Rroxscaffold_7G00196110

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000109
Physical Location & Seq
Forward (+)
38780424 .. 38792900
12477 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00196110.1

Sequence Viewer

Length: 1122 bp
ATGTTTCCTCAAAATAATAATGAACCAAGTTACTTGCCTACTTTTGCCAATGCTGCTGGTAATTTTCCAAGTCGAATTCATGGTGATACTCTTTTTGTCTATCCATATCTTCGAGGTCCAAATTCTCAAGGAAACATGCACCGTAAATCTCCAAATCATGAAGATGTTTCTTTATCTCAAGCCACCTCTAGTAGACCAACACCTGAATATGGCCTTGATACTCATCATGCTAAACCAATGAACACTTCATCTACTTGGGGTGCGTTCTTTAGTGATGCTTTAAGATCTATACCTCAAGATGCTAATGTTATCATACATGCAGCTGAAGTTGCTGATCCTTTAGTTGTTGTCCCTCCTATTGAAGAACCCATTCCCCTATCATACCTCCTGTATACTTTTTATGATCCTACTGAGGCTCCATATAATAGCTTCTTAAGAACTCTTGAGAATCCAGTTTATATTGACTTGAATCTCCCTGTGAATACATTGAATAAGAAGGATGATATCCTTGATTCAAATATTCATGCTAAAGCTCACTCTGCCTCTGATAATGAAGTCTTTGCACCTGCACTTTCTCACTCTACCCTAGTCAAGATATTGAGACCATGGCTATCACTAAGGTGGGGAAGAAATCAAAGTCTTTGGTTCCTTGCCCGGTTGCAAACCGGGTGGACCTCGGCTTGTGCTGGAACTAGCTATCCCAAATCCCAACTAGGTGCCAAGACCAAGCAAAAGATGGAACTCATCCATTCTTGGAAGCTTGTTGCATTTGGTTCAAAGAAACAGAAGAAGAGAACTTCTAGCACTACTAAACGTGCTCGGGAGATGGATGATGATCTGGTGGAGACTGCAACAGTAGTAGAGGAAGACACTTCTATGGGTTTTGGTACTTGCAAGGCAACCACGACAGTAGGTCTTCAAAGCTCCAAGGATGTAAGGAGATTTCTAGGCAGCTCACAGTGGCAGGGATTGAAGGGACGACTGCCATCCTCCTTTGCTTTGATGAGAAAACATAGAAATATAGAACTAAGGGAGTTGTGGATGAATTGTAGAGAGAGAATTGATCGTGGTGTTTCTGAATTGGGCGGTACCCTCGGATGGTTTAAGACGACTAGCCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

373

Amino Acids

41.87

Weight (kDa)

9.28

Isoelectric Point (pI)

