C1 domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 824 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 385 |
| AccB1I | GGYRCC | 1 cut(s) | 373 |
| AciI | CCGC | 2 cut(s) | 467, 536 |
| AclWI | GGATC | 2 cut(s) | 971, 984 |
| AcoI | YGGCCR | 1 cut(s) | 690 |
| AfaI | GTAC | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 939 |
| AflIII | ACRYGT | 1 cut(s) | 542 |
| AgsI | TTSAA | 3 cut(s) | 344, 771, 902 |
| AjiI | CACGTC | 1 cut(s) | 158 |
| AjnI | CCWGG | 1 cut(s) | 979 |
| AluBI | AGCT | 3 cut(s) | 29, 347, 815 |
| AluI | AGCT | 3 cut(s) | 29, 347, 815 |
| Alw21I | GWGCWC | 1 cut(s) | 667 |
| Alw26I | GTCTC | 3 cut(s) | 28, 323, 355 |
| AlwI | GGATC | 2 cut(s) | 971, 984 |
| AoxI | GGCC | 1 cut(s) | 690 |
| ApeKI | GCWGC | 2 cut(s) | 258, 524 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 263, 295 |
| AspA2I | CCTAGG | 1 cut(s) | 455 |
| AspLEI | GCGC | 1 cut(s) | 46 |
| AspS9I | GGNCC | 1 cut(s) | 209 |
| AsuC2I | CCSGG | 1 cut(s) | 669 |
| AsuHPI | GGTGA | 1 cut(s) | 683 |
| AvaII | GGWCC | 1 cut(s) | 209 |
| AvrII | CCTAGG | 1 cut(s) | 455 |
| AxyI | CCTNAGG | 1 cut(s) | 519 |
| BaeGI | GKGCMC | 1 cut(s) | 415 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 825, 858 |
| BamHI | GGATCC | 1 cut(s) | 976 |
| BanI | GGYRCC | 1 cut(s) | 373 |
| BauI | CACGAG | 1 cut(s) | 471 |
| Bbv12I | GWGCWC | 1 cut(s) | 667 |
| BbvI | GCAGC | 2 cut(s) | 245, 511 |
| BccI | CCATC | 4 cut(s) | 4, 580, 832, 883 |
| BceAI | ACGGC | 1 cut(s) | 271 |
| BciT130I | CCWGG | 1 cut(s) | 981 |
| BclI | TGATCA | 1 cut(s) | 336 |
| BcnI | CCSGG | 1 cut(s) | 669 |
| BcoDI | GTCTC | 3 cut(s) | 28, 323, 355 |
| BfaI | CTAG | 2 cut(s) | 456, 729 |
| BglII | AGATCT | 1 cut(s) | 195 |
| BisI | GCNGC | 2 cut(s) | 259, 525 |
| BlnI | CCTAGG | 1 cut(s) | 455 |
| BlsI | GCNGC | 2 cut(s) | 260, 526 |
| Bme1390I | CCNGG | 2 cut(s) | 669, 981 |
| Bme18I | GGWCC | 1 cut(s) | 209 |
| BmgBI | CACGTC | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 209 |
| BmiI | GGNNCC | 4 cut(s) | 375, 591, 852, 978 |
| BmrFI | CCNGG | 2 cut(s) | 669, 981 |
| BmrI | ACTGGG | 1 cut(s) | 417 |
| BmsI | GCATC | 3 cut(s) | 504, 608, 976 |
| BmuI | ACTGGG | 1 cut(s) | 417 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 8, 40 |
| BpuMI | CCSGG | 1 cut(s) | 669 |
| BsaBI | GATNNNNATC | 1 cut(s) | 296 |
| BsaI | GGTCTC | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 4 cut(s) | 212, 455, 749, 980 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 939 |
| Bse118I | RCCGGY | 1 cut(s) | 688 |
| Bse1I | ACTGG | 1 cut(s) | 412 |
| Bse21I | CCTNAGG | 1 cut(s) | 519 |
| Bse8I | GATNNNNATC | 1 cut(s) | 296 |
| BseBI | CCWGG | 1 cut(s) | 981 |
| BseDI | CCNNGG | 4 cut(s) | 212, 455, 749, 980 |
