Rmu_sc0006847.1_g000005

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006847.1
OG0000109
Physical Location & Seq
Forward (+)
15637 .. 16979
1343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006847.1_g000005.1.cds

Sequence Viewer

Length: 1212 bp
atggttgatcacatcaccgctcgccttgctgctgctctagctatctcggaggatggtcgtacgtccttcggcccggccggggctgctacggtgtcctccgatcattttgcagtgggaagattattctctattacggccaagcgccgttgtgatccaaaggctttcataggtaccatgacctctctctgggggcttggtaatcgtctgtctgtccgggcacaccaggatcgatatgtttttcaatttgttcatatggaggaccggtcgaggattgtcgaaggtgctccatggttctttggcaagtgggctcttactatggcggagttcgatggactacaaaattttgcttctgttcccctttcttcagtgccggtctgggttgagatcatgggacttcctctggctcttgtcactgagggaacagtggcacttattggagccacgctaggggagatggtgaatcttgacaggtcgggcattcgtaagggtacggcggcgcgggttaggatcagacatgccttgtcggagttggtgagacaagttttccctccctccttctttgacttcacgtctggagcatctgccactgtgagattcaggtacgaacgcctcgtcgatttttgccgtgtttgtgggatgttagaacatcaacgtttgggttgtgctgggccgccagaggtggtagtgaccaccattggtatatcagggtcggctttagctacatatgtggcaaagatcccggcttcaattattgtccctaagctagtgatggtcgatgataatgctgatgttcccatcactgggaagaagagaactgcagctgtggctttggtgcaatattcaaaacgtaagaggtctgatactgtaatccctcccactgaatcggtggttctggattttgaaccggaactagctctgaagaatactaatgagattctcctagtctctcctaccaagaaggcaaaggttggctggcccccaggtcgcaataataatcccaaatcaattggtttgaagcctaggaagctgactggtgaggtagtcaaacctcgcagtaagagaaactttaaggcaattgatcttccttctccttctggggaaggttgcatggtggagatttcatcctctagcaaagtgcctaaactgaaggaaagcactctcaagagtgccctagactgggtggggtttgggagcatgaataaattgagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

403

Amino Acids

43.8

Weight (kDa)