56.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 574
Acc36I ACCTGC 1 cut(s) 574
Acc65I GGTACC 1 cut(s) 1088
AccB1I GGYRCC 2 cut(s) 716, 1088
AccI GTMKAC 2 cut(s) 193, 392
AciI CCGC 1 cut(s) 1086
AclWI GGATC 2 cut(s) 329, 398
AcsI RAATTY 2 cut(s) 75, 121
AcuI CTGAAG 1 cut(s) 345
AfaI GTAC 2 cut(s) 889, 1090
AfiI CCNNNNNNNGG 2 cut(s) 209, 1098
AflII CTTAAG 1 cut(s) 433
AgsI TTSAA 7 cut(s) 362, 469, 490, 516, 777, 920, 973
AhdI GACNNNNNGTC 1 cut(s) 912
AjuI GAANNNNNNNTTGG 2 cut(s) 229, 261
AleI CACNNNNGTG 1 cut(s) 619
AloI GAACNNNNNNTCC 2 cut(s) 682, 714
AluBI AGCT 7 cut(s) 323, 429, 533, 696, 760, 924, 954
AluI AGCT 7 cut(s) 323, 429, 533, 696, 760, 924, 954
Alw21I GWGCWC 1 cut(s) 820
Alw26I GTCTC 2 cut(s) 595, 839
AlwI GGATC 2 cut(s) 329, 398
Ama87I CYCGRG 1 cut(s) 819
AoxI GGCC 1 cut(s) 211
ApeKI GCWGC 3 cut(s) 53, 320, 951
ApoI RAATTY 2 cut(s) 75, 121
Asp700I GAANNNNTTC 1 cut(s) 369
Asp718I GGTACC 1 cut(s) 1088
AspS9I GGNCC 2 cut(s) 116, 672
AsuC2I CCSGG 2 cut(s) 655, 667
AsuHPI GGTGA 1 cut(s) 95
AvaI CYCGRG 1 cut(s) 819
AvaII GGWCC 2 cut(s) 116, 672
BanI GGYRCC 2 cut(s) 716, 1088
BbsI GAAGAC 2 cut(s) 873, 908
Bbv12I GWGCWC 1 cut(s) 820
BbvI GCAGC 3 cut(s) 40, 332, 963
BccI CCATC 4 cut(s) 730, 820, 994, 1092
BcnI CCSGG 2 cut(s) 655, 667
BcoDI GTCTC 2 cut(s) 595, 839
BfaI CTAG 7 cut(s) 189, 587, 693, 713, 801, 947, 1113
BfrI CTTAAG 1 cut(s) 433
BfuAI ACCTGC 1 cut(s) 574
BglII AGATCT 1 cut(s) 284
BisI GCNGC 3 cut(s) 54, 321, 952
BlsI GCNGC 3 cut(s) 55, 322, 953
Bme1390I CCNGG 2 cut(s) 655, 667
Bme18I GGWCC 2 cut(s) 116, 672
BmeRI GACNNNNNGTC 1 cut(s) 912
BmeT110I CYCGRG 1 cut(s) 819
BmgT120I GGNCC 2 cut(s) 116, 672
BmiI GGNNCC 4 cut(s) 417, 647, 718, 1090
BmrFI CCNGG 2 cut(s) 655, 667
BmsI GCATC 2 cut(s) 265, 289
BpiI GAAGAC 2 cut(s) 873, 908
BpuEI CTTGAG 4 cut(s) 111, 162, 279, 464
BpuMI CCSGG 2 cut(s) 655, 667
BsaBI GATNNNNATC 2 cut(s) 222, 834
BsaI GGTCTC 1 cut(s) 595
BsaJI CCNNGG 4 cut(s) 605, 675, 927, 1093
BsaXI ACNNNNNCTCC 2 cut(s) 400, 430
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 1098
Bse118I RCCGGY 1 cut(s) 1116
Bse1I ACTGG 1 cut(s) 452
Bse8I GATNNNNATC 2 cut(s) 222, 834
BseDI CCNNGG 4 cut(s) 605, 675, 927, 1093
BseGI GGATG 7 cut(s) 505, 744, 835, 937, 986, 1047, 1103
BseJI GATNNNNATC 2 cut(s) 222, 834
BseLI CCNNNNNNNGG 2 cut(s) 209, 1098
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 1 cut(s) 452
BseXI GCAGC 3 cut(s) 40, 332, 963
BsgI GTGCAG 1 cut(s) 552
BshFI GGCC 1 cut(s) 213
BshNI GGYRCC 2 cut(s) 716, 1088
BsiHKAI GWGCWC 1 cut(s) 820
BsiHKCI CYCGRG 1 cut(s) 819
BsiSI CCGG 3 cut(s) 655, 666, 1117
BslFI GGGAC 2 cut(s) 335, 990
BslI CCNNNNNNNGG 2 cut(s) 209, 1098
BsmAI GTCTC 2 cut(s) 595, 839
BsmFI GGGAC 2 cut(s) 335, 990
BsnI GGCC 1 cut(s) 213
Bso31I GGTCTC 1 cut(s) 595
BsoBI CYCGRG 1 cut(s) 819
Bsp1286I GDGCHC 1 cut(s) 820
Bsp143I GATC 5 cut(s) 284, 334, 403, 835, 1063
Bsp19I CCATGG 1 cut(s) 605
BspACI CCGC 1 cut(s) 1086
BspANI GGCC 1 cut(s) 213
BspCNI CTCAG 1 cut(s) 403
