FvH4_5g12461

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000109
Physical Location & Seq
Forward (+)
7033051 .. 7034320
1270 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g12461.t1

Sequence Viewer

Length: 1026 bp
ATGGCCGATGAGGTATCCAGATTGACGGCAGCGCTGGCGATCTCGGAGAAAGGCAAGGTGTCCTTTGGAGCCGCTGGGGCAGCGGCGTATTCGGGCCATGCCTATGTGGTGGGACGTCTTCTCTCATCTAAGAAGAAAGTGGTTCCAAAATCGTTCACGGCAACGATGGCAGCTATATGGGGGAAGAAAAATCGGCTACAGATCGGACAAGAAGGAGATCGGTATGTTCTTCGATTCACTGAGAAGGAAGAATGCGATCAGATCATGAGCGGAGGACCCTGGTTCTATGGGAAATCCATGTTTGCCCTAGCAAACTACAATGGGAGGATGGCGGCAGATGCAGTTCCGATCACCACCATACTTGTTTGGGTGGAGATATTCGGTCTCCCTCCGGATTTGAAGACCAAGGAGGCACTCTTCATGGTTGGTGCAACCCGAGGGACCATCATCCAAACGGATCTACCAAATCTGAAATGCGATGCTAGGGCAAGGATCCGGATTGAGCATCGTCTTGATTCTCCAGTCAAGCAAGCATATCCTCTGATGGTGTTCGAATTTGGGGTAGCATCCGACGAGTGGTTGTCGTGGACCGCCAGATATGTCGACGGCTTTGAGGATGGGTGCACCACAAAATTGGCTCCGATGCAGCCTTTAGTGTTTAGACAGGTGGTGGAGTCTCCGCCGGTCCCAATCTCACGGGAGATTGCTCTCTCTACCAAGACAATCTCAGGGACCAAGAGGAATGCGTCCTCATTGATGGAGGTTGATCTGGGCAAACGCCCTAGGGGTCCTCCGACTGTGCTTAAAGCTGTCAACGTCAATTTGGGGCCTGTGTTGGAGCTATCACTCCCTAATTTTGCAGGTACTCTCATTAAGCTCAAGATTAATGCGAATGCAAAAAAGTTGAAGACTAAAAAGCGTATTCAAGGTGTGAAATGTATGCTGGAGTTGGAAGGGACACCAGTTGTGCAGACTGATCAGGAGAAGGTGGCAATGGAGGATCCCGGGGAAACCTCCTCTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

342

Amino Acids

37.26

Weight (kDa)