9.87

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 170
AccB1I GGYRCC 1 cut(s) 170
AccBSI CCGCTC 1 cut(s) 20
AccII CGCG 1 cut(s) 499
AciI CCGC 5 cut(s) 18, 320, 494, 499, 671
AclI AACGTT 1 cut(s) 652
AclWI GGATC 4 cut(s) 146, 234, 515, 730
AcoI YGGCCR 2 cut(s) 75, 135
AcsI RAATTY 1 cut(s) 340
AcuI CTGAAG 3 cut(s) 348, 938, 1166
AfaI GTAC 4 cut(s) 61, 172, 490, 602
AfiI CCNNNNNNNGG 7 cut(s) 79, 186, 447, 800, 801, 1176, 1177
AgeI ACCGGT 1 cut(s) 261
AgsI TTSAA 5 cut(s) 242, 747, 843, 902, 1015
AhdI GACNNNNNGTC 1 cut(s) 568
AjiI CACGTC 1 cut(s) 570
AjnI CCWGG 2 cut(s) 222, 979
AluBI AGCT 6 cut(s) 41, 719, 763, 821, 914, 1027
AluI AGCT 6 cut(s) 41, 719, 763, 821, 914, 1027
Alw21I GWGCWC 1 cut(s) 286
Alw26I GTCTC 2 cut(s) 529, 949
AlwI GGATC 4 cut(s) 146, 234, 515, 730
AoxI GGCC 5 cut(s) 70, 75, 135, 668, 974
ApeKI GCWGC 4 cut(s) 29, 32, 83, 818
ApoI RAATTY 1 cut(s) 340
ArsI GACNNNNNNTTYG 2 cut(s) 597, 629
AsiGI ACCGGT 1 cut(s) 261
Asp718I GGTACC 1 cut(s) 170
AspA2I CCTAGG 1 cut(s) 1019
AspLEI GCGC 2 cut(s) 144, 499
AspS9I GGNCC 4 cut(s) 71, 259, 668, 975
AsuC2I CCSGG 4 cut(s) 74, 79, 215, 740
AsuHPI GGTGA 4 cut(s) 7, 469, 544, 1046
AvaII GGWCC 1 cut(s) 259
AvrII CCTAGG 1 cut(s) 1019
BaeGI GKGCMC 2 cut(s) 220, 1171
BanI GGYRCC 1 cut(s) 170
BanII GRGCYC 1 cut(s) 310
Bbv12I GWGCWC 1 cut(s) 286
BbvI GCAGC 4 cut(s) 16, 19, 70, 830
BccI CCATC 5 cut(s) 47, 323, 448, 763, 803
BceAI ACGGC 4 cut(s) 129, 150, 507, 609
BcgI CGANNNNNNTGC 4 cut(s) 89, 123, 764, 798
BciT130I CCWGG 2 cut(s) 224, 981
BclI TGATCA 1 cut(s) 7
BcnI CCSGG 4 cut(s) 74, 79, 215, 740
BcoDI GTCTC 2 cut(s) 529, 949
BfaI CTAG 8 cut(s) 38, 446, 764, 911, 941, 1020, 1128, 1172
BfmI CTRYAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 145
BisI GCNGC 6 cut(s) 30, 33, 84, 495, 671, 819
BlnI CCTAGG 1 cut(s) 1019
BlsI GCNGC 6 cut(s) 31, 34, 85, 496, 672, 820
Bme1390I CCNGG 6 cut(s) 74, 79, 215, 224, 740, 981
Bme18I GGWCC 1 cut(s) 259
BmeRI GACNNNNNGTC 1 cut(s) 568
BmgBI CACGTC 1 cut(s) 570
BmgT120I GGNCC 4 cut(s) 71, 259, 668, 975
BmiI GGNNCC 3 cut(s) 172, 439, 977
BmrFI CCNGG 6 cut(s) 74, 79, 215, 224, 740, 981
BmrI ACTGGG 2 cut(s) 810, 1186
BmsI GCATC 1 cut(s) 587
BmuI ACTGGG 2 cut(s) 810, 1186
BpmI CTGGAG 1 cut(s) 594
Bpu10I CCTNAGC 1 cut(s) 759
BpuEI CTTGAG 1 cut(s) 1145
BpuMI CCSGG 4 cut(s) 74, 79, 215, 740
Bsa29I ATCGAT 1 cut(s) 229
BsaJI CCNNGG 4 cut(s) 78, 287, 979, 1019
BsaWI WCCGGW 2 cut(s) 261, 904
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 7 cut(s) 79, 186, 447, 800, 801, 1176, 1177
Bse118I RCCGGY 2 cut(s) 261, 370
Bse1I ACTGG 3 cut(s) 805, 1036, 1181
BseBI CCWGG 2 cut(s) 224, 981
BseCI ATCGAT 1 cut(s) 229
BseDI CCNNGG 4 cut(s) 78, 287, 979, 1019
BseGI GGATG 3 cut(s) 58, 642, 1121
BseLI CCNNNNNNNGG 7 cut(s) 79, 186, 447, 800, 801, 1176, 1177