BspHI TCATGA 1 cut(s) 157
BspLI GGNNCC 4 cut(s) 417, 647, 718, 1090
BspMI ACCTGC 1 cut(s) 574
BspPI GGATC 2 cut(s) 329, 398
BspT107I GGYRCC 2 cut(s) 716, 1088
BspTI CTTAAG 1 cut(s) 433
BspTNI GGTCTC 1 cut(s) 595
BsrFI RCCGGY 1 cut(s) 1116
BsrI ACTGG 1 cut(s) 452
BssAI RCCGGY 1 cut(s) 1116
BssECI CCNNGG 4 cut(s) 605, 675, 927, 1093
BssMI GATC 5 cut(s) 284, 334, 403, 835, 1063
BssNAI GTATAC 1 cut(s) 393
BssT1I CCWWGG 2 cut(s) 605, 927
Bst1107I GTATAC 1 cut(s) 393
Bst4CI ACNGT 4 cut(s) 143, 856, 910, 960
Bst6I CTCTTC 1 cut(s) 785
BstAFI CTTAAG 1 cut(s) 433
BstDEI CTNAG 3 cut(s) 411, 617, 1028
BstDSI CCRYGG 1 cut(s) 605
BstF5I GGATG 7 cut(s) 505, 744, 835, 937, 986, 1047, 1103
BstKTI GATC 5 cut(s) 287, 337, 406, 838, 1066
BstMAI GTCTC 2 cut(s) 595, 839
BstMBI GATC 5 cut(s) 284, 334, 403, 835, 1063
BstMWI GCNNNNNNNGC 3 cut(s) 53, 329, 539
BstNSI RCATGY 2 cut(s) 139, 320
BstSCI CCNGG 2 cut(s) 653, 665
BstV1I GCAGC 3 cut(s) 40, 332, 963
BstV2I GAAGAC 2 cut(s) 873, 908
BstX2I RGATCY 1 cut(s) 284
BstYI RGATCY 1 cut(s) 284
BstZ17I GTATAC 1 cut(s) 393
BsuRI GGCC 1 cut(s) 213
BtgI CCRYGG 1 cut(s) 605
BtsCI GGATG 7 cut(s) 505, 744, 835, 937, 986, 1047, 1103
BtsIMutI CAGTG 1 cut(s) 965
BveI ACCTGC 1 cut(s) 574
CciI TCATGA 1 cut(s) 157
Cfr10I RCCGGY 1 cut(s) 1116
Cfr13I GGNCC 2 cut(s) 116, 672
Csp6I GTAC 2 cut(s) 888, 1089
CspCI CAANNNNNGTGG 2 cut(s) 650, 685
CviAII CATG 7 cut(s) 80, 136, 158, 227, 317, 524, 606
CviQI GTAC 2 cut(s) 888, 1089
DdeI CTNAG 3 cut(s) 411, 617, 1028
DpnI GATC 5 cut(s) 286, 336, 405, 837, 1065
DpnII GATC 5 cut(s) 284, 334, 403, 835, 1063
DriI GACNNNNNGTC 1 cut(s) 912
Eam1104I CTCTTC 1 cut(s) 785
Eam1105I GACNNNNNGTC 1 cut(s) 912
EarI CTCTTC 1 cut(s) 785
Eco130I CCWWGG 2 cut(s) 605, 927
Eco31I GGTCTC 1 cut(s) 595
Eco32I GATATC 1 cut(s) 505
Eco47I GGWCC 2 cut(s) 116, 672
Eco57I CTGAAG 1 cut(s) 345
Eco88I CYCGRG 1 cut(s) 819
EcoRI GAATTC 1 cut(s) 75
EcoRV GATATC 1 cut(s) 505
EcoT14I CCWWGG 2 cut(s) 605, 927
ErhI CCWWGG 2 cut(s) 605, 927
FaeI CATG 7 cut(s) 83, 139, 161, 230, 320, 527, 609
FaqI GGGAC 2 cut(s) 335, 990
FatI CATG 7 cut(s) 79, 135, 157, 226, 316, 523, 605
FblI GTMKAC 2 cut(s) 193, 392
Fnu4HI GCNGC 3 cut(s) 54, 321, 952
FokI GGATG 7 cut(s) 512, 731, 842, 944, 973, 1054, 1110
Fsp4HI GCNGC 3 cut(s) 54, 321, 952
FspBI CTAG 7 cut(s) 189, 587, 693, 713, 801, 947, 1113
GluI GCNGC 3 cut(s) 54, 321, 952
HaeIII GGCC 1 cut(s) 213
HapII CCGG 3 cut(s) 655, 666, 1117
Hin1II CATG 7 cut(s) 83, 139, 161, 230, 320, 527, 609
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 3 cut(s) 448, 469, 512
HpaII CCGG 3 cut(s) 655, 666, 1117
HphI GGTGA 1 cut(s) 95
Hpy166II GTNNAC 3 cut(s) 194, 393, 672
Hpy188I TCNGA 3 cut(s) 547, 1078, 1097
Hpy188III TCNNGA 5 cut(s) 158, 296, 443, 592, 821
Hpy8I GTNNAC 3 cut(s) 194, 393, 672
HpyAV CCTTC 2 cut(s) 490, 967
HpyCH4III ACNGT 4 cut(s) 143, 856, 910, 960
HpyCH4IV ACGT 1 cut(s) 814
HpyCH4V TGCA 8 cut(s) 139, 320, 563, 569, 661, 767, 851, 894
