Rmu_sc0000298.1_g000003

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000298.1
OG0000109
Physical Location & Seq
Forward (+)
13491 .. 14675
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000298.1_g000003.1.cds

Sequence Viewer

Length: 1098 bp
atgtttgctttggtcgtgtatgacagttgctgtgaggaggagtcggttcccatcccagtgatcccggtctgggtggaagtgcttggccttcctccaatattgatgaccattgaagctgtctccatgatcggtgcgtctctgggtcaggtccttcagttggacaaagcgaacatccgctatggcttgaaggctagggttctcatctcccatttgatcacaactccagtgaagcaagcctaccctcctatgctcttcgagtttggtacaggtaaggacatggtttctactagggtgactttccggtatgagaagatggttggtttctgcagggtatgtggcttactggaacactcagaatctggttgtgcagggtctcatgatatgtctggaactgacgtcatggctggggcgcagcatcaggccgggcttttggaggtggggggctcaaaccctaggtcaaacccgctccttgtgtttggttttgttgggttgggttcaacgtcggggtcgacgtctcaggctactgcaggattgtctatgagcagtagcgtggctactcctaatgtcaacccatccctttctagtttgattctctctgctcctggccaagctacagaggagctagcacagcaagtgacgccccctcgtcgccaagcggtgctcccgattatcccttccccaagccggcaaccggtggagaaacatgtggtcaatgggactaaaaggacggctgaggctagggaattggtggcgtacagtaagaaagcccgagcagtggttcctgttcctataactgaacatgtgagtattggtgcaaagaataagcctagggtggatgagatctacccttggaagctggggactgtttcaaataagaaagttaagaagcgtcaatttcatactgccaagaaagctttggttatggaggaagatacggcggtgtgggaggttcttgtggggaaggctgctgtggaggagatttctccaatggtaatagttgaatctgagaagactacggtagtggaggagaccgccatgggggaggctacttctatgagggcggtaattgtggatgttggggatgccccctctgcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

365

Amino Acids

38.96

Weight (kDa)

