FvH4_6g07931

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000109
Physical Location & Seq
Forward (+)
4724990 .. 4726292
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g07931.t1

Sequence Viewer

Length: 978 bp
ATGTTTGCCCTAGCCAACTACAATGGGAGGACATCGGCGGATGCAGTGCCGATCAACACCATGCCTGTTTGGGTGGAAATATTTGGTCTCCCTCCGGATCTGCGGACCAAGGAGGCACTCTTCATGGTTGGTGCAACCCTAGGGACCATCATTCAACCGGATCTTTCAAATCTGAAATCTGGTGCTAGGGCAAGAATCCGAATTGAGCATCGTCTTGATTCTCCGGTCAAGCAAGCCTACCCTCCGATGGTGTTTGAATTTGGGGAAGGTAATGATCTTACTTCTGCTTGGTTAACCTTCAAATATGAGAGGATGTGTGGGTTTTGTCGGATCTGTGGGCTGTTGGAGCATCCGGTGAGTGGCTGCTATGGACCGCCGGATATATCAGCGGCTGTGAGGATAGGTGCACCGACTGGTAACCCTAACCTTAGCAGTTCAGCTAGTCCATCTGGTCCACCTCTGAACCCTTTTCAGAATATTGGTTCACGTCCAGTGCAGCCCAGGCTAGCTTCAGTGCAACCATTGGTGTTCAGGCAGGTGGTGGAGTCTCCGTCGGTGCCCGTTTCCCGGGAGATTGTTCTCTCTACCAAGATGATCTCAGGGACTAAGAGGAATGCGTCCTCGTTGATGGAAGTTGATTTGGGCAAACGCCCTAGGGGTCCTCCAACTGTGCTTGAAGCTGCCAACGACGACTTGGGGCCTGTGTTGGAGCTGTCTCTTCCTAACTTTGCAGGTACTCTCATTGTTTCTCCCCTAAAGAAACAGAAAGTCGGACGTCCAGAGGGTTCCAAGAACAGGTCCAAGGAGGAAGATATCCCTCTATGGAAGCTTAAGATTAATGCGAATGCAAAAAAGTTAAAGACTAAGAAGCGCATTCAAGAGGTGAAACGCATGCTAGAATTGGAAGGGACACTAGTTATGCAGACTGACCAGGAGAAGGTGGTATTGGAGGAATCCGGGGAAACCTCCTCTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

326

Amino Acids

35.44

Weight (kDa)

