Rmu_sc0003517.1_g000004

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003517.1
OG0000109
Physical Location & Seq
Forward (+)
12527 .. 15365
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003517.1_g000004.1.cds

Sequence Viewer

Length: 1242 bp
atgcgtgttggagatcatctggctgtcgagggacctaatgaccgtttcaagtatgagcctggccaaattagaactgttgggaccgagactctggattcactccgatgttccaggaggtctcggcctgtatggctgctgcgctcgcaatcaaggagaatgggagggtgtcgtttggggttgcgggttcatctgcgatctccagtcattcatatgcaatcgggagacttttgtctcagaagaagagattcacatcctttcatggccaccatggccaatgtgtgggggttgaaacaacgactctctatccggaatcaaggtgatcgattcattttgcgcttcaacaagacggaggaacgggataagatcttgttcggagggccgtggttttacaatcgctttatgtttgctttggctgcgtatgacggctgttgtgaggaggagacgacgcccatcccagcaatcccattggacaaatcgaacatccgctgtggtgtgaaggctagggttcgcatctcccacctgatcataactccggtgaagcaagcctaccctcccatgcttttcgagttcggtacaggaaaagacatggtctttgccagggtaactttcaggtatgagaagatggttgggttctgcagggtttacggcttactagaacatccggcagcaggctgcgcagggccgttggatatgtctggtaccatcgttgtggcaggggcacagaatcaggcaggccattcggaggggggtggctctaaccctaggttgaacccgccccctgtgtttggttttgttgggacggttgagggtagggatttggtgaggtacatcaacaaagcccgagcaatggttcatgttcccataactgaacatgtgagtattggttttgtccctaagttagctctacctcaccaggttggtatcttgattatctatcccccaaagaagcacaaggtgggacgtcctttaggtgcaaagaataagccaagggtggaggagatttatccttggaagctggggactatgtcaaccaagaaaactaagaagcgccagtttcatactgctgagaaagttttggttatggaggaggatacggtggtgttggaggttcctgtgaaggaaggctctccaatggtgtcagttgaacctgagaagactacggtggtggaggaggccatcgtaggagaggctactcccatgagtttggtgactgtggatcctggggatgccccctctgtgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

413

Amino Acids

46.09

Weight (kDa)

9.66

Isoelectric Point (pI)

50.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 964
Acc16I TGCGCA 1 cut(s) 676
Acc65I GGTACC 1 cut(s) 698
AccB1I GGYRCC 1 cut(s) 698
AccB7I CCANNNNNTGG 1 cut(s) 279
AccIII TCCGGA 1 cut(s) 306
AciI CCGC 3 cut(s) 181, 484, 773
AclWI GGATC 2 cut(s) 1211, 1224
AcoI YGGCCR 3 cut(s) 61, 261, 270
AcyI GRCGYC 2 cut(s) 446, 961
AdeI CACNNNGTG 1 cut(s) 955
AfaI GTAC 3 cut(s) 574, 700, 827
AfiI CCNNNNNNNGG 5 cut(s) 279, 668, 742, 785, 847
AflIII ACRYGT 1 cut(s) 871
AgsI TTSAA 5 cut(s) 49, 289, 340, 769, 1145
AjnI CCWGG 5 cut(s) 58, 110, 596, 912, 1219
AluBI AGCT 2 cut(s) 902, 1015
AluI AGCT 2 cut(s) 902, 1015