| BseGI | GGATG | 1 cut(s) | 991 |
| BseJI | GATNNNNATC | 1 cut(s) | 296 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 939 |
| BseMII | CTCAG | 3 cut(s) | 39, 533, 897 |
| BseNI | ACTGG | 1 cut(s) | 412 |
| BseRI | GAGGAG | 4 cut(s) | 32, 668, 752, 941 |
| BseSI | GKGCMC | 1 cut(s) | 415 |
| BseXI | GCAGC | 2 cut(s) | 245, 511 |
| BshFI | GGCC | 1 cut(s) | 692 |
| BshNI | GGYRCC | 1 cut(s) | 373 |
| BsiHKAI | GWGCWC | 1 cut(s) | 667 |
| BsiSI | CCGG | 2 cut(s) | 669, 689 |
| BslFI | GGGAC | 1 cut(s) | 775 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 939 |
| BsmAI | GTCTC | 3 cut(s) | 28, 323, 355 |
| BsmFI | GGGAC | 1 cut(s) | 775 |
| BsnI | GGCC | 1 cut(s) | 692 |
| Bso31I | GGTCTC | 1 cut(s) | 28 |
| Bsp1286I | GDGCHC | 2 cut(s) | 415, 667 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| BspACI | CCGC | 2 cut(s) | 467, 536 |
| BspANI | GGCC | 1 cut(s) | 692 |
| BspCNI | CTCAG | 3 cut(s) | 38, 532, 898 |
| BspHI | TCATGA | 1 cut(s) | 402 |
| BspLI | GGNNCC | 4 cut(s) | 375, 591, 852, 978 |
| BspPI | GGATC | 2 cut(s) | 971, 984 |
| BspT107I | GGYRCC | 1 cut(s) | 373 |
| BspTNI | GGTCTC | 1 cut(s) | 28 |
| BsrFI | RCCGGY | 1 cut(s) | 688 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 1 cut(s) | 412 |
| BssAI | RCCGGY | 1 cut(s) | 688 |
| BssECI | CCNNGG | 4 cut(s) | 212, 455, 749, 980 |
| BssMI | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| BssSI | CACGAG | 1 cut(s) | 471 |
| BssT1I | CCWWGG | 2 cut(s) | 455, 749 |
| Bst2BI | CACGAG | 1 cut(s) | 471 |
| Bst2UI | CCWGG | 1 cut(s) | 981 |
| Bst4CI | ACNGT | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 1 cut(s) | 61 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 3 cut(s) | 88, 237, 690 |
| BstDEI | CTNAG | 5 cut(s) | 25, 519, 774, 807, 906 |
| BstDSI | CCRYGG | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 991 |
| BstHHI | GCGC | 1 cut(s) | 46 |
| BstKTI | GATC | 8 cut(s) | 102, 198, 294, 300, 339, 656, 676, 979 |
| BstMAI | GTCTC | 3 cut(s) | 28, 323, 355 |
| BstMBI | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 35, 176, 812, 995 |
| BstNI | CCWGG | 1 cut(s) | 981 |
| BstNSI | RCATGY | 3 cut(s) | 422, 546, 556 |
| BstSCI | CCNGG | 2 cut(s) | 667, 979 |
| BstSLI | GKGCMC | 1 cut(s) | 415 |
| BstV1I | GCAGC | 2 cut(s) | 245, 511 |
| BstX2I | RGATCY | 2 cut(s) | 195, 976 |
| BstYI | RGATCY | 2 cut(s) | 195, 976 |
| Bsu36I | CCTNAGG | 1 cut(s) | 519 |
| BsuRI | GGCC | 1 cut(s) | 692 |
| BtgI | CCRYGG | 1 cut(s) | 212 |
| BtgZI | GCGATG | 1 cut(s) | 558 |
| BtrI | CACGTC | 1 cut(s) | 158 |
| BtsCI | GGATG | 1 cut(s) | 991 |
| Cac8I | GCNNGC | 3 cut(s) | 88, 237, 690 |
| CciI | TCATGA | 1 cut(s) | 402 |
| CfoI | GCGC | 1 cut(s) | 46 |
| Cfr10I | RCCGGY | 1 cut(s) | 688 |
