Rmu_sc0002119.1_g000029

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002119.1
OG0000109
Physical Location & Seq
Forward (+)
161832 .. 163298
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002119.1_g000029.1.cds

Sequence Viewer

Length: 1329 bp
atgatggtggaggaggtctcagcccgtatggctgttgcgctcacaatcaaggagaatgggagggtgtcccttgggactgcgggctcctcggcgatctccagccagtcctatgccattgggaggcttttgtctcagaagaagaactttgactcacgtccttttatggctaccatgaccaatgtgtgggggttgaaacagagactctctatccggcatcaagaccatcgtttcattttgcgctttaacaagacggaggaacgagacaagatcttgttcggagggctgtggttctacggtcgttctatgtttgctttggtcgtgtatgacggcttctgtgaggccgaatcggtgcccatcctagcaattccggtctgggtggaagtgcttggccttcctccaatactgatgaccattgaagctgtctccatgatcggtgcttctttgggtcaggtccttcaggtggacagagcgaatattcgccgtggcttgaaggctagggttcgcatctcccatctgatcacaactccagtgaagcaagcctaccctccaatgctcttcgagtttgggacagggaaggatttggtttctgcaagggtgaccttccggtatgagaagatggttgggccgtcagatatgtctggaaccgacatcgtggctggggggaagcatcaggccaggcgtttggaggtggggggctctaaccctaggtcgaacccgccccctgtgtttcattttgtcgggttgggtttaacgaaggggccgacgtttcaggctgctgcaggtttgtctatgagcagtagcgtggccactcctactgtcgagccttcccattcttgtttgtctctctctacaccctgccgcgttacagaggagctagctaagccagtggcgctcccagttatcccttccccccgccggcaaccggtagagaaacctgtggtcgatgggactaaaaggaaagctgaggcttgggaattggtgacgtacagtaagaaagctcgagctgtggttcatgtccccataactgaacctgtgagcattggtcttgtccctgagttagctctacctcaccaggcgggtatcttgattgtctctcccccaaagaggcgtaaggtgggtaggcctttaggtgcaaagaataagcctagggttatggaggaagatcctgtggtgggggaggttcctgcggggaaggttgttgtggaggagattgctccaatggtaacagttgaatctgagaagactacggtggtggaggagatcgtcgtaggggaggctacttcttttagtttggtaactatggatcctggggatgccccctctgcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

442

Amino Acids

47.87

Weight (kDa)

9.53

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 770
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 183
AccII CGCG 1 cut(s) 861
AciI CCGC 6 cut(s) 80, 716, 859, 913, 1076, 1187
AclWI GGATC 3 cut(s) 1157, 1298, 1311
AcoI YGGCCR 1 cut(s) 804
AcuI CTGAAG 1 cut(s) 440
AfaI GTAC 1 cut(s) 986
AfiI CCNNNNNNNGG 7 cut(s) 120, 183, 460, 915, 922, 1104, 1172
AgeI ACCGGT 1 cut(s) 922
AgsI TTSAA 4 cut(s) 193, 416, 490, 1232
AjiI CACGTC 1 cut(s) 155
AjnI CCWGG 3 cut(s) 674, 1071, 1306
AluBI AGCT 7 cut(s) 419, 874, 878, 962, 998, 1004, 1061