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 329, 539
HpyF3I CTNAG 3 cut(s) 411, 617, 1028
HpySE526I ACGT 1 cut(s) 814
Hsp92II CATG 7 cut(s) 83, 139, 161, 230, 320, 527, 609
KpnI GGTACC 1 cut(s) 1092
Kzo9I GATC 5 cut(s) 284, 334, 403, 835, 1063
LmnI GCTCC 2 cut(s) 421, 929
Lsp1109I GCAGC 3 cut(s) 40, 332, 963
LweI GCATC 2 cut(s) 265, 289
MaeI CTAG 7 cut(s) 189, 587, 693, 713, 801, 947, 1113
MaeII ACGT 1 cut(s) 814
MaeIII GTNAC 1 cut(s) 29
MalI GATC 5 cut(s) 286, 336, 405, 837, 1065
MboI GATC 5 cut(s) 284, 334, 403, 835, 1063
MboII GAAGA 8 cut(s) 101, 173, 374, 639, 799, 802, 878, 908
MflI RGATCY 1 cut(s) 284
MhlI GDGCHC 1 cut(s) 820
MluCI AATT 6 cut(s) 61, 75, 121, 1045, 1059, 1079
MroXI GAANNNNTTC 1 cut(s) 369
MseI TTAA 3 cut(s) 281, 434, 1104
MslI CAYNNNNRTG 3 cut(s) 162, 619, 875
MspA1I CMGCKG 1 cut(s) 323
MspCI CTTAAG 1 cut(s) 433
MspI CCGG 3 cut(s) 655, 666, 1117
MspR9I CCNGG 2 cut(s) 655, 667
MwoI GCNNNNNNNGC 3 cut(s) 53, 329, 539
NciI CCSGG 2 cut(s) 655, 667
NcoI CCATGG 1 cut(s) 605
NdeII GATC 5 cut(s) 284, 334, 403, 835, 1063
NlaIII CATG 7 cut(s) 83, 139, 161, 230, 320, 527, 609
NlaIV GGNNCC 4 cut(s) 417, 647, 718, 1090
NmeAIII GCCGAG 1 cut(s) 656
NspI RCATGY 2 cut(s) 139, 320
OliI CACNNNNGTG 1 cut(s) 619
PagI TCATGA 1 cut(s) 157
PaqCI CACCTGC 1 cut(s) 574
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 3 cut(s) 448, 469, 512
PkrI GCNGC 3 cut(s) 55, 322, 953
PspN4I GGNNCC 4 cut(s) 417, 647, 718, 1090
PspPI GGNCC 2 cut(s) 116, 672
PsuI RGATCY 1 cut(s) 284
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 2 cut(s) 889, 1090
RsaNI GTAC 2 cut(s) 888, 1089
RseI CAYNNNNRTG 3 cut(s) 162, 619, 875
SaqAI TTAA 3 cut(s) 281, 434, 1104
SatI GCNGC 3 cut(s) 54, 321, 952
Sau3AI GATC 5 cut(s) 284, 334, 403, 835, 1063
Sau96I GGNCC 2 cut(s) 116, 672
ScrFI CCNGG 2 cut(s) 655, 667
SduI GDGCHC 1 cut(s) 820
SfaNI GCATC 2 cut(s) 265, 289
SinI GGWCC 2 cut(s) 116, 672
SmiMI CAYNNNNRTG 3 cut(s) 162, 619, 875
SmlI CTYRAG 5 cut(s) 126, 177, 294, 433, 443
SmoI CTYRAG 5 cut(s) 126, 177, 294, 433, 443
Sse9I AATT 6 cut(s) 61, 75, 121, 1045, 1059, 1079
SsiI CCGC 1 cut(s) 1086
SspI AATATT 1 cut(s) 520
SspMI CTAG 7 cut(s) 189, 587, 693, 713, 801, 947, 1113
StyD4I CCNGG 2 cut(s) 653, 665
StyI CCWWGG 2 cut(s) 605, 927
TaaI ACNGT 4 cut(s) 143, 856, 910, 960
TaiI ACGT 1 cut(s) 817
TaqI TCGA 2 cut(s) 73, 112
TasI AATT 6 cut(s) 61, 75, 121, 1045, 1059, 1079
TfiI GAWTC 3 cut(s) 448, 469, 512
Tru1I TTAA 3 cut(s) 281, 434, 1104
Tru9I TTAA 3 cut(s) 281, 434, 1104
TscAI CASTG 1 cut(s) 965
TseI GCWGC 3 cut(s) 53, 320, 951
TspDTI ATGAA 8 cut(s) 36, 68, 174, 237, 254, 512, 567, 1058
TspRI CASTG 1 cut(s) 965
Vha464I CTTAAG 1 cut(s) 433
VpaK11BI GGWCC 2 cut(s) 116, 672
XapI RAATTY 2 cut(s) 75, 121
XceI RCATGY 2 cut(s) 139, 320
XcmI CCANNNNNNNNNTGG 1 cut(s) 733
XmiI GTMKAC 2 cut(s) 193, 392
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 7 cut(s) 189, 587, 693, 713, 801, 947, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.