FvH4_2g24951

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000109
Physical Location & Seq
Forward (+)
20277066 .. 20278507
1442 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24951.t1

Sequence Viewer

Length: 1194 bp
ATGGGGAATCTCAAGTTTTATTTTATAACGATGGGTTCCTTCTGGGGTTTGCGCAATCGGCTCACCATCCGGCCACAAGGTGAGAGATATATCCTTCGGTTCACGGAGGCGGCTGACCGGAAGGAGATGATGGAGAGCGGACCGTGGTTTTTTGGGAAAACGGTTTTTGCTTTGGCTGAGTATGATGGCCACTCTGATGCAGCGGCGGTTCCAATTGTTTCTGTCCTGGTGTGGGTCGAAGTCTTTGGCCTCCCACCGGATTTGATGACCAAGCAGGCGCTCTACATGGTGGGTTCAACGCTCGGCCGTATCATCACTCATGACAACCCTAGGCTTCTCAACGGTTCCAAGGCTAAGGTTCGTATTGATCATCAGATTTCTGATCTAGTGAAGCAGGCGTTCCCTCCCATGCGGTTTGAGTTTGGTGAAGGTGCTGATCTGACTGTTACAATGCTCACATTCAAATATGAGCGTACGTGCGGCTTTTGCAGGGTTTGTGGTTTGTTGGAACACAAAGCCGGAGGGTGTCAAGGTCCTCCAAACATGTCGGCGGCAGCGGGAGAGCATGGATATGGAAGTAGGGTTATCCCTAACCCGAACCCTAGCAGCAGCTCCTCTATTGTAAACCCGTTTCTAGCTTCAGGTTTTGTTTTGTCTAAGCCGGGTATGGCAGCGGCAGCGCTTACTGCCTCCCTCCAACGTCGTCCTAATCCAGTACCAGTTGTCGCTCCTCAAGCTCCAGTTCTGGTTTCTCAAGCCAAGTCCCTGCCGTTTGTATTGTCTGGGAAGAAACGGTCGGCTGTGTCCCTAATGCTTGAAGACCAAGGTAAGCATCCGAAAGGCATGGTGGTGGTTGAGTCAGAGGAGCATCCTACGCTCGGTCCGGTCCTAGAGCTTTCTCTCCCTCACTTGGCAGGGTCGTTGATTGTTTCTCTCCCGAAGAAACGTAAAGTTGGGCGTTCGTTAGGCTCTCTGAACAAGAAGGAAGAGGTAATCCATCCTTGGCAATTGGAGGCGAAAGCACAAACTAAGAGCTCCAAGTCTAAGAAGAGGTCCTTCGGTTCTGCAAAAAGGACTCTGAATTTGGGAGAGGAGGATTCGGTTAGCATTACACCGAGGGCCTCGATTGATACTGCACCGGAGGATATGACGGTGGAGACGAGTGAAGACGCCGGAACTACTCCCTCTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

398

Amino Acids

43.06

Weight (kDa)

