Rmu_sc0017043.1_g000005

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017043.1
OG0000109
Physical Location & Seq
Reverse (-)
14612 .. 15571
960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017043.1_g000005.1.cds

Sequence Viewer

Length: 849 bp
atgggcctctctcctgctcttgtcactgagggagcggtggcactcattggggctacattaggggaggtgttacacctcgacaggccagggattcgcaaggggacagtgagggtttggatccgacatgttttgtcatccctggtgcgtcaggttttccctccttccacttttgatttcacgtctggagcatctgcaacagtgcgattcaagtatgaacgtctcgttggattctgtcgtgtctgtgggatgatggagcacccacgatctggttgtactggagccccagaggcagtggtgatcttagtcggccataaccccaatcctaactcggctagggttccatcctctgatagccaacaagctccgagccttgcggaggtgttggctcaatctccagcaccaaatttgttcgctgctatgcccagatcacttcatattcctggaaagaaaagacctgcagcggtggctttggtgcaatattcaaagcgtaagagaaccagtgttgtgccccctccaactgcttcggttatgttggattttgagtcagaactagctctgaagaataccaatggcatcattctggtgtcccctgctaaaaaggcaaaggttgggcgccccccgggtcggaacaacaaccctaaacctgctagtttgcagcccaggaagctgataactgaggcatccaaacctcggcggaagaggactttcaaggcaattgaactctctccttcttttggagaaggtcgaatggaagcggtccctgaagtagctccaaaacgaaatgtggaggttataccgtcctctagcaatgctcctgagtcgaaggaaagcactctcaagagtgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

282

Amino Acids

30.18

Weight (kDa)

10.52

Isoelectric Point (pI)