AluI AGCT 7 cut(s) 419, 874, 878, 962, 998, 1004, 1061
Alw26I GTCTC 7 cut(s) 22, 135, 193, 255, 427, 846, 1096
AlwI GGATC 3 cut(s) 1157, 1298, 1311
Ama87I CYCGRG 1 cut(s) 999
AoxI GGCC 7 cut(s) 339, 388, 623, 672, 758, 804, 1121
ApeKI GCWGC 2 cut(s) 773, 776
AsiGI ACCGGT 1 cut(s) 922
AspA2I CCTAGG 2 cut(s) 704, 1145
AspLEI GCGC 3 cut(s) 40, 240, 892
AspS9I GGNCC 3 cut(s) 451, 623, 758
AsuHPI GGTGA 3 cut(s) 607, 991, 1061
AsuNHI GCTAGC 1 cut(s) 874
AvaI CYCGRG 1 cut(s) 999
AvaII GGWCC 1 cut(s) 451
AvrII CCTAGG 2 cut(s) 704, 1145
BaeGI GKGCMC 1 cut(s) 354
BalI TGGCCA 1 cut(s) 806
BamHI GGATCC 1 cut(s) 1303
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 2 cut(s) 86, 698
BarI GAAGNNNNNNTAC 4 cut(s) 314, 346, 524, 556
BbsI GAAGAC 1 cut(s) 1247
BbvCI CCTCAGC 1 cut(s) 963
BbvI GCAGC 2 cut(s) 760, 763
BccI CCATC 5 cut(s) 231, 362, 519, 610, 938
BceAI ACGGC 3 cut(s) 343, 465, 610
BciT130I CCWGG 3 cut(s) 676, 1073, 1308
BclI TGATCA 1 cut(s) 516
BcoDI GTCTC 7 cut(s) 22, 135, 193, 255, 427, 846, 1096
BfaI CTAG 5 cut(s) 359, 495, 705, 875, 1146
BfmI CTRYAG 1 cut(s) 777
BfoI RGCGCY 1 cut(s) 893
BfuAI ACCTGC 1 cut(s) 770
BglI GCCNNNNNGGC 1 cut(s) 29
BglII AGATCT 1 cut(s) 267
BisI GCNGC 3 cut(s) 774, 777, 859
BlnI CCTAGG 2 cut(s) 704, 1145
BlpI GCTNAGC 1 cut(s) 879
BlsI GCNGC 3 cut(s) 775, 778, 860
Bme1390I CCNGG 3 cut(s) 676, 1073, 1308
Bme18I GGWCC 1 cut(s) 451
BmeT110I CYCGRG 1 cut(s) 999
BmgBI CACGTC 1 cut(s) 155
BmgT120I GGNCC 3 cut(s) 451, 623, 758
BmiI GGNNCC 6 cut(s) 85, 351, 643, 759, 1182, 1305
BmrFI CCNGG 3 cut(s) 676, 1073, 1308
BmrI ACTGGG 1 cut(s) 890
BmsI GCATC 4 cut(s) 223, 513, 676, 1303
BmtI GCTAGC 1 cut(s) 878
BmuI ACTGGG 1 cut(s) 890
BoxI GACNNNNGTC 1 cut(s) 153
BpiI GAAGAC 1 cut(s) 1247
BplI GAGNNNNNCTC 1 cut(s) 34
BpmI CTGGAG 2 cut(s) 82, 510
Bpu10I CCTNAGC 1 cut(s) 963
Bpu1102I GCTNAGC 1 cut(s) 879
BsaI GGTCTC 1 cut(s) 22
BsaJI CCNNGG 6 cut(s) 70, 87, 481, 704, 1145, 1307
BsaWI WCCGGW 3 cut(s) 367, 603, 922
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 183, 460, 915, 922, 1104, 1172
Bse118I RCCGGY 2 cut(s) 915, 922
Bse1I ACTGG 4 cut(s) 103, 527, 884, 896
BseBI CCWGG 3 cut(s) 676, 1073, 1308
BseDI CCNNGG 6 cut(s) 70, 87, 481, 704, 1145, 1307