| Cfr13I | GGNCC | 1 cut(s) | 209 |
| Csp6I | GTAC | 1 cut(s) | 4 |
| CviQI | GTAC | 1 cut(s) | 4 |
| DdeI | CTNAG | 5 cut(s) | 25, 519, 774, 807, 906 |
| DpnI | GATC | 8 cut(s) | 101, 197, 293, 299, 338, 655, 675, 978 |
| DpnII | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 385 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 385 |
| EaeI | YGGCCR | 1 cut(s) | 690 |
| Eam1104I | CTCTTC | 1 cut(s) | 61 |
| EarI | CTCTTC | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 2 cut(s) | 455, 749 |
| Eco31I | GGTCTC | 1 cut(s) | 28 |
| Eco32I | GATATC | 1 cut(s) | 624 |
| Eco47I | GGWCC | 1 cut(s) | 209 |
| Eco81I | CCTNAGG | 1 cut(s) | 519 |
| EcoRII | CCWGG | 1 cut(s) | 979 |
| EcoRV | GATATC | 1 cut(s) | 624 |
| EcoT14I | CCWWGG | 2 cut(s) | 455, 749 |
| ErhI | CCWWGG | 2 cut(s) | 455, 749 |
| FaqI | GGGAC | 1 cut(s) | 775 |
| FauI | CCCGC | 1 cut(s) | 474 |
| FbaI | TGATCA | 1 cut(s) | 336 |
| Fnu4HI | GCNGC | 2 cut(s) | 259, 525 |
| FokI | GGATG | 1 cut(s) | 998 |
| Fsp4HI | GCNGC | 2 cut(s) | 259, 525 |
| FspBI | CTAG | 2 cut(s) | 456, 729 |
| GlaI | GCGC | 1 cut(s) | 45 |
| GluI | GCNGC | 2 cut(s) | 259, 525 |
| HaeIII | GGCC | 1 cut(s) | 692 |
| HapII | CCGG | 2 cut(s) | 669, 689 |
| HhaI | GCGC | 1 cut(s) | 46 |
| Hin6I | GCGC | 1 cut(s) | 44 |
| HinP1I | GCGC | 1 cut(s) | 44 |
| HindIII | AAGCTT | 1 cut(s) | 813 |
| HinfI | GANTC | 3 cut(s) | 152, 902, 929 |
| HpaII | CCGG | 2 cut(s) | 669, 689 |
| HphI | GGTGA | 1 cut(s) | 683 |
| Hpy166II | GTNNAC | 1 cut(s) | 951 |
| Hpy188I | TCNGA | 3 cut(s) | 206, 888, 907 |
| Hpy188III | TCNNGA | 3 cut(s) | 295, 390, 403 |
| Hpy8I | GTNNAC | 1 cut(s) | 951 |
| HpyAV | CCTTC | 3 cut(s) | 588, 603, 856 |
| HpyCH4III | ACNGT | 1 cut(s) | 213 |
| HpyCH4IV | ACGT | 1 cut(s) | 157 |
| HpyCH4V | TGCA | 3 cut(s) | 119, 599, 716 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 35, 176, 812, 995 |
| HpyF3I | CTNAG | 5 cut(s) | 25, 519, 774, 807, 906 |
| HpySE526I | ACGT | 1 cut(s) | 157 |
| HspAI | GCGC | 1 cut(s) | 44 |
| KroI | GCCGGC | 1 cut(s) | 688 |
| KroNI | GCCGGC | 1 cut(s) | 690 |
| Ksp22I | TGATCA | 1 cut(s) | 336 |
| Kzo9I | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| LmnI | GCTCC | 2 cut(s) | 670, 856 |
| Lsp1109I | GCAGC | 2 cut(s) | 245, 511 |
| LweI | GCATC | 3 cut(s) | 504, 608, 976 |
| MaeI | CTAG | 2 cut(s) | 456, 729 |
| MaeII | ACGT | 1 cut(s) | 157 |
| MaeIII | GTNAC | 1 cut(s) | 135 |
| MalI | GATC | 8 cut(s) | 101, 197, 293, 299, 338, 655, 675, 978 |
| MboI | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| MboII | GAAGA | 4 cut(s) | 78, 154, 842, 889 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MflI | RGATCY | 2 cut(s) | 195, 976 |
| MhlI | GDGCHC | 2 cut(s) | 415, 667 |
