Rmu_sc0012355.1_g000001

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012355.1
OG0000109
Physical Location & Seq
Forward (+)
3792 .. 6035
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012355.1_g000001.1.cds

Sequence Viewer

Length: 1752 bp
atgtttctaagtaccaccgattccaccgatctatcttcgtcttcaataactatcactacttttgctcttcggagcattacccttagctgctttgttccgcaattttcccccgagcagtttacctttgtggttcctgcttatactacctttccgtggttctatgtgttcttttcggtgcttgtttacttcggactacccagtgatagtcggagggacgagttaggtgcctctcggtgttggatcctggtcttatcagcgtgttcctttggaaggattggctggctctgctacctgcttctgcggggttgtgttcctcttgcggcggtgtctatcgacatggaggcttctggactggagcttgttcttggaatgggctttggcttcttcgcatcttcttctcttggcatcctcctctcttccaccatggttgatcacgttaccgctcatctggcagccgcattggcgatctctgaagatgggcggacatcctttggtccgactggtgctactgctgtgtcttctcagcacttcgcggtggggagactgctctccgttacggccaagcttcgagctgatcctaaggctttcttggggactatgacctccttgtgggggcttggcaatcgtctctctgcacgagcagtcaaggaccgatttgtctttcagttttctaaactagaggaccgtcaaaggacggttgagggagggccgtggttttttggaaagtgggcgctggctatggctgagttcgatggtttgaaagatctgacgcaagtgtcgatctcttcttttccaatatgggtggagattatgggtctaccgccggccctagttactgagggtgctgtggcactcattggcgctaccttaggggagaccgtgcatctggataaagctgggattcgaaagggtacggcggctaaggtttgtatccgtcatgttctgtcttctccggtgaaacaagttttccctccatccacctttgatttcacctctagggcatctgcgacggtcaggttccgctatgggaggctcgttggattctgtcgggtttatggtatgatggaacatcagcggtcgggttgcggtggcccttcggaagcgctgcaggtctccgttggtgctaaccctaaccctagcttggtggggtctgcagctccgagtcttgtggaggttttggctcagtccatagcgcctaatctatttacctccgtggcaaagtcgacttcactacagggtttctcggtcgccgctctggtggcccaactggccaaaatcccatctccggttcaaggggccagtgcgcccatgcaaactgctgtagtggtcccatctctcagtgggaagaagagaacggcctcttcggccctcatgcaatattccaagcgtaagaagacaattgagaaggctcctcaggtggagggcgttgaccttggttttgaacttgaattggctctgaagagtaagaacggggttctcttagtttctccggcaaagaaggctaaaatgggacttcctcctgggcgtaagaacaatccaaaacctatgggtttgaaacctaagaagctgatttctgaggatccaaaacctcgaaggaagagaagttttaaggcagtggacaatccttcctctggtgaaggcagctcgggtttggttgcagaaacacccacccttactgatagggaggttcacatgtcttctggcaaaggttctgagcctgaggaacgcactcccatgggtgccctctattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

583

Amino Acids

62.24

Weight (kDa)

9.6

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 656, 775
Acc36I ACCTGC 2 cut(s) 300, 1099
AccB1I GGYRCC 2 cut(s) 224, 1739
AccBSI CCGCTC 2 cut(s) 443, 1253
AccI GTMKAC 2 cut(s) 817, 1223
AccII CGCG 1 cut(s) 533
AclWI GGATC 5 cut(s) 235, 248, 569, 1574, 1587
AcoI YGGCCR 2 cut(s) 558, 1269
AcuI CTGAAG 2 cut(s) 492, 1478
AfaI GTAC 2 cut(s) 13, 913
AfeI AGCGCT 1 cut(s) 1104