BseGI GGATG 2 cut(s) 354, 1318
BseLI CCNNNNNNNGG 7 cut(s) 120, 183, 460, 915, 922, 1104, 1172
BseMII CTCAG 5 cut(s) 33, 146, 954, 1044, 1227
BseNI ACTGG 4 cut(s) 103, 527, 884, 896
BseRI GAGGAG 5 cut(s) 26, 76, 884, 1220, 1271
BseSI GKGCMC 1 cut(s) 354
BseXI GCAGC 2 cut(s) 760, 763
BseYI CCCAGC 1 cut(s) 656
Bsh1236I CGCG 1 cut(s) 861
Bsh1285I CGRYCG 1 cut(s) 298
BshFI GGCC 7 cut(s) 341, 390, 625, 674, 760, 806, 1123
BshNI GGYRCC 1 cut(s) 349
BshTI ACCGGT 1 cut(s) 922
BsiEI CGRYCG 1 cut(s) 298
BsiHKCI CYCGRG 1 cut(s) 999
BsiSI CCGG 5 cut(s) 211, 368, 604, 916, 923
BslFI GGGAC 6 cut(s) 52, 88, 580, 961, 1001, 1034
BslI CCNNNNNNNGG 7 cut(s) 120, 183, 460, 915, 922, 1104, 1172
BsmAI GTCTC 7 cut(s) 22, 135, 193, 255, 427, 846, 1096
BsmFI GGGAC 6 cut(s) 52, 88, 580, 961, 1001, 1034
BsnI GGCC 7 cut(s) 341, 390, 625, 674, 760, 806, 1123
Bso31I GGTCTC 1 cut(s) 22
BsoBI CYCGRG 1 cut(s) 999
Bsp1286I GDGCHC 3 cut(s) 86, 354, 698
Bsp143I GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
Bsp1720I GCTNAGC 1 cut(s) 879
BspACI CCGC 6 cut(s) 80, 716, 859, 913, 1076, 1187
BspANI GGCC 7 cut(s) 341, 390, 625, 674, 760, 806, 1123
BspCNI CTCAG 5 cut(s) 32, 145, 955, 1045, 1228
BspFNI CGCG 1 cut(s) 861
BspLI GGNNCC 6 cut(s) 85, 351, 643, 759, 1182, 1305
BspMAI CTGCAG 1 cut(s) 781
BspMI ACCTGC 1 cut(s) 770
BspOI GCTAGC 1 cut(s) 878
BspPI GGATC 3 cut(s) 1157, 1298, 1311
BspQI GCTCTTC 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 22
BsrFI RCCGGY 2 cut(s) 915, 922
BsrI ACTGG 4 cut(s) 103, 527, 884, 896
BssAI RCCGGY 2 cut(s) 915, 922
BssECI CCNNGG 6 cut(s) 70, 87, 481, 704, 1145, 1307
BssMI GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
BssT1I CCWWGG 3 cut(s) 70, 704, 1145
Bst2UI CCWGG 3 cut(s) 676, 1073, 1308
Bst4CI ACNGT 5 cut(s) 296, 817, 989, 1228, 1249
Bst6I CTCTTC 1 cut(s) 560
BstC8I GCNNGC 4 cut(s) 82, 537, 876, 917
BstDEI CTNAG 6 cut(s) 19, 132, 879, 963, 1053, 1236
BstDSI CCRYGG 1 cut(s) 481
BstEII GGTNACC 1 cut(s) 595
BstF5I GGATG 2 cut(s) 354, 1318
BstFNI CGCG 1 cut(s) 861
BstH2I RGCGCY 1 cut(s) 893
BstHHI GCGC 3 cut(s) 40, 240, 892
BstKTI GATC 7 cut(s) 96, 270, 432, 519, 1165, 1263, 1306
BstMAI GTCTC 7 cut(s) 22, 135, 193, 255, 427, 846, 1096
BstMBI GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