9.38

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 137 - 177 1.4e-06 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 26
Acc16I TGCGCA 1 cut(s) 53
AccBSI CCGCTC 1 cut(s) 138
AciI CCGC 9 cut(s) 110, 138, 203, 206, 412, 480, 551, 557, 674
AcoI YGGCCR 3 cut(s) 71, 187, 304
AcsI RAATTY 1 cut(s) 1081
AcuI CTGAAG 1 cut(s) 624
AcyI GRCGYC 1 cut(s) 1170
AdeI CACNNNGTG 1 cut(s) 80
AfaI GTAC 2 cut(s) 475, 717
AfeI AGCGCT 1 cut(s) 681
AfiI CCNNNNNNNGG 4 cut(s) 232, 256, 878, 910
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 3 cut(s) 297, 463, 818
AjnI CCWGG 1 cut(s) 225
AluBI AGCT 5 cut(s) 612, 638, 737, 895, 1035
AluI AGCT 5 cut(s) 612, 638, 737, 895, 1035
Alw21I GWGCWC 1 cut(s) 1037
Alw26I GTCTC 1 cut(s) 1151
Aor51HI AGCGCT 1 cut(s) 681
AoxI GGCC 5 cut(s) 71, 187, 247, 304, 1119
ApeKI GCWGC 6 cut(s) 200, 554, 606, 609, 671, 677
ApoI RAATTY 1 cut(s) 1081
ArsI GACNNNNNNTTYG 2 cut(s) 1066, 1098
AspA2I CCTAGG 1 cut(s) 329
AspLEI GCGC 3 cut(s) 54, 280, 682
AspS9I GGNCC 6 cut(s) 140, 533, 881, 886, 1053, 1119
AsuC2I CCSGG 1 cut(s) 663
AsuHPI GGTGA 3 cut(s) 55, 92, 437
AvaII GGWCC 5 cut(s) 140, 533, 881, 886, 1053
AvrII CCTAGG 1 cut(s) 329
BalI TGGCCA 1 cut(s) 189
BanII GRGCYC 1 cut(s) 1037
BbsI GAAGAC 2 cut(s) 825, 1173
Bbv12I GWGCWC 1 cut(s) 1037
BbvI GCAGC 6 cut(s) 212, 566, 618, 621, 683, 689
BccI CCATC 5 cut(s) 25, 74, 124, 179, 1005
BceAI ACGGC 2 cut(s) 291, 754
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 1 cut(s) 367
BcnI CCSGG 1 cut(s) 663
BcoDI GTCTC 1 cut(s) 1151
BfaI CTAG 5 cut(s) 330, 386, 603, 635, 890
BfoI RGCGCY 2 cut(s) 281, 683
BlnI CCTAGG 1 cut(s) 329
Bme1390I CCNGG 2 cut(s) 227, 663
Bme18I GGWCC 5 cut(s) 140, 533, 881, 886, 1053
BmgT120I GGNCC 6 cut(s) 140, 533, 881, 886, 1053, 1119
BmiI GGNNCC 3 cut(s) 37, 210, 346
BmrFI CCNGG 2 cut(s) 227, 663
BmsI GCATC 3 cut(s) 187, 841, 877
BpiI GAAGAC 2 cut(s) 825, 1173
BpmI CTGGAG 1 cut(s) 723
Bpu10I CCTNAGC 1 cut(s) 354
BpuEI CTTGAG 2 cut(s) 717, 738
BpuMI CCSGG 1 cut(s) 663
BsaAI YACGTR 1 cut(s) 477
BsaHI GRCGYC 1 cut(s) 1170
BsaJI CCNNGG 6 cut(s) 143, 329, 348, 823, 1001, 1115
BsaWI WCCGGW 4 cut(s) 117, 256, 883, 1138
Bsc4I CCNNNNNNNGG 4 cut(s) 232, 256, 878, 910
Bse1I ACTGG 3 cut(s) 713, 719, 740
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 6 cut(s) 143, 329, 348, 823, 1001, 1115
BseGI GGATG 4 cut(s) 66, 832, 868, 997
BseLI CCNNNNNNNGG 4 cut(s) 232, 256, 878, 910
BseMII CTCAG 1 cut(s) 168
BseNI ACTGG 3 cut(s) 713, 719, 740
BseRI GAGGAG 4 cut(s) 604, 720, 878, 1106
BseX3I CGGCCG 1 cut(s) 304
BseXI GCAGC 6 cut(s) 212, 566, 618, 621, 683, 689