BseMII CTCAG 1 cut(s) 405
BseNI ACTGG 3 cut(s) 805, 1036, 1181
BseSI GKGCMC 2 cut(s) 220, 1171
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 4 cut(s) 16, 19, 70, 830
BseYI CCCAGC 1 cut(s) 665
Bsh1236I CGCG 1 cut(s) 499
Bsh1285I CGRYCG 2 cut(s) 78, 266
BshFI GGCC 5 cut(s) 72, 77, 137, 670, 976
BshNI GGYRCC 1 cut(s) 170
BshTI ACCGGT 1 cut(s) 261
BshVI ATCGAT 1 cut(s) 229
BsiEI CGRYCG 2 cut(s) 78, 266
BsiHKAI GWGCWC 1 cut(s) 286
BsiSI CCGG 7 cut(s) 74, 78, 214, 262, 371, 740, 905
BsiWI CGTACG 1 cut(s) 59
BslFI GGGAC 2 cut(s) 405, 740
BslI CCNNNNNNNGG 7 cut(s) 79, 186, 447, 800, 801, 1176, 1177
BsmAI GTCTC 2 cut(s) 529, 949
BsmFI GGGAC 2 cut(s) 405, 740
BsmI GAATGC 1 cut(s) 477
BsnI GGCC 5 cut(s) 72, 77, 137, 670, 976
Bsp1286I GDGCHC 4 cut(s) 220, 286, 310, 1171
Bsp143I GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 5 cut(s) 18, 320, 494, 499, 671
BspANI GGCC 5 cut(s) 72, 77, 137, 670, 976
BspCNI CTCAG 1 cut(s) 406
BspDI ATCGAT 1 cut(s) 229
BspFNI CGCG 1 cut(s) 499
BspLI GGNNCC 3 cut(s) 172, 439, 977
BspMAI CTGCAG 1 cut(s) 820
BspPI GGATC 4 cut(s) 146, 234, 515, 730
BspT107I GGYRCC 1 cut(s) 170
BsrBI CCGCTC 1 cut(s) 20
BsrFI RCCGGY 2 cut(s) 261, 370
BsrI ACTGG 3 cut(s) 805, 1036, 1181
BssAI RCCGGY 2 cut(s) 261, 370
BssECI CCNNGG 4 cut(s) 78, 287, 979, 1019
BssMI GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
BssT1I CCWWGG 2 cut(s) 287, 1019
Bst2UI CCWGG 2 cut(s) 224, 981
Bst4CI ACNGT 4 cut(s) 91, 424, 589, 865
Bst6I CTCTTC 1 cut(s) 803
BstC8I GCNNGC 2 cut(s) 22, 974
BstDEI CTNAG 2 cut(s) 414, 759
BstDSI CCRYGG 1 cut(s) 287
BstF5I GGATG 3 cut(s) 58, 642, 1121
BstFNI CGCG 1 cut(s) 499
BstH2I RGCGCY 1 cut(s) 145
BstHHI GCGC 2 cut(s) 144, 499
BstKTI GATC 8 cut(s) 10, 103, 154, 229, 387, 510, 738, 1081
BstMAI GTCTC 2 cut(s) 529, 949
BstMBI GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
BstMCI CGRYCG 2 cut(s) 78, 266
BstMWI GCNNNNNNNGC 5 cut(s) 26, 38, 83, 824, 1024
BstNI CCWGG 2 cut(s) 224, 981
BstNSI RCATGY 1 cut(s) 518
BstSCI CCNGG 6 cut(s) 72, 77, 213, 222, 738, 979
BstSFI CTRYAG 1 cut(s) 816
BstSLI GKGCMC 2 cut(s) 220, 1171
BstUI CGCG 1 cut(s) 499
BstV1I GCAGC 4 cut(s) 16, 19, 70, 830
BstX2I RGATCY 1 cut(s) 735
BstYI RGATCY 1 cut(s) 735
BstZI CGGCCG 1 cut(s) 75
Bsu15I ATCGAT 1 cut(s) 229
BsuRI GGCC 5 cut(s) 72, 77, 137, 670, 976
BsuTUI ATCGAT 1 cut(s) 229
BtgI CCRYGG 1 cut(s) 287
BtrI CACGTC 1 cut(s) 570
BtsCI GGATG 3 cut(s) 58, 642, 1121
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 7 cut(s) 117, 372, 411, 429, 585, 798, 876
Cac8I GCNNGC 2 cut(s) 22, 974
CfoI GCGC 2 cut(s) 144, 499
Cfr10I RCCGGY 2 cut(s) 261, 370
Cfr13I GGNCC 4 cut(s) 71, 259, 668, 975
ClaI ATCGAT 1 cut(s) 229
Csp6I GTAC 4 cut(s) 60, 171, 489, 601
CspAI ACCGGT 1 cut(s) 261
CviAII CATG 6 cut(s) 175, 288, 388, 515, 1108, 1195
CviQI GTAC 4 cut(s) 60, 171, 489, 601