Alw26I GTCTC 5 cut(s) 80, 123, 216, 236, 434
AlwI GGATC 2 cut(s) 1211, 1224
Ama87I CYCGRG 1 cut(s) 840
Aor13HI TCCGGA 1 cut(s) 306
AoxI GGCC 8 cut(s) 61, 122, 261, 270, 377, 680, 733, 1173
ApeKI GCWGC 5 cut(s) 133, 136, 413, 665, 672
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
Asp700I GAANNNNTTC 1 cut(s) 244
Asp718I GGTACC 1 cut(s) 698
AspA2I CCTAGG 1 cut(s) 761
AspLEI GCGC 4 cut(s) 141, 336, 677, 1050
AspS9I GGNCC 4 cut(s) 32, 81, 377, 680
AsuHPI GGTGA 5 cut(s) 329, 547, 832, 902, 1219
AvaI CYCGRG 1 cut(s) 840
AvaII GGWCC 2 cut(s) 32, 81
AvrII CCTAGG 1 cut(s) 761
BaeGI GKGCMC 1 cut(s) 721
BaeI ACNNNNGTAYC 4 cut(s) 690, 723, 1083, 1116
BalI TGGCCA 3 cut(s) 63, 263, 272
BamHI GGATCC 1 cut(s) 1216
BanI GGYRCC 1 cut(s) 698
BarI GAAGNNNNNNTAC 2 cut(s) 530, 562
BbsI GAAGAC 1 cut(s) 1160
BbvI GCAGC 5 cut(s) 120, 123, 400, 659, 677
BccI CCATC 4 cut(s) 458, 616, 710, 1184
BceAI ACGGC 4 cut(s) 364, 439, 661, 667
BcgI CGANNNNNNTGC 2 cut(s) 720, 754
BciT130I CCWGG 5 cut(s) 60, 112, 598, 914, 1221
BciVI GTATCC 1 cut(s) 1084
BclI TGATCA 1 cut(s) 522
BcoDI GTCTC 5 cut(s) 80, 123, 216, 236, 434
BfaI CTAG 3 cut(s) 501, 653, 762
BfmI CTRYAG 1 cut(s) 634
BfoI RGCGCY 1 cut(s) 1051
BfuI GTATCC 1 cut(s) 1084
BglI GCCNNNNNGGC 2 cut(s) 130, 269
BglII AGATCT 1 cut(s) 363
BisI GCNGC 5 cut(s) 134, 137, 414, 666, 673
BlnI CCTAGG 1 cut(s) 761
BlsI GCNGC 5 cut(s) 135, 138, 415, 667, 674
Bme1390I CCNGG 5 cut(s) 60, 112, 598, 914, 1221
Bme18I GGWCC 2 cut(s) 32, 81
BmeT110I CYCGRG 1 cut(s) 840
BmgT120I GGNCC 4 cut(s) 32, 81, 377, 680
BmiI GGNNCC 5 cut(s) 33, 82, 700, 1110, 1218
BmrFI CCNGG 5 cut(s) 60, 112, 598, 914, 1221
BmsI GCATC 2 cut(s) 519, 1216
BoxI GACNNNNGTC 1 cut(s) 228
BpiI GAAGAC 1 cut(s) 1160
BpmI CTGGAG 1 cut(s) 183
Bsa29I ATCGAT 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 249
BsaHI GRCGYC 2 cut(s) 446, 961
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 7 cut(s) 267, 380, 597, 761, 986, 1007, 1220
BsaWI WCCGGW 2 cut(s) 306, 532
Bsc4I CCNNNNNNNGG 5 cut(s) 279, 668, 742, 785, 847
Bse1I ACTGG 2 cut(s) 200, 1051
Bse3DI GCAATG 1 cut(s) 852
Bse8I GATNNNNATC 1 cut(s) 249
BseAI TCCGGA 1 cut(s) 306
BseBI CCWGG 5 cut(s) 60, 112, 598, 914, 1221
BseCI ATCGAT 1 cut(s) 322
BseDI CCNNGG 7 cut(s) 267, 380, 597, 761, 986, 1007, 1220