6.68

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 399, 515
AccBSI CCGCTC 1 cut(s) 466
AccI GTMKAC 1 cut(s) 509
AciI CCGC 6 cut(s) 175, 464, 656, 938, 1032, 1061
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 604
AcuI CTGAAG 1 cut(s) 137
AcyI GRCGYC 3 cut(s) 396, 512, 638
AfaI GTAC 2 cut(s) 265, 755
AfiI CCNNNNNNNGG 6 cut(s) 70, 157, 684, 691, 775, 1038
AflIII ACRYGT 2 cut(s) 703, 799
AgeI ACCGGT 1 cut(s) 691
AgsI TTSAA 5 cut(s) 113, 187, 498, 870, 1001
AjnI CCWGG 1 cut(s) 601
AluBI AGCT 5 cut(s) 116, 611, 622, 856, 914
AluI AGCT 5 cut(s) 116, 611, 622, 856, 914
Alw21I GWGCWC 1 cut(s) 663
Alw26I GTCTC 5 cut(s) 124, 141, 378, 519, 1022
AlwI GGATC 1 cut(s) 55
AlwNI CAGNNNCTG 2 cut(s) 30, 359
Ama87I CYCGRG 1 cut(s) 768
AoxI GGCC 3 cut(s) 85, 420, 604
ApeKI GCWGC 2 cut(s) 412, 965
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
AsiGI ACCGGT 1 cut(s) 691
AspA2I CCTAGG 2 cut(s) 452, 827
AspLEI GCGC 1 cut(s) 412
AspS9I GGNCC 1 cut(s) 148
AsuC2I CCSGG 2 cut(s) 65, 424
AsuHPI GGTGA 1 cut(s) 304
AsuNHI GCTAGC 1 cut(s) 622
AvaI CYCGRG 1 cut(s) 768
AvaII GGWCC 1 cut(s) 148
AvrII CCTAGG 2 cut(s) 452, 827
BaeI ACNNNNGTAYC 2 cut(s) 924, 957
BalI TGGCCA 1 cut(s) 606
BanII GRGCYC 1 cut(s) 446
BarI GAAGNNNNNNTAC 2 cut(s) 221, 253
BbsI GAAGAC 1 cut(s) 1016
Bbv12I GWGCWC 1 cut(s) 663
BbvCI CCTCAGC 1 cut(s) 732
BbvI GCAGC 2 cut(s) 424, 952
BccI CCATC 3 cut(s) 59, 307, 580
BceAI ACGGC 2 cut(s) 744, 951
BciT130I CCWGG 1 cut(s) 603
BclI TGATCA 1 cut(s) 213
BcnI CCSGG 2 cut(s) 65, 424
BcoDI GTCTC 5 cut(s) 124, 141, 378, 519, 1022
BfaI CTAG 7 cut(s) 192, 288, 453, 582, 623, 738, 828
BfmI CTRYAG 3 cut(s) 325, 525, 612
BglII AGATCT 1 cut(s) 840
BisI GCNGC 2 cut(s) 413, 966
BlnI CCTAGG 2 cut(s) 452, 827
BlsI GCNGC 2 cut(s) 414, 967
Bme1390I CCNGG 3 cut(s) 65, 424, 603
Bme18I GGWCC 1 cut(s) 148
BmeT110I CYCGRG 1 cut(s) 768
BmgT120I GGNCC 1 cut(s) 148
BmiI GGNNCC 2 cut(s) 48, 780
BmrFI CCNGG 3 cut(s) 65, 424, 603
BmrI ACTGGG 1 cut(s) 50
BmsI GCATC 2 cut(s) 424, 1072
BmtI GCTAGC 1 cut(s) 626
BmuI ACTGGG 1 cut(s) 50
BpiI GAAGAC 1 cut(s) 1016
BpmI CTGGAG 1 cut(s) 207
Bpu10I CCTNAGC 1 cut(s) 732
BpuMI CCSGG 2 cut(s) 65, 424
BsaHI GRCGYC 3 cut(s) 396, 512, 638
BsaI GGTCTC 2 cut(s) 378, 1022
BsaJI CCNNGG 4 cut(s) 452, 827, 848, 1035
BsaWI WCCGGW 2 cut(s) 300, 691
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 157, 684, 691, 775, 1038
Bse118I RCCGGY 2 cut(s) 684, 691
Bse1I ACTGG 3 cut(s) 56, 224, 348
BseBI CCWGG 1 cut(s) 603
BseDI CCNNGG 4 cut(s) 452, 827, 848, 1035
BseGI GGATG 6 cut(s) 51, 171, 572, 841, 1078, 1087
BseLI CCNNNNNNNGG 6 cut(s) 70, 157, 684, 691, 775, 1038
BseMII CTCAG 4 cut(s) 366, 530, 723, 996
BseNI ACTGG 3 cut(s) 56, 224, 348