9.31

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 95 - 122 5.8e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 526
AatII GACGTC 1 cut(s) 778
Acc36I ACCTGC 2 cut(s) 526, 722
AccB1I GGYRCC 1 cut(s) 556
AccIII TCCGGA 1 cut(s) 94
AciI CCGC 4 cut(s) 38, 103, 374, 389
AclWI GGATC 3 cut(s) 105, 168, 338
AcsI RAATTY 1 cut(s) 257
AcuI CTGAAG 1 cut(s) 495
AcyI GRCGYC 1 cut(s) 775
AfaI GTAC 1 cut(s) 736
AfiI CCNNNNNNNGG 5 cut(s) 247, 359, 567, 795, 937
AflII CTTAAG 1 cut(s) 830
AgsI TTSAA 6 cut(s) 155, 168, 257, 301, 677, 878
AhlI ACTAGT 1 cut(s) 913
AjiI CACGTC 1 cut(s) 488
AjnI CCWGG 2 cut(s) 500, 930
AjuI GAANNNNNNNTTGG 2 cut(s) 929, 961
AluBI AGCT 5 cut(s) 440, 509, 680, 712, 829
AluI AGCT 5 cut(s) 440, 509, 680, 712, 829
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 3 cut(s) 92, 552, 720
Alw44I GTGCAC 1 cut(s) 405
AlwI GGATC 3 cut(s) 105, 168, 338
AlwNI CAGNNNCTG 1 cut(s) 392
Ama87I CYCGRG 1 cut(s) 567
Aor13HI TCCGGA 1 cut(s) 94
AoxI GGCC 1 cut(s) 698
ApaLI GTGCAC 1 cut(s) 405
ApeKI GCWGC 3 cut(s) 363, 496, 680
ApoI RAATTY 1 cut(s) 257
AseI ATTAAT 1 cut(s) 837
AspA2I CCTAGG 2 cut(s) 139, 653
AspLEI GCGC 1 cut(s) 873
AspS9I GGNCC 7 cut(s) 105, 144, 371, 452, 659, 698, 798
AsuC2I CCSGG 3 cut(s) 568, 569, 958
AsuHPI GGTGA 2 cut(s) 367, 895
AsuNHI GCTAGC 1 cut(s) 505
AvaI CYCGRG 1 cut(s) 567
AvaII GGWCC 6 cut(s) 105, 144, 371, 452, 659, 798
AvrII CCTAGG 2 cut(s) 139, 653
BaeGI GKGCMC 2 cut(s) 409, 561
BanI GGYRCC 1 cut(s) 556
Bbv12I GWGCWC 1 cut(s) 409
BbvI GCAGC 3 cut(s) 350, 508, 667
BccI CCATC 4 cut(s) 155, 241, 454, 622
BciT130I CCWGG 2 cut(s) 502, 932
BcnI CCSGG 3 cut(s) 568, 569, 958
BcoDI GTCTC 3 cut(s) 92, 552, 720
BcuI ACTAGT 1 cut(s) 913
BfaI CTAG 8 cut(s) 11, 140, 186, 441, 506, 654, 896, 914
BfrI CTTAAG 1 cut(s) 830
BfuAI ACCTGC 2 cut(s) 526, 722
BisI GCNGC 4 cut(s) 364, 390, 497, 681
BlnI CCTAGG 2 cut(s) 139, 653
BlsI GCNGC 4 cut(s) 365, 391, 498, 682
Bme1390I CCNGG 5 cut(s) 502, 568, 569, 932, 958
Bme18I GGWCC 6 cut(s) 105, 144, 371, 452, 659, 798
BmeT110I CYCGRG 1 cut(s) 567
BmgBI CACGTC 1 cut(s) 488
BmgT120I GGNCC 7 cut(s) 105, 144, 371, 452, 659, 698, 798
BmiI GGNNCC 5 cut(s) 145, 558, 660, 699, 787
BmrFI CCNGG 5 cut(s) 502, 568, 569, 932, 958
BmsI GCATC 3 cut(s) 31, 217, 358
BmtI GCTAGC 1 cut(s) 509
Bpu10I CCTNAGC 1 cut(s) 428
BpuMI CCSGG 3 cut(s) 568, 569, 958
BsaHI GRCGYC 1 cut(s) 775
BsaI GGTCTC 1 cut(s) 92
BsaJI CCNNGG 7 cut(s) 108, 139, 500, 567, 653, 801, 957
BsaWI WCCGGW 4 cut(s) 94, 157, 223, 352
BsaXI ACNNNNNCTCC 2 cut(s) 536, 566
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 359, 567, 795, 937
Bse1I ACTGG 2 cut(s) 418, 491
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 2 cut(s) 502, 932