BstMCI CGRYCG 1 cut(s) 298
BstMWI GCNNNNNNNGC 4 cut(s) 29, 880, 889, 1322
BstNI CCWGG 3 cut(s) 676, 1073, 1308
BstPAI GACNNNNGTC 1 cut(s) 153
BstPI GGTNACC 1 cut(s) 595
BstSCI CCNGG 3 cut(s) 674, 1071, 1306
BstSFI CTRYAG 1 cut(s) 777
BstSLI GKGCMC 1 cut(s) 354
BstUI CGCG 1 cut(s) 861
BstV1I GCAGC 2 cut(s) 760, 763
BstV2I GAAGAC 1 cut(s) 1247
BstX2I RGATCY 3 cut(s) 267, 1162, 1303
BstXI CCANNNNNNTGG 1 cut(s) 682
BstYI RGATCY 3 cut(s) 267, 1162, 1303
BsuRI GGCC 7 cut(s) 341, 390, 625, 674, 760, 806, 1123
BtgI CCRYGG 1 cut(s) 481
BtrI CACGTC 1 cut(s) 155
BtsCI GGATG 2 cut(s) 354, 1318
BtsIMutI CAGTG 2 cut(s) 534, 891
BveI ACCTGC 1 cut(s) 770
Cac8I GCNNGC 4 cut(s) 82, 537, 876, 917
CfoI GCGC 3 cut(s) 40, 240, 892
Cfr10I RCCGGY 2 cut(s) 915, 922
Cfr13I GGNCC 3 cut(s) 451, 623, 758
Csp6I GTAC 1 cut(s) 985
CspAI ACCGGT 1 cut(s) 922
CviAII CATG 3 cut(s) 172, 427, 1013
CviQI GTAC 1 cut(s) 985
DdeI CTNAG 6 cut(s) 19, 132, 879, 963, 1053, 1236
DpnI GATC 7 cut(s) 95, 269, 431, 518, 1164, 1262, 1305
DpnII GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
EaeI YGGCCR 1 cut(s) 804
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
Eco130I CCWWGG 3 cut(s) 70, 704, 1145
Eco147I AGGCCT 1 cut(s) 1123
Eco24I GRGCYC 2 cut(s) 86, 698
Eco31I GGTCTC 1 cut(s) 22
Eco47I GGWCC 1 cut(s) 451
Eco57I CTGAAG 1 cut(s) 440
Eco88I CYCGRG 1 cut(s) 999
Eco91I GGTNACC 1 cut(s) 595
EcoO109I RGGNCCY 1 cut(s) 451
EcoO65I GGTNACC 1 cut(s) 595
EcoRII CCWGG 3 cut(s) 674, 1071, 1306
EcoT14I CCWWGG 3 cut(s) 70, 704, 1145
EcoT38I GRGCYC 2 cut(s) 86, 698
ErhI CCWWGG 3 cut(s) 70, 704, 1145
FaeI CATG 3 cut(s) 175, 430, 1016
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 6 cut(s) 52, 88, 580, 961, 1001, 1034
FatI CATG 3 cut(s) 171, 426, 1012
FauI CCCGC 5 cut(s) 73, 723, 920, 1069, 1180
FbaI TGATCA 1 cut(s) 516
Fnu4HI GCNGC 3 cut(s) 774, 777, 859
FokI GGATG 2 cut(s) 341, 1325
FriOI GRGCYC 2 cut(s) 86, 698
Fsp4HI GCNGC 3 cut(s) 774, 777, 859
FspBI CTAG 5 cut(s) 359, 495, 705, 875, 1146
GlaI GCGC 3 cut(s) 39, 239, 891
GluI GCNGC 3 cut(s) 774, 777, 859
GsaI CCCAGC 1 cut(s) 660
GsuI CTGGAG 2 cut(s) 82, 510
HaeII RGCGCY 1 cut(s) 893
HaeIII GGCC 7 cut(s) 341, 390, 625, 674, 760, 806, 1123