58.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 463, 652
AccB1I GGYRCC 1 cut(s) 612
AccB7I CCANNNNNTGG 1 cut(s) 266
AccBSI CCGCTC 1 cut(s) 35
AciI CCGC 5 cut(s) 35, 374, 461, 694, 755
AclWI GGATC 2 cut(s) 112, 125
AcoI YGGCCR 1 cut(s) 307
AcsI RAATTY 1 cut(s) 403
AcuI CTGAAG 2 cut(s) 578, 783
AcyI GRCGYC 1 cut(s) 613
AfaI GTAC 1 cut(s) 274
AfiI CCNNNNNNNGG 5 cut(s) 266, 376, 624, 690, 734
AflIII ACRYGT 1 cut(s) 124
AgsI TTSAA 4 cut(s) 208, 483, 709, 719
AjiI CACGTC 1 cut(s) 180
AjnI CCWGG 4 cut(s) 85, 138, 439, 659
AjuI GAANNNNNNNTTGG 2 cut(s) 207, 239
AluBI AGCT 4 cut(s) 362, 554, 667, 770
AluI AGCT 4 cut(s) 362, 554, 667, 770
Alw21I GWGCWC 1 cut(s) 258
Alw26I GTCTC 1 cut(s) 224
AlwI GGATC 2 cut(s) 112, 125
Ama87I CYCGRG 1 cut(s) 619
AoxI GGCC 3 cut(s) 4, 83, 307
ApeKI GCWGC 3 cut(s) 413, 458, 655
ApoI RAATTY 1 cut(s) 403
AspLEI GCGC 1 cut(s) 615
AspS9I GGNCC 2 cut(s) 4, 757
AsuC2I CCSGG 2 cut(s) 620, 621
AsuHPI GGTGA 1 cut(s) 307
AvaI CYCGRG 1 cut(s) 619
AvaII GGWCC 1 cut(s) 757
BaeGI GKGCMC 1 cut(s) 510
BamHI GGATCC 1 cut(s) 117
BanI GGYRCC 1 cut(s) 612
BanII GRGCYC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 258
BbvI GCAGC 3 cut(s) 400, 470, 667
BccI CCATC 2 cut(s) 244, 349
BciT130I CCWGG 4 cut(s) 87, 140, 441, 661
BcnI CCSGG 2 cut(s) 620, 621
BcoDI GTCTC 1 cut(s) 224
BfaI CTAG 5 cut(s) 333, 551, 648, 804, 847
BfmI CTRYAG 1 cut(s) 456
BfoI RGCGCY 1 cut(s) 616
BfuAI ACCTGC 2 cut(s) 463, 652
BglI GCCNNNNNGGC 1 cut(s) 287
BisI GCNGC 3 cut(s) 414, 459, 656
BlsI GCNGC 3 cut(s) 415, 460, 657
Bme1390I CCNGG 6 cut(s) 87, 140, 441, 620, 621, 661
Bme18I GGWCC 1 cut(s) 757
BmeT110I CYCGRG 1 cut(s) 619
BmgBI CACGTC 1 cut(s) 180
BmgT120I GGNCC 2 cut(s) 4, 757
BmiI GGNNCC 5 cut(s) 119, 280, 339, 614, 759
BmrFI CCNGG 6 cut(s) 87, 140, 441, 620, 621, 661
BmsI GCATC 3 cut(s) 197, 582, 689
BpmI CTGGAG 3 cut(s) 204, 297, 378
BpuEI CTTGAG 1 cut(s) 821
BpuMI CCSGG 2 cut(s) 620, 621
BsaHI GRCGYC 1 cut(s) 613
BsaJI CCNNGG 6 cut(s) 86, 138, 618, 619, 659, 689
Bsc4I CCNNNNNNNGG 5 cut(s) 266, 376, 624, 690, 734
Bse1I ACTGG 2 cut(s) 280, 498
Bse3DI GCAATG 1 cut(s) 814
BseBI CCWGG 4 cut(s) 87, 140, 441, 661
BseDI CCNNGG 6 cut(s) 86, 138, 618, 619, 659, 689
BseGI GGATG 4 cut(s) 134, 252, 341, 680
BseLI CCNNNNNNNGG 5 cut(s) 266, 376, 624, 690, 734
BseMI GCAATG 1 cut(s) 814
BseMII CTCAG 3 cut(s) 18, 666, 807
BseNI ACTGG 2 cut(s) 280, 498
BseSI GKGCMC 1 cut(s) 510
BseXI GCAGC 3 cut(s) 400, 470, 667
BshFI GGCC 3 cut(s) 6, 85, 309
BshNI GGYRCC 1 cut(s) 612
BsiHKAI GWGCWC 1 cut(s) 258
BsiHKCI CYCGRG 1 cut(s) 619
BsiSI CCGG 1 cut(s) 620
BslFI GGGAC 3 cut(s) 115, 571, 743
BslI CCNNNNNNNGG 5 cut(s) 266, 376, 624, 690, 734
BsmAI GTCTC 1 cut(s) 224
BsmBI CGTCTC 1 cut(s) 224
BsmFI GGGAC 3 cut(s) 115, 571, 743
BsnI GGCC 3 cut(s) 6, 85, 309
BsoBI CYCGRG 1 cut(s) 619
Bsp1286I GDGCHC 3 cut(s) 258, 283, 510
Bsp143I GATC 4 cut(s) 117, 263, 297, 425
BspACI CCGC 5 cut(s) 35, 374, 461, 694, 755
BspANI GGCC 3 cut(s) 6, 85, 309
BspCNI CTCAG 3 cut(s) 19, 667, 808
BspLI GGNNCC 5 cut(s) 119, 280, 339, 614, 759
BspMAI CTGCAG 1 cut(s) 460