BsgI GTGCAG 1 cut(s) 1119
Bsh1285I CGRYCG 2 cut(s) 307, 797
BshFI GGCC 5 cut(s) 73, 189, 249, 306, 1121
BsiEI CGRYCG 2 cut(s) 307, 797
BsiHKAI GWGCWC 1 cut(s) 1037
BsiSI CCGG 8 cut(s) 70, 118, 257, 519, 662, 884, 1139, 1173
BsiWI CGTACG 1 cut(s) 473
BslFI GGGAC 2 cut(s) 748, 790
BslI CCNNNNNNNGG 4 cut(s) 232, 256, 878, 910
BsmAI GTCTC 1 cut(s) 1151
BsmBI CGTCTC 1 cut(s) 1151
BsmFI GGGAC 2 cut(s) 748, 790
BsnI GGCC 5 cut(s) 73, 189, 249, 306, 1121
Bsp1286I GDGCHC 1 cut(s) 1037
Bsp143I GATC 3 cut(s) 367, 382, 436
BspACI CCGC 9 cut(s) 110, 138, 203, 206, 412, 480, 551, 557, 674
BspANI GGCC 5 cut(s) 73, 189, 249, 306, 1121
BspCNI CTCAG 1 cut(s) 169
BspHI TCATGA 1 cut(s) 319
BspLI GGNNCC 3 cut(s) 37, 210, 346
BsrBI CCGCTC 1 cut(s) 138
BsrI ACTGG 3 cut(s) 713, 719, 740
BssECI CCNNGG 6 cut(s) 143, 329, 348, 823, 1001, 1115
BssMI GATC 3 cut(s) 367, 382, 436
BssNI GRCGYC 1 cut(s) 1170
BssT1I CCWWGG 4 cut(s) 329, 348, 823, 1001
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 6 cut(s) 144, 163, 344, 445, 795, 1153
Bst6I CTCTTC 2 cut(s) 981, 1043
BstACI GRCGYC 1 cut(s) 1170
BstBAI YACGTR 1 cut(s) 477
BstC8I GCNNGC 2 cut(s) 276, 396
BstDEI CTNAG 5 cut(s) 177, 354, 657, 1029, 1044
BstDSI CCRYGG 1 cut(s) 143
BstF5I GGATG 4 cut(s) 66, 832, 868, 997
BstH2I RGCGCY 2 cut(s) 281, 683
BstHHI GCGC 3 cut(s) 54, 280, 682
BstKTI GATC 3 cut(s) 370, 385, 439
BstMAI GTCTC 1 cut(s) 1151
BstMBI GATC 3 cut(s) 367, 382, 436
BstMCI CGRYCG 2 cut(s) 307, 797
BstMWI GCNNNNNNNGC 6 cut(s) 58, 486, 677, 686, 734, 874
BstNI CCWGG 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 547
BstSCI CCNGG 2 cut(s) 225, 661
BstV1I GCAGC 6 cut(s) 212, 566, 618, 621, 683, 689
BstV2I GAAGAC 2 cut(s) 825, 1173
BstZI CGGCCG 1 cut(s) 304
BsuRI GGCC 5 cut(s) 73, 189, 249, 306, 1121
BtgI CCRYGG 1 cut(s) 143
BtsCI GGATG 4 cut(s) 66, 832, 868, 997
Cac8I GCNNGC 2 cut(s) 276, 396
CciI TCATGA 1 cut(s) 319
CfoI GCGC 3 cut(s) 54, 280, 682
Cfr13I GGNCC 6 cut(s) 140, 533, 881, 886, 1053, 1119
CpoI CGGWCCG 2 cut(s) 140, 881
CseI GACGC 1 cut(s) 1178
Csp6I GTAC 2 cut(s) 474, 716
CspCI CAANNNNNGTGG 2 cut(s) 243, 278
CspI CGGWCCG 2 cut(s) 140, 881
CviAII CATG 6 cut(s) 286, 320, 409, 544, 566, 844
CviQI GTAC 2 cut(s) 474, 716
DdeI CTNAG 5 cut(s) 177, 354, 657, 1029, 1044
DpnI GATC 3 cut(s) 369, 384, 438
DpnII GATC 3 cut(s) 367, 382, 436
DraIII CACNNNGTG 1 cut(s) 80
EaeI YGGCCR 3 cut(s) 71, 187, 304
EagI CGGCCG 1 cut(s) 304
Eam1104I CTCTTC 2 cut(s) 981, 1043
EarI CTCTTC 2 cut(s) 981, 1043
Ecl136II GAGCTC 1 cut(s) 1035
EclXI CGGCCG 1 cut(s) 304