BseGI GGATG 5 cut(s) 250, 450, 480, 658, 1231
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 5 cut(s) 279, 668, 742, 785, 847
BseMI GCAATG 1 cut(s) 852
BseMII CTCAG 3 cut(s) 247, 1056, 1140
BseNI ACTGG 2 cut(s) 200, 1051
BseRI GAGGAG 5 cut(s) 449, 452, 1010, 1100, 1184
BseSI GKGCMC 1 cut(s) 721
BseXI GCAGC 5 cut(s) 120, 123, 400, 659, 677
BseYI CCCAGC 2 cut(s) 454, 1015
BshFI GGCC 8 cut(s) 63, 124, 263, 272, 379, 682, 735, 1175
BshNI GGYRCC 1 cut(s) 698
BshVI ATCGAT 1 cut(s) 322
BsiHKCI CYCGRG 1 cut(s) 840
BsiSI CCGG 3 cut(s) 307, 533, 662
BslFI GGGAC 6 cut(s) 45, 94, 811, 875, 972, 1033
BslI CCNNNNNNNGG 5 cut(s) 279, 668, 742, 785, 847
BsmAI GTCTC 5 cut(s) 80, 123, 216, 236, 434
BsmBI CGTCTC 1 cut(s) 434
BsmFI GGGAC 6 cut(s) 45, 94, 811, 875, 972, 1033
BsnI GGCC 8 cut(s) 63, 124, 263, 272, 379, 682, 735, 1175
Bso31I GGTCTC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 840
Bsp1286I GDGCHC 1 cut(s) 721
Bsp13I TCCGGA 1 cut(s) 306
Bsp143I GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
Bsp19I CCATGG 1 cut(s) 267
BspACI CCGC 3 cut(s) 181, 484, 773
BspANI GGCC 8 cut(s) 63, 124, 263, 272, 379, 682, 735, 1175
BspCNI CTCAG 3 cut(s) 246, 1057, 1141
BspDI ATCGAT 1 cut(s) 322
BspEI TCCGGA 1 cut(s) 306
BspLI GGNNCC 5 cut(s) 33, 82, 700, 1110, 1218
BspMAI CTGCAG 1 cut(s) 638
BspPI GGATC 2 cut(s) 1211, 1224
BspT107I GGYRCC 1 cut(s) 698
BspTNI GGTCTC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 852
BsrI ACTGG 2 cut(s) 200, 1051
BssECI CCNNGG 7 cut(s) 267, 380, 597, 761, 986, 1007, 1220
BssMI GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
BssNI GRCGYC 2 cut(s) 446, 961
BssT1I CCWWGG 4 cut(s) 267, 761, 986, 1007
Bst2UI CCWGG 5 cut(s) 60, 112, 598, 914, 1221
Bst4CI ACNGT 6 cut(s) 44, 76, 802, 1096, 1162, 1213
Bst6I CTCTTC 1 cut(s) 235
BstACI GRCGYC 2 cut(s) 446, 961
BstC8I GCNNGC 4 cut(s) 143, 543, 670, 733
BstDEI CTNAG 5 cut(s) 233, 894, 1041, 1065, 1149
BstDSI CCRYGG 2 cut(s) 267, 380
BstF5I GGATG 5 cut(s) 250, 450, 480, 658, 1231
BstH2I RGCGCY 1 cut(s) 1051
BstHHI GCGC 4 cut(s) 141, 336, 677, 1050
BstKTI GATC 6 cut(s) 16, 197, 322, 366, 525, 1219
BstMAI GTCTC 5 cut(s) 80, 123, 216, 236, 434
BstMBI GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
BstMWI GCNNNNNNNGC 5 cut(s) 130, 142, 269, 413, 674