BspMI ACCTGC 2 cut(s) 463, 652
BspPI GGATC 2 cut(s) 112, 125
BspT107I GGYRCC 1 cut(s) 612
BsrBI CCGCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 814
BsrI ACTGG 2 cut(s) 280, 498
BssECI CCNNGG 6 cut(s) 86, 138, 618, 619, 659, 689
BssMI GATC 4 cut(s) 117, 263, 297, 425
BssNI GRCGYC 1 cut(s) 613
Bst2UI CCWGG 4 cut(s) 87, 140, 441, 661
Bst4CI ACNGT 3 cut(s) 106, 199, 798
Bst6I CTCTTC 1 cut(s) 692
BstACI GRCGYC 1 cut(s) 613
BstDEI CTNAG 4 cut(s) 27, 301, 675, 816
BstENI CCTNNNNNAGG 1 cut(s) 374
BstF5I GGATG 4 cut(s) 134, 252, 341, 680
BstH2I RGCGCY 1 cut(s) 616
BstHHI GCGC 1 cut(s) 615
BstKTI GATC 4 cut(s) 120, 266, 300, 428
BstMAI GTCTC 1 cut(s) 224
BstMBI GATC 4 cut(s) 117, 263, 297, 425
BstMWI GCNNNNNNNGC 4 cut(s) 287, 464, 599, 664
BstNI CCWGG 4 cut(s) 87, 140, 441, 661
BstNSI RCATGY 1 cut(s) 128
BstSCI CCNGG 6 cut(s) 85, 138, 439, 618, 619, 659
BstSFI CTRYAG 1 cut(s) 456
BstSLI GKGCMC 1 cut(s) 510
BstV1I GCAGC 3 cut(s) 400, 470, 667
BstX2I RGATCY 1 cut(s) 117
BstYI RGATCY 1 cut(s) 117
BsuRI GGCC 3 cut(s) 6, 85, 309
BtrI CACGTC 1 cut(s) 180
BtsCI GGATG 4 cut(s) 134, 252, 341, 680
BtsI GCAGTG 1 cut(s) 297
BtsIMutI CAGTG 5 cut(s) 24, 111, 204, 297, 505
BveI ACCTGC 2 cut(s) 463, 652
CfoI GCGC 1 cut(s) 615
Cfr13I GGNCC 2 cut(s) 4, 757
Cfr9I CCCGGG 1 cut(s) 619
CseI GACGC 1 cut(s) 134
Csp6I GTAC 1 cut(s) 273
CviAII CATG 1 cut(s) 125
CviQI GTAC 1 cut(s) 273
DdeI CTNAG 4 cut(s) 27, 301, 675, 816
DinI GGCGCC 1 cut(s) 614
DpnI GATC 4 cut(s) 119, 265, 299, 427
DpnII GATC 4 cut(s) 117, 263, 297, 425
EaeI YGGCCR 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 692
EarI CTCTTC 1 cut(s) 692
EciI GGCGGA 1 cut(s) 709
Eco24I GRGCYC 1 cut(s) 283
Eco47I GGWCC 1 cut(s) 757
Eco57I CTGAAG 2 cut(s) 578, 783
Eco88I CYCGRG 1 cut(s) 619
EcoNI CCTNNNNNAGG 1 cut(s) 374
EcoRII CCWGG 4 cut(s) 85, 138, 439, 659
EcoT38I GRGCYC 1 cut(s) 283
EgeI GGCGCC 1 cut(s) 614
EheI GGCGCC 1 cut(s) 614
Esp3I CGTCTC 1 cut(s) 224
FaeI CATG 1 cut(s) 128
FaiI YATR 7 cut(s) 126, 213, 312, 419, 435, 530, 794
FaqI GGGAC 3 cut(s) 115, 571, 743
FatI CATG 1 cut(s) 124
Fnu4HI GCNGC 3 cut(s) 414, 459, 656
FokI GGATG 4 cut(s) 121, 259, 328, 667
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 3 cut(s) 414, 459, 656
FspBI CTAG 5 cut(s) 333, 551, 648, 804, 847
GlaI GCGC 1 cut(s) 614
GluI GCNGC 3 cut(s) 414, 459, 656
GsuI CTGGAG 3 cut(s) 204, 297, 378
HaeII RGCGCY 1 cut(s) 616
HaeIII GGCC 3 cut(s) 6, 85, 309
HapII CCGG 1 cut(s) 620
HgaI GACGC 1 cut(s) 134
HhaI GCGC 1 cut(s) 615
Hin1I GRCGYC 1 cut(s) 613
Hin1II CATG 1 cut(s) 128
Hin6I GCGC 1 cut(s) 613
HinP1I GCGC 1 cut(s) 613
HinfI GANTC 5 cut(s) 91, 204, 228, 542, 818
HpaII CCGG 1 cut(s) 620
HphI GGTGA 1 cut(s) 307
Hpy188I TCNGA 6 cut(s) 122, 349, 366, 547, 558, 627
Hpy188III TCNNGA 3 cut(s) 183, 815, 838
HpyAV CCTTC 4 cut(s) 171, 734, 738, 817
HpyCH4III ACNGT 3 cut(s) 106, 199, 798
HpyCH4IV ACGT 2 cut(s) 179, 217
HpyCH4V TGCA 4 cut(s) 194, 458, 475, 655
HpyF10VI GCNNNNNNNGC 4 cut(s) 287, 464, 599, 664
HpyF3I CTNAG 4 cut(s) 27, 301, 675, 816
HpySE526I ACGT 2 cut(s) 179, 217
Hsp92I GRCGYC 1 cut(s) 613