DdeI CTNAG 2 cut(s) 414, 759
DpnI GATC 8 cut(s) 9, 102, 153, 228, 386, 509, 737, 1080
DpnII GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
DriI GACNNNNNGTC 1 cut(s) 568
EaeI YGGCCR 2 cut(s) 75, 135
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 1 cut(s) 803
Eam1105I GACNNNNNGTC 1 cut(s) 568
EarI CTCTTC 1 cut(s) 803
EciI GGCGGA 1 cut(s) 335
EclXI CGGCCG 1 cut(s) 75
Eco130I CCWWGG 2 cut(s) 287, 1019
Eco24I GRGCYC 1 cut(s) 310
Eco47I GGWCC 1 cut(s) 259
Eco52I CGGCCG 1 cut(s) 75
Eco57I CTGAAG 3 cut(s) 348, 938, 1166
EcoRII CCWGG 2 cut(s) 222, 979
EcoT14I CCWWGG 2 cut(s) 287, 1019
EcoT38I GRGCYC 1 cut(s) 310
ErhI CCWWGG 2 cut(s) 287, 1019
FaeI CATG 6 cut(s) 178, 291, 391, 518, 1111, 1198
FalI AAGNNNNNCTT 2 cut(s) 1049, 1081
FaqI GGGAC 2 cut(s) 405, 740
FatI CATG 6 cut(s) 174, 287, 387, 514, 1107, 1194
FauI CCCGC 1 cut(s) 492
FauNDI CATATG 2 cut(s) 252, 724
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 6 cut(s) 30, 33, 84, 495, 671, 819
FokI GGATG 3 cut(s) 65, 649, 1108
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 6 cut(s) 30, 33, 84, 495, 671, 819
FspBI CTAG 8 cut(s) 38, 446, 764, 911, 941, 1020, 1128, 1172
GlaI GCGC 2 cut(s) 143, 498
GluI GCNGC 6 cut(s) 30, 33, 84, 495, 671, 819
GsaI CCCAGC 1 cut(s) 669
GsuI CTGGAG 1 cut(s) 594
HaeII RGCGCY 1 cut(s) 145
HaeIII GGCC 5 cut(s) 72, 77, 137, 670, 976
HapII CCGG 7 cut(s) 74, 78, 214, 262, 371, 740, 905
HhaI GCGC 2 cut(s) 144, 499
Hin1II CATG 6 cut(s) 178, 291, 391, 518, 1111, 1198
Hin6I GCGC 2 cut(s) 142, 497
HinP1I GCGC 2 cut(s) 142, 497
HinfI GANTC 4 cut(s) 460, 594, 881, 934
HpaII CCGG 7 cut(s) 74, 78, 214, 262, 371, 740, 905
HphI GGTGA 4 cut(s) 7, 469, 544, 1046
Hpy188I TCNGA 6 cut(s) 49, 100, 512, 526, 859, 918
Hpy188III TCNNGA 4 cut(s) 464, 573, 893, 1162
Hpy99I CGWCG 1 cut(s) 617
HpyAV CCTTC 8 cut(s) 76, 272, 565, 952, 1094, 1095, 1101, 1141
HpyCH4III ACNGT 4 cut(s) 91, 424, 589, 865
HpyCH4IV ACGT 4 cut(s) 62, 569, 652, 847
HpyCH4V TGCA 4 cut(s) 110, 818, 835, 1107
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 38, 83, 824, 1024
HpyF3I CTNAG 2 cut(s) 414, 759
HpySE526I ACGT 4 cut(s) 62, 569, 652, 847
Hsp92II CATG 6 cut(s) 178, 291, 391, 518, 1111, 1198
HspAI GCGC 2 cut(s) 142, 497
KpnI GGTACC 1 cut(s) 174
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
LmnI GCTCC 4 cut(s) 289, 437, 575, 1191
Lsp1109I GCAGC 4 cut(s) 16, 19, 70, 830
LweI GCATC 1 cut(s) 587
MaeI CTAG 8 cut(s) 38, 446, 764, 911, 941, 1020, 1128, 1172
MaeII ACGT 4 cut(s) 62, 569, 652, 847
MaeIII GTNAC 2 cut(s) 409, 685
MalI GATC 8 cut(s) 9, 102, 153, 228, 386, 509, 737, 1080
MbiI CCGCTC 1 cut(s) 20
MboI GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
MboII GAAGA 6 cut(s) 129, 354, 817, 820, 931, 1073
MfeI CAATTG 2 cut(s) 1005, 1074
MflI RGATCY 1 cut(s) 735