BstNI CCWGG 5 cut(s) 60, 112, 598, 914, 1221
BstNSI RCATGY 1 cut(s) 875
BstPAI GACNNNNGTC 1 cut(s) 228
BstSCI CCNGG 5 cut(s) 58, 110, 596, 912, 1219
BstSFI CTRYAG 1 cut(s) 634
BstSLI GKGCMC 1 cut(s) 721
BstV1I GCAGC 5 cut(s) 120, 123, 400, 659, 677
BstV2I GAAGAC 1 cut(s) 1160
BstX2I RGATCY 2 cut(s) 363, 1216
BstXI CCANNNNNNTGG 2 cut(s) 709, 1204
BstYI RGATCY 2 cut(s) 363, 1216
Bsu15I ATCGAT 1 cut(s) 322
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 8 cut(s) 63, 124, 263, 272, 379, 682, 735, 1175
BsuTUI ATCGAT 1 cut(s) 322
BtgI CCRYGG 2 cut(s) 267, 380
BtsCI GGATG 5 cut(s) 250, 450, 480, 658, 1231
Cac8I GCNNGC 4 cut(s) 143, 543, 670, 733
CfoI GCGC 4 cut(s) 141, 336, 677, 1050
Cfr13I GGNCC 4 cut(s) 32, 81, 377, 680
ClaI ATCGAT 1 cut(s) 322
CseI GACGC 1 cut(s) 454
CsiI ACCWGGT 1 cut(s) 912
Csp6I GTAC 3 cut(s) 573, 699, 826
CviAII CATG 7 cut(s) 259, 268, 556, 586, 854, 872, 1198
CviQI GTAC 3 cut(s) 573, 699, 826
DdeI CTNAG 5 cut(s) 233, 894, 1041, 1065, 1149
DpnI GATC 6 cut(s) 15, 196, 321, 365, 524, 1218
DpnII GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
DraIII CACNNNGTG 1 cut(s) 955
EaeI YGGCCR 3 cut(s) 61, 261, 270
Eam1104I CTCTTC 1 cut(s) 235
EarI CTCTTC 1 cut(s) 235
Eco130I CCWWGG 4 cut(s) 267, 761, 986, 1007
Eco31I GGTCTC 1 cut(s) 123
Eco47I GGWCC 2 cut(s) 32, 81
Eco88I CYCGRG 1 cut(s) 840
EcoO109I RGGNCCY 1 cut(s) 32
EcoRII CCWGG 5 cut(s) 58, 110, 596, 912, 1219
EcoT14I CCWWGG 4 cut(s) 267, 761, 986, 1007
ErhI CCWWGG 4 cut(s) 267, 761, 986, 1007
Esp3I CGTCTC 1 cut(s) 434
FaeI CATG 7 cut(s) 262, 271, 559, 589, 857, 875, 1201
FaqI GGGAC 6 cut(s) 45, 94, 811, 875, 972, 1033
FatI CATG 7 cut(s) 258, 267, 555, 585, 853, 871, 1197
FauI CCCGC 2 cut(s) 174, 780
FauNDI CATATG 1 cut(s) 210
FbaI TGATCA 1 cut(s) 522
Fnu4HI GCNGC 5 cut(s) 134, 137, 414, 666, 673
FokI GGATG 5 cut(s) 237, 437, 467, 645, 1238
Fsp4HI GCNGC 5 cut(s) 134, 137, 414, 666, 673
FspBI CTAG 3 cut(s) 501, 653, 762
FspI TGCGCA 1 cut(s) 676
GlaI GCGC 4 cut(s) 140, 335, 676, 1049
GluI GCNGC 5 cut(s) 134, 137, 414, 666, 673
GsaI CCCAGC 2 cut(s) 458, 1019
GsuI CTGGAG 1 cut(s) 183
HaeII RGCGCY 1 cut(s) 1051
HaeIII GGCC 8 cut(s) 63, 124, 263, 272, 379, 682, 735, 1175
HapII CCGG 3 cut(s) 307, 533, 662
HgaI GACGC 1 cut(s) 454