BseRI GAGGAG 5 cut(s) 50, 53, 632, 989, 1040
BseXI GCAGC 2 cut(s) 424, 952
BseYI CCCAGC 2 cut(s) 404, 856
BsgI GTGCAG 1 cut(s) 387
BshFI GGCC 3 cut(s) 87, 422, 606
BshTI ACCGGT 1 cut(s) 691
BsiHKAI GWGCWC 1 cut(s) 663
BsiHKCI CYCGRG 1 cut(s) 768
BsiSI CCGG 5 cut(s) 65, 301, 423, 685, 692
BslFI GGGAC 2 cut(s) 730, 874
BslI CCNNNNNNNGG 6 cut(s) 70, 157, 684, 691, 775, 1038
BsmAI GTCTC 5 cut(s) 124, 141, 378, 519, 1022
BsmBI CGTCTC 2 cut(s) 141, 519
BsmFI GGGAC 2 cut(s) 730, 874
BsnI GGCC 3 cut(s) 87, 422, 606
Bso31I GGTCTC 2 cut(s) 378, 1022
BsoBI CYCGRG 1 cut(s) 768
Bsp1286I GDGCHC 2 cut(s) 446, 663
Bsp143I GATC 4 cut(s) 60, 126, 213, 840
Bsp19I CCATGG 1 cut(s) 1035
BspACI CCGC 6 cut(s) 175, 464, 656, 938, 1032, 1061
BspANI GGCC 3 cut(s) 87, 422, 606
BspCNI CTCAG 4 cut(s) 365, 529, 724, 997
BspHI TCATGA 1 cut(s) 376
BspLI GGNNCC 2 cut(s) 48, 780
BspMAI CTGCAG 2 cut(s) 329, 529
BspOI GCTAGC 1 cut(s) 626
BspPI GGATC 1 cut(s) 55
BspQI GCTCTTC 1 cut(s) 257
BspTNI GGTCTC 2 cut(s) 378, 1022
BsrBI CCGCTC 1 cut(s) 466
BsrFI RCCGGY 2 cut(s) 684, 691
BsrI ACTGG 3 cut(s) 56, 224, 348
BssAI RCCGGY 2 cut(s) 684, 691
BssECI CCNNGG 4 cut(s) 452, 827, 848, 1035
BssMI GATC 4 cut(s) 60, 126, 213, 840
BssNI GRCGYC 3 cut(s) 396, 512, 638
BssT1I CCWWGG 4 cut(s) 452, 827, 848, 1035
Bst2UI CCWGG 1 cut(s) 603
Bst4CI ACNGT 4 cut(s) 26, 758, 865, 1018
Bst6I CTCTTC 1 cut(s) 257
BstACI GRCGYC 3 cut(s) 396, 512, 638
BstC8I GCNNGC 3 cut(s) 234, 624, 686
BstDEI CTNAG 4 cut(s) 352, 516, 732, 1005
BstDSI CCRYGG 1 cut(s) 1035
BstF5I GGATG 6 cut(s) 51, 171, 572, 841, 1078, 1087
BstHHI GCGC 1 cut(s) 412
BstKTI GATC 4 cut(s) 63, 129, 216, 843
BstMAI GTCTC 5 cut(s) 124, 141, 378, 519, 1022
BstMBI GATC 4 cut(s) 60, 126, 213, 840
BstMWI GCNNNNNNNGC 4 cut(s) 628, 637, 911, 1091
BstNI CCWGG 1 cut(s) 603
BstNSI RCATGY 2 cut(s) 707, 803
BstSCI CCNGG 3 cut(s) 63, 422, 601
BstSFI CTRYAG 3 cut(s) 325, 525, 612
BstV1I GCAGC 2 cut(s) 424, 952
BstV2I GAAGAC 1 cut(s) 1016
BstX2I RGATCY 1 cut(s) 840
BstYI RGATCY 1 cut(s) 840
BsuRI GGCC 3 cut(s) 87, 422, 606
BtgI CCRYGG 1 cut(s) 1035
BtsCI GGATG 6 cut(s) 51, 171, 572, 841, 1078, 1087
BtsI GCAGTG 1 cut(s) 780
BtsIMutI CAGTG 3 cut(s) 63, 231, 780
Cac8I GCNNGC 3 cut(s) 234, 624, 686
CaiI CAGNNNCTG 2 cut(s) 30, 359
CciI TCATGA 1 cut(s) 376
CfoI GCGC 1 cut(s) 412
Cfr10I RCCGGY 2 cut(s) 684, 691
Cfr13I GGNCC 1 cut(s) 148
CseI GACGC 3 cut(s) 123, 646, 878
Csp6I GTAC 2 cut(s) 264, 754
CspAI ACCGGT 1 cut(s) 691
CviAII CATG 7 cut(s) 124, 277, 377, 400, 704, 800, 1036
CviQI GTAC 2 cut(s) 264, 754
DdeI CTNAG 4 cut(s) 352, 516, 732, 1005
DpnI GATC 4 cut(s) 62, 128, 215, 842
DpnII GATC 4 cut(s) 60, 126, 213, 840
EaeI YGGCCR 1 cut(s) 604
Eam1104I CTCTTC 1 cut(s) 257