HapII CCGG 5 cut(s) 211, 368, 604, 916, 923
HhaI GCGC 3 cut(s) 40, 240, 892
Hin1II CATG 3 cut(s) 175, 430, 1016
Hin6I GCGC 3 cut(s) 38, 238, 890
HinP1I GCGC 3 cut(s) 38, 238, 890
HinfI GANTC 4 cut(s) 149, 201, 344, 1232
HpaII CCGG 5 cut(s) 211, 368, 604, 916, 923
HphI GGTGA 3 cut(s) 607, 991, 1061
Hpy166II GTNNAC 1 cut(s) 463
Hpy188I TCNGA 5 cut(s) 135, 278, 516, 631, 1237
Hpy188III TCNNGA 3 cut(s) 218, 639, 1084
Hpy8I GTNNAC 1 cut(s) 463
Hpy99I CGWCG 2 cut(s) 766, 1268
HpyAV CCTTC 9 cut(s) 401, 464, 484, 568, 610, 748, 834, 915, 1186
HpyCH4III ACNGT 5 cut(s) 296, 817, 989, 1228, 1249
HpyCH4IV ACGT 3 cut(s) 154, 764, 983
HpyCH4V TGCA 3 cut(s) 590, 779, 1133
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 880, 889, 1322
HpyF3I CTNAG 6 cut(s) 19, 132, 879, 963, 1053, 1236
HpySE526I ACGT 3 cut(s) 154, 764, 983
Hsp92II CATG 3 cut(s) 175, 430, 1016
HspAI GCGC 3 cut(s) 38, 238, 890
KroI GCCGGC 1 cut(s) 915
KroNI GCCGGC 1 cut(s) 917
Ksp22I TGATCA 1 cut(s) 516
Kzo9I GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
LguI GCTCTTC 1 cut(s) 560
LmnI GCTCC 4 cut(s) 89, 871, 897, 1219
Lsp1109I GCAGC 2 cut(s) 760, 763
LweI GCATC 4 cut(s) 223, 513, 676, 1303
MaeI CTAG 5 cut(s) 359, 495, 705, 875, 1146
MaeII ACGT 3 cut(s) 154, 764, 983
MaeIII GTNAC 5 cut(s) 595, 862, 979, 1222, 1294
MalI GATC 7 cut(s) 95, 269, 431, 518, 1164, 1262, 1305
MboI GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
MboII GAAGA 6 cut(s) 148, 151, 547, 625, 1172, 1252
MflI RGATCY 3 cut(s) 267, 1162, 1303
MhlI GDGCHC 3 cut(s) 86, 354, 698
MlsI TGGCCA 1 cut(s) 806
MluCI AATT 2 cut(s) 363, 974
MluNI TGGCCA 1 cut(s) 806
MlyI GAGTC 2 cut(s) 143, 195
Mox20I TGGCCA 1 cut(s) 806
MroNI GCCGGC 1 cut(s) 915
MscI TGGCCA 1 cut(s) 806
MseI TTAA 2 cut(s) 243, 749
Msp20I TGGCCA 1 cut(s) 806
MspI CCGG 5 cut(s) 211, 368, 604, 916, 923
MspR9I CCNGG 3 cut(s) 676, 1073, 1308
MvaI CCWGG 3 cut(s) 676, 1073, 1308
MvnI CGCG 1 cut(s) 861
MwoI GCNNNNNNNGC 4 cut(s) 29, 880, 889, 1322
NaeI GCCGGC 1 cut(s) 917
NdeII GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
NgoMIV GCCGGC 1 cut(s) 915
NheI GCTAGC 1 cut(s) 874
NlaIII CATG 3 cut(s) 175, 430, 1016
NlaIV GGNNCC 6 cut(s) 85, 351, 643, 759, 1182, 1305
NmeAIII GCCGAG 1 cut(s) 68
NmuCI GTSAC 2 cut(s) 595, 979
