FvH4_2g07601

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000109
Physical Location & Seq
Reverse (-)
6475448 .. 6476897
1450 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g07601.t1

Sequence Viewer

Length: 1101 bp
ATGGTTGACGAAGTTTCCCGGCTTGTGGTGGTGATGGCAATCTCAAAGAACAGGAGGGTCTCGTTCGGAGCTACCGGAGTAGCGGCTTTTTCAGGCCATTCTAATGCAGTAGAGAGGCTCCTCTCTCCGAAGAAGAAGGTGGAGCCTAGGGCTTTCATGGCAACGACGGGTTCCATCTGGGGTTTGCGAAATCGGCTCACCATCCGGCCACAAGGTGAGCGGTATATTCTTCAGTTCACGGAGGAGGTAGATAGGAAGGACATGATTGAGAGTAGGTCATGGTTTTATAGGAAAACGGTTTTTGCACTGGTAGAATATGATGGTCGTTCTGATGCGGTGGTAGTCCCAATCGTCTCTGTTCCGGTATGGGTTGAAGTTTTTGGACTCCCACCGGATCTGATGACTAAGAAGGCGTTCTACATGGTGGGTTCAACGCTTGGACGGATTATCACTCATGATAACCCTGGGCTGCTCAATGGTTCCAGGGCTAGGGTTCGAATTGAACATCAGATTTCTGATCCGGTGAAGCAGGCGTTCCCTCCCATGCGGTTGAGTTTGGCGAAGGCCGGCGGGTGTCAAGGTCCTCCTAACATGTCTGTGGCGGCCGGGGAACAAGGAACTGGAATTAGGGCTAACCCTAACCCGAACCCTAACAGCAGCTCATCTATTGTTAACCCGTTTCCTACTTTGGGTTTTGTCTTGTCCATGCCGGCCAAGTCTCCGACACCTACATTGACTAGGAAAAAGCGGTCTGCAACGTCTTTGATGCTTGAGGATTACGAGGGAAGAGCCAAGTCTCCGACGCTTGCATTGACTGGGAAAAACCAGTCTACAACGTCCTTGATGCTTGAGGATTACGGTAAGCACCAGAAAGGCACGGCGGCAGTTGGGGCGGATGAGCACTCTACGCTCGTTGGAGGCAAAGGCACATACCAAGAGCTCAAAGTCCAAGAAGAGGTCCTTTGGTTCTGCAAAATGACTATGAACTTGGGAGAGGAGGATTCAGTTATTAGCACTATACCGGAGGACTCGATTGGTACTGCACCGGTGGATATGGCGGTGGAGGCAGCTGAAGACGCCAGAGCTACTCCCTCTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

367

Amino Acids

39.8

Weight (kDa)

