RLG00000033451

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000109
Physical Location & Seq
Forward (+)
27416382 .. 27418905
2524 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033451

Sequence Viewer

Length: 1233 bp
ATGGTTGATCACGTCACCACTCATTTGGCAGCAACTTTGGCAATTTCTGAAGATGGTCGGACGTCCTTTGGTCCTGCTGGTGCTGCTGTTGTGTCTACCCACCACTTTGCAGTAGGGAGACTTCTCTCCGTCATGGCCAAGCGTCGGGCTCATCCCAAGGCTTTCTTGGGGACCATGACCTCTATATGGGGGTTTGGAAATCGCCTCTCTGCACGAGCGGTCAAGGATCAGTTTGTGTTCCAGTTTTCAAATCCAGAGGATCGCTTGAGGACGGGCGCCGTGGTGCTCATTAGAGCCACCTTAGGAGAGATCATGCATTTTGACAAGGCTGGCATTCCTAAGGGTACGGCGGCGCGGAACACTAGCGGTCGGGTTGTGTTGGCCCTCCCGGAGGCTCTGCAGGTCTCTGTTGGAGTCAACCCTAACCCTAATTTGGTCGAGTCTGCATCTCCGAGTCTTGCAGAGGTTTTGGCTCAGTCCACAACACCAAAACTCTTCACTTCCTTGGCAAGGTCAACCTCAGGTTCACTCCAGGGTTTCTCGACTTCAGCTATAACGGCCCAACTGGCCAAAATCCCATCTCCGGTCCAGTCGGTTAGTGACCCTATGCAAGCTGCTGTAGATGTCCCATCTCTTAGTGGGAAGAAGAGGACGGCCTCTGCGACCGTTATGCAATATACTAAGCGTAAGAAGACAGTTGAGGAGGTATCTCAGGTGGAGGCTGTTGATCTTGGGTTTGAACCAGAATTGGCATTGAAGAGTAAGAATGGGGTTATTCTAGTATCCCTAGCGAAGAAGGTCAAGCTGGGACATCCACCTGGGCGTAAGAACAATCCAAAACCTATAGGTTTGAAACCTAAGAAGCTGATCTCTGAGGATCCAAAACCTCAGAGGAAGAGAAGTTTTACGGCGGTGGAACACATTTCATCCTCTGGTGAAGGCAGCTTGGGCCTGGCTGCAATAACATCAACCCCTGCTGTGCTAGTAGGAAGAATTGACGGTGGTAATACTCTAGCAGCAGAATCAAGGGATTGGCTAGGCTGGGTTCAACTTGCTGTGTTCTTCGTTGGAAAGCAGACCTGCAATCCGAGGTTCTGTTTTGATTTAGTTGATCACAAGTTGGCTTCTGGAAACTTGGTTGCCATGTTGCATGCCTACTGTGATGTTGTGTTTGAGAAGAGTAAAATTGGATTGATAGTCACAAGTCACAACAAGTCGAAAGCTATGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

411

Amino Acids

43.57

Weight (kDa)

10.0

Isoelectric Point (pI)