9.4

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 36 - 107 3.2e-09 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 118
Acc36I ACCTGC 1 cut(s) 851
AccBSI CCGCTC 1 cut(s) 270
AccI GTMKAC 1 cut(s) 603
AccIII TCCGGA 2 cut(s) 391, 495
AciI CCGC 6 cut(s) 72, 83, 270, 332, 591, 680
AclWI GGATC 5 cut(s) 465, 487, 500, 995, 1008
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 554
AcyI GRCGYC 1 cut(s) 115
AfaI GTAC 1 cut(s) 865
AfeI AGCGCT 1 cut(s) 33
AfiI CCNNNNNNNGG 1 cut(s) 576
AgsI TTSAA 3 cut(s) 400, 907, 926
AjnI CCWGG 1 cut(s) 278
AluBI AGCT 4 cut(s) 173, 809, 841, 877
AluI AGCT 4 cut(s) 173, 809, 841, 877
Alw21I GWGCWC 1 cut(s) 626
Alw26I GTCTC 2 cut(s) 389, 681
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 5 cut(s) 465, 487, 500, 995, 1008
Ama87I CYCGRG 2 cut(s) 435, 1004
Aor13HI TCCGGA 2 cut(s) 391, 495
Aor51HI AGCGCT 1 cut(s) 33
AoxI GGCC 3 cut(s) 3, 94, 827
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 4 cut(s) 29, 80, 170, 646
ApoI RAATTY 1 cut(s) 554
AseI ATTAAT 1 cut(s) 885
AspA2I CCTAGG 1 cut(s) 782
AspLEI GCGC 1 cut(s) 34
AspS9I GGNCC 8 cut(s) 94, 275, 441, 588, 685, 732, 788, 827
AsuC2I CCSGG 2 cut(s) 1005, 1006
AsuHPI GGTGA 1 cut(s) 343
AsuII TTCGAA 1 cut(s) 552
AvaI CYCGRG 2 cut(s) 435, 1004
AvaII GGWCC 6 cut(s) 275, 441, 588, 685, 732, 788
AvrII CCTAGG 1 cut(s) 782
BaeGI GKGCMC 1 cut(s) 626
BamHI GGATCC 2 cut(s) 492, 1000
BbsI GAAGAC 3 cut(s) 110, 407, 914
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 4 cut(s) 41, 92, 182, 658
BccI CCATC 6 cut(s) 160, 322, 452, 538, 611, 751
BceAI ACGGC 3 cut(s) 42, 174, 622
BciT130I CCWGG 1 cut(s) 280
BciVI GTATCC 1 cut(s) 25
BclI TGATCA 1 cut(s) 976
BcnI CCSGG 2 cut(s) 1005, 1006
BcoDI GTCTC 2 cut(s) 389, 681
BfaI CTAG 3 cut(s) 308, 483, 783
BfmI CTRYAG 1 cut(s) 197
BfoI RGCGCY 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 851
BfuI GTATCC 1 cut(s) 25
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 7 cut(s) 30, 72, 81, 84, 171, 333, 647
BlnI CCTAGG 1 cut(s) 782
BlsI GCNGC 7 cut(s) 31, 73, 82, 85, 172, 334, 648
Bme1390I CCNGG 3 cut(s) 280, 1005, 1006
Bme18I GGWCC 6 cut(s) 275, 441, 588, 685, 732, 788
BmeT110I CYCGRG 2 cut(s) 435, 1004
BmgT120I GGNCC 8 cut(s) 94, 275, 441, 588, 685, 732, 788, 827
BmrFI CCNGG 3 cut(s) 280, 1005, 1006
BmsI GCATC 5 cut(s) 328, 469, 514, 575, 633
BpiI GAAGAC 3 cut(s) 110, 407, 914
BpmI CTGGAG 2 cut(s) 504, 965
Bpu14I TTCGAA 1 cut(s) 552
BpuEI CTTGAG 1 cut(s) 863
BpuMI CCSGG 2 cut(s) 1005, 1006
BsaHI GRCGYC 1 cut(s) 115
BsaI GGTCTC 1 cut(s) 389
BsaJI CCNNGG 6 cut(s) 278, 405, 436, 782, 1004, 1005