9.08

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 220
AccI GTMKAC 1 cut(s) 830
AclWI GGATC 2 cut(s) 402, 512
AcoI YGGCCR 3 cut(s) 206, 603, 711
AcuI CTGAAG 2 cut(s) 215, 1092
AcyI GRCGYC 1 cut(s) 1077
AdeI CACNNNGTG 1 cut(s) 215
AfaI GTAC 1 cut(s) 1039
AfiI CCNNNNNNNGG 4 cut(s) 25, 489, 689, 955
AflIII ACRYGT 1 cut(s) 591
AgeI ACCGGT 1 cut(s) 1045
AgsI TTSAA 3 cut(s) 374, 432, 503
AjnI CCWGG 2 cut(s) 463, 482
AluBI AGCT 5 cut(s) 71, 660, 940, 1070, 1085
AluI AGCT 5 cut(s) 71, 660, 940, 1070, 1085
Alw21I GWGCWC 2 cut(s) 903, 942
Alw26I GTCTC 4 cut(s) 64, 358, 723, 801
AlwI GGATC 2 cut(s) 402, 512
AoxI GGCC 5 cut(s) 94, 206, 564, 603, 711
ApeKI GCWGC 3 cut(s) 469, 657, 1067
AsiGI ACCGGT 1 cut(s) 1045
Asp700I GAANNNNTTC 1 cut(s) 413
AspA2I CCTAGG 1 cut(s) 146
AspS9I GGNCC 2 cut(s) 581, 958
AsuC2I CCSGG 2 cut(s) 19, 607
AsuHPI GGTGA 4 cut(s) 43, 190, 227, 535
AsuII TTCGAA 1 cut(s) 496
AvaII GGWCC 2 cut(s) 581, 958
AvrII CCTAGG 1 cut(s) 146
BanII GRGCYC 1 cut(s) 942
BarI GAAGNNNNNNTAC 2 cut(s) 401, 433
BbsI GAAGAC 1 cut(s) 1080
Bbv12I GWGCWC 2 cut(s) 903, 942
BbvI GCAGC 3 cut(s) 456, 669, 1079
BccI CCATC 4 cut(s) 28, 182, 209, 314
BceAI ACGGC 1 cut(s) 894
BciT130I CCWGG 2 cut(s) 465, 484
BcnI CCSGG 2 cut(s) 19, 607
BcoDI GTCTC 4 cut(s) 64, 358, 723, 801
BfaI CTAG 3 cut(s) 147, 489, 738
BisI GCNGC 6 cut(s) 84, 470, 603, 658, 882, 1068
BlnI CCTAGG 1 cut(s) 146
BlsI GCNGC 6 cut(s) 85, 471, 604, 659, 883, 1069
Bme1390I CCNGG 4 cut(s) 19, 465, 484, 607
Bme18I GGWCC 2 cut(s) 581, 958
BmgT120I GGNCC 2 cut(s) 581, 958
BmiI GGNNCC 4 cut(s) 119, 144, 172, 481
BmrFI CCNGG 4 cut(s) 19, 465, 484, 607
BmrI ACTGGG 1 cut(s) 825
BmsI GCATC 3 cut(s) 322, 756, 834
BmuI ACTGGG 1 cut(s) 825
BpiI GAAGAC 1 cut(s) 1080
Bpu14I TTCGAA 1 cut(s) 496
BpuEI CTTGAG 2 cut(s) 791, 869
BpuMI CCSGG 2 cut(s) 19, 607
BsaBI GATNNNNATC 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 1077
BsaI GGTCTC 1 cut(s) 64
BsaJI CCNNGG 5 cut(s) 146, 463, 464, 483, 606
BsaWI WCCGGW 6 cut(s) 74, 361, 391, 520, 1021, 1045
Bsc4I CCNNNNNNNGG 4 cut(s) 25, 489, 689, 955
Bse118I RCCGGY 3 cut(s) 566, 709, 1045
Bse1I ACTGG 4 cut(s) 312, 625, 820, 826
Bse8I GATNNNNATC 1 cut(s) 38
BseBI CCWGG 2 cut(s) 465, 484
BseDI CCNNGG 5 cut(s) 146, 463, 464, 483, 606
BseGI GGATG 2 cut(s) 201, 901
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 4 cut(s) 25, 489, 689, 955
BseNI ACTGG 4 cut(s) 312, 625, 820, 826
BseRI GAGGAG 3 cut(s) 110, 257, 1010
BseX3I CGGCCG 1 cut(s) 603