31.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 65
Acc36I ACCTGC 2 cut(s) 391, 1088
AccB1I GGYRCC 1 cut(s) 275
AccBSI CCGCTC 1 cut(s) 218
AccI GTMKAC 1 cut(s) 95
AccII CGCG 1 cut(s) 355
AciI CCGC 5 cut(s) 218, 350, 355, 366, 911
AclWI GGATC 4 cut(s) 234, 267, 872, 885
AcoI YGGCCR 2 cut(s) 135, 567
AcuI CTGAAG 2 cut(s) 69, 531
AcyI GRCGYC 2 cut(s) 62, 276
AfaI GTAC 1 cut(s) 346
AfiI CCNNNNNNNGG 6 cut(s) 144, 186, 391, 433, 510, 583
AgsI TTSAA 5 cut(s) 249, 740, 757, 853, 1049
AjiI CACGTC 1 cut(s) 13
AjnI CCWGG 3 cut(s) 531, 817, 951
AluBI AGCT 6 cut(s) 551, 614, 805, 865, 945, 1223
AluI AGCT 6 cut(s) 551, 614, 805, 865, 945, 1223
Alw21I GWGCWC 1 cut(s) 288
Alw26I GTCTC 2 cut(s) 112, 409
AlwI GGATC 4 cut(s) 234, 267, 872, 885
AoxI GGCC 6 cut(s) 135, 381, 558, 567, 654, 949
ApeKI GCWGC 6 cut(s) 29, 83, 614, 942, 956, 1016
ArsI GACNNNNNNTTYG 1 cut(s) 1211
AspLEI GCGC 2 cut(s) 278, 355
AspS9I GGNCC 6 cut(s) 71, 171, 382, 559, 586, 949
AsuC2I CCSGG 1 cut(s) 389
AsuHPI GGTGA 2 cut(s) 7, 947
AvaII GGWCC 3 cut(s) 71, 171, 586
AxyI CCTNAGG 3 cut(s) 301, 339, 520
BalI TGGCCA 2 cut(s) 137, 569
BamHI GGATCC 1 cut(s) 877
BanI GGYRCC 1 cut(s) 275
BanII GRGCYC 1 cut(s) 151
BarI GAAGNNNNNNTAC 2 cut(s) 105, 137
BauI CACGAG 1 cut(s) 213
BbsI GAAGAC 1 cut(s) 698
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 6 cut(s) 41, 70, 601, 943, 954, 1028
BccI CCATC 3 cut(s) 47, 586, 637
BceAI ACGGC 5 cut(s) 263, 363, 573, 669, 924
BcgI CGANNNNNNTGC 2 cut(s) 652, 686
BciT130I CCWGG 3 cut(s) 533, 819, 953
BciVI GTATCC 1 cut(s) 793
BclI TGATCA 2 cut(s) 7, 1111
BcnI CCSGG 1 cut(s) 389
BcoDI GTCTC 2 cut(s) 112, 409
BfaI CTAG 6 cut(s) 363, 779, 788, 983, 1013, 1037
BfmI CTRYAG 3 cut(s) 398, 618, 843
BfoI RGCGCY 1 cut(s) 279
BfuAI ACCTGC 2 cut(s) 391, 1088
BfuI GTATCC 1 cut(s) 793
BglI GCCNNNNNGGC 1 cut(s) 566
BisI GCNGC 7 cut(s) 30, 84, 351, 615, 943, 957, 1017
BlsI GCNGC 7 cut(s) 31, 85, 352, 616, 944, 958, 1018
Bme1390I CCNGG 4 cut(s) 389, 533, 819, 953
Bme18I GGWCC 3 cut(s) 71, 171, 586
BmgBI CACGTC 1 cut(s) 13
BmgT120I GGNCC 6 cut(s) 71, 171, 382, 559, 586, 949
BmiI GGNNCC 3 cut(s) 172, 277, 879
BmrFI CCNGG 4 cut(s) 389, 533, 819, 953
BmsI GCATC 1 cut(s) 455
BpiI GAAGAC 1 cut(s) 698
BpmI CTGGAG 1 cut(s) 515
BpuEI CTTGAG 1 cut(s) 286
BpuMI CCSGG 1 cut(s) 389
BsaHI GRCGYC 2 cut(s) 62, 276
BsaI GGTCTC 1 cut(s) 409
BsaJI CCNNGG 6 cut(s) 156, 279, 504, 532, 818, 1088
BsaWI WCCGGW 1 cut(s) 583
Bsc4I CCNNNNNNNGG 6 cut(s) 144, 186, 391, 433, 510, 583
Bse1I ACTGG 3 cut(s) 241, 570, 589
Bse21I CCTNAGG 3 cut(s) 301, 339, 520
BseBI CCWGG 3 cut(s) 533, 819, 953
BseDI CCNNGG 6 cut(s) 156, 279, 504, 532, 818, 1088
BseGI GGATG 3 cut(s) 151, 811, 926
BseLI CCNNNNNNNGG 6 cut(s) 144, 186, 391, 433, 510, 583
BseMII CTCAG 5 cut(s) 488, 534, 725, 864, 902
BseNI ACTGG 3 cut(s) 241, 570, 589
BseRI GAGGAG 1 cut(s) 716
BseXI GCAGC 6 cut(s) 41, 70, 601, 943, 954, 1028
BseYI CCCAGC 2 cut(s) 805, 1041
BsgI GTGCAG 1 cut(s) 195
Bsh1236I CGCG 1 cut(s) 355
Bsh1285I CGRYCG 2 cut(s) 370, 666
BshFI GGCC 6 cut(s) 137, 383, 560, 569, 656, 951