Hsp92II CATG 1 cut(s) 128
HspAI GCGC 1 cut(s) 613
KasI GGCGCC 1 cut(s) 612
Kzo9I GATC 4 cut(s) 117, 263, 297, 425
LmnI GCTCC 7 cut(s) 32, 185, 253, 278, 367, 775, 817
Lsp1109I GCAGC 3 cut(s) 400, 470, 667
LweI GCATC 3 cut(s) 197, 582, 689
MaeI CTAG 5 cut(s) 333, 551, 648, 804, 847
MaeII ACGT 2 cut(s) 179, 217
MaeIII GTNAC 2 cut(s) 22, 69
MalI GATC 4 cut(s) 119, 265, 299, 427
MbiI CCGCTC 1 cut(s) 35
MboI GATC 4 cut(s) 117, 263, 297, 425
MboII GAAGA 2 cut(s) 571, 709
MfeI CAATTG 1 cut(s) 714
MflI RGATCY 1 cut(s) 117
MhlI GDGCHC 3 cut(s) 258, 283, 510
MluCI AATT 2 cut(s) 403, 714
Mly113I GGCGCC 1 cut(s) 613
MlyI GAGTC 2 cut(s) 551, 827
MmeI TCCRAC 5 cut(s) 145, 205, 513, 539, 605
MslI CAYNNNNRTG 1 cut(s) 581
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 1 cut(s) 620
MspR9I CCNGG 6 cut(s) 87, 140, 441, 620, 621, 661
MunI CAATTG 1 cut(s) 714
MvaI CCWGG 4 cut(s) 87, 140, 441, 661
MwoI GCNNNNNNNGC 4 cut(s) 287, 464, 599, 664
NarI GGCGCC 1 cut(s) 613
NciI CCSGG 2 cut(s) 620, 621
NdeII GATC 4 cut(s) 117, 263, 297, 425
NlaIII CATG 1 cut(s) 128
NlaIV GGNNCC 5 cut(s) 119, 280, 339, 614, 759
NmeAIII GCCGAG 2 cut(s) 308, 670
NmuCI GTSAC 1 cut(s) 22
NspI RCATGY 1 cut(s) 128
PciI ACATGT 1 cut(s) 124
PfeI GAWTC 3 cut(s) 91, 204, 228
PflMI CCANNNNNTGG 1 cut(s) 266
PfoI TCCNGGA 1 cut(s) 439
PkrI GCNGC 3 cut(s) 415, 460, 657
PleI GAGTC 2 cut(s) 550, 826
PluTI GGCGCC 1 cut(s) 616
PpsI GAGTC 2 cut(s) 550, 826
PscI ACATGT 1 cut(s) 124
Psp6I CCWGG 4 cut(s) 85, 138, 439, 659
PspGI CCWGG 4 cut(s) 85, 138, 439, 659
PspN4I GGNNCC 5 cut(s) 119, 280, 339, 614, 759
PspPI GGNCC 2 cut(s) 4, 757
PstI CTGCAG 1 cut(s) 460
PsuI RGATCY 1 cut(s) 117
RsaI GTAC 1 cut(s) 274
RsaNI GTAC 1 cut(s) 273
RseI CAYNNNNRTG 1 cut(s) 581
SatI GCNGC 3 cut(s) 414, 459, 656
Sau3AI GATC 4 cut(s) 117, 263, 297, 425
Sau96I GGNCC 2 cut(s) 4, 757
SchI GAGTC 2 cut(s) 551, 827
ScrFI CCNGG 6 cut(s) 87, 140, 441, 620, 621, 661
SduI GDGCHC 3 cut(s) 258, 283, 510
SfaNI GCATC 3 cut(s) 197, 582, 689
SfcI CTRYAG 1 cut(s) 456
SfoI GGCGCC 1 cut(s) 614
SinI GGWCC 1 cut(s) 757
SmaI CCCGGG 1 cut(s) 621
SmiMI CAYNNNNRTG 1 cut(s) 581
SmlI CTYRAG 1 cut(s) 836
SmoI CTYRAG 1 cut(s) 836
Sse9I AATT 2 cut(s) 403, 714
SsiI CCGC 5 cut(s) 35, 374, 461, 694, 755
SspDI GGCGCC 1 cut(s) 612
SspI AATATT 1 cut(s) 479
SspMI CTAG 5 cut(s) 333, 551, 648, 804, 847
StyD4I CCNGG 6 cut(s) 85, 138, 439, 618, 619, 659
TaaI ACNGT 3 cut(s) 106, 199, 798
TaiI ACGT 2 cut(s) 182, 220
TaqI TCGA 3 cut(s) 78, 745, 821
TasI AATT 2 cut(s) 403, 714
TatI WGTACW 1 cut(s) 272
TfiI GAWTC 3 cut(s) 91, 204, 228
TscAI CASTG 5 cut(s) 31, 111, 204, 297, 505
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 3 cut(s) 413, 458, 655
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 2 cut(s) 228, 422
TspMI CCCGGG 1 cut(s) 619
TspRI CASTG 5 cut(s) 31, 111, 204, 297, 505
Van91I CCANNNNNTGG 1 cut(s) 266
VpaK11BI GGWCC 1 cut(s) 757
XagI CCTNNNNNAGG 1 cut(s) 374
XapI RAATTY 1 cut(s) 403
XceI RCATGY 1 cut(s) 128
XmaI CCCGGG 1 cut(s) 619
XspI CTAG 5 cut(s) 333, 551, 648, 804, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.