Eco130I CCWWGG 4 cut(s) 329, 348, 823, 1001
Eco24I GRGCYC 1 cut(s) 1037
Eco47I GGWCC 5 cut(s) 140, 533, 881, 886, 1053
Eco47III AGCGCT 1 cut(s) 681
Eco52I CGGCCG 1 cut(s) 304
Eco53kI GAGCTC 1 cut(s) 1035
Eco57I CTGAAG 1 cut(s) 624
EcoICRI GAGCTC 1 cut(s) 1035
EcoO109I RGGNCCY 3 cut(s) 533, 1053, 1119
EcoRII CCWGG 1 cut(s) 225
EcoT14I CCWWGG 4 cut(s) 329, 348, 823, 1001
EcoT38I GRGCYC 1 cut(s) 1037
ErhI CCWWGG 4 cut(s) 329, 348, 823, 1001
Esp3I CGTCTC 1 cut(s) 1151
FaeI CATG 6 cut(s) 289, 323, 412, 547, 569, 847
FalI AAGNNNNNCTT 2 cut(s) 1040, 1072
FaqI GGGAC 2 cut(s) 748, 790
FatI CATG 6 cut(s) 285, 319, 408, 543, 565, 843
FauI CCCGC 1 cut(s) 550
FbaI TGATCA 1 cut(s) 367
FokI GGATG 4 cut(s) 53, 819, 855, 984
FriOI GRGCYC 1 cut(s) 1037
FspBI CTAG 5 cut(s) 330, 386, 603, 635, 890
FspI TGCGCA 1 cut(s) 53
GlaI GCGC 3 cut(s) 53, 279, 681
GsuI CTGGAG 1 cut(s) 723
HaeII RGCGCY 2 cut(s) 281, 683
HaeIII GGCC 5 cut(s) 73, 189, 249, 306, 1121
HapII CCGG 8 cut(s) 70, 118, 257, 519, 662, 884, 1139, 1173
HgaI GACGC 1 cut(s) 1178
HhaI GCGC 3 cut(s) 54, 280, 682
Hin1I GRCGYC 1 cut(s) 1170
Hin1II CATG 6 cut(s) 289, 323, 412, 547, 569, 847
Hin6I GCGC 3 cut(s) 52, 278, 680
HinP1I GCGC 3 cut(s) 52, 278, 680
HinfI GANTC 4 cut(s) 7, 857, 1075, 1097
HpaII CCGG 8 cut(s) 70, 118, 257, 519, 662, 884, 1139, 1173
HphI GGTGA 3 cut(s) 55, 92, 437
Hpy166II GTNNAC 2 cut(s) 102, 625
Hpy188I TCNGA 8 cut(s) 196, 375, 382, 441, 837, 862, 975, 1080
Hpy188III TCNNGA 2 cut(s) 320, 937
Hpy8I GTNNAC 2 cut(s) 102, 625
Hpy99I CGWCG 1 cut(s) 705
HpyAV CCTTC 6 cut(s) 49, 104, 115, 422, 976, 1066
HpyCH4III ACNGT 6 cut(s) 144, 163, 344, 445, 795, 1153
HpyCH4IV ACGT 3 cut(s) 476, 700, 946
HpyCH4V TGCA 4 cut(s) 200, 489, 1067, 1136
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 486, 677, 686, 734, 874
HpyF3I CTNAG 5 cut(s) 177, 354, 657, 1029, 1044
HpySE526I ACGT 3 cut(s) 476, 700, 946
Hsp92I GRCGYC 1 cut(s) 1170
Hsp92II CATG 6 cut(s) 289, 323, 412, 547, 569, 847
HspAI GCGC 3 cut(s) 52, 278, 680
Ksp22I TGATCA 1 cut(s) 367
Kzo9I GATC 3 cut(s) 367, 382, 436
LmnI GCTCC 5 cut(s) 617, 733, 742, 865, 1040
Lsp1109I GCAGC 6 cut(s) 212, 566, 618, 621, 683, 689
LweI GCATC 3 cut(s) 187, 841, 877
MaeI CTAG 5 cut(s) 330, 386, 603, 635, 890
MaeII ACGT 3 cut(s) 476, 700, 946
MaeIII GTNAC 1 cut(s) 445
MalI GATC 3 cut(s) 369, 384, 438
MbiI CCGCTC 1 cut(s) 138
MboI GATC 3 cut(s) 367, 382, 436
MboII GAAGA 6 cut(s) 799, 830, 952, 998, 1060, 1178
MfeI CAATTG 2 cut(s) 213, 1007
MhlI GDGCHC 1 cut(s) 1037
MlsI TGGCCA 1 cut(s) 189
MluCI AATT 3 cut(s) 213, 1007, 1081