HhaI GCGC 4 cut(s) 141, 336, 677, 1050
Hin1I GRCGYC 2 cut(s) 446, 961
Hin1II CATG 7 cut(s) 262, 271, 559, 589, 857, 875, 1201
Hin6I GCGC 4 cut(s) 139, 334, 675, 1048
HinP1I GCGC 4 cut(s) 139, 334, 675, 1048
HincII GTYRAC 1 cut(s) 1029
HindII GTYRAC 1 cut(s) 1029
HinfI GANTC 7 cut(s) 88, 95, 245, 297, 310, 324, 724
HpaII CCGG 3 cut(s) 307, 533, 662
HphI GGTGA 5 cut(s) 329, 547, 832, 902, 1219
Hpy166II GTNNAC 2 cut(s) 643, 1029
Hpy188I TCNGA 4 cut(s) 104, 236, 374, 742
Hpy188III TCNNGA 4 cut(s) 92, 219, 307, 925
Hpy8I GTNNAC 2 cut(s) 643, 1029
Hpy99I CGWCG 1 cut(s) 448
HpyAV CCTTC 3 cut(s) 490, 1111, 1115
HpyCH4III ACNGT 6 cut(s) 44, 76, 802, 1096, 1162, 1213
HpyCH4IV ACGT 1 cut(s) 961
HpyCH4V TGCA 3 cut(s) 214, 636, 974
HpyF10VI GCNNNNNNNGC 5 cut(s) 130, 142, 269, 413, 674
HpyF3I CTNAG 5 cut(s) 233, 894, 1041, 1065, 1149
HpySE526I ACGT 1 cut(s) 961
Hsp92I GRCGYC 2 cut(s) 446, 961
Hsp92II CATG 7 cut(s) 262, 271, 559, 589, 857, 875, 1201
HspAI GCGC 4 cut(s) 139, 334, 675, 1048
Kpn2I TCCGGA 1 cut(s) 306
KpnI GGTACC 1 cut(s) 702
Ksp22I TGATCA 1 cut(s) 522
Kzo9I GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
Lsp1109I GCAGC 5 cut(s) 120, 123, 400, 659, 677
LweI GCATC 2 cut(s) 519, 1216
MabI ACCWGGT 1 cut(s) 912
MaeI CTAG 3 cut(s) 501, 653, 762
MaeII ACGT 1 cut(s) 961
MaeIII GTNAC 2 cut(s) 601, 1207
MalI GATC 6 cut(s) 15, 196, 321, 365, 524, 1218
MboI GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
MboII GAAGA 4 cut(s) 249, 252, 631, 1165
MflI RGATCY 2 cut(s) 363, 1216
MhlI GDGCHC 1 cut(s) 721
MlsI TGGCCA 3 cut(s) 63, 263, 272
MluCI AATT 1 cut(s) 66
MluNI TGGCCA 3 cut(s) 63, 263, 272
MlyI GAGTC 2 cut(s) 82, 291
MmeI TCCRAC 2 cut(s) 666, 1083
Mox20I TGGCCA 3 cut(s) 63, 263, 272
MroI TCCGGA 1 cut(s) 306
MroXI GAANNNNTTC 1 cut(s) 244
MscI TGGCCA 3 cut(s) 63, 263, 272
MslI CAYNNNNRTG 3 cut(s) 103, 209, 707
Msp20I TGGCCA 3 cut(s) 63, 263, 272
MspA1I CMGCKG 1 cut(s) 486
MspI CCGG 3 cut(s) 307, 533, 662
MspR9I CCNGG 5 cut(s) 60, 112, 598, 914, 1221
MvaI CCWGG 5 cut(s) 60, 112, 598, 914, 1221
MwoI GCNNNNNNNGC 5 cut(s) 130, 142, 269, 413, 674
NcoI CCATGG 1 cut(s) 267
NdeI CATATG 1 cut(s) 210
NdeII GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
NlaIII CATG 7 cut(s) 262, 271, 559, 589, 857, 875, 1201
