536, 584
MvnI CGCG 1 cut(s) 852
MwoI GCNNNNNNNGC 1 cut(s) 83
NciI CCSGG 2 cut(s) 646, 799
NcoI CCATGG 1 cut(s) 704
NdeI CATATG 1 cut(s) 402
NdeII GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
NlaIII CATG 8 cut(s) 104, 221, 338, 388, 488, 708, 826, 884
NlaIV GGNNCC 2 cut(s) 93, 665
NmuCI GTSAC 2 cut(s) 524, 748
NspI RCATGY 3 cut(s) 104, 488, 884
NspV TTCGAA 1 cut(s) 905
OliI CACNNNNGTG 1 cut(s) 825
PaeR7I CTCGAG 1 cut(s) 78
PciI ACATGT 1 cut(s) 100
PcsI WCGNNNNNNNCGW 2 cut(s) 315, 990
PctI GAATGC 2 cut(s) 542, 638
PfeI GAWTC 5 cut(s) 240, 589, 700, 720, 902
PfoI TCCNGGA 1 cut(s) 534
PkrI GCNGC 3 cut(s) 88, 91, 680
PleI GAGTC 3 cut(s) 195, 384, 703
PmaCI CACGTG 1 cut(s) 888
PmlI CACGTG 1 cut(s) 888
PpsI GAGTC 3 cut(s) 195, 384, 703
Ppu21I YACGTR 1 cut(s) 888
PpuMI RGGWCCY 1 cut(s) 664
PscI ACATGT 1 cut(s) 100
Psp5II RGGWCCY 1 cut(s) 664
Psp6I CCWGG 2 cut(s) 534, 582
PspCI CACGTG 1 cut(s) 888
PspGI CCWGG 2 cut(s) 534, 582
PspN4I GGNNCC 2 cut(s) 93, 665
PspPI GGNCC 1 cut(s) 664
PspPPI RGGWCCY 1 cut(s) 664
PspXI VCTCGAGB 1 cut(s) 78
PsuI RGATCY 3 cut(s) 148, 187, 569
RsaI GTAC 1 cut(s) 169
RsaNI GTAC 1 cut(s) 168
RseI CAYNNNNRTG 1 cut(s) 825
SalI GTCGAC 1 cut(s) 464
SaqAI TTAA 3 cut(s) 440, 1023, 1042
SatI GCNGC 3 cut(s) 87, 90, 679
Sau3AI GATC 8 cut(s) 148, 187, 267, 381, 531, 569, 607, 958
Sau96I GGNCC 1 cut(s) 664
SchI GAGTC 3 cut(s) 195, 384, 703
ScrFI CCNGG 4 cut(s) 536, 584, 646, 799
SduI GDGCHC 2 cut(s) 217, 644
SetI ASST 9 cut(s) 64, 179, 283, 342, 435, 459, 498, 736, 890
SfaNI GCATC 2 cut(s) 22, 518
SfcI CTRYAG 1 cut(s) 780
Sfr274I CTCGAG 1 cut(s) 78
SfuI TTCGAA 1 cut(s) 905
SinI GGWCC 1 cut(s) 664
SlaI CTCGAG 1 cut(s) 78
SmiMI CAYNNNNRTG 1 cut(s) 825
SmlI CTYRAG 1 cut(s) 78
SmoI CTYRAG 1 cut(s) 78
Sse9I AATT 4 cut(s) 19, 354, 563, 596
SsiI CCGC 5 cut(s) 89, 95, 276, 398, 946
SspMI CTAG 2 cut(s) 446, 735
StyD4I CCNGG 4 cut(s) 534, 582, 644, 797
StyI CCWWGG 1 cut(s) 704
TaaI ACNGT 2 cut(s) 784, 943
TaiI ACGT 3 cut(s) 342, 498, 890
TaqI TCGA 5 cut(s) 79, 465, 692, 905, 957
TasI AATT 4 cut(s) 19, 354, 563, 596
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 5 cut(s) 240, 589, 700, 720, 902
Tru1I TTAA 3 cut(s) 440, 1023, 1042
Tru9I TTAA 3 cut(s) 440, 1023, 1042
TscAI CASTG 1 cut(s) 415
TseFI GTSAC 2 cut(s) 524, 748
TseI GCWGC 2 cut(s) 86, 678
Tsp45I GTSAC 2 cut(s) 524, 748
TspDTI ATGAA 2 cut(s) 24, 678
TspGWI ACGGA 3 cut(s) 169, 826, 860
TspRI CASTG 1 cut(s) 415
VpaK11BI GGWCC 1 cut(s) 664
XapI RAATTY 1 cut(s) 563
XceI RCATGY 3 cut(s) 104, 488, 884
XhoI CTCGAG 1 cut(s) 78
XmiI GTMKAC 2 cut(s) 465, 618
XspI CTAG 2 cut(s) 446, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.