Rorug02G0375900

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000109
Physical Location & Seq
Forward (+)
47917928 .. 47919516
1589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0375900.1

Sequence Viewer

Length: 615 bp
ATGAAGGAAGGGCTCGTGGAACCTGCCTTCGTATTCGAGGAAGAAACCTACCTCACCGTTTCCAAAACCTCCCTCTTCTTCGCCGGCGACGGCTTCTCCGTCTACGATCGCAACGCTCAACTCGTCTTCCGAGTCGACTCGTACGGCCCCGACCCCCACGACAGGACCGAGCTCGTCCTCATGGACGCCACCGGCCGCTGCCTTCTCACCGTCCGTCGAAAGAGGCCGAGTCTGCATCACCGGTGGGAAGGGTATGTCGGGGAGAGGATGGAGGGCCAGAAGCCAATCTTCAGCGTCCGCCGCTCGTCCATAATCGGACGGTCGAGCGTGACCGTGGAAGTCTTCCGGGAGTCACCGGAGGAGTACCAGATCGAAGGGTCGTTCGCGCAGCGCTGCTGCACGATCTTCAACGCTGAGAAGGAACCGGTTGCTGAGATCCGACGCAAAGTGGATGCTTCCACCCAAGTGGTGCTTGGGAAGGACGTCTTCTCTCTCGCACTCAGGCCTGGATTCGATGCAGCTTTTTCCATGGGACTGGTGCTCGTGCTTGACCAGATCAACGGCGATGGGTTTGTGGAGGAGGAGGTGGAGATGGACCTGACCGCAGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

204

Amino Acids

23.06

Weight (kDa)

4.88

Isoelectric Point (pI)

