WD40 repeats
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 221 |
| AfaI | GTAC | 1 cut(s) | 178 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 173, 221, 303 |
| Alw26I | GTCTC | 1 cut(s) | 114 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 118 |
| AspS9I | GGNCC | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 1 cut(s) | 60 |
| AvaII | GGWCC | 1 cut(s) | 164 |
| BanII | GRGCYC | 1 cut(s) | 198 |
| BauI | CACGAG | 1 cut(s) | 237 |
| BccI | CCATC | 2 cut(s) | 297, 305 |
| BcoDI | GTCTC | 1 cut(s) | 114 |
| BfaI | CTAG | 2 cut(s) | 275, 348 |
| Bme18I | GGWCC | 1 cut(s) | 164 |
| BmgT120I | GGNCC | 1 cut(s) | 164 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BmsI | GCATC | 2 cut(s) | 38, 74 |
| BpmI | CTGGAG | 1 cut(s) | 164 |
| BpuEI | CTTGAG | 2 cut(s) | 182, 343 |
| BsaJI | CCNNGG | 2 cut(s) | 172, 301 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 194, 224 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 173, 221, 303 |
| BseDI | CCNNGG | 2 cut(s) | 172, 301 |
| BseGI | GGATG | 2 cut(s) | 289, 297 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 173, 221, 303 |
| BseMII | CTCAG | 2 cut(s) | 125, 329 |
| BslFI | GGGAC | 1 cut(s) | 63 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 173, 221, 303 |
| BsmAI | GTCTC | 1 cut(s) | 114 |
| BsmFI | GGGAC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 31 |
| Bsp1286I | GDGCHC | 1 cut(s) | 198 |
| BspCNI | CTCAG | 2 cut(s) | 124, 328 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BssECI | CCNNGG | 2 cut(s) | 172, 301 |
| BssSI | CACGAG | 1 cut(s) | 237 |
| BssT1I | CCWWGG | 2 cut(s) | 172, 301 |
| Bst2BI | CACGAG | 1 cut(s) | 237 |
| BstDEI | CTNAG | 2 cut(s) | 111, 315 |
| BstF5I | GGATG | 2 cut(s) | 289, 297 |
| BstMAI | GTCTC | 1 cut(s) | 114 |
| BtsCI | GGATG | 2 cut(s) | 289, 297 |
| BtsIMutI | CAGTG | 1 cut(s) | 372 |
| CaiI | CAGNNNCTG | 1 cut(s) | 118 |
| Cfr13I | GGNCC | 1 cut(s) | 164 |
| Csp6I | GTAC | 1 cut(s) | 177 |
| CviJI | RGCY | 2 cut(s) | 185, 196 |
| CviKI_1 | RGCY | 2 cut(s) | 185, 196 |
| CviQI | GTAC | 1 cut(s) | 177 |
| DdeI | CTNAG | 2 cut(s) | 111, 315 |
| Eco130I | CCWWGG | 2 cut(s) | 172, 301 |
| Eco24I | GRGCYC | 1 cut(s) | 198 |
| Eco47I | GGWCC | 1 cut(s) | 164 |
| EcoT14I | CCWWGG | 2 cut(s) | 172, 301 |
| EcoT22I | ATGCAT | 1 cut(s) | 31 |
| EcoT38I | GRGCYC | 1 cut(s) | 198 |
| ErhI | CCWWGG | 2 cut(s) | 172, 301 |
| FaiI | YATR | 7 cut(s) | 17, 38, 93, 104, 137, 382, 395 |
| FaqI | GGGAC | 1 cut(s) | 63 |
| FokI | GGATG | 2 cut(s) | 276, 284 |
| FriOI | GRGCYC | 1 cut(s) | 198 |
| FspBI | CTAG | 2 cut(s) | 275, 348 |
| GsuI | CTGGAG | 1 cut(s) | 164 |
| HinfI | GANTC | 2 cut(s) | 150, 225 |
| HphI | GGTGA | 1 cut(s) | 60 |
| Hpy166II | GTNNAC | 1 cut(s) | 224 |
| Hpy188I | TCNGA | 3 cut(s) | 130, 318, 331 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 167 |
| Hpy8I | GTNNAC | 1 cut(s) | 224 |
| HpyCH4IV | ACGT | 1 cut(s) | 270 |
| HpyCH4V | TGCA | 2 cut(s) | 29, 65 |
| HpyF3I | CTNAG | 2 cut(s) | 111, 315 |
| HpySE526I | ACGT | 1 cut(s) | 270 |
| LpnPI | CCDG | 3 cut(s) | 128, 180, 306 |
| LweI | GCATC | 2 cut(s) | 38, 74 |
| MaeI | CTAG | 2 cut(s) | 275, 348 |
| MaeII | ACGT | 1 cut(s) | 270 |
| MhlI | GDGCHC | 1 cut(s) | 198 |
| MluCI | AATT | 2 cut(s) | 8, 390 |
| MlyI | GAGTC | 1 cut(s) | 219 |
| MnlI | CCTC | 3 cut(s) | 218, 233, 355 |
| Mph1103I | ATGCAT | 1 cut(s) | 31 |
| MseI | TTAA | 1 cut(s) | 45 |
| Mva1269I | GAATGC | 1 cut(s) | 31 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| NsiI | ATGCAT | 1 cut(s) | 31 |
| PctI | GAATGC | 1 cut(s) | 31 |
| PfeI | GAWTC | 1 cut(s) | 150 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 221 |
| PleI | GAGTC | 1 cut(s) | 219 |
| PpsI | GAGTC | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PspPI | GGNCC | 1 cut(s) | 164 |
| PstNI | CAGNNNCTG | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 178 |
| RsaNI | GTAC | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 45 |
| Sau96I | GGNCC | 1 cut(s) | 164 |
| SchI | GAGTC | 1 cut(s) | 219 |
| SduI | GDGCHC | 1 cut(s) | 198 |
| SetI | ASST | 5 cut(s) | 178, 273, 325, 347, 365 |
| SfaNI | GCATC | 2 cut(s) | 38, 74 |
| SinI | GGWCC | 1 cut(s) | 164 |
| SmlI | CTYRAG | 2 cut(s) | 197, 358 |
| SmoI | CTYRAG | 2 cut(s) | 197, 358 |
| Sse9I | AATT | 2 cut(s) | 8, 390 |
| SspI | AATATT | 1 cut(s) | 373 |
| SspMI | CTAG | 2 cut(s) | 275, 348 |
| StyI | CCWWGG | 2 cut(s) | 172, 301 |
| TaiI | ACGT | 1 cut(s) | 273 |
| TaqII | GACCGA | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 8, 390 |
| TfiI | GAWTC | 1 cut(s) | 150 |
| Tru1I | TTAA | 1 cut(s) | 45 |
| Tru9I | TTAA | 1 cut(s) | 45 |
| TscAI | CASTG | 1 cut(s) | 372 |
| TspDTI | ATGAA | 1 cut(s) | 38 |
| TspRI | CASTG | 1 cut(s) | 372 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 221 |
| VpaK11BI | GGWCC | 1 cut(s) | 164 |
| XspI | CTAG | 2 cut(s) | 275, 348 |
| Zsp2I | ATGCAT | 1 cut(s) | 31 |