BseXI GCAGC 3 cut(s) 456, 669, 1079
BsgI GTGCAG 1 cut(s) 1026
Bsh1285I CGRYCG 1 cut(s) 606
BshFI GGCC 5 cut(s) 96, 208, 566, 605, 713
BshTI ACCGGT 1 cut(s) 1045
BsiEI CGRYCG 1 cut(s) 606
BsiHKAI GWGCWC 2 cut(s) 903, 942
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 4 cut(s) 25, 489, 689, 955
BsmAI GTCTC 4 cut(s) 64, 358, 723, 801
BsmBI CGTCTC 1 cut(s) 358
BsmFI GGGAC 1 cut(s) 329
BsnI GGCC 5 cut(s) 96, 208, 566, 605, 713
Bso31I GGTCTC 1 cut(s) 64
Bsp119I TTCGAA 1 cut(s) 496
Bsp1286I GDGCHC 2 cut(s) 903, 942
Bsp143I GATC 2 cut(s) 394, 517
BspANI GGCC 5 cut(s) 96, 208, 566, 605, 713
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 4 cut(s) 119, 144, 172, 481
BspPI GGATC 2 cut(s) 402, 512
BspQI GCTCTTC 1 cut(s) 781
BspT104I TTCGAA 1 cut(s) 496
BspTNI GGTCTC 1 cut(s) 64
BsrBI CCGCTC 1 cut(s) 220
BsrFI RCCGGY 3 cut(s) 566, 709, 1045
BsrI ACTGG 4 cut(s) 312, 625, 820, 826
BssAI RCCGGY 3 cut(s) 566, 709, 1045
BssECI CCNNGG 5 cut(s) 146, 463, 464, 483, 606
BssMI GATC 2 cut(s) 394, 517
BssNI GRCGYC 1 cut(s) 1077
BssT1I CCWWGG 1 cut(s) 146
Bst2UI CCWGG 2 cut(s) 465, 484
Bst4CI ACNGT 2 cut(s) 298, 860
Bst6I CTCTTC 2 cut(s) 781, 948
BstACI GRCGYC 1 cut(s) 1077
BstBI TTCGAA 1 cut(s) 496
BstC8I GCNNGC 4 cut(s) 531, 568, 711, 807
BstDEI CTNAG 1 cut(s) 405
BstF5I GGATG 2 cut(s) 201, 901
BstKTI GATC 2 cut(s) 397, 520
BstMAI GTCTC 4 cut(s) 64, 358, 723, 801
BstMBI GATC 2 cut(s) 394, 517
BstMCI CGRYCG 1 cut(s) 606
BstMWI GCNNNNNNNGC 6 cut(s) 158, 193, 890, 907, 1064, 1076
BstNI CCWGG 2 cut(s) 465, 484
BstNSI RCATGY 1 cut(s) 595
BstSCI CCNGG 4 cut(s) 17, 463, 482, 605
BstV1I GCAGC 3 cut(s) 456, 669, 1079
BstV2I GAAGAC 1 cut(s) 1080
BstX2I RGATCY 1 cut(s) 394
BstYI RGATCY 1 cut(s) 394
BstZI CGGCCG 1 cut(s) 603
BsuRI GGCC 5 cut(s) 96, 208, 566, 605, 713
BtsCI GGATG 2 cut(s) 201, 901
BtsIMutI CAGTG 1 cut(s) 305
Cac8I GCNNGC 4 cut(s) 531, 568, 711, 807
CciI TCATGA 1 cut(s) 454
Cfr10I RCCGGY 3 cut(s) 566, 709, 1045
Cfr13I GGNCC 2 cut(s) 581, 958
CseI GACGC 2 cut(s) 811, 1085
Csp6I GTAC 1 cut(s) 1038
CspAI ACCGGT 1 cut(s) 1045
CviAII CATG 8 cut(s) 157, 262, 279, 421, 455, 544, 592, 706
CviQI GTAC 1 cut(s) 1038
DdeI CTNAG 1 cut(s) 405
DpnI GATC 2 cut(s) 396, 519
DpnII GATC 2 cut(s) 394, 517
DraIII CACNNNGTG 1 cut(s) 215
EaeI YGGCCR 3 cut(s) 206, 603, 711
EagI CGGCCG 1 cut(s) 603
Eam1104I CTCTTC 2 cut(s) 781, 948
EarI CTCTTC 2 cut(s) 781, 948
EciI GGCGGA 1 cut(s) 908
Ecl136II GAGCTC 1 cut(s) 940
EclXI CGGCCG 1 cut(s) 603