BshNI GGYRCC 1 cut(s) 275
BsiEI CGRYCG 2 cut(s) 370, 666
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 2 cut(s) 389, 584
BslFI GGGAC 3 cut(s) 184, 611, 822
BslI CCNNNNNNNGG 6 cut(s) 144, 186, 391, 433, 510, 583
BsmAI GTCTC 2 cut(s) 112, 409
BsmFI GGGAC 3 cut(s) 184, 611, 822
BsmI GAATGC 1 cut(s) 333
BsnI GGCC 6 cut(s) 137, 383, 560, 569, 656, 951
Bso31I GGTCTC 1 cut(s) 409
Bsp1286I GDGCHC 2 cut(s) 151, 288
Bsp143I GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
BspACI CCGC 5 cut(s) 218, 350, 355, 366, 911
BspANI GGCC 6 cut(s) 137, 383, 560, 569, 656, 951
BspCNI CTCAG 5 cut(s) 487, 533, 724, 865, 901
BspFNI CGCG 1 cut(s) 355
BspLI GGNNCC 3 cut(s) 172, 277, 879
BspMAI CTGCAG 1 cut(s) 402
BspMI ACCTGC 2 cut(s) 391, 1088
BspPI GGATC 4 cut(s) 234, 267, 872, 885
BspT107I GGYRCC 1 cut(s) 275
BspTNI GGTCTC 1 cut(s) 409
BsrBI CCGCTC 1 cut(s) 218
BsrI ACTGG 3 cut(s) 241, 570, 589
BssECI CCNNGG 6 cut(s) 156, 279, 504, 532, 818, 1088
BssMI GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
BssNI GRCGYC 2 cut(s) 62, 276
BssSI CACGAG 1 cut(s) 213
BssT1I CCWWGG 2 cut(s) 156, 504
Bst2BI CACGAG 1 cut(s) 213
Bst2UI CCWGG 3 cut(s) 533, 819, 953
Bst4CI ACNGT 4 cut(s) 667, 697, 1001, 1160
Bst6I CTCTTC 5 cut(s) 500, 641, 752, 890, 1172
BstACI GRCGYC 2 cut(s) 62, 276
BstC8I GCNNGC 3 cut(s) 331, 612, 1152
BstDSI CCRYGG 1 cut(s) 279
BstENI CCTNNNNNAGG 2 cut(s) 389, 508
BstF5I GGATG 3 cut(s) 151, 811, 926
BstFNI CGCG 1 cut(s) 355
BstH2I RGCGCY 1 cut(s) 279
BstHHI GCGC 2 cut(s) 278, 355
BstKTI GATC 8 cut(s) 10, 229, 262, 312, 730, 870, 880, 1114
BstMAI GTCTC 2 cut(s) 112, 409
BstMBI GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
BstMCI CGRYCG 2 cut(s) 370, 666
BstMWI GCNNNNNNNGC 5 cut(s) 38, 83, 557, 566, 948
BstNI CCWGG 3 cut(s) 533, 819, 953
BstNSI RCATGY 1 cut(s) 1154
BstSCI CCNGG 4 cut(s) 387, 531, 817, 951
BstSFI CTRYAG 3 cut(s) 398, 618, 843
BstUI CGCG 1 cut(s) 355
BstV1I GCAGC 6 cut(s) 41, 70, 601, 943, 954, 1028
BstV2I GAAGAC 1 cut(s) 698
BstX2I RGATCY 1 cut(s) 877
BstXI CCANNNNNNTGG 1 cut(s) 25
BstYI RGATCY 1 cut(s) 877
Bsu36I CCTNAGG 3 cut(s) 301, 339, 520
BsuI GTATCC 1 cut(s) 793
BsuRI GGCC 6 cut(s) 137, 383, 560, 569, 656, 951
BtgI CCRYGG 1 cut(s) 279
BtrI CACGTC 1 cut(s) 13
BtsCI GGATG 3 cut(s) 151, 811, 926
BveI ACCTGC 2 cut(s) 391, 1088
Cac8I GCNNGC 3 cut(s) 331, 612, 1152
CfoI GCGC 2 cut(s) 278, 355
Cfr13I GGNCC 6 cut(s) 71, 171, 382, 559, 586, 949
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 345
CviAII CATG 5 cut(s) 133, 175, 313, 1144, 1151
CviQI GTAC 1 cut(s) 345
DinI GGCGCC 1 cut(s) 277
DpnI GATC 8 cut(s) 9, 228, 261, 311, 729, 869, 879, 1113
DpnII GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
EaeI YGGCCR 2 cut(s) 135, 567
Eam1104I CTCTTC 5 cut(s) 500, 641, 752, 890, 1172
EarI CTCTTC 5 cut(s) 500, 641, 752, 890, 1172
Eco130I CCWWGG 2 cut(s) 156, 504
Eco24I GRGCYC 1 cut(s) 151
Eco31I GGTCTC 1 cut(s) 409
Eco47I GGWCC 3 cut(s) 71, 171, 586
Eco57I CTGAAG 2 cut(s) 69, 531
Eco81I CCTNAGG 3 cut(s) 301, 339, 520