NlaIV GGNNCC 5 cut(s) 33, 82, 700, 1110, 1218
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 1207
NsbI TGCGCA 1 cut(s) 676
NspI RCATGY 1 cut(s) 875
PciI ACATGT 1 cut(s) 871
PdmI GAANNNNTTC 1 cut(s) 244
PfeI GAWTC 5 cut(s) 95, 245, 310, 324, 724
PflFI GACNNNGTC 2 cut(s) 587, 1024
PflMI CCANNNNNTGG 1 cut(s) 279
PfoI TCCNGGA 1 cut(s) 110
PkrI GCNGC 5 cut(s) 135, 138, 415, 667, 674
PleI GAGTC 2 cut(s) 82, 291
PpsI GAGTC 2 cut(s) 82, 291
PpuMI RGGWCCY 1 cut(s) 32
PscI ACATGT 1 cut(s) 871
PshAI GACNNNNGTC 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 32
Psp6I CCWGG 5 cut(s) 58, 110, 596, 912, 1219
PspFI CCCAGC 2 cut(s) 454, 1015
PspGI CCWGG 5 cut(s) 58, 110, 596, 912, 1219
PspN4I GGNNCC 5 cut(s) 33, 82, 700, 1110, 1218
PspPI GGNCC 4 cut(s) 32, 81, 377, 680
PspPPI RGGWCCY 1 cut(s) 32
PstI CTGCAG 1 cut(s) 638
PsuI RGATCY 2 cut(s) 363, 1216
PsyI GACNNNGTC 2 cut(s) 587, 1024
RsaI GTAC 3 cut(s) 574, 700, 827
RsaNI GTAC 3 cut(s) 573, 699, 826
RseI CAYNNNNRTG 3 cut(s) 103, 209, 707
SatI GCNGC 5 cut(s) 134, 137, 414, 666, 673
Sau3AI GATC 6 cut(s) 13, 194, 319, 363, 522, 1216
Sau96I GGNCC 4 cut(s) 32, 81, 377, 680
SchI GAGTC 2 cut(s) 82, 291
ScrFI CCNGG 5 cut(s) 60, 112, 598, 914, 1221
SduI GDGCHC 1 cut(s) 721
SexAI ACCWGGT 1 cut(s) 912
SfaNI GCATC 2 cut(s) 519, 1216
SfcI CTRYAG 1 cut(s) 634
SfiI GGCCNNNNNGGCC 1 cut(s) 269
SinI GGWCC 2 cut(s) 32, 81
SmiMI CAYNNNNRTG 3 cut(s) 103, 209, 707
Sse9I AATT 1 cut(s) 66
SsiI CCGC 3 cut(s) 181, 484, 773
SspMI CTAG 3 cut(s) 501, 653, 762
StyD4I CCNGG 5 cut(s) 58, 110, 596, 912, 1219
StyI CCWWGG 4 cut(s) 267, 761, 986, 1007
TaaI ACNGT 6 cut(s) 44, 76, 802, 1096, 1162, 1213
TaiI ACGT 1 cut(s) 964
TaqI TCGA 4 cut(s) 27, 322, 476, 564
TaqII GACCGA 1 cut(s) 98
TasI AATT 1 cut(s) 66
TfiI GAWTC 5 cut(s) 95, 245, 310, 324, 724
TseFI GTSAC 1 cut(s) 1207
TseI GCWGC 5 cut(s) 133, 136, 413, 665, 672
Tsp45I GTSAC 1 cut(s) 1207
TspDTI ATGAA 6 cut(s) 176, 197, 247, 316, 842, 1046
TspGWI ACGGA 1 cut(s) 362
Tth111I GACNNNGTC 2 cut(s) 587, 1024
Van91I CCANNNNNTGG 1 cut(s) 279
VpaK11BI GGWCC 2 cut(s) 32, 81
XceI RCATGY 1 cut(s) 875
XmaJI CCTAGG 1 cut(s) 761
XmnI GAANNNNTTC 1 cut(s) 244
XspI CTAG 3 cut(s) 501, 653, 762
ZraI GACGTC 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.