| MluCI | AATT | 3 cut(s) | 120, 636, 969 |
| MlyI | GAGTC | 1 cut(s) | 938 |
| MroNI | GCCGGC | 1 cut(s) | 688 |
| MseI | TTAA | 1 cut(s) | 783 |
| MslI | CAYNNNNRTG | 2 cut(s) | 11, 114 |
| MspI | CCGG | 2 cut(s) | 669, 689 |
| MspR9I | CCNGG | 2 cut(s) | 669, 981 |
| MunI | CAATTG | 1 cut(s) | 120 |
| MvaI | CCWGG | 1 cut(s) | 981 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 35, 176, 812, 995 |
| NaeI | GCCGGC | 1 cut(s) | 690 |
| NciI | CCSGG | 1 cut(s) | 669 |
| NdeII | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| NgoMIV | GCCGGC | 1 cut(s) | 688 |
| NlaIV | GGNNCC | 4 cut(s) | 375, 591, 852, 978 |
| NmeAIII | GCCGAG | 1 cut(s) | 451 |
| NmuCI | GTSAC | 1 cut(s) | 135 |
| NspI | RCATGY | 3 cut(s) | 422, 546, 556 |
| PagI | TCATGA | 1 cut(s) | 402 |
| PciI | ACATGT | 1 cut(s) | 542 |
| PdiI | GCCGGC | 1 cut(s) | 690 |
| PfeI | GAWTC | 2 cut(s) | 152, 902 |
| PkrI | GCNGC | 2 cut(s) | 260, 526 |
| PleI | GAGTC | 1 cut(s) | 937 |
| PpsI | GAGTC | 1 cut(s) | 937 |
| PscI | ACATGT | 1 cut(s) | 542 |
| PsiI | TTATAA | 1 cut(s) | 824 |
| Psp6I | CCWGG | 1 cut(s) | 979 |
| PspGI | CCWGG | 1 cut(s) | 979 |
| PspN4I | GGNNCC | 4 cut(s) | 375, 591, 852, 978 |
| PspPI | GGNCC | 1 cut(s) | 209 |
| PsuI | RGATCY | 2 cut(s) | 195, 976 |
| RsaI | GTAC | 1 cut(s) | 5 |
| RsaNI | GTAC | 1 cut(s) | 4 |
| RseI | CAYNNNNRTG | 2 cut(s) | 11, 114 |
| SaqAI | TTAA | 1 cut(s) | 783 |
| SatI | GCNGC | 2 cut(s) | 259, 525 |
| Sau3AI | GATC | 8 cut(s) | 99, 195, 291, 297, 336, 653, 673, 976 |
| Sau96I | GGNCC | 1 cut(s) | 209 |
| SchI | GAGTC | 1 cut(s) | 938 |
| ScrFI | CCNGG | 2 cut(s) | 669, 981 |
| SduI | GDGCHC | 2 cut(s) | 415, 667 |
| SetI | ASST | 8 cut(s) | 24, 31, 160, 349, 402, 441, 461, 817 |
| SfaNI | GCATC | 3 cut(s) | 504, 608, 976 |
| SinI | GGWCC | 1 cut(s) | 209 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 11, 114 |
| Sse9I | AATT | 3 cut(s) | 120, 636, 969 |
| SsiI | CCGC | 2 cut(s) | 467, 536 |
| SspMI | CTAG | 2 cut(s) | 456, 729 |
| StyD4I | CCNGG | 2 cut(s) | 667, 979 |
| StyI | CCWWGG | 2 cut(s) | 455, 749 |
| TaaI | ACNGT | 1 cut(s) | 213 |
| TaiI | ACGT | 1 cut(s) | 160 |
| TaqI | TCGA | 3 cut(s) | 296, 500, 652 |
| TasI | AATT | 3 cut(s) | 120, 636, 969 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TfiI | GAWTC | 2 cut(s) | 152, 902 |
| Tru1I | TTAA | 1 cut(s) | 783 |
| Tru9I | TTAA | 1 cut(s) | 783 |
| TseFI | GTSAC | 1 cut(s) | 135 |
| TseI | GCWGC | 2 cut(s) | 258, 524 |
| Tsp45I | GTSAC | 1 cut(s) | 135 |
| TspDTI | ATGAA | 3 cut(s) | 154, 198, 788 |
| TspGWI | ACGGA | 3 cut(s) | 220, 410, 922 |
| VpaK11BI | GGWCC | 1 cut(s) | 209 |
| XceI | RCATGY | 3 cut(s) | 422, 546, 556 |
| XmaJI | CCTAGG | 1 cut(s) | 455 |
| XspI | CTAG | 2 cut(s) | 456, 729 |