Eco130I CCWWGG 1 cut(s) 146
Eco24I GRGCYC 1 cut(s) 942
Eco31I GGTCTC 1 cut(s) 64
Eco47I GGWCC 2 cut(s) 581, 958
Eco52I CGGCCG 1 cut(s) 603
Eco53kI GAGCTC 1 cut(s) 940
Eco57I CTGAAG 2 cut(s) 215, 1092
EcoICRI GAGCTC 1 cut(s) 940
EcoO109I RGGNCCY 2 cut(s) 581, 958
EcoRII CCWGG 2 cut(s) 463, 482
EcoT14I CCWWGG 1 cut(s) 146
EcoT38I GRGCYC 1 cut(s) 942
ErhI CCWWGG 1 cut(s) 146
Esp3I CGTCTC 1 cut(s) 358
FaeI CATG 8 cut(s) 160, 265, 282, 424, 458, 547, 595, 709
FalI AAGNNNNNCTT 2 cut(s) 945, 977
FaqI GGGAC 1 cut(s) 329
FatI CATG 8 cut(s) 156, 261, 278, 420, 454, 543, 591, 705
FauI CCCGC 1 cut(s) 563
FblI GTMKAC 1 cut(s) 830
Fnu4HI GCNGC 6 cut(s) 84, 470, 603, 658, 882, 1068
FokI GGATG 2 cut(s) 188, 908
FriOI GRGCYC 1 cut(s) 942
Fsp4HI GCNGC 6 cut(s) 84, 470, 603, 658, 882, 1068
FspBI CTAG 3 cut(s) 147, 489, 738
GluI GCNGC 6 cut(s) 84, 470, 603, 658, 882, 1068
HaeIII GGCC 5 cut(s) 96, 208, 566, 605, 713
HgaI GACGC 2 cut(s) 811, 1085
Hin1I GRCGYC 1 cut(s) 1077
Hin1II CATG 8 cut(s) 160, 265, 282, 424, 458, 547, 595, 709
HincII GTYRAC 2 cut(s) 7, 673
HindII GTYRAC 2 cut(s) 7, 673
HinfI GANTC 3 cut(s) 384, 1001, 1028
HpaI GTTAAC 1 cut(s) 673
HphI GGTGA 4 cut(s) 43, 190, 227, 535
Hpy166II GTNNAC 4 cut(s) 7, 237, 673, 831
Hpy188I TCNGA 8 cut(s) 68, 129, 331, 399, 510, 517, 723, 801
Hpy188III TCNNGA 1 cut(s) 455
Hpy8I GTNNAC 4 cut(s) 7, 237, 673, 831
Hpy99I CGWCG 2 cut(s) 169, 805
HpyAV CCTTC 4 cut(s) 130, 250, 403, 556
HpyCH4III ACNGT 2 cut(s) 298, 860
HpyCH4IV ACGT 2 cut(s) 758, 836
HpyCH4V TGCA 6 cut(s) 107, 305, 755, 809, 972, 1043
HpyF10VI GCNNNNNNNGC 6 cut(s) 158, 193, 890, 907, 1064, 1076
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 2 cut(s) 758, 836
Hsp92I GRCGYC 1 cut(s) 1077
Hsp92II CATG 8 cut(s) 160, 265, 282, 424, 458, 547, 595, 709
KroI GCCGGC 2 cut(s) 566, 709
KroNI GCCGGC 2 cut(s) 568, 711
KspAI GTTAAC 1 cut(s) 673
Kzo9I GATC 2 cut(s) 394, 517
LguI GCTCTTC 1 cut(s) 781
LmnI GCTCC 3 cut(s) 68, 123, 142
Lsp1109I GCAGC 3 cut(s) 456, 669, 1079
LweI GCATC 3 cut(s) 322, 756, 834
MaeI CTAG 3 cut(s) 147, 489, 738
MaeII ACGT 2 cut(s) 758, 836
MalI GATC 2 cut(s) 396, 519
MbiI CCGCTC 1 cut(s) 220
MboI GATC 2 cut(s) 394, 517
MboII GAAGA 6 cut(s) 142, 145, 221, 798, 965, 1085
MflI RGATCY 1 cut(s) 394
MhlI GDGCHC 2 cut(s) 903, 942
MluCI AATT 2 cut(s) 498, 624
MlyI GAGTC 2 cut(s) 378, 1022
MmeI TCCRAC 3 cut(s) 746, 824, 895
MroNI GCCGGC 2 cut(s) 566, 709
MroXI GAANNNNTTC 1 cut(s) 413
MseI TTAA 1 cut(s) 672
MslI CAYNNNNRTG 2 cut(s) 102, 596