BseDI CCNNGG 7 cut(s) 108, 139, 500, 567, 653, 801, 957
BseGI GGATG 3 cut(s) 46, 318, 349
BseLI CCNNNNNNNGG 5 cut(s) 247, 359, 567, 795, 937
BseMII CTCAG 1 cut(s) 612
BseNI ACTGG 2 cut(s) 418, 491
BseRI GAGGAG 1 cut(s) 958
BseSI GKGCMC 2 cut(s) 409, 561
BseXI GCAGC 3 cut(s) 350, 508, 667
BsgI GTGCAG 1 cut(s) 515
BshFI GGCC 1 cut(s) 700
BshNI GGYRCC 1 cut(s) 556
BsiHKAI GWGCWC 1 cut(s) 409
BsiHKCI CYCGRG 1 cut(s) 567
BsiSI CCGG 7 cut(s) 95, 158, 224, 353, 377, 568, 957
BslFI GGGAC 3 cut(s) 157, 616, 922
BslI CCNNNNNNNGG 5 cut(s) 247, 359, 567, 795, 937
BsmAI GTCTC 3 cut(s) 92, 552, 720
BsmFI GGGAC 3 cut(s) 157, 616, 922
BsmI GAATGC 3 cut(s) 619, 850, 873
BsnI GGCC 1 cut(s) 700
Bso31I GGTCTC 1 cut(s) 92
BsoBI CYCGRG 1 cut(s) 567
Bsp1286I GDGCHC 2 cut(s) 409, 561
Bsp13I TCCGGA 1 cut(s) 94
Bsp143I GATC 6 cut(s) 51, 97, 160, 274, 330, 594
BspACI CCGC 4 cut(s) 38, 103, 374, 389
BspANI GGCC 1 cut(s) 700
BspCNI CTCAG 1 cut(s) 611
BspEI TCCGGA 1 cut(s) 94
BspLI GGNNCC 5 cut(s) 145, 558, 660, 699, 787
BspMI ACCTGC 2 cut(s) 526, 722
BspOI GCTAGC 1 cut(s) 509
BspPI GGATC 3 cut(s) 105, 168, 338
BspT107I GGYRCC 1 cut(s) 556
BspTI CTTAAG 1 cut(s) 830
BspTNI GGTCTC 1 cut(s) 92
BsrI ACTGG 2 cut(s) 418, 491
BssECI CCNNGG 7 cut(s) 108, 139, 500, 567, 653, 801, 957
BssMI GATC 6 cut(s) 51, 97, 160, 274, 330, 594
BssNI GRCGYC 1 cut(s) 775
BssT1I CCWWGG 4 cut(s) 108, 139, 653, 801
Bst2UI CCWGG 2 cut(s) 502, 932
Bst4CI ACNGT 1 cut(s) 670
Bst6I CTCTTC 2 cut(s) 125, 723
BstACI GRCGYC 1 cut(s) 775
BstAFI CTTAAG 1 cut(s) 830
BstC8I GCNNGC 3 cut(s) 234, 507, 893
BstDEI CTNAG 4 cut(s) 428, 598, 606, 864
BstEII GGTNACC 1 cut(s) 416
BstF5I GGATG 3 cut(s) 46, 318, 349
BstHHI GCGC 1 cut(s) 873
BstKTI GATC 6 cut(s) 54, 100, 163, 277, 333, 597
BstMAI GTCTC 3 cut(s) 92, 552, 720
BstMBI GATC 6 cut(s) 51, 97, 160, 274, 330, 594
BstMWI GCNNNNNNNGC 2 cut(s) 346, 502
BstNI CCWGG 2 cut(s) 502, 932
BstNSI RCATGY 1 cut(s) 895
BstPI GGTNACC 1 cut(s) 416
BstSCI CCNGG 5 cut(s) 500, 566, 567, 930, 956
BstSLI GKGCMC 2 cut(s) 409, 561
BstV1I GCAGC 3 cut(s) 350, 508, 667
BstX2I RGATCY 3 cut(s) 97, 160, 330
BstYI RGATCY 3 cut(s) 97, 160, 330
BsuRI GGCC 1 cut(s) 700
BtrI CACGTC 1 cut(s) 488
BtsCI GGATG 3 cut(s) 46, 318, 349
BtsI GCAGTG 1 cut(s) 51
BtsIMutI CAGTG 3 cut(s) 51, 498, 519
BveI ACCTGC 2 cut(s) 526, 722
Cac8I GCNNGC 3 cut(s) 234, 507, 893
CaiI CAGNNNCTG 1 cut(s) 392
CfoI GCGC 1 cut(s) 873
Cfr13I GGNCC 7 cut(s) 105, 144, 371, 452, 659, 698, 798
Cfr9I CCCGGG 1 cut(s) 567
CseI GACGC 1 cut(s) 606
Csp6I GTAC 1 cut(s) 735
CviAII CATG 3 cut(s) 61, 124, 892
CviQI GTAC 1 cut(s) 735
DdeI CTNAG 4 cut(s) 428, 598, 606, 864
DpnI GATC 6 cut(s) 53, 99, 162, 276, 332, 596