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 2 cut(s) 866, 1069
MmeI TCCRAC 2 cut(s) 486, 721
Mox20I TGGCCA 1 cut(s) 189
MscI TGGCCA 1 cut(s) 189
MslI CAYNNNNRTG 3 cut(s) 195, 570, 848
Msp20I TGGCCA 1 cut(s) 189
MspA1I CMGCKG 3 cut(s) 203, 557, 674
MspI CCGG 8 cut(s) 70, 118, 257, 519, 662, 884, 1139, 1173
MspR9I CCNGG 2 cut(s) 227, 663
MunI CAATTG 2 cut(s) 213, 1007
MvaI CCWGG 1 cut(s) 227
MwoI GCNNNNNNNGC 6 cut(s) 58, 486, 677, 686, 734, 874
NciI CCSGG 1 cut(s) 663
NdeII GATC 3 cut(s) 367, 382, 436
NlaIII CATG 6 cut(s) 289, 323, 412, 547, 569, 847
NlaIV GGNNCC 3 cut(s) 37, 210, 346
NmeAIII GCCGAG 1 cut(s) 282
NsbI TGCGCA 1 cut(s) 53
NspI RCATGY 1 cut(s) 547
PagI TCATGA 1 cut(s) 319
PciI ACATGT 1 cut(s) 543
PcsI WCGNNNNNNNCGW 1 cut(s) 1157
PfeI GAWTC 2 cut(s) 7, 1097
Pfl23II CGTACG 1 cut(s) 473
PleI GAGTC 2 cut(s) 865, 1069
PpsI GAGTC 2 cut(s) 865, 1069
Ppu21I YACGTR 1 cut(s) 477
PpuMI RGGWCCY 2 cut(s) 533, 1053
PscI ACATGT 1 cut(s) 543
PsiI TTATAA 1 cut(s) 26
Psp124BI GAGCTC 1 cut(s) 1037
Psp5II RGGWCCY 2 cut(s) 533, 1053
Psp6I CCWGG 1 cut(s) 225
PspGI CCWGG 1 cut(s) 225
PspLI CGTACG 1 cut(s) 473
PspN4I GGNNCC 3 cut(s) 37, 210, 346
PspPI GGNCC 6 cut(s) 140, 533, 881, 886, 1053, 1119
PspPPI RGGWCCY 2 cut(s) 533, 1053
RsaI GTAC 2 cut(s) 475, 717
RsaNI GTAC 2 cut(s) 474, 716
RseI CAYNNNNRTG 3 cut(s) 195, 570, 848
Rsr2I CGGWCCG 2 cut(s) 140, 881
RsrII CGGWCCG 2 cut(s) 140, 881
SacI GAGCTC 1 cut(s) 1037
Sau3AI GATC 3 cut(s) 367, 382, 436
Sau96I GGNCC 6 cut(s) 140, 533, 881, 886, 1053, 1119
SchI GAGTC 2 cut(s) 866, 1069
ScrFI CCNGG 2 cut(s) 227, 663
SduI GDGCHC 1 cut(s) 1037
SfaNI GCATC 3 cut(s) 187, 841, 877
SinI GGWCC 5 cut(s) 140, 533, 881, 886, 1053
SmiMI CAYNNNNRTG 3 cut(s) 195, 570, 848
SmlI CTYRAG 3 cut(s) 11, 732, 753
SmoI CTYRAG 3 cut(s) 11, 732, 753
Sse9I AATT 3 cut(s) 213, 1007, 1081
SsiI CCGC 9 cut(s) 110, 138, 203, 206, 412, 480, 551, 557, 674
SspMI CTAG 5 cut(s) 330, 386, 603, 635, 890
SstI GAGCTC 1 cut(s) 1037
StyD4I CCNGG 2 cut(s) 225, 661
StyI CCWWGG 4 cut(s) 329, 348, 823, 1001
TaaI ACNGT 6 cut(s) 144, 163, 344, 445, 795, 1153
TaiI ACGT 3 cut(s) 479, 703, 949
TaqI TCGA 2 cut(s) 237, 1124
TaqII GACCGA 1 cut(s) 869
TasI AATT 3 cut(s) 213, 1007, 1081
TauI GCSGC 5 cut(s) 113, 206, 483, 554, 677
TfiI GAWTC 2 cut(s) 7, 1097
TseI GCWGC 6 cut(s) 200, 554, 606, 609, 671, 677
TspGWI ACGGA 1 cut(s) 119
VpaK11BI GGWCC 5 cut(s) 140, 533, 881, 886, 1053
XapI RAATTY 1 cut(s) 1081
XceI RCATGY 1 cut(s) 547
XmaJI CCTAGG 1 cut(s) 329
XspI CTAG 5 cut(s) 330, 386, 603, 635, 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.