MhlI GDGCHC 4 cut(s) 220, 286, 310, 1171
MluCI AATT 6 cut(s) 242, 340, 747, 1005, 1074, 1202
MmeI TCCRAC 1 cut(s) 504
MseI TTAA 1 cut(s) 1068
MspA1I CMGCKG 1 cut(s) 821
MspI CCGG 7 cut(s) 74, 78, 214, 262, 371, 740, 905
MspR9I CCNGG 6 cut(s) 74, 79, 215, 224, 740, 981
MunI CAATTG 2 cut(s) 1005, 1074
Mva1269I GAATGC 1 cut(s) 477
MvaI CCWGG 2 cut(s) 224, 981
MvnI CGCG 1 cut(s) 499
MwoI GCNNNNNNNGC 5 cut(s) 26, 38, 83, 824, 1024
NciI CCSGG 4 cut(s) 74, 79, 215, 740
NcoI CCATGG 1 cut(s) 287
NdeI CATATG 2 cut(s) 252, 724
NdeII GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
NlaIII CATG 6 cut(s) 178, 291, 391, 518, 1111, 1198
NlaIV GGNNCC 3 cut(s) 172, 439, 977
NmuCI GTSAC 2 cut(s) 409, 685
NspI RCATGY 1 cut(s) 518
PcsI WCGNNNNNNNCGW 1 cut(s) 609
PctI GAATGC 1 cut(s) 477
PfeI GAWTC 4 cut(s) 460, 594, 881, 934
Pfl23II CGTACG 1 cut(s) 59
PinAI ACCGGT 1 cut(s) 261
PkrI GCNGC 6 cut(s) 31, 34, 85, 496, 672, 820
Psp1406I AACGTT 1 cut(s) 652
Psp6I CCWGG 2 cut(s) 222, 979
PspFI CCCAGC 1 cut(s) 665
PspGI CCWGG 2 cut(s) 222, 979
PspLI CGTACG 1 cut(s) 59
PspN4I GGNNCC 3 cut(s) 172, 439, 977
PspPI GGNCC 4 cut(s) 71, 259, 668, 975
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 1 cut(s) 735
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 4 cut(s) 61, 172, 490, 602
RsaNI GTAC 4 cut(s) 60, 171, 489, 601
SaqAI TTAA 1 cut(s) 1068
SatI GCNGC 6 cut(s) 30, 33, 84, 495, 671, 819
Sau3AI GATC 8 cut(s) 7, 100, 151, 226, 384, 507, 735, 1078
Sau96I GGNCC 4 cut(s) 71, 259, 668, 975
ScrFI CCNGG 6 cut(s) 74, 79, 215, 224, 740, 981
SduI GDGCHC 4 cut(s) 220, 286, 310, 1171
SfaNI GCATC 1 cut(s) 587
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 1 cut(s) 259
SmlI CTYRAG 1 cut(s) 1160
SmoI CTYRAG 1 cut(s) 1160
Sse9I AATT 6 cut(s) 242, 340, 747, 1005, 1074, 1202
SsiI CCGC 5 cut(s) 18, 320, 494, 499, 671
SspI AATATT 1 cut(s) 839
SspMI CTAG 8 cut(s) 38, 446, 764, 911, 941, 1020, 1128, 1172
StyD4I CCNGG 6 cut(s) 72, 77, 213, 222, 738, 979
StyI CCWWGG 2 cut(s) 287, 1019
TaaI ACNGT 4 cut(s) 91, 424, 589, 865
TaiI ACGT 4 cut(s) 65, 572, 655, 850
TaqI TCGA 6 cut(s) 229, 266, 276, 327, 615, 774
TasI AATT 6 cut(s) 242, 340, 747, 1005, 1074, 1202
TauI GCSGC 2 cut(s) 497, 673
TfiI GAWTC 4 cut(s) 460, 594, 881, 934
Tru1I TTAA 1 cut(s) 1068
Tru9I TTAA 1 cut(s) 1068
TscAI CASTG 7 cut(s) 117, 372, 418, 429, 592, 805, 883
TseFI GTSAC 2 cut(s) 409, 685
TseI GCWGC 4 cut(s) 29, 32, 83, 818
Tsp45I GTSAC 2 cut(s) 409, 685
TspDTI ATGAA 4 cut(s) 154, 239, 1110, 1211
TspRI CASTG 7 cut(s) 117, 372, 418, 429, 592, 805, 883
VpaK11BI GGWCC 1 cut(s) 259
XapI RAATTY 1 cut(s) 340
XceI RCATGY 1 cut(s) 518
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XmaJI CCTAGG 1 cut(s) 1019
XspI CTAG 8 cut(s) 38, 446, 764, 911, 941, 1020, 1128, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.