EarI CTCTTC 1 cut(s) 257
Eco130I CCWWGG 4 cut(s) 452, 827, 848, 1035
Eco24I GRGCYC 1 cut(s) 446
Eco31I GGTCTC 2 cut(s) 378, 1022
Eco47I GGWCC 1 cut(s) 148
Eco57I CTGAAG 1 cut(s) 137
Eco88I CYCGRG 1 cut(s) 768
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 1 cut(s) 601
EcoT14I CCWWGG 4 cut(s) 452, 827, 848, 1035
EcoT38I GRGCYC 1 cut(s) 446
ErhI CCWWGG 4 cut(s) 452, 827, 848, 1035
Esp3I CGTCTC 2 cut(s) 141, 519
FaeI CATG 7 cut(s) 127, 280, 380, 403, 707, 803, 1039
FaqI GGGAC 2 cut(s) 730, 874
FatI CATG 7 cut(s) 123, 276, 376, 399, 703, 799, 1035
FauI CCCGC 1 cut(s) 471
FbaI TGATCA 1 cut(s) 213
FblI GTMKAC 1 cut(s) 509
Fnu4HI GCNGC 2 cut(s) 413, 966
FokI GGATG 6 cut(s) 38, 158, 559, 848, 1085, 1094
FriOI GRGCYC 1 cut(s) 446
Fsp4HI GCNGC 2 cut(s) 413, 966
FspBI CTAG 7 cut(s) 192, 288, 453, 582, 623, 738, 828
GlaI GCGC 1 cut(s) 411
GluI GCNGC 2 cut(s) 413, 966
GsaI CCCAGC 2 cut(s) 408, 860
GsuI CTGGAG 1 cut(s) 207
HaeIII GGCC 3 cut(s) 87, 422, 606
HapII CCGG 5 cut(s) 65, 301, 423, 685, 692
HgaI GACGC 3 cut(s) 123, 646, 878
HhaI GCGC 1 cut(s) 412
Hin1I GRCGYC 3 cut(s) 396, 512, 638
Hin1II CATG 7 cut(s) 127, 280, 380, 403, 707, 803, 1039
Hin6I GCGC 1 cut(s) 410
HinP1I GCGC 1 cut(s) 410
HincII GTYRAC 2 cut(s) 510, 568
HindII GTYRAC 2 cut(s) 510, 568
HindIII AAGCTT 1 cut(s) 912
HinfI GANTC 4 cut(s) 41, 356, 589, 1001
HpaII CCGG 5 cut(s) 65, 301, 423, 685, 692
HphI GGTGA 1 cut(s) 304
Hpy166II GTNNAC 2 cut(s) 510, 568
Hpy188I TCNGA 2 cut(s) 355, 1006
Hpy188III TCNNGA 3 cut(s) 377, 387, 664
Hpy8I GTNNAC 2 cut(s) 510, 568
Hpy99I CGWCG 3 cut(s) 505, 514, 651
HpyAV CCTTC 5 cut(s) 98, 161, 181, 684, 955
HpyCH4III ACNGT 4 cut(s) 26, 758, 865, 1018
HpyCH4IV ACGT 3 cut(s) 396, 500, 512
HpyCH4V TGCA 4 cut(s) 327, 368, 527, 815
HpyF10VI GCNNNNNNNGC 4 cut(s) 628, 637, 911, 1091
HpyF3I CTNAG 4 cut(s) 352, 516, 732, 1005
HpySE526I ACGT 3 cut(s) 396, 500, 512
Hsp92I GRCGYC 3 cut(s) 396, 512, 638
Hsp92II CATG 7 cut(s) 127, 280, 380, 403, 707, 803, 1039
HspAI GCGC 1 cut(s) 410
KroI GCCGGC 1 cut(s) 684
KroNI GCCGGC 1 cut(s) 686
Ksp22I TGATCA 1 cut(s) 213
Kzo9I GATC 4 cut(s) 60, 126, 213, 840
LguI GCTCTTC 1 cut(s) 257
LmnI GCTCC 4 cut(s) 471, 604, 619, 666
Lsp1109I GCAGC 2 cut(s) 424, 952
LweI GCATC 2 cut(s) 424, 1072
MaeI CTAG 7 cut(s) 192, 288, 453, 582, 623, 738, 828
MaeII ACGT 3 cut(s) 396, 500, 512
MaeIII GTNAC 2 cut(s) 292, 634
MalI GATC 4 cut(s) 62, 128, 215, 842
MbiI CCGCTC 1 cut(s) 466
MboI GATC 4 cut(s) 60, 126, 213, 840
MboII GAAGA 4 cut(s) 244, 322, 941, 1021
MflI RGATCY 1 cut(s) 840
MhlI GDGCHC 2 cut(s) 446, 663
MlsI TGGCCA 1 cut(s) 606
MluCI AATT 3 cut(s) 743, 893, 1065
MluNI TGGCCA 1 cut(s) 606
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 1 cut(s) 138