AfiI CCNNNNNNNGG 8 cut(s) 153, 270, 609, 612, 1141, 1285, 1292, 1631
AflIII ACRYGT 1 cut(s) 1692
AgsI TTSAA 6 cut(s) 45, 760, 1292, 1442, 1448, 1555
AjnI CCWGG 2 cut(s) 243, 1519
AluBI AGCT 9 cut(s) 87, 358, 565, 572, 896, 1140, 1157, 1567, 1644
AluI AGCT 9 cut(s) 87, 358, 565, 572, 896, 1140, 1157, 1567, 1644
Alw26I GTCTC 4 cut(s) 535, 632, 869, 1117
AlwI GGATC 5 cut(s) 235, 248, 569, 1574, 1587
Ama87I CYCGRG 2 cut(s) 110, 1645
Aor51HI AGCGCT 1 cut(s) 1104
AoxI GGCC 9 cut(s) 558, 707, 825, 1090, 1260, 1269, 1296, 1356, 1365
ApeKI GCWGC 5 cut(s) 87, 452, 1105, 1154, 1641
ArsI GACNNNNNNTTYG 2 cut(s) 1421, 1453
AspLEI GCGC 5 cut(s) 733, 863, 1105, 1195, 1306
AsuHPI GGTGA 3 cut(s) 967, 982, 1646
AsuII TTCGAA 1 cut(s) 904
AvaI CYCGRG 2 cut(s) 110, 1645
AvaII GGWCC 4 cut(s) 494, 649, 682, 1327
AxyI CCTNAGG 4 cut(s) 579, 868, 1413, 1719
BaeGI GKGCMC 1 cut(s) 1744
BalI TGGCCA 1 cut(s) 1271
BamHI GGATCC 2 cut(s) 240, 1579
BanI GGYRCC 2 cut(s) 224, 1739
BauI CACGAG 1 cut(s) 636
BbsI GAAGAC 5 cut(s) 33, 510, 939, 1400, 1689
BbvI GCAGC 5 cut(s) 74, 464, 1092, 1166, 1653
BccI CCATC 6 cut(s) 470, 746, 982, 1057, 1288, 1339
BceAI ACGGC 4 cut(s) 573, 694, 930, 1371
BcgI CGANNNNNNTGC 2 cut(s) 206, 240
BciT130I CCWGG 2 cut(s) 245, 1521
BciVI GTATCC 1 cut(s) 941
BclI TGATCA 1 cut(s) 430
BcoDI GTCTC 4 cut(s) 535, 632, 869, 1117
BfaI CTAG 4 cut(s) 677, 830, 996, 1137
BfmI CTRYAG 4 cut(s) 1106, 1152, 1232, 1320
BfoI RGCGCY 4 cut(s) 734, 864, 1106, 1196
BfuAI ACCTGC 2 cut(s) 300, 1099
BfuI GTATCC 1 cut(s) 941
BglI GCCNNNNNGGC 3 cut(s) 461, 1268, 1364
BglII AGATCT 1 cut(s) 763
BisI GCNGC 9 cut(s) 88, 321, 453, 456, 918, 1106, 1155, 1251, 1642
BlsI GCNGC 9 cut(s) 89, 322, 454, 457, 919, 1107, 1156, 1252, 1643
Bme1390I CCNGG 2 cut(s) 245, 1521
Bme18I GGWCC 4 cut(s) 494, 649, 682, 1327
BmeT110I CYCGRG 2 cut(s) 110, 1645
BmiI GGNNCC 9 cut(s) 132, 226, 242, 1019, 1297, 1329, 1410, 1581, 1741
BmrFI CCNGG 2 cut(s) 245, 1521
BmrI ACTGGG 1 cut(s) 192
BmsI GCATC 4 cut(s) 398, 414, 892, 1010
BmuI ACTGGG 1 cut(s) 192
BpiI GAAGAC 5 cut(s) 33, 510, 939, 1400, 1689
BpmI CTGGAG 1 cut(s) 374
Bpu10I CCTNAGC 2 cut(s) 83, 921
Bpu14I TTCGAA 1 cut(s) 904
BsaI GGTCTC 2 cut(s) 869, 1117
BsaJI CCNNGG 7 cut(s) 152, 423, 710, 1212, 1432, 1520, 1734
BsaWI WCCGGW 2 cut(s) 952, 1285
Bsc4I CCNNNNNNNGG 8 cut(s) 153, 270, 609, 612, 1141, 1285, 1292, 1631
Bse118I RCCGGY 1 cut(s) 823
Bse1I ACTGG 5 cut(s) 198, 357, 505, 1272, 1299
Bse21I CCTNAGG 4 cut(s) 579, 868, 1413, 1719