DpnII GATC 6 cut(s) 51, 97, 160, 274, 330, 594
Eam1104I CTCTTC 2 cut(s) 125, 723
EarI CTCTTC 2 cut(s) 125, 723
EciI GGCGGA 1 cut(s) 53
Eco130I CCWWGG 4 cut(s) 108, 139, 653, 801
Eco31I GGTCTC 1 cut(s) 92
Eco32I GATATC 1 cut(s) 814
Eco47I GGWCC 6 cut(s) 105, 144, 371, 452, 659, 798
Eco57I CTGAAG 1 cut(s) 495
Eco88I CYCGRG 1 cut(s) 567
Eco91I GGTNACC 1 cut(s) 416
EcoO109I RGGNCCY 2 cut(s) 659, 698
EcoO65I GGTNACC 1 cut(s) 416
EcoRII CCWGG 2 cut(s) 500, 930
EcoRV GATATC 1 cut(s) 814
EcoT14I CCWWGG 4 cut(s) 108, 139, 653, 801
ErhI CCWWGG 4 cut(s) 108, 139, 653, 801
FaeI CATG 3 cut(s) 64, 127, 895
FaiI YATR 8 cut(s) 62, 125, 306, 369, 383, 823, 893, 920
FaqI GGGAC 3 cut(s) 157, 616, 922
FatI CATG 3 cut(s) 60, 123, 891
Fnu4HI GCNGC 4 cut(s) 364, 390, 497, 681
FokI GGATG 3 cut(s) 53, 325, 336
Fsp4HI GCNGC 4 cut(s) 364, 390, 497, 681
FspBI CTAG 8 cut(s) 11, 140, 186, 441, 506, 654, 896, 914
GlaI GCGC 1 cut(s) 872
GluI GCNGC 4 cut(s) 364, 390, 497, 681
HaeIII GGCC 1 cut(s) 700
HapII CCGG 7 cut(s) 95, 158, 224, 353, 377, 568, 957
HgaI GACGC 1 cut(s) 606
HhaI GCGC 1 cut(s) 873
Hin1I GRCGYC 1 cut(s) 775
Hin1II CATG 3 cut(s) 64, 127, 895
Hin6I GCGC 1 cut(s) 871
HinP1I GCGC 1 cut(s) 871
HincII GTYRAC 1 cut(s) 294
HindII GTYRAC 1 cut(s) 294
HindIII AAGCTT 1 cut(s) 827
HinfI GANTC 4 cut(s) 195, 218, 545, 953
HpaI GTTAAC 1 cut(s) 294
HpaII CCGG 7 cut(s) 95, 158, 224, 353, 377, 568, 957
HphI GGTGA 2 cut(s) 367, 895
Hpy166II GTNNAC 4 cut(s) 294, 407, 455, 485
Hpy188I TCNGA 7 cut(s) 174, 200, 246, 330, 462, 474, 773
Hpy188III TCNNGA 4 cut(s) 95, 215, 779, 878
Hpy8I GTNNAC 4 cut(s) 294, 407, 455, 485
Hpy99I CGWCG 2 cut(s) 556, 692
HpyAV CCTTC 4 cut(s) 260, 307, 899, 931
HpyCH4III ACNGT 1 cut(s) 670
HpyCH4IV ACGT 2 cut(s) 487, 775
HpyCH4V TGCA 8 cut(s) 44, 134, 407, 496, 517, 731, 848, 922
HpyF10VI GCNNNNNNNGC 2 cut(s) 346, 502
HpyF3I CTNAG 4 cut(s) 428, 598, 606, 864
HpySE526I ACGT 2 cut(s) 487, 775
Hsp92I GRCGYC 1 cut(s) 775
Hsp92II CATG 3 cut(s) 64, 127, 895
HspAI GCGC 1 cut(s) 871
Kpn2I TCCGGA 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 294
Kzo9I GATC 6 cut(s) 51, 97, 160, 274, 330, 594
LmnI GCTCC 2 cut(s) 346, 709
Lsp1109I GCAGC 3 cut(s) 350, 508, 667
LweI GCATC 3 cut(s) 31, 217, 358
MaeI CTAG 8 cut(s) 11, 140, 186, 441, 506, 654, 896, 914
MaeII ACGT 2 cut(s) 487, 775
MaeIII GTNAC 1 cut(s) 416
MalI GATC 6 cut(s) 53, 99, 162, 276, 332, 596
MboI GATC 6 cut(s) 51, 97, 160, 274, 330, 594
MboII GAAGA 3 cut(s) 112, 710, 821
MflI RGATCY 3 cut(s) 97, 160, 330
MhlI GDGCHC 2 cut(s) 409, 561
MluCI AATT 3 cut(s) 201, 257, 899
MlyI GAGTC 1 cut(s) 554
MmeI TCCRAC 5 cut(s) 308, 324, 687, 689, 751
MroI TCCGGA 1 cut(s) 94