Mox20I TGGCCA 1 cut(s) 606
MroNI GCCGGC 1 cut(s) 684
MscI TGGCCA 1 cut(s) 606
MseI TTAA 1 cut(s) 882
MslI CAYNNNNRTG 1 cut(s) 56
Msp20I TGGCCA 1 cut(s) 606
MspI CCGG 5 cut(s) 65, 301, 423, 685, 692
MspR9I CCNGG 3 cut(s) 65, 424, 603
MvaI CCWGG 1 cut(s) 603
MwoI GCNNNNNNNGC 4 cut(s) 628, 637, 911, 1091
NaeI GCCGGC 1 cut(s) 686
NciI CCSGG 2 cut(s) 65, 424
NcoI CCATGG 1 cut(s) 1035
NdeII GATC 4 cut(s) 60, 126, 213, 840
NgoMIV GCCGGC 1 cut(s) 684
NheI GCTAGC 1 cut(s) 622
NlaIII CATG 7 cut(s) 127, 280, 380, 403, 707, 803, 1039
NlaIV GGNNCC 2 cut(s) 48, 780
NmuCI GTSAC 2 cut(s) 292, 634
NspI RCATGY 2 cut(s) 707, 803
PagI TCATGA 1 cut(s) 376
PciI ACATGT 2 cut(s) 703, 799
PciSI GCTCTTC 1 cut(s) 257
PcsI WCGNNNNNNNCGW 2 cut(s) 506, 509
PdiI GCCGGC 1 cut(s) 686
PfeI GAWTC 3 cut(s) 356, 589, 1001
PinAI ACCGGT 1 cut(s) 691
PkrI GCNGC 2 cut(s) 414, 967
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
PpuMI RGGWCCY 1 cut(s) 148
PscI ACATGT 2 cut(s) 703, 799
Psp5II RGGWCCY 1 cut(s) 148
Psp6I CCWGG 1 cut(s) 601
PspFI CCCAGC 2 cut(s) 404, 856
PspGI CCWGG 1 cut(s) 601
PspN4I GGNNCC 2 cut(s) 48, 780
PspPI GGNCC 1 cut(s) 148
PspPPI RGGWCCY 1 cut(s) 148
PstI CTGCAG 2 cut(s) 329, 529
PstNI CAGNNNCTG 2 cut(s) 30, 359
PsuI RGATCY 1 cut(s) 840
RsaI GTAC 2 cut(s) 265, 755
RsaNI GTAC 2 cut(s) 264, 754
RseI CAYNNNNRTG 1 cut(s) 56
SalI GTCGAC 1 cut(s) 508
SapI GCTCTTC 1 cut(s) 257
SaqAI TTAA 1 cut(s) 882
SatI GCNGC 2 cut(s) 413, 966
Sau3AI GATC 4 cut(s) 60, 126, 213, 840
Sau96I GGNCC 1 cut(s) 148
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 3 cut(s) 65, 424, 603
SduI GDGCHC 2 cut(s) 446, 663
SfaNI GCATC 2 cut(s) 424, 1072
SfcI CTRYAG 3 cut(s) 325, 525, 612
SinI GGWCC 1 cut(s) 148
SmiMI CAYNNNNRTG 1 cut(s) 56
Sse9I AATT 3 cut(s) 743, 893, 1065
SsiI CCGC 6 cut(s) 175, 464, 656, 938, 1032, 1061
SspI AATATT 1 cut(s) 99
SspMI CTAG 7 cut(s) 192, 288, 453, 582, 623, 738, 828
StyD4I CCNGG 3 cut(s) 63, 422, 601
StyI CCWWGG 4 cut(s) 452, 827, 848, 1035
TaaI ACNGT 4 cut(s) 26, 758, 865, 1018
TaiI ACGT 3 cut(s) 399, 503, 515
TaqI TCGA 2 cut(s) 255, 509
TasI AATT 3 cut(s) 743, 893, 1065
TfiI GAWTC 3 cut(s) 356, 589, 1001
Tru1I TTAA 1 cut(s) 882
Tru9I TTAA 1 cut(s) 882
TscAI CASTG 3 cut(s) 63, 231, 780
TseFI GTSAC 2 cut(s) 292, 634
TseI GCWGC 2 cut(s) 412, 965
Tsp45I GTSAC 2 cut(s) 292, 634
TspDTI ATGAA 1 cut(s) 887
TspRI CASTG 3 cut(s) 63, 231, 780
VpaK11BI GGWCC 1 cut(s) 148
XceI RCATGY 2 cut(s) 707, 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 913
XmaJI CCTAGG 2 cut(s) 452, 827
XmiI GTMKAC 1 cut(s) 509
XspI CTAG 7 cut(s) 192, 288, 453, 582, 623, 738, 828
ZraI GACGTC 2 cut(s) 397, 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.