MspA1I CMGCKG 1 cut(s) 1070
MspR9I CCNGG 4 cut(s) 19, 465, 484, 607
MvaI CCWGG 2 cut(s) 465, 484
MwoI GCNNNNNNNGC 6 cut(s) 158, 193, 890, 907, 1064, 1076
NaeI GCCGGC 2 cut(s) 568, 711
NciI CCSGG 2 cut(s) 19, 607
NdeII GATC 2 cut(s) 394, 517
NgoMIV GCCGGC 2 cut(s) 566, 709
NlaIII CATG 8 cut(s) 160, 265, 282, 424, 458, 547, 595, 709
NlaIV GGNNCC 4 cut(s) 119, 144, 172, 481
NspI RCATGY 1 cut(s) 595
NspV TTCGAA 1 cut(s) 496
PagI TCATGA 1 cut(s) 454
PasI CCCWGGG 1 cut(s) 464
PciI ACATGT 1 cut(s) 591
PciSI GCTCTTC 1 cut(s) 781
PdiI GCCGGC 2 cut(s) 568, 711
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 1 cut(s) 1001
PinAI ACCGGT 1 cut(s) 1045
PkrI GCNGC 6 cut(s) 85, 471, 604, 659, 883, 1069
PleI GAGTC 2 cut(s) 378, 1022
PpsI GAGTC 2 cut(s) 378, 1022
PpuMI RGGWCCY 2 cut(s) 581, 958
PscI ACATGT 1 cut(s) 591
Psp124BI GAGCTC 1 cut(s) 942
Psp5II RGGWCCY 2 cut(s) 581, 958
Psp6I CCWGG 2 cut(s) 463, 482
PspGI CCWGG 2 cut(s) 463, 482
PspN4I GGNNCC 4 cut(s) 119, 144, 172, 481
PspPI GGNCC 2 cut(s) 581, 958
PspPPI RGGWCCY 2 cut(s) 581, 958
PsuI RGATCY 1 cut(s) 394
PvuII CAGCTG 1 cut(s) 1070
RsaI GTAC 1 cut(s) 1039
RsaNI GTAC 1 cut(s) 1038
RseI CAYNNNNRTG 2 cut(s) 102, 596
SacI GAGCTC 1 cut(s) 942
SapI GCTCTTC 1 cut(s) 781
SaqAI TTAA 1 cut(s) 672
SatI GCNGC 6 cut(s) 84, 470, 603, 658, 882, 1068
Sau3AI GATC 2 cut(s) 394, 517
Sau96I GGNCC 2 cut(s) 581, 958
SchI GAGTC 2 cut(s) 378, 1022
ScrFI CCNGG 4 cut(s) 19, 465, 484, 607
SduI GDGCHC 2 cut(s) 903, 942
SfaNI GCATC 3 cut(s) 322, 756, 834
SfuI TTCGAA 1 cut(s) 496
SgrAI CRCCGGYG 1 cut(s) 1045
SinI GGWCC 2 cut(s) 581, 958
SmiMI CAYNNNNRTG 2 cut(s) 102, 596
SmlI CTYRAG 2 cut(s) 770, 848
SmoI CTYRAG 2 cut(s) 770, 848
Sse9I AATT 2 cut(s) 498, 624
SspMI CTAG 3 cut(s) 147, 489, 738
SstI GAGCTC 1 cut(s) 942
StyD4I CCNGG 4 cut(s) 17, 463, 482, 605
StyI CCWWGG 1 cut(s) 146
TaaI ACNGT 2 cut(s) 298, 860
TaiI ACGT 2 cut(s) 761, 839
TaqI TCGA 2 cut(s) 496, 1031
TasI AATT 2 cut(s) 498, 624
TauI GCSGC 3 cut(s) 86, 605, 884
TfiI GAWTC 1 cut(s) 1001
Tru1I TTAA 1 cut(s) 672
Tru9I TTAA 1 cut(s) 672
TscAI CASTG 1 cut(s) 312
TseI GCWGC 3 cut(s) 469, 657, 1067
TspDTI ATGAA 2 cut(s) 145, 998
TspGWI ACGGA 2 cut(s) 254, 457
TspRI CASTG 1 cut(s) 312
VpaK11BI GGWCC 2 cut(s) 581, 958
XceI RCATGY 1 cut(s) 595
XmaJI CCTAGG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 830
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 3 cut(s) 147, 489, 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.