BseBI CCWGG 2 cut(s) 245, 1521
BseDI CCNNGG 7 cut(s) 152, 423, 710, 1212, 1432, 1520, 1734
BseGI GGATG 3 cut(s) 405, 485, 974
BseLI CCNNNNNNNGG 8 cut(s) 153, 270, 609, 612, 1141, 1285, 1292, 1631
BseMII CTCAG 9 cut(s) 536, 735, 828, 1196, 1351, 1427, 1566, 1704, 1710
BseNI ACTGG 5 cut(s) 198, 357, 505, 1272, 1299
BseRI GAGGAG 2 cut(s) 401, 1401
BseSI GKGCMC 1 cut(s) 1744
BseXI GCAGC 5 cut(s) 74, 464, 1092, 1166, 1653
BseYI CCCAGC 1 cut(s) 896
BsgI GTGCAG 1 cut(s) 618
Bsh1236I CGCG 1 cut(s) 533
Bsh1285I CGRYCG 2 cut(s) 1079, 1248
BshFI GGCC 9 cut(s) 560, 709, 827, 1092, 1262, 1271, 1298, 1358, 1367
BshNI GGYRCC 2 cut(s) 224, 1739
BsiEI CGRYCG 2 cut(s) 1079, 1248
BsiHKCI CYCGRG 2 cut(s) 110, 1645
BsiSI CCGG 4 cut(s) 824, 953, 1286, 1490
BslFI GGGAC 4 cut(s) 227, 607, 1313, 1524
BslI CCNNNNNNNGG 8 cut(s) 153, 270, 609, 612, 1141, 1285, 1292, 1631
BsmAI GTCTC 4 cut(s) 535, 632, 869, 1117
BsmBI CGTCTC 1 cut(s) 632
BsmFI GGGAC 4 cut(s) 227, 607, 1313, 1524
BsnI GGCC 9 cut(s) 560, 709, 827, 1092, 1262, 1271, 1298, 1358, 1367
Bso31I GGTCTC 2 cut(s) 869, 1117
BsoBI CYCGRG 2 cut(s) 110, 1645
Bsp119I TTCGAA 1 cut(s) 904
Bsp1286I GDGCHC 1 cut(s) 1744
Bsp143I GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
Bsp19I CCATGG 2 cut(s) 423, 1734
BspANI GGCC 9 cut(s) 560, 709, 827, 1092, 1262, 1271, 1298, 1358, 1367
BspCNI CTCAG 9 cut(s) 535, 736, 829, 1195, 1350, 1426, 1567, 1705, 1711
BspFNI CGCG 1 cut(s) 533
BspLI GGNNCC 9 cut(s) 132, 226, 242, 1019, 1297, 1329, 1410, 1581, 1741
BspMAI CTGCAG 2 cut(s) 1110, 1156
BspMI ACCTGC 2 cut(s) 300, 1099
BspPI GGATC 5 cut(s) 235, 248, 569, 1574, 1587
BspQI GCTCTTC 1 cut(s) 72
BspT104I TTCGAA 1 cut(s) 904
BspT107I GGYRCC 2 cut(s) 224, 1739
BspTNI GGTCTC 2 cut(s) 869, 1117
BsrBI CCGCTC 2 cut(s) 443, 1253
BsrFI RCCGGY 1 cut(s) 823
BsrI ACTGG 5 cut(s) 198, 357, 505, 1272, 1299
BssAI RCCGGY 1 cut(s) 823
BssECI CCNNGG 7 cut(s) 152, 423, 710, 1212, 1432, 1520, 1734
BssMI GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
BssSI CACGAG 1 cut(s) 636
BssT1I CCWWGG 3 cut(s) 423, 1432, 1734
Bst2BI CACGAG 1 cut(s) 636
Bst2UI CCWGG 2 cut(s) 245, 1521
Bst4CI ACNGT 4 cut(s) 686, 697, 880, 1012
Bst6I CTCTTC 7 cut(s) 72, 421, 790, 1343, 1366, 1454, 1592
BstBI TTCGAA 1 cut(s) 904
BstC8I GCNNGC 3 cut(s) 281, 735, 825
BstDSI CCRYGG 5 cut(s) 152, 423, 710, 1212, 1734
BstENI CCTNNNNNAGG 1 cut(s) 268
BstF5I GGATG 3 cut(s) 405, 485, 974
BstFNI CGCG 1 cut(s) 533
BstH2I RGCGCY 4 cut(s) 734, 864, 1106, 1196