PaeR7I CTCGAG 1 cut(s) 999
PceI AGGCCT 1 cut(s) 1123
PciSI GCTCTTC 1 cut(s) 560
PcsI WCGNNNNNNNCGW 1 cut(s) 758
PdiI GCCGGC 1 cut(s) 917
PfeI GAWTC 2 cut(s) 344, 1232
PflMI CCANNNNNTGG 1 cut(s) 183
PinAI ACCGGT 1 cut(s) 922
PkrI GCNGC 3 cut(s) 775, 778, 860
PleI GAGTC 2 cut(s) 143, 195
PpsI GAGTC 2 cut(s) 143, 195
PpuMI RGGWCCY 1 cut(s) 451
PshAI GACNNNNGTC 1 cut(s) 153
Psp5II RGGWCCY 1 cut(s) 451
Psp6I CCWGG 3 cut(s) 674, 1071, 1306
PspEI GGTNACC 1 cut(s) 595
PspFI CCCAGC 1 cut(s) 656
PspGI CCWGG 3 cut(s) 674, 1071, 1306
PspN4I GGNNCC 6 cut(s) 85, 351, 643, 759, 1182, 1305
PspPI GGNCC 3 cut(s) 451, 623, 758
PspPPI RGGWCCY 1 cut(s) 451
PspXI VCTCGAGB 1 cut(s) 999
PstI CTGCAG 1 cut(s) 781
PsuI RGATCY 3 cut(s) 267, 1162, 1303
RsaI GTAC 1 cut(s) 986
RsaNI GTAC 1 cut(s) 985
SapI GCTCTTC 1 cut(s) 560
SaqAI TTAA 2 cut(s) 243, 749
SatI GCNGC 3 cut(s) 774, 777, 859
Sau3AI GATC 7 cut(s) 93, 267, 429, 516, 1162, 1260, 1303
Sau96I GGNCC 3 cut(s) 451, 623, 758
SchI GAGTC 2 cut(s) 143, 195
ScrFI CCNGG 3 cut(s) 676, 1073, 1308
SduI GDGCHC 3 cut(s) 86, 354, 698
SfaNI GCATC 4 cut(s) 223, 513, 676, 1303
SfcI CTRYAG 1 cut(s) 777
Sfr274I CTCGAG 1 cut(s) 999
SinI GGWCC 1 cut(s) 451
SlaI CTCGAG 1 cut(s) 999
SmlI CTYRAG 1 cut(s) 999
SmoI CTYRAG 1 cut(s) 999
Sse9I AATT 2 cut(s) 363, 974
SseBI AGGCCT 1 cut(s) 1123
SsiI CCGC 6 cut(s) 80, 716, 859, 913, 1076, 1187
SspI AATATT 1 cut(s) 475
SspMI CTAG 5 cut(s) 359, 495, 705, 875, 1146
StuI AGGCCT 1 cut(s) 1123
StyD4I CCNGG 3 cut(s) 674, 1071, 1306
StyI CCWWGG 3 cut(s) 70, 704, 1145
TaaI ACNGT 5 cut(s) 296, 817, 989, 1228, 1249
TaiI ACGT 3 cut(s) 157, 767, 986
TaqI TCGA 5 cut(s) 558, 710, 819, 942, 1000
TasI AATT 2 cut(s) 363, 974
TauI GCSGC 1 cut(s) 861
TfiI GAWTC 2 cut(s) 344, 1232
Tru1I TTAA 2 cut(s) 243, 749
Tru9I TTAA 2 cut(s) 243, 749
TscAI CASTG 2 cut(s) 534, 891
TseFI GTSAC 2 cut(s) 595, 979
TseI GCWGC 2 cut(s) 773, 776
Tsp45I GTSAC 2 cut(s) 595, 979
TspDTI ATGAA 3 cut(s) 220, 719, 1001
TspGWI ACGGA 1 cut(s) 266
TspRI CASTG 2 cut(s) 534, 891
Van91I CCANNNNNTGG 1 cut(s) 183
VpaK11BI GGWCC 1 cut(s) 451
XhoI CTCGAG 1 cut(s) 999
XmaJI CCTAGG 2 cut(s) 704, 1145
XspI CTAG 5 cut(s) 359, 495, 705, 875, 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.