BsaWI WCCGGW 2 cut(s) 391, 495
Bsc4I CCNNNNNNNGG 1 cut(s) 576
Bse118I RCCGGY 1 cut(s) 682
Bse1I ACTGG 2 cut(s) 521, 962
Bse3DI GCAATG 1 cut(s) 999
BseAI TCCGGA 2 cut(s) 391, 495
BseBI CCWGG 1 cut(s) 280
BseDI CCNNGG 6 cut(s) 278, 405, 436, 782, 1004, 1005
BseGI GGATG 4 cut(s) 333, 447, 566, 622
BseLI CCNNNNNNNGG 1 cut(s) 576
BseMI GCAATG 1 cut(s) 999
BseMII CTCAG 2 cut(s) 231, 741
BseNI ACTGG 2 cut(s) 521, 962
BseRI GAGGAG 1 cut(s) 1006
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 4 cut(s) 41, 92, 182, 658
BseYI CCCAGC 1 cut(s) 74
BsgI GTGCAG 1 cut(s) 989
BshFI GGCC 3 cut(s) 5, 96, 829
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 2 cut(s) 435, 1004
BsiSI CCGG 4 cut(s) 392, 496, 683, 1005
BslFI GGGAC 5 cut(s) 126, 454, 671, 745, 970
BslI CCNNNNNNNGG 1 cut(s) 576
BsmAI GTCTC 2 cut(s) 389, 681
BsmFI GGGAC 5 cut(s) 126, 454, 671, 745, 970
BsmI GAATGC 3 cut(s) 257, 748, 898
BsnI GGCC 3 cut(s) 5, 96, 829
Bso31I GGTCTC 1 cut(s) 389
BsoBI CYCGRG 2 cut(s) 435, 1004
Bsp119I TTCGAA 1 cut(s) 552
Bsp1286I GDGCHC 1 cut(s) 626
Bsp13I TCCGGA 2 cut(s) 391, 495
BspACI CCGC 6 cut(s) 72, 83, 270, 332, 591, 680
BspANI GGCC 3 cut(s) 5, 96, 829
BspCNI CTCAG 2 cut(s) 232, 740
BspEI TCCGGA 2 cut(s) 391, 495
BspHI TCATGA 1 cut(s) 264
BspMI ACCTGC 1 cut(s) 851
BspPI GGATC 5 cut(s) 465, 487, 500, 995, 1008
BspT104I TTCGAA 1 cut(s) 552
BspTNI GGTCTC 1 cut(s) 389
BsrBI CCGCTC 1 cut(s) 270
BsrDI GCAATG 1 cut(s) 999
BsrFI RCCGGY 1 cut(s) 682
BsrI ACTGG 2 cut(s) 521, 962
BssAI RCCGGY 1 cut(s) 682
BssECI CCNNGG 6 cut(s) 278, 405, 436, 782, 1004, 1005
BssNI GRCGYC 1 cut(s) 115
BssT1I CCWWGG 2 cut(s) 405, 782
Bst2UI CCWGG 1 cut(s) 280
Bst4CI ACNGT 1 cut(s) 799
Bst6I CTCTTC 1 cut(s) 422
BstACI GRCGYC 1 cut(s) 115
BstBI TTCGAA 1 cut(s) 552
BstC8I GCNNGC 2 cut(s) 36, 531
BstDEI CTNAG 3 cut(s) 129, 240, 727
BstF5I GGATG 4 cut(s) 333, 447, 566, 622
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 1 cut(s) 34
BstMAI GTCTC 2 cut(s) 389, 681
BstMWI GCNNNNNNNGC 5 cut(s) 35, 77, 80, 167, 338
BstNI CCWGG 1 cut(s) 280
BstSCI CCNGG 3 cut(s) 278, 1003, 1004
BstSFI CTRYAG 1 cut(s) 197
BstSLI GKGCMC 1 cut(s) 626
BstV1I GCAGC 4 cut(s) 41, 92, 182, 658
BstV2I GAAGAC 3 cut(s) 110, 407, 914
BstX2I RGATCY 3 cut(s) 457, 492, 1000
BstXI CCANNNNNNTGG 1 cut(s) 634
BstYI RGATCY 3 cut(s) 457, 492, 1000
BsuI GTATCC 1 cut(s) 25
BsuRI GGCC 3 cut(s) 5, 96, 829
BtgZI GCGATG 1 cut(s) 492
BtsCI GGATG 4 cut(s) 333, 447, 566, 622
BtsIMutI CAGTG 1 cut(s) 237
BveI ACCTGC 1 cut(s) 851
Cac8I GCNNGC 2 cut(s) 36, 531
CciI TCATGA 1 cut(s) 264
CfoI GCGC 1 cut(s) 34
Cfr10I RCCGGY 1 cut(s) 682
Cfr13I GGNCC 8 cut(s) 94, 275, 441, 588, 685, 732, 788, 827
Cfr9I CCCGGG 1 cut(s) 1004
CseI GACGC 1 cut(s) 735
Csp6I GTAC 1 cut(s) 864
CspCI CAANNNNNGTGG 2 cut(s) 343, 378
CviAII CATG 4 cut(s) 98, 265, 298, 421
CviQI GTAC 1 cut(s) 864
DdeI CTNAG 3 cut(s) 129, 240, 727
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 422
EarI CTCTTC 1 cut(s) 422
EciI GGCGGA 1 cut(s) 669
Eco130I CCWWGG 2 cut(s) 405, 782
Eco31I GGTCTC 1 cut(s) 389
Eco47I GGWCC 6 cut(s) 275, 441, 588, 685, 732, 788
Eco47III AGCGCT 1 cut(s) 33
Eco88I CYCGRG 2 cut(s) 435, 1004
EcoO109I RGGNCCY 3 cut(s) 275, 788, 827
EcoRII CCWGG 1 cut(s) 278
EcoT14I CCWWGG 2 cut(s) 405, 782
ErhI CCWWGG 2 cut(s) 405, 782
FaeI CATG 4 cut(s) 101, 268, 301, 424
FalI AAGNNNNNCTT 2 cut(s) 47, 79
FaqI GGGAC 5 cut(s) 126, 454, 671, 745, 970
FatI CATG 4 cut(s) 97, 264, 297, 420
FbaI TGATCA 1 cut(s) 976
FblI GTMKAC 1 cut(s) 603
Fnu4HI GCNGC 7 cut(s) 30, 72, 81, 84, 171, 333, 647
FokI GGATG 4 cut(s) 340, 434, 553, 629
Fsp4HI GCNGC 7 cut(s) 30, 72, 81, 84, 171, 333, 647
FspBI CTAG 3 cut(s) 308, 483, 783
GlaI GCGC 1 cut(s) 33
GluI GCNGC 7 cut(s) 30, 72, 81, 84, 171, 333, 647
GsaI CCCAGC 1 cut(s) 78
GsuI CTGGAG 2 cut(s) 504, 965
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 3 cut(s) 5, 96, 829
HapII CCGG 4 cut(s) 392, 496, 683, 1005
HgaI GACGC 1 cut(s) 735
HhaI GCGC 1 cut(s) 34
Hin1I GRCGYC 1 cut(s) 115
Hin1II CATG 4 cut(s) 101, 268, 301, 424
Hin6I GCGC 1 cut(s) 32
HinP1I GCGC 1 cut(s) 32
HincII GTYRAC 2 cut(s) 604, 814
HindII GTYRAC 2 cut(s) 604, 814
HinfI GANTC 3 cut(s) 234, 515, 674
HpaII CCGG 4 cut(s) 392, 496, 683, 1005
HphI GGTGA 1 cut(s) 343
Hpy166II GTNNAC 5 cut(s) 156, 588, 604, 624, 814
Hpy188I TCNGA 9 cut(s) 46, 206, 261, 348, 471, 543, 571, 642, 795
Hpy188III TCNNGA 7 cut(s) 18, 265, 392, 496, 512, 880, 980
Hpy8I GTNNAC 5 cut(s) 156, 588, 604, 624, 814
Hpy99I CGWCG 2 cut(s) 575, 608
HpyAV CCTTC 4 cut(s) 206, 238, 947, 979
HpyCH4III ACNGT 1 cut(s) 799
HpyCH4IV ACGT 2 cut(s) 115, 816
HpyCH4V TGCA 7 cut(s) 341, 431, 624, 646, 860, 896, 970
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 77, 80, 167, 338
HpyF3I CTNAG 3 cut(s) 129, 240, 727
HpySE526I ACGT 2 cut(s) 115, 816
Hsp92I GRCGYC 1 cut(s) 115
Hsp92II CATG 4 cut(s) 101, 268, 301, 424
HspAI GCGC 1 cut(s) 32
Kpn2I TCCGGA 2 cut(s) 391, 495
Ksp22I TGATCA 1 cut(s) 976
LmnI GCTCC 3 cut(s) 68, 643, 838
Lsp1109I GCAGC 4 cut(s) 41, 92, 182, 658
LweI GCATC 5 cut(s) 328, 469, 514, 575, 633
MaeI CTAG 3 cut(s) 308, 483, 783
MaeII ACGT 2 cut(s) 115, 816
MbiI CCGCTC 1 cut(s) 270
MboII GAAGA 8 cut(s) 110, 145, 196, 221, 260, 409, 412, 919
MflI RGATCY 3 cut(s) 457, 492, 1000
MhlI GDGCHC 1 cut(s) 626
MluCI AATT 4 cut(s) 554, 632, 820, 853
MlyI GAGTC 1 cut(s) 683
MmeI TCCRAC 4 cut(s) 594, 816, 818, 930
MroI TCCGGA 2 cut(s) 391, 495
MseI TTAA 3 cut(s) 804, 873, 885
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 74, 83
MspI CCGG 4 cut(s) 392, 496, 683, 1005
MspR9I CCNGG 3 cut(s) 280, 1005, 1006
Mva1269I GAATGC 3 cut(s) 257, 748, 898
MvaI CCWGG 1 cut(s) 280
MwoI GCNNNNNNNGC 5 cut(s) 35, 77, 80, 167, 338
NciI CCSGG 2 cut(s) 1005, 1006
NlaIII CATG 4 cut(s) 101, 268, 301, 424
NspV TTCGAA 1 cut(s) 552
PagI TCATGA 1 cut(s) 264
PctI GAATGC 3 cut(s) 257, 748, 898
PfeI GAWTC 2 cut(s) 234, 515
PkrI GCNGC 7 cut(s) 31, 73, 82, 85, 172, 334, 648
PleI GAGTC 1 cut(s) 682
PpsI GAGTC 1 cut(s) 682
PpuMI RGGWCCY 2 cut(s) 275, 788
PshBI ATTAAT 1 cut(s) 885
Psp5II RGGWCCY 2 cut(s) 275, 788
Psp6I CCWGG 1 cut(s) 278
PspFI CCCAGC 1 cut(s) 74
PspGI CCWGG 1 cut(s) 278
PspPI GGNCC 8 cut(s) 94, 275, 441, 588, 685, 732, 788, 827
PspPPI RGGWCCY 2 cut(s) 275, 788
PsuI RGATCY 3 cut(s) 457, 492, 1000
RsaI GTAC 1 cut(s) 865
RsaNI GTAC 1 cut(s) 864
RseI CAYNNNNRTG 1 cut(s) 102
SalI GTCGAC 1 cut(s) 602
SaqAI TTAA 3 cut(s) 804, 873, 885
SatI GCNGC 7 cut(s) 30, 72, 81, 84, 171, 333, 647
Sau96I GGNCC 8 cut(s) 94, 275, 441, 588, 685, 732, 788, 827
SchI GAGTC 1 cut(s) 683
ScrFI CCNGG 3 cut(s) 280, 1005, 1006
SduI GDGCHC 1 cut(s) 626
SfaNI GCATC 5 cut(s) 328, 469, 514, 575, 633
SfcI CTRYAG 1 cut(s) 197
SfuI TTCGAA 1 cut(s) 552
SinI GGWCC 6 cut(s) 275, 441, 588, 685, 732, 788
SmaI CCCGGG 1 cut(s) 1006
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 1 cut(s) 878
SmoI CTYRAG 1 cut(s) 878
Sse9I AATT 4 cut(s) 554, 632, 820, 853
SsiI CCGC 6 cut(s) 72, 83, 270, 332, 591, 680
SspMI CTAG 3 cut(s) 308, 483, 783
StyD4I CCNGG 3 cut(s) 278, 1003, 1004
StyI CCWWGG 2 cut(s) 405, 782
TaaI ACNGT 1 cut(s) 799
TaiI ACGT 2 cut(s) 118, 819
TaqI TCGA 3 cut(s) 232, 552, 603
TaqII GACCGA 1 cut(s) 371
TasI AATT 4 cut(s) 554, 632, 820, 853
TauI GCSGC 3 cut(s) 74, 86, 335
TfiI GAWTC 2 cut(s) 234, 515
Tru1I TTAA 3 cut(s) 804, 873, 885
Tru9I TTAA 3 cut(s) 804, 873, 885
TscAI CASTG 1 cut(s) 244
TseI GCWGC 4 cut(s) 29, 80, 170, 646
TspDTI ATGAA 1 cut(s) 409
TspGWI ACGGA 1 cut(s) 470
TspMI CCCGGG 1 cut(s) 1004
TspRI CASTG 1 cut(s) 244
VneI GTGCAC 1 cut(s) 622
VpaK11BI GGWCC 6 cut(s) 275, 441, 588, 685, 732, 788
VspI ATTAAT 1 cut(s) 885
XapI RAATTY 1 cut(s) 554
XmaI CCCGGG 1 cut(s) 1004
XmaJI CCTAGG 1 cut(s) 782
XmiI GTMKAC 1 cut(s) 603
XspI CTAG 3 cut(s) 308, 483, 783
ZraI GACGTC 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.