BstHHI GCGC 5 cut(s) 733, 863, 1105, 1195, 1306
BstKTI GATC 8 cut(s) 31, 243, 433, 468, 577, 766, 783, 1582
BstMAI GTCTC 4 cut(s) 535, 632, 869, 1117
BstMBI GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
BstMCI CGRYCG 2 cut(s) 1079, 1248
BstMWI GCNNNNNNNGC 7 cut(s) 285, 449, 461, 1259, 1268, 1364, 1499
BstNI CCWGG 2 cut(s) 245, 1521
BstNSI RCATGY 1 cut(s) 1696
BstSCI CCNGG 2 cut(s) 243, 1519
BstSFI CTRYAG 4 cut(s) 1106, 1152, 1232, 1320
BstSLI GKGCMC 1 cut(s) 1744
BstUI CGCG 1 cut(s) 533
BstV1I GCAGC 5 cut(s) 74, 464, 1092, 1166, 1653
BstV2I GAAGAC 5 cut(s) 33, 510, 939, 1400, 1689
BstX2I RGATCY 3 cut(s) 240, 763, 1579
BstYI RGATCY 3 cut(s) 240, 763, 1579
Bsu36I CCTNAGG 4 cut(s) 579, 868, 1413, 1719
BsuI GTATCC 1 cut(s) 941
BsuRI GGCC 9 cut(s) 560, 709, 827, 1092, 1262, 1271, 1298, 1358, 1367
BtgI CCRYGG 5 cut(s) 152, 423, 710, 1212, 1734
BtsCI GGATG 3 cut(s) 405, 485, 974
BtsI GCAGTG 1 cut(s) 1620
BtsIMutI CAGTG 4 cut(s) 205, 1306, 1345, 1620
BveI ACCTGC 2 cut(s) 300, 1099
Cac8I GCNNGC 3 cut(s) 281, 735, 825
CfoI GCGC 5 cut(s) 733, 863, 1105, 1195, 1306
Cfr10I RCCGGY 1 cut(s) 823
CseI GACGC 1 cut(s) 778
Csp6I GTAC 2 cut(s) 12, 912
CspCI CAANNNNNGTGG 4 cut(s) 409, 444, 783, 818
CviAII CATG 7 cut(s) 337, 424, 938, 1309, 1372, 1693, 1735
CviQI GTAC 2 cut(s) 12, 912
DpnI GATC 8 cut(s) 30, 242, 432, 467, 576, 765, 782, 1581
DpnII GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
DrdI GACNNNNNNGTC 2 cut(s) 656, 775
DseDI GACNNNNNNGTC 2 cut(s) 656, 775
EaeI YGGCCR 2 cut(s) 558, 1269
Eam1104I CTCTTC 7 cut(s) 72, 421, 790, 1343, 1366, 1454, 1592
EarI CTCTTC 7 cut(s) 72, 421, 790, 1343, 1366, 1454, 1592
EciI GGCGGA 1 cut(s) 496
Eco130I CCWWGG 3 cut(s) 423, 1432, 1734
Eco31I GGTCTC 2 cut(s) 869, 1117
Eco47I GGWCC 4 cut(s) 494, 649, 682, 1327
Eco47III AGCGCT 1 cut(s) 1104
Eco57I CTGAAG 2 cut(s) 492, 1478
Eco81I CCTNAGG 4 cut(s) 579, 868, 1413, 1719
Eco88I CYCGRG 2 cut(s) 110, 1645
EcoNI CCTNNNNNAGG 1 cut(s) 268
EcoRII CCWGG 2 cut(s) 243, 1519
EcoT14I CCWWGG 3 cut(s) 423, 1432, 1734
ErhI CCWWGG 3 cut(s) 423, 1432, 1734
Esp3I CGTCTC 1 cut(s) 632
FaeI CATG 7 cut(s) 340, 427, 941, 1312, 1375, 1696, 1738
FalI AAGNNNNNCTT 2 cut(s) 572, 604
FaqI GGGAC 4 cut(s) 227, 607, 1313, 1524
FatI CATG 7 cut(s) 336, 423, 937, 1308, 1371, 1692, 1734
FauI CCCGC 1 cut(s) 294
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 2 cut(s) 817, 1223
Fnu4HI GCNGC 9 cut(s) 88, 321, 453, 456, 918, 1106, 1155, 1251, 1642
FokI GGATG 3 cut(s) 392, 472, 961
Fsp4HI GCNGC 9 cut(s) 88, 321, 453, 456, 918, 1106, 1155, 1251, 1642
FspBI CTAG 4 cut(s) 677, 830, 996, 1137
GlaI GCGC 5 cut(s) 732, 862, 1104, 1194, 1305
GluI GCNGC 9 cut(s) 88, 321, 453, 456, 918, 1106, 1155, 1251, 1642
GsaI CCCAGC 1 cut(s) 900
GsuI CTGGAG 1 cut(s) 374
HaeII RGCGCY 4 cut(s) 734, 864, 1106, 1196
HaeIII GGCC 9 cut(s) 560, 709, 827, 1092, 1262, 1271, 1298, 1358, 1367
HapII CCGG 4 cut(s) 824, 953, 1286, 1490
HgaI GACGC 1 cut(s) 778
HhaI GCGC 5 cut(s) 733, 863, 1105, 1195, 1306
Hin1II CATG 7 cut(s) 340, 427, 941, 1312, 1375, 1696, 1738
Hin6I GCGC 5 cut(s) 731, 861, 1103, 1193, 1304
HinP1I GCGC 5 cut(s) 731, 861, 1103, 1193, 1304
HincII GTYRAC 2 cut(s) 1224, 1429
HindII GTYRAC 2 cut(s) 1224, 1429
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 4 cut(s) 20, 901, 1041, 1162
HpaII CCGG 4 cut(s) 824, 953, 1286, 1490
HphI GGTGA 3 cut(s) 967, 982, 1646
Hpy166II GTNNAC 7 cut(s) 120, 184, 818, 1224, 1429, 1618, 1690
Hpy188III TCNNGA 2 cut(s) 348, 887
Hpy8I GTNNAC 7 cut(s) 120, 184, 818, 1224, 1429, 1618, 1690
Hpy99I CGWCG 1 cut(s) 1012
HpyAV CCTTC 7 cut(s) 264, 1104, 1399, 1492, 1587, 1631, 1635
HpyCH4III ACNGT 4 cut(s) 686, 697, 880, 1012
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 7 cut(s) 635, 883, 1108, 1154, 1312, 1375, 1658
HpyF10VI GCNNNNNNNGC 7 cut(s) 285, 449, 461, 1259, 1268, 1364, 1499
HpySE526I ACGT 1 cut(s) 435
Hsp92II CATG 7 cut(s) 340, 427, 941, 1312, 1375, 1696, 1738
HspAI GCGC 5 cut(s) 731, 861, 1103, 1193, 1304
KroI GCCGGC 1 cut(s) 823
KroNI GCCGGC 1 cut(s) 825
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
LguI GCTCTTC 1 cut(s) 72
LmnI GCTCC 4 cut(s) 72, 355, 1162, 1414
Lsp1109I GCAGC 5 cut(s) 74, 464, 1092, 1166, 1653
LweI GCATC 4 cut(s) 398, 414, 892, 1010
MaeI CTAG 4 cut(s) 677, 830, 996, 1137
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 3 cut(s) 436, 553, 832
MalI GATC 8 cut(s) 30, 242, 432, 467, 576, 765, 782, 1581
MbiI CCGCTC 2 cut(s) 443, 1253
MboI GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
MfeI CAATTG 1 cut(s) 1398
MflI RGATCY 3 cut(s) 240, 763, 1579
MhlI GDGCHC 1 cut(s) 1744
MlsI TGGCCA 1 cut(s) 1271
MluCI AATT 3 cut(s) 101, 1398, 1448
MluNI TGGCCA 1 cut(s) 1271
MlyI GAGTC 1 cut(s) 1171
MmeI TCCRAC 4 cut(s) 188, 218, 521, 1018
Mox20I TGGCCA 1 cut(s) 1271
MroNI GCCGGC 1 cut(s) 823
MscI TGGCCA 1 cut(s) 1271
MseI TTAA 1 cut(s) 1608
MslI CAYNNNNRTG 1 cut(s) 1733
Msp20I TGGCCA 1 cut(s) 1271
MspA1I CMGCKG 1 cut(s) 1075
MspI CCGG 4 cut(s) 824, 953, 1286, 1490
MspR9I CCNGG 2 cut(s) 245, 1521
MunI CAATTG 1 cut(s) 1398
MvaI CCWGG 2 cut(s) 245, 1521
MvnI CGCG 1 cut(s) 533
MwoI GCNNNNNNNGC 7 cut(s) 285, 449, 461, 1259, 1268, 1364, 1499
NaeI GCCGGC 1 cut(s) 825
NcoI CCATGG 2 cut(s) 423, 1734
NdeII GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
NgoMIV GCCGGC 1 cut(s) 823
NlaIII CATG 7 cut(s) 340, 427, 941, 1312, 1375, 1696, 1738
NlaIV GGNNCC 9 cut(s) 132, 226, 242, 1019, 1297, 1329, 1410, 1581, 1741
NspI RCATGY 1 cut(s) 1696
NspV TTCGAA 1 cut(s) 904
PciI ACATGT 1 cut(s) 1692
PciSI GCTCTTC 1 cut(s) 72
PcsI WCGNNNNNNNCGW 1 cut(s) 776
PdiI GCCGGC 1 cut(s) 825
PfeI GAWTC 3 cut(s) 20, 901, 1041
PkrI GCNGC 9 cut(s) 89, 322, 454, 457, 919, 1107, 1156, 1252, 1643
PleI GAGTC 1 cut(s) 1170
PpsI GAGTC 1 cut(s) 1170
PscI ACATGT 1 cut(s) 1692
Psp6I CCWGG 2 cut(s) 243, 1519
PspFI CCCAGC 1 cut(s) 896
PspGI CCWGG 2 cut(s) 243, 1519
PspN4I GGNNCC 9 cut(s) 132, 226, 242, 1019, 1297, 1329, 1410, 1581, 1741
PstI CTGCAG 2 cut(s) 1110, 1156
PsuI RGATCY 3 cut(s) 240, 763, 1579
RsaI GTAC 2 cut(s) 13, 913
RsaNI GTAC 2 cut(s) 12, 912
RseI CAYNNNNRTG 1 cut(s) 1733
SalI GTCGAC 1 cut(s) 1222
SapI GCTCTTC 1 cut(s) 72
SaqAI TTAA 1 cut(s) 1608
SatI GCNGC 9 cut(s) 88, 321, 453, 456, 918, 1106, 1155, 1251, 1642
Sau3AI GATC 8 cut(s) 28, 240, 430, 465, 574, 763, 780, 1579
SchI GAGTC 1 cut(s) 1171
ScrFI CCNGG 2 cut(s) 245, 1521
SduI GDGCHC 1 cut(s) 1744
SfaNI GCATC 4 cut(s) 398, 414, 892, 1010
SfcI CTRYAG 4 cut(s) 1106, 1152, 1232, 1320
SfiI GGCCNNNNNGGCC 2 cut(s) 1268, 1364
SfuI TTCGAA 1 cut(s) 904
SinI GGWCC 4 cut(s) 494, 649, 682, 1327
SmiMI CAYNNNNRTG 1 cut(s) 1733
Sse9I AATT 3 cut(s) 101, 1398, 1448
SspI AATATT 1 cut(s) 1379
SspMI CTAG 4 cut(s) 677, 830, 996, 1137
StyD4I CCNGG 2 cut(s) 243, 1519
StyI CCWWGG 3 cut(s) 423, 1432, 1734
TaaI ACNGT 4 cut(s) 686, 697, 880, 1012
TaiI ACGT 1 cut(s) 438
TaqI TCGA 7 cut(s) 333, 568, 750, 779, 904, 1223, 1591
TaqII GACCGA 2 cut(s) 666, 1234
TasI AATT 3 cut(s) 101, 1398, 1448
TauI GCSGC 4 cut(s) 323, 458, 920, 1253
TfiI GAWTC 3 cut(s) 20, 901, 1041
Tru1I TTAA 1 cut(s) 1608
Tru9I TTAA 1 cut(s) 1608
TscAI CASTG 4 cut(s) 205, 1306, 1345, 1620
TseI GCWGC 5 cut(s) 87, 452, 1105, 1154, 1641
TspGWI ACGGA 5 cut(s) 141, 541, 923, 1105, 1201
TspRI CASTG 4 cut(s) 205, 1306, 1345, 1620
VpaK11BI GGWCC 4 cut(s) 494, 649, 682, 1327
XagI CCTNNNNNAGG 1 cut(s) 268
XceI RCATGY 1 cut(s) 1696
XmiI GTMKAC 2 cut(s) 817, 1223
XspI CTAG 4 cut(s) 677, 830, 996, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.