EcoNI CCTNNNNNAGG 2 cut(s) 389, 508
EcoRII CCWGG 3 cut(s) 531, 817, 951
EcoT14I CCWWGG 2 cut(s) 156, 504
EcoT22I ATGCAT 1 cut(s) 318
EcoT38I GRGCYC 1 cut(s) 151
EgeI GGCGCC 1 cut(s) 277
EheI GGCGCC 1 cut(s) 277
ErhI CCWWGG 2 cut(s) 156, 504
FaeI CATG 5 cut(s) 136, 178, 316, 1147, 1154
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 3 cut(s) 184, 611, 822
FatI CATG 5 cut(s) 132, 174, 312, 1143, 1150
FbaI TGATCA 2 cut(s) 7, 1111
FblI GTMKAC 1 cut(s) 95
Fnu4HI GCNGC 7 cut(s) 30, 84, 351, 615, 943, 957, 1017
FokI GGATG 3 cut(s) 138, 798, 913
FriOI GRGCYC 1 cut(s) 151
Fsp4HI GCNGC 7 cut(s) 30, 84, 351, 615, 943, 957, 1017
FspBI CTAG 6 cut(s) 363, 779, 788, 983, 1013, 1037
GlaI GCGC 2 cut(s) 277, 354
GluI GCNGC 7 cut(s) 30, 84, 351, 615, 943, 957, 1017
GsaI CCCAGC 2 cut(s) 809, 1045
GsuI CTGGAG 1 cut(s) 515
HaeII RGCGCY 1 cut(s) 279
HaeIII GGCC 6 cut(s) 137, 383, 560, 569, 656, 951
HapII CCGG 2 cut(s) 389, 584
HgaI GACGC 1 cut(s) 131
HhaI GCGC 2 cut(s) 278, 355
Hin1I GRCGYC 2 cut(s) 62, 276
Hin1II CATG 5 cut(s) 136, 178, 316, 1147, 1154
Hin6I GCGC 2 cut(s) 276, 353
HinP1I GCGC 2 cut(s) 276, 353
HincII GTYRAC 2 cut(s) 418, 516
HindII GTYRAC 2 cut(s) 418, 516
HinfI GANTC 4 cut(s) 414, 440, 454, 1022
HpaII CCGG 2 cut(s) 389, 584
HphI GGTGA 2 cut(s) 7, 947
Hpy166II GTNNAC 5 cut(s) 96, 418, 480, 516, 527
Hpy188I TCNGA 6 cut(s) 49, 60, 453, 874, 891, 1089
Hpy188III TCNNGA 3 cut(s) 254, 541, 1128
Hpy8I GTNNAC 5 cut(s) 96, 418, 480, 516, 527
Hpy99I CGWCG 1 cut(s) 147
HpyAV CCTTC 2 cut(s) 790, 932
HpyCH4III ACNGT 4 cut(s) 667, 697, 1001, 1160
HpyCH4IV ACGT 2 cut(s) 12, 62
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 83, 557, 566, 948
HpySE526I ACGT 2 cut(s) 12, 62
Hsp92I GRCGYC 2 cut(s) 62, 276
Hsp92II CATG 5 cut(s) 136, 178, 316, 1147, 1154
HspAI GCGC 2 cut(s) 276, 353
KasI GGCGCC 1 cut(s) 275
Ksp22I TGATCA 2 cut(s) 7, 1111
Kzo9I GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
Lsp1109I GCAGC 6 cut(s) 41, 70, 601, 943, 954, 1028
LweI GCATC 1 cut(s) 455
MaeI CTAG 6 cut(s) 363, 779, 788, 983, 1013, 1037
MaeII ACGT 2 cut(s) 12, 62
MaeIII GTNAC 4 cut(s) 13, 599, 1198, 1205
MalI GATC 8 cut(s) 9, 228, 261, 311, 729, 869, 879, 1113
MbiI CCGCTC 1 cut(s) 218
MboI GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 2 cut(s) 151, 288
MlsI TGGCCA 2 cut(s) 137, 569
MluCI AATT 5 cut(s) 42, 430, 746, 993, 1185
MluNI TGGCCA 2 cut(s) 137, 569
Mly113I GGCGCC 1 cut(s) 276
MlyI GAGTC 3 cut(s) 423, 449, 463
MmeI TCCRAC 3 cut(s) 38, 391, 1048
Mox20I TGGCCA 2 cut(s) 137, 569
Mph1103I ATGCAT 1 cut(s) 318
MscI TGGCCA 2 cut(s) 137, 569
Msp20I TGGCCA 2 cut(s) 137, 569
MspI CCGG 2 cut(s) 389, 584
MspR9I CCNGG 4 cut(s) 389, 533, 819, 953
Mva1269I GAATGC 1 cut(s) 333
MvaI CCWGG 3 cut(s) 533, 819, 953
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 5 cut(s) 38, 83, 557, 566, 948
NarI GGCGCC 1 cut(s) 276
NciI CCSGG 1 cut(s) 389
NdeII GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
NlaIII CATG 5 cut(s) 136, 178, 316, 1147, 1154
NlaIV GGNNCC 3 cut(s) 172, 277, 879
NmuCI GTSAC 4 cut(s) 13, 