MseI TTAA 4 cut(s) 293, 831, 837, 857
MspA1I CMGCKG 1 cut(s) 389
MspCI CTTAAG 1 cut(s) 830
MspI CCGG 7 cut(s) 95, 158, 224, 353, 377, 568, 957
MspR9I CCNGG 5 cut(s) 502, 568, 569, 932, 958
Mva1269I GAATGC 3 cut(s) 619, 850, 873
MvaI CCWGG 2 cut(s) 502, 932
MwoI GCNNNNNNNGC 2 cut(s) 346, 502
NciI CCSGG 3 cut(s) 568, 569, 958
NdeII GATC 6 cut(s) 51, 97, 160, 274, 330, 594
NheI GCTAGC 1 cut(s) 505
NlaIII CATG 3 cut(s) 64, 127, 895
NlaIV GGNNCC 5 cut(s) 145, 558, 660, 699, 787
NspI RCATGY 1 cut(s) 895
PaeI GCATGC 1 cut(s) 895
PaqCI CACCTGC 1 cut(s) 526
PctI GAATGC 3 cut(s) 619, 850, 873
PfeI GAWTC 3 cut(s) 195, 218, 953
PkrI GCNGC 4 cut(s) 365, 391, 498, 682
PleI GAGTC 1 cut(s) 553
PpsI GAGTC 1 cut(s) 553
PpuMI RGGWCCY 1 cut(s) 659
PshBI ATTAAT 1 cut(s) 837
Psp5II RGGWCCY 1 cut(s) 659
Psp6I CCWGG 2 cut(s) 500, 930
PspEI GGTNACC 1 cut(s) 416
PspGI CCWGG 2 cut(s) 500, 930
PspN4I GGNNCC 5 cut(s) 145, 558, 660, 699, 787
PspPI GGNCC 7 cut(s) 105, 144, 371, 452, 659, 698, 798
PspPPI RGGWCCY 1 cut(s) 659
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 3 cut(s) 97, 160, 330
RsaI GTAC 1 cut(s) 736
RsaNI GTAC 1 cut(s) 735
SaqAI TTAA 4 cut(s) 293, 831, 837, 857
SatI GCNGC 4 cut(s) 364, 390, 497, 681
Sau3AI GATC 6 cut(s) 51, 97, 160, 274, 330, 594
Sau96I GGNCC 7 cut(s) 105, 144, 371, 452, 659, 698, 798
SchI GAGTC 1 cut(s) 554
ScrFI CCNGG 5 cut(s) 502, 568, 569, 932, 958
SduI GDGCHC 2 cut(s) 409, 561
SfaNI GCATC 3 cut(s) 31, 217, 358
SinI GGWCC 6 cut(s) 105, 144, 371, 452, 659, 798
SmaI CCCGGG 1 cut(s) 569
SmlI CTYRAG 1 cut(s) 830
SmoI CTYRAG 1 cut(s) 830
SpeI ACTAGT 1 cut(s) 913
SphI GCATGC 1 cut(s) 895
Sse9I AATT 3 cut(s) 201, 257, 899
SsiI CCGC 4 cut(s) 38, 103, 374, 389
SspI AATATT 2 cut(s) 81, 478
SspMI CTAG 8 cut(s) 11, 140, 186, 441, 506, 654, 896, 914
StyD4I CCNGG 5 cut(s) 500, 566, 567, 930, 956
StyI CCWWGG 4 cut(s) 108, 139, 653, 801
TaaI ACNGT 1 cut(s) 670
TaiI ACGT 2 cut(s) 490, 778
TasI AATT 3 cut(s) 201, 257, 899
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 3 cut(s) 195, 218, 953
Tru1I TTAA 4 cut(s) 293, 831, 837, 857
Tru9I TTAA 4 cut(s) 293, 831, 837, 857
TscAI CASTG 3 cut(s) 51, 498, 519
TseI GCWGC 3 cut(s) 363, 496, 680
TspDTI ATGAA 1 cut(s) 112
TspGWI ACGGA 1 cut(s) 540
TspMI CCCGGG 1 cut(s) 567
TspRI CASTG 3 cut(s) 51, 498, 519
Vha464I CTTAAG 1 cut(s) 830
VneI GTGCAC 1 cut(s) 405
VpaK11BI GGWCC 6 cut(s) 105, 144, 371, 452, 659, 798
VspI ATTAAT 1 cut(s) 837
XapI RAATTY 1 cut(s) 257
XceI RCATGY 1 cut(s) 895
XcmI CCANNNNNNNNNTGG 1 cut(s) 691
XmaI CCCGGG 1 cut(s) 567
XmaJI CCTAGG 2 cut(s) 139, 653
XspI CTAG 8 cut(s) 11, 140, 186, 441, 506, 654, 896, 914
ZraI GACGTC 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.