51.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LOR PF04525 18 - 184 2.3e-39 LURP-one-related
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 486
Acc36I ACCTGC 1 cut(s) 31
AccBSI CCGCTC 1 cut(s) 303
AccI GTMKAC 2 cut(s) 102, 135
AccII CGCG 1 cut(s) 386
AciI CCGC 4 cut(s) 196, 298, 301, 603
AclWI GGATC 1 cut(s) 430
AcoI YGGCCR 1 cut(s) 193
AcuI CTGAAG 1 cut(s) 274
AcyI GRCGYC 2 cut(s) 186, 483
AfaI GTAC 2 cut(s) 143, 365
AfeI AGCGCT 1 cut(s) 392
AfiI CCNNNNNNNGG 1 cut(s) 162
AgeI ACCGGT 2 cut(s) 240, 424
AgsI TTSAA 1 cut(s) 409
AjnI CCWGG 1 cut(s) 505
AleI CACNNNNGTG 1 cut(s) 464
AluBI AGCT 2 cut(s) 172, 521
AluI AGCT 2 cut(s) 172, 521
Alw21I GWGCWC 2 cut(s) 174, 543
AlwI GGATC 1 cut(s) 430
Aor51HI AGCGCT 1 cut(s) 392
AoxI GGCC 5 cut(s) 145, 193, 224, 274, 503
ApeKI GCWGC 5 cut(s) 198, 388, 393, 396, 518
AsiGI ACCGGT 2 cut(s) 240, 424
AspLEI GCGC 2 cut(s) 388, 393
AspS9I GGNCC 4 cut(s) 146, 165, 274, 595
AsuC2I CCSGG 1 cut(s) 347
AsuHPI GGTGA 4 cut(s) 46, 199, 230, 345
AvaII GGWCC 2 cut(s) 165, 595
BanII GRGCYC 2 cut(s) 15, 174
BauI CACGAG 2 cut(s) 14, 542
BbsI GAAGAC 3 cut(s) 118, 334, 478
Bbv12I GWGCWC 2 cut(s) 174, 543
BbvI GCAGC 5 cut(s) 185, 380, 383, 400, 530
BccI CCATC 3 cut(s) 262, 560, 586
BceAI ACGGC 3 cut(s) 106, 160, 577
BciT130I CCWGG 1 cut(s) 507
BcnI CCSGG 1 cut(s) 347
BfoI RGCGCY 1 cut(s) 394
BfuAI ACCTGC 1 cut(s) 31
BisI GCNGC 7 cut(s) 196, 199, 301, 389, 394, 397, 519
BlsI GCNGC 7 cut(s) 197, 200, 302, 390, 395, 398, 520
Bme1390I CCNGG 2 cut(s) 347, 507
Bme18I GGWCC 2 cut(s) 165, 595
BmgT120I GGNCC 4 cut(s) 146, 165, 274, 595
BmiI GGNNCC 3 cut(s) 21, 148, 423
BmrFI CCNGG 2 cut(s) 347, 507
BmsI GCATC 3 cut(s) 244, 442, 505
BpiI GAAGAC 3 cut(s) 118, 334, 478
BpuMI CCSGG 1 cut(s) 347
BsaHI GRCGYC 2 cut(s) 186, 483
BsaJI CCNNGG 2 cut(s) 333, 528
BsaWI WCCGGW 3 cut(s) 240, 355, 424
BsaXI ACNNNNNCTCC 2 cut(s) 80, 110
Bsc4I CCNNNNNNNGG 1 cut(s) 162
Bse118I RCCGGY 4 cut(s) 83, 191, 240, 424
Bse1I ACTGG 1 cut(s) 540
BseBI CCWGG 1 cut(s) 507
BseDI CCNNGG 2 cut(s) 333, 528
BseGI GGATG 2 cut(s) 273, 457
BseLI CCNNNNNNNGG 1 cut(s) 162
BseMII CTCAG 3 cut(s) 405, 423, 514
BseNI ACTGG 1 cut(s) 540
BseRI GAGGAG 3 cut(s) 374, 593, 596
BseX3I CGGCCG 1 cut(s) 193
BseXI GCAGC 5 cut(s) 185, 380, 383, 400, 530
BsgI GTGCAG 1 cut(s) 382
Bsh1236I CGCG 1 cut(s) 386
Bsh1285I CGRYCG 3 cut(s) 109, 196, 323
BshFI GGCC 5 cut(s) 147, 195, 226, 276, 505
BshTI ACCGGT 2 cut(s) 240, 424
BsiEI CGRYCG 3 cut(s) 109, 196, 323
BsiHKAI GWGCWC 2 cut(s) 174, 543
BsiSI CCGG 6 cut(s) 84, 192, 241, 346, 356, 425
BsiWI CGTACG 1 cut(s) 141
BslFI GGGAC 1 cut(s) 546
BslI CCNNNNNNNGG 1 cut(s) 162
BsmFI GGGAC 1 cut(s) 546
BsnI GGCC 5 cut(s) 147, 195, 226, 276, 505
Bsp1286I GDGCHC 3 cut(s) 15, 174, 543
Bsp143I GATC 5 cut(s) 106, 369, 402, 435, 555
Bsp19I CCATGG 1 cut(s) 528
BspACI CCGC 4 cut(s) 196, 298, 301, 603
BspANI GGCC 5 cut(s) 147, 195, 226, 276, 505
BspCNI CTCAG 3 cut(s) 406, 424, 513
BspFNI CGCG 1 cut(s) 386
BspLI GGNNCC 3 cut(s) 21, 148, 423
BspMI ACCTGC 1 cut(s) 31
BspPI GGATC 1 cut(s) 430
BsrBI CCGCTC 1 cut(s) 303
BsrFI RCCGGY 4 cut(s) 83, 191, 240, 424
BsrI ACTGG 1 cut(s) 540
BssAI RCCGGY 4 cut(s) 83, 191, 240, 424
BssECI CCNNGG 2 cut(s) 333, 528
BssMI GATC 5 cut(s) 106, 369, 402, 435, 555
BssNI GRCGYC 2 cut(s) 186, 483
BssSI CACGAG 2 cut(s) 14, 542
BssT1I CCWWGG 1 cut(s) 528
Bst2BI CACGAG 2 cut(s) 14, 542
Bst2UI CCWGG 1 cut(s) 507
Bst4CI ACNGT 4 cut(s) 58, 211, 321, 334
Bst6I CTCTTC 1 cut(s) 80
BstACI GRCGYC 2 cut(s) 186, 483
BstC8I GCNNGC 1 cut(s) 85
BstDEI CTNAG 3 cut(s) 414, 432, 500
BstDSI CCRYGG 2 cut(s) 333, 528
BstF5I GGATG 2 cut(s) 273, 457
BstFNI CGCG 1 cut(s) 386
BstH2I RGCGCY 1 cut(s) 394
BstHHI GCGC 2 cut(s) 388, 393
BstKTI GATC 5 cut(s) 109, 372, 405, 438, 558
BstMBI GATC 5 cut(s) 106, 369, 402, 435, 555
BstMCI CGRYCG 3 cut(s) 109, 196, 323
BstMWI GCNNNNNNNGC 2 cut(s) 232, 300
BstNI CCWGG 1 cut(s) 507
BstSCI CCNGG 2 cut(s) 345, 505
BstUI CGCG 1 cut(s) 386
BstV1I GCAGC 5 cut(s) 185, 380, 383, 400, 530
BstV2I GAAGAC 3 cut(s) 118, 334, 478
BstX2I RGATCY 1 cut(s) 435
BstXI CCANNNNNNTGG 2 cut(s) 466, 535
BstYI RGATCY 1 cut(s) 435
BstZI CGGCCG 1 cut(s) 193
BsuRI GGCC 5 cut(s) 147, 195, 226, 276, 505
BtgI CCRYGG 2 cut(s) 333, 528
BtgZI GCGATG 1 cut(s) 579
BtsCI GGATG 2 cut(s) 273, 457
BveI ACCTGC 1 cut(s) 31
Cac8I GCNNGC 1 cut(s) 85
CfoI GCGC 2 cut(s) 388, 393
Cfr10I RCCGGY 4 cut(s) 83, 191, 240, 424
Cfr13I GGNCC 4 cut(s) 146, 165, 274, 595
CseI GACGC 3 cut(s) 194, 283, 450
Csp6I GTAC 2 cut(s) 142, 364
CspAI ACCGGT 2 cut(s) 240, 424
CviAII CATG 2 cut(s) 181, 529
CviQI GTAC 2 cut(s) 142, 364
DdeI CTNAG 3 cut(s) 414, 432, 500
DpnI GATC 5 cut(s) 108, 371, 404, 437, 557
DpnII GATC 5 cut(s) 106, 369, 402, 435, 555
EaeI YGGCCR 1 cut(s) 193
EagI CGGCCG 1 cut(s) 193
Eam1104I CTCTTC 1 cut(s) 80
EarI CTCTTC 1 cut(s) 80
EciI GGCGGA 1 cut(s) 287
Ecl136II GAGCTC 1 cut(s) 172
EclXI CGGCCG 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 528
Eco147I AGGCCT 1 cut(s) 505
Eco24I GRGCYC 2 cut(s) 15, 174
Eco47I GGWCC 2 cut(s) 165, 595
Eco47III AGCGCT 1 cut(s) 392
Eco52I CGGCCG 1 cut(s) 193
Eco53kI GAGCTC 1 cut(s) 172
Eco57I CTGAAG 1 cut(s) 274
EcoICRI GAGCTC 1 cut(s) 172
EcoRII CCWGG 1 cut(s) 505
EcoT14I CCWWGG 1 cut(s) 528
EcoT38I GRGCYC 2 cut(s) 15, 174
ErhI CCWWGG 1 cut(s) 528
FaeI CATG 2 cut(s) 184, 532
FaiI YATR 4 cut(s) 182, 255, 311, 530
FalI AAGNNNNNCTT 6 cut(s) 272, 304, 456, 488, 470, 502
FaqI GGGAC 1 cut(s) 546
FatI CATG 2 cut(s) 180, 528
FblI GTMKAC 2 cut(s) 102, 135
Fnu4HI GCNGC 7 cut(s) 196, 199, 301, 389, 394, 397, 519
FokI GGATG 2 cut(s) 280, 464
FriOI GRGCYC 2 cut(s) 15, 174
Fsp4HI GCNGC 7 cut(s) 196, 199, 301, 389, 394, 397, 519
GlaI GCGC 2 cut(s) 387, 392
GluI GCNGC 7 cut(s) 196, 199, 301, 389, 394, 397, 519
HaeII RGCGCY 1 cut(s) 394
HaeIII GGCC 5 cut(s) 147, 195, 226, 276, 505
HapII CCGG 6 cut(s) 84, 192, 241, 346, 356, 425
HgaI GACGC 3 cut(s) 194, 283, 450
HhaI GCGC 2 cut(s) 388, 393
Hin1I GRCGYC 2 cut(s) 186, 483
Hin1II CATG 2 cut(s) 184, 532
Hin6I GCGC 2 cut(s) 386, 391
HinP1I GCGC 2 cut(s) 386, 391
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HinfI GANTC 5 cut(s) 132, 137, 229, 350, 510
HpaII CCGG 6 cut(s) 84, 192, 241, 346, 356, 425
HphI GGTGA 4 cut(s) 46, 199, 230, 345
Hpy166II GTNNAC 2 cut(s) 103, 136
Hpy188I TCNGA 3 cut(s) 131, 317, 440
Hpy8I GTNNAC 2 cut(s) 103, 136
Hpy99I CGWCG 3 cut(s) 92, 219, 444
HpyAV CCTTC 6 cut(s) 37, 212, 242, 368, 412, 472
HpyCH4III ACNGT 4 cut(s) 58, 211, 321, 334
HpyCH4IV ACGT 1 cut(s) 483
HpyCH4V TGCA 3 cut(s) 235, 399, 518
HpyF10VI GCNNNNNNNGC 2 cut(s) 232, 300
HpyF3I CTNAG 3 cut(s) 414, 432, 500
HpySE526I ACGT 1 cut(s) 483
Hsp92I GRCGYC 2 cut(s) 186, 483
Hsp92II CATG 2 cut(s) 184, 532
HspAI GCGC 2 cut(s) 386, 391
KroI GCCGGC 1 cut(s) 83
KroNI GCCGGC 1 cut(s) 85
Kzo9I GATC 5 cut(s) 106, 369, 402, 435, 555
Lsp1109I GCAGC 5 cut(s) 185, 380, 383, 400, 530
LweI GCATC 3 cut(s) 244, 442, 505
MaeII ACGT 1 cut(s) 483
MaeIII GTNAC 2 cut(s) 328, 351
MalI GATC 5 cut(s) 108, 371, 404, 437, 557
MbiI CCGCTC 1 cut(s) 303
MboI GATC 5 cut(s) 106, 369, 402, 435, 555
MboII GAAGA 8 cut(s) 53, 67, 70, 118, 280, 334, 397, 478
MflI RGATCY 1 cut(s) 435
MhlI GDGCHC 3 cut(s) 15, 174, 543
MlyI GAGTC 4 cut(s) 131, 141, 238, 359
MmeI TCCRAC 1 cut(s) 463
MreI CGCCGGCG 1 cut(s) 83
MroNI GCCGGC 1 cut(s) 83
MslI CAYNNNNRTG 1 cut(s) 464
MspA1I CMGCKG 1 cut(s) 198
MspI CCGG 6 cut(s) 84, 192, 241, 346, 356, 425
MspR9I CCNGG 2 cut(s) 347, 507
MteI GCGCNGCGC 1 cut(s) 389
MvaI CCWGG 1 cut(s) 507
MvnI CGCG 1 cut(s) 386
MwoI GCNNNNNNNGC 2 cut(s) 232, 300
NaeI GCCGGC 1 cut(s) 85
NciI CCSGG 1 cut(s) 347
NcoI CCATGG 1 cut(s) 528
NdeII GATC 5 cut(s) 106, 369, 402, 435, 555
NgoMIV GCCGGC 1 cut(s) 83
NlaIII CATG 2 cut(s) 184, 532
NlaIV GGNNCC 3 cut(s) 21, 148, 423
NmeAIII GCCGAG 1 cut(s) 252
NmuCI GTSAC 2 cut(s) 328, 351
OliI CACNNNNGTG 1 cut(s) 464
PceI AGGCCT 1 cut(s) 505
PcsI WCGNNNNNNNCGW 3 cut(s) 96, 120, 165
PdiI GCCGGC 1 cut(s) 85
PfeI GAWTC 1 cut(s) 510
Pfl23II CGTACG 1 cut(s) 141
PfoI TCCNGGA 1 cut(s) 345
PinAI ACCGGT 2 cut(s) 240, 424
PkrI GCNGC 7 cut(s) 197, 200, 302, 390, 395, 398, 520
Ple19I CGATCG 1 cut(s) 109
PleI GAGTC 4 cut(s) 131, 140, 237, 358
PpsI GAGTC 4 cut(s) 131, 140, 237, 358
Psp124BI GAGCTC 1 cut(s) 174
Psp6I CCWGG 1 cut(s) 505
PspGI CCWGG 1 cut(s) 505
PspLI CGTACG 1 cut(s) 141
PspN4I GGNNCC 3 cut(s) 21, 148, 423
PspPI GGNCC 4 cut(s) 146, 165, 274, 595
PsuI RGATCY 1 cut(s) 435
PvuI CGATCG 1 cut(s) 109
RsaI GTAC 2 cut(s) 143, 365
RsaNI GTAC 2 cut(s) 142, 364
RseI CAYNNNNRTG 1 cut(s) 464
SacI GAGCTC 1 cut(s) 174
SalI GTCGAC 1 cut(s) 134
SatI GCNGC 7 cut(s) 196, 199, 301, 389, 394, 397, 519
Sau3AI GATC 5 cut(s) 106, 369, 402, 435, 555
Sau96I GGNCC 4 cut(s) 146, 165, 274, 595
SchI GAGTC 4 cut(s) 131, 141, 238, 359
ScrFI CCNGG 2 cut(s) 347, 507
SduI GDGCHC 3 cut(s) 15, 174, 543
SetI ASST 9 cut(s) 25, 50, 54, 71, 174, 486, 523, 588, 600
SfaNI GCATC 3 cut(s) 244, 442, 505
SgrAI CRCCGGYG 2 cut(s) 83, 240
SinI GGWCC 2 cut(s) 165, 595
SmiMI CAYNNNNRTG 1 cut(s) 464
SseBI AGGCCT 1 cut(s) 505
SsiI CCGC 4 cut(s) 196, 298, 301, 603
SstI GAGCTC 1 cut(s) 174
StuI AGGCCT 1 cut(s) 505
StyD4I CCNGG 2 cut(s) 345, 505
StyI CCWWGG 1 cut(s) 528
TaaI ACNGT 4 cut(s) 58, 211, 321, 334
TaiI ACGT 1 cut(s) 486
TaqI TCGA 6 cut(s) 36, 135, 217, 323, 372, 513
TaqII GACCGA 1 cut(s) 182
TauI GCSGC 2 cut(s) 198, 303
TfiI GAWTC 1 cut(s) 510
TseFI GTSAC 2 cut(s) 328, 351
TseI GCWGC 5 cut(s) 198, 388, 393, 396, 518
Tsp45I GTSAC 2 cut(s) 328, 351
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 88, 203
VpaK11BI GGWCC 2 cut(s) 165, 595
XcmI CCANNNNNNNNNTGG 1 cut(s) 470
XmiI GTMKAC 2 cut(s) 102, 135
ZraI GACGTC 1 cut(s) 484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.