FvH4_4g05731

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000109
Physical Location & Seq
Forward (+)
5107865 .. 5109187
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g05731.t1

Sequence Viewer

Length: 1215 bp
ATGGTTGATGAGGTCTCCCGTTTAGCTGCTGCGATGGCTATCACGGAGAATGGCAGAGTTTCCATCGGCGCAGCCGGTGCGGTGGTGTTCTCTGGTCACTCTTATGCAGTGAGCAGGTTGCTGTCACCCAAAAAGAAGGTTGTGCCCAAGGCGTTTATGGCGACGATGGCAACTCTCTGGGATCTAAAAGGTCGGCTCCAGATCCGGGCCAATGGAGATCGTTACGGGTTGCGTTTCAATGAAGCAGCAGAGCGGAAAAAGATAGTCGAAGGTGGTCCATGGTTTTACGACAAAACCATGTTCGCTCTGTCCTTCTATGACGGACGATCTGATGTTGCAGCGGTGCCGATTCAATCTATGCCGGTGTGGGTTGAAGTGTTCGGTCTGCCGCCGGCCTTGATGACCAAGGAGGCTCTATATATGGTTGGCGCCACCCTAGGGCGGGTGATCAACCATGATCATTCGAATCTGATCTCCGGTGCAAGAGCCCGTGTGCGGCTGGAGCATGATATTCTTTCCCCGGTGAAGCAAGCGTATCCTCCTACGCGATTCGATTTTGGCGAAGGTACTGATCAAACTTCTATGTTGCTTACCTTTAAGTATGAAAGATTTTATGGCTTTTGCCGTACCTGTGGCCTTCTGGAACATAAGCCGGAGGGATGCCAAGGGCCTCCTGATATGTTAGCGGCGAGTTTGCTAGGCAATGGTGGGTTGCCAGCAGTGAGTGCTCGGGTGAAGCTTCATCAATCAGTGGAGATTACGGTCCTTTCAGGGAAAAAGCGTGATGCCTCTGTGTTGATGGAGTTGGATCTAGGGAAGAGGCCGAAATGTCCTGTGACTATGGTTGAAGCCAATTCGGCTCCTCTGGGTTCTGTGTTGGAGCTTTCTCTTCCTCATTTTGCAAGTACTCTGATTATTTCTCCTCCCAAAAAACGCAATGTTGGAAGACCGTTGGGATCGAAGAATCGTCGTAAGGAGGTGATCACTGCAGCTGCTAAAACTCTAAAGCGGAGGAGGAAGACAACTGGTTCGGTCAAACGAACCCTTGCTCTTAAGGATGGTCTTGGAGTGAGTTCGGATACCTCACCAATTCTAGACATGATGGCTATGGAGGATCCCCTTACTCTCGAGGGTGGTCTTGGAGTGAGTTCGGAGGTCTCACCAGTTCTGGATATGGTGGTAGTGGAGGATCCCGGGGCAACCTCATTTGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

405

Amino Acids

43.7

Weight (kDa)

9.54

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 54 - 104 4.6e-06 Domain of unknown function (DUF4283)
zf-CCHC_4 PF14392 193 - 222 3.1e-06 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 105
AccB1I GGYRCC 2 cut(s) 343, 428
AccBSI CCGCTC 1 cut(s) 253
AccII CGCG 1 cut(s) 547
AciI CCGC 8 cut(s) 80, 253, 341, 389, 442, 496, 686, 1009
AclWI GGATC 8 cut(s) 189, 196, 816, 964, 1109, 1122, 1184, 1197
AcyI GRCGYC 1 cut(s) 429
AfaI GTAC 3 cut(s) 568, 628, 907
AfiI CCNNNNNNNGG 5 cut(s) 205, 438, 441, 442, 495
AflII CTTAAG 1 cut(s) 1052
AgsI TTSAA 4 cut(s) 238, 353, 374, 848
AluBI AGCT 4 cut(s) 26, 739, 883, 992
AluI AGCT 4 cut(s) 26, 739, 883, 992
Alw21I GWGCWC 1 cut(s) 730
Alw26I GTCTC 2 cut(s) 19, 1162
AlwI GGATC 8 cut(s) 189, 196, 816, 964, 1109, 1122, 1184, 1197
Ama87I CYCGRG 3 cut(s) 729, 1127, 1193
AoxI GGCC 5 cut(s) 207, 393, 634, 668, 821
ApeKI GCWGC 7 cut(s) 26, 29, 71, 245, 338, 989, 992
ArsI GACNNNNNNTTYG 2 cut(s) 1012, 1044
AspA2I CCTAGG 1 cut(s) 436
AspLEI GCGC 2 cut(s) 71, 431
AspS9I GGNCC 4 cut(s) 207, 275, 668, 763
AsuC2I CCSGG 4 cut(s) 206, 521, 1194, 1195
AsuHPI GGTGA 7 cut(s) 117, 457, 535, 745, 991, 1077, 1152
AsuII TTCGAA 1 cut(s) 464
AvaI CYCGRG 3 cut(s) 729, 1127, 1193
AvaII GGWCC 2 cut(s) 275, 763
AvrII CCTAGG 1 cut(s) 436
BaeGI GKGCMC 1 cut(s) 147
BamHI GGATCC 2 cut(s) 1114, 1189
BanI GGYRCC 2 cut(s) 343, 428
BanII GRGCYC 1 cut(s) 490
BbsI GAAGAC 2 cut(s) 952, 1025
Bbv12I GWGCWC 1 cut(s) 730
BbvI GCAGC 7 cut(s) 13, 16, 83, 257, 350, 979, 1001
BccI CCATC 6 cut(s) 28, 71, 160, 793, 1052, 1096
BceAI ACGGC 1 cut(s) 609
BciVI GTATCC 2 cut(s) 546, 1072
BclI TGATCA 4 cut(s) 447, 457, 571, 981
BcnI CCSGG 4 cut(s) 206, 521, 1194, 1195
BcoDI GTCTC 2 cut(s) 19, 1162
BfaI CTAG 4 cut(s) 437, 698, 812, 1094
BfmI CTRYAG 1 cut(s) 987
BfoI RGCGCY 1 cut(s) 432
BfrI CTTAAG 1 cut(s) 1052
BfuAI ACCTGC 1 cut(s) 105
BfuI GTATCC 2 cut(s) 546, 1072
BglI GCCNNNNNGGC 1 cut(s) 857
BlnI CCTAGG 1 cut(s) 436
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 4 cut(s) 206, 521, 1194, 1195
Bme18I GGWCC 2 cut(s) 275, 763
BmeT110I CYCGRG 3 cut(s) 729, 1127, 1193
BmgT120I GGNCC 4 cut(s) 207, 275, 668, 763
BmiI GGNNCC 6 cut(s) 197, 345, 430, 861, 1116, 1191
BmrFI CCNGG 4 cut(s) 206, 521, 1194, 1195
BmsI GCATC 2 cut(s) 650, 775
BpiI GAAGAC 2 cut(s) 952, 1025
BpmI CTGGAG 2 cut(s) 182, 521
Bpu14I TTCGAA 1 cut(s) 464
BpuMI CCSGG 4 cut(s) 206, 521, 1194, 1195
BsaBI GATNNNNATC 1 cut(s) 38
BsaHI GRCGYC 1 cut(s) 429
BsaI GGTCTC 2 cut(s) 19, 1162
BsaJI CCNNGG 8 cut(s) 147, 278, 405, 436, 519, 664, 1193, 1194
BsaWI WCCGGW 1 cut(s) 476
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 438, 441, 442, 495
Bse118I RCCGGY 3 cut(s) 74, 361, 391
Bse1I ACTGG 2 cut(s) 1030, 1163
Bse3DI GCAATG 2 cut(s) 709, 943
Bse8I GATNNNNATC 1 cut(s) 38
BseDI CCNNGG 8 cut(s) 147, 278, 405, 436, 519, 664, 1193, 1194
BseGI GGATG 2 cut(s) 665, 1063
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 5 cut(s) 205, 438, 441, 442, 495
BseMI GCAATG 2 cut(s) 709, 943
BseNI ACTGG 2 cut(s) 1030, 1163
BseRI GAGGAG 3 cut(s) 852, 912, 1027
BseSI GKGCMC 1 cut(s) 147
BseXI GCAGC 7 cut(s) 13, 16, 83, 257, 350, 979, 1001
Bsh1236I CGCG 1 cut(s) 547
BshFI GGCC 5 cut(s) 209, 395, 636, 670, 823
BshNI GGYRCC 2 cut(s) 343, 428
BsiHKAI GWGCWC 1 cut(s) 730
BsiHKCI CYCGRG 3 cut(s) 729, 1127, 1193
BsiSI CCGG 8 cut(s) 75, 205, 362, 392, 477, 521, 653, 1194
BslI CCNNNNNNNGG 5 cut(s) 205, 438, 441, 442, 495
BsmAI GTCTC 2 cut(s) 19, 1162
BsnI GGCC 5 cut(s) 209, 395, 636, 670, 823
Bso31I GGTCTC 2 cut(s) 19, 1162
BsoBI CYCGRG 3 cut(s) 729, 1127, 1193
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 3 cut(s) 147, 490, 730
Bsp19I CCATGG 1 cut(s) 278
BspACI CCGC 8 cut(s) 80, 253, 341, 389, 442, 496, 686, 1009
BspANI GGCC 5 cut(s) 209, 395, 636, 670, 823
BspFNI CGCG 1 cut(s) 547
BspLI GGNNCC 6 cut(s) 197, 345, 430, 861, 1116, 1191
BspMAI CTGCAG 1 cut(s) 991
BspMI ACCTGC 1 cut(s) 105
BspPI GGATC 8 cut(s) 189, 196, 816, 964, 1109, 1122, 1184, 1197
BspT104I TTCGAA 1 cut(s) 464
BspT107I GGYRCC 2 cut(s) 343, 428
BspTI CTTAAG 1 cut(s) 1052
BspTNI GGTCTC 2 cut(s) 19, 1162
BsrBI CCGCTC 1 cut(s) 253
BsrDI GCAATG 2 cut(s) 709, 943
BsrFI RCCGGY 3 cut(s) 74, 361, 391
BsrI ACTGG 2 cut(s) 1030, 1163
BssAI RCCGGY 3 cut(s) 74, 361, 391
BssECI CCNNGG 8 cut(s) 147, 278, 405, 436, 519, 664, 1193, 1194
BssNI GRCGYC 1 cut(s) 429
BssT1I CCWWGG 5 cut(s) 147, 278, 405, 436, 664
Bst4CI ACNGT 2 cut(s) 763, 951
Bst6I CTCTTC 2 cut(s) 812, 894
BstACI GRCGYC 1 cut(s) 429
BstAFI CTTAAG 1 cut(s) 1052
BstAPI GCANNNNNTGC 2 cut(s) 77, 725
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 3 cut(s) 393, 531, 717
BstDSI CCRYGG 1 cut(s) 278
BstF5I GGATG 2 cut(s) 665, 1063
BstFNI CGCG 1 cut(s) 547
BstH2I RGCGCY 1 cut(s) 432
BstHHI GCGC 2 cut(s) 71, 431
BstMAI GTCTC 2 cut(s) 19, 1162
BstMWI GCNNNNNNNGC 7 cut(s) 35, 77, 158, 167, 502, 725, 857
BstSCI CCNGG 4 cut(s) 204, 519, 1192, 1193
BstSFI CTRYAG 1 cut(s) 987
BstSLI GKGCMC 1 cut(s) 147
BstUI CGCG 1 cut(s) 547
BstV1I GCAGC 7 cut(s) 13, 16, 83, 257, 350, 979, 1001
BstV2I GAAGAC 2 cut(s) 952, 1025
BstX2I RGATCY 5 cut(s) 181, 201, 808, 1114, 1189
BstYI RGATCY 5 cut(s) 181, 201, 808, 1114, 1189
BsuI GTATCC 2 cut(s) 546, 1072
BsuRI GGCC 5 cut(s) 209, 395, 636, 670, 823
BtgI CCRYGG 1 cut(s) 278
BtgZI GCGATG 1 cut(s) 47
BtsCI GGATG 2 cut(s) 665, 1063
BtsI GCAGTG 3 cut(s) 114, 726, 984
BtsIMutI CAGTG 4 cut(s) 114, 726, 756, 984
BveI ACCTGC 1 cut(s) 105
Cac8I GCNNGC 3 cut(s) 393, 531, 717
CfoI GCGC 2 cut(s) 71, 431
Cfr10I RCCGGY 3 cut(s) 74, 361, 391
Cfr13I GGNCC 4 cut(s) 207, 275, 668, 763
Cfr9I CCCGGG 1 cut(s) 1193
Csp6I GTAC 3 cut(s) 567, 627, 906
CviAII CATG 5 cut(s) 279, 298, 455, 506, 1099
CviQI GTAC 3 cut(s) 567, 627, 906
DinI GGCGCC 1 cut(s) 430
Eam1104I CTCTTC 2 cut(s) 812, 894
EarI CTCTTC 2 cut(s) 812, 894
Eco130I CCWWGG 5 cut(s) 147, 278, 405, 436, 664
Eco24I GRGCYC 1 cut(s) 490
Eco31I GGTCTC 2 cut(s) 19, 1162
Eco47I GGWCC 2 cut(s) 275, 763
Eco88I CYCGRG 3 cut(s) 729, 1127, 1193
EcoO109I RGGNCCY 1 cut(s) 668
EcoT14I CCWWGG 5 cut(s) 147, 278, 405, 436, 664
EcoT38I GRGCYC 1 cut(s) 490
EgeI GGCGCC 1 cut(s) 430
EheI GGCGCC 1 cut(s) 430
ErhI CCWWGG 5 cut(s) 147, 278, 405, 436, 664
FaeI CATG 5 cut(s) 282, 301, 458, 509, 1102
FatI CATG 5 cut(s) 278, 297, 454, 505, 1098
FauI CCCGC 1 cut(s) 435
FbaI TGATCA 4 cut(s) 447, 457, 571, 981
FokI GGATG 2 cut(s) 672, 1070
FriOI GRGCYC 1 cut(s) 490
FspBI CTAG 4 cut(s) 437, 698, 812, 1094
GlaI GCGC 2 cut(s) 70, 430
GsuI CTGGAG 2 cut(s) 182, 521
HaeII RGCGCY 1 cut(s) 432
HaeIII GGCC 5 cut(s) 209, 395, 636, 670, 823
HapII CCGG 8 cut(s) 75, 205, 362, 392, 477, 521, 653, 1194
HhaI GCGC 2 cut(s) 71, 431
Hin1I GRCGYC 1 cut(s) 429
Hin1II CATG 5 cut(s) 282, 301, 458, 509, 1102
Hin6I GCGC 2 cut(s) 69, 429
HinP1I GCGC 2 cut(s) 69, 429
HindIII AAGCTT 1 cut(s) 737
HinfI GANTC 4 cut(s) 349, 466, 549, 964
HpaII CCGG 8 cut(s) 75, 205, 362, 392, 477, 521, 653, 1194
HphI GGTGA 7 cut(s) 117, 457, 535, 745, 991, 1077, 1152
Hpy188I TCNGA 5 cut(s) 331, 471, 912, 1078, 1153
Hpy188III TCNNGA 6 cut(s) 199, 641, 674, 1094, 1127, 1169
Hpy99I CGWCG 2 cut(s) 166, 972
HpyAV CCTTC 5 cut(s) 130, 263, 322, 557, 647
HpyCH4III ACNGT 2 cut(s) 763, 951
HpyCH4V TGCA 5 cut(s) 107, 338, 482, 902, 989
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 77, 158, 167, 502, 725, 857
Hsp92I GRCGYC 1 cut(s) 429
Hsp92II CATG 5 cut(s) 282, 301, 458, 509, 1102
HspAI GCGC 2 cut(s) 69, 429
KasI GGCGCC 1 cut(s) 428
KroI GCCGGC 1 cut(s) 391
KroNI GCCGGC 1 cut(s) 393
Ksp22I TGATCA 4 cut(s) 447, 457, 571, 981
LmnI GCTCC 4 cut(s) 201, 502, 865, 880
Lsp1109I GCAGC 7 cut(s) 13, 16, 83, 257, 350, 979, 1001
LweI GCATC 2 cut(s) 650, 775
MaeI CTAG 4 cut(s) 437, 698, 812, 1094
MaeIII GTNAC 4 cut(s) 95, 123, 221, 835
MbiI CCGCTC 1 cut(s) 253
MboII GAAGA 5 cut(s) 829, 881, 957, 973, 1030
MflI RGATCY 5 cut(s) 181, 201, 808, 1114, 1189
MhlI GDGCHC 3 cut(s) 147, 490, 730
MluCI AATT 2 cut(s) 853, 1089
Mly113I GGCGCC 1 cut(s) 429
MmeI TCCRAC 3 cut(s) 786, 858, 922
MroNI GCCGGC 1 cut(s) 391
MseI TTAA 2 cut(s) 597, 1053
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 341, 992
MspCI CTTAAG 1 cut(s) 1052
MspI CCGG 8 cut(s) 75, 205, 362, 392, 477, 521, 653, 1194
MspR9I CCNGG 4 cut(s) 206, 521, 1194, 1195
MvnI CGCG 1 cut(s) 547
MwoI GCNNNNNNNGC 7 cut(s) 35, 77, 158, 167, 502, 725, 857
NaeI GCCGGC 1 cut(s) 393
NarI GGCGCC 1 cut(s) 429
NciI CCSGG 4 cut(s) 206, 521, 1194, 1195
NcoI CCATGG 1 cut(s) 278
NgoMIV GCCGGC 1 cut(s) 391
NlaIII CATG 5 cut(s) 282, 301, 458, 509, 1102
NlaIV GGNNCC 6 cut(s) 197, 345, 430, 861, 1116, 1191
NmuCI GTSAC 3 cut(s) 95, 123, 835
NspV TTCGAA 1 cut(s) 464
PaeR7I CTCGAG 1 cut(s) 1127
PcsI WCGNNNNNNNCGW 1 cut(s) 558
PdiI GCCGGC 1 cut(s) 393
PfeI GAWTC 4 cut(s) 349, 466, 549, 964
PluTI GGCGCC 1 cut(s) 432
PspN4I GGNNCC 6 cut(s) 197, 345, 430, 861, 1116, 1191
PspPI GGNCC 4 cut(s) 207, 275, 668, 763
PstI CTGCAG 1 cut(s) 991
PsuI RGATCY 5 cut(s) 181, 201, 808, 1114, 1189
PvuII CAGCTG 1 cut(s) 992
RsaI GTAC 3 cut(s) 568, 628, 907
RsaNI GTAC 3 cut(s) 567, 627, 906
RseI CAYNNNNRTG 1 cut(s) 102
SaqAI TTAA 2 cut(s) 597, 1053
Sau96I GGNCC 4 cut(s) 207, 275, 668, 763
ScaI AGTACT 1 cut(s) 907
ScrFI CCNGG 4 cut(s) 206, 521, 1194, 1195
SduI GDGCHC 3 cut(s) 147, 490, 730
SfaNI GCATC 2 cut(s) 650, 775
SfcI CTRYAG 1 cut(s) 987
SfoI GGCGCC 1 cut(s) 430
Sfr274I CTCGAG 1 cut(s) 1127
SfuI TTCGAA 1 cut(s) 464
SinI GGWCC 2 cut(s) 275, 763
SlaI CTCGAG 1 cut(s) 1127
SmaI CCCGGG 1 cut(s) 1195
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 2 cut(s) 1052, 1127
SmoI CTYRAG 2 cut(s) 1052, 1127
Sse9I AATT 2 cut(s) 853, 1089
SsiI CCGC 8 cut(s) 80, 253, 341, 389, 442, 496, 686, 1009
SspDI GGCGCC 1 cut(s) 428
SspMI CTAG 4 cut(s) 437, 698, 812, 1094
StyD4I CCNGG 4 cut(s) 204, 519, 1192, 1193
StyI CCWWGG 5 cut(s) 147, 278, 405, 436, 664
TaaI ACNGT 2 cut(s) 763, 951
TaqI TCGA 5 cut(s) 267, 464, 552, 959, 1128
TaqII GACCGA 2 cut(s) 371, 1021
TasI AATT 2 cut(s) 853, 1089
TatI WGTACW 1 cut(s) 905
TauI GCSGC 3 cut(s) 391, 499, 689
TfiI GAWTC 4 cut(s) 349, 466, 549, 964
Tru1I TTAA 2 cut(s) 597, 1053
Tru9I TTAA 2 cut(s) 597, 1053
TscAI CASTG 4 cut(s) 114, 726, 756, 991
TseFI GTSAC 3 cut(s) 95, 123, 835
TseI GCWGC 7 cut(s) 26, 29, 71, 245, 338, 989, 992
Tsp45I GTSAC 3 cut(s) 95, 123, 835
TspDTI ATGAA 3 cut(s) 255, 618, 731
TspGWI ACGGA 2 cut(s) 59, 336
TspMI CCCGGG 1 cut(s) 1193
TspRI CASTG 4 cut(s) 114, 726, 756, 991
Vha464I CTTAAG 1 cut(s) 1052
VpaK11BI GGWCC 2 cut(s) 275, 763
XbaI TCTAGA 1 cut(s) 1093
XcmI CCANNNNNNNNNTGG 1 cut(s) 154
XhoI CTCGAG 1 cut(s) 1127
XmaI CCCGGG 1 cut(s) 1193
XmaJI CCTAGG 1 cut(s) 436
XspI CTAG 4 cut(s) 437, 698, 812, 1094
ZrmI AGTACT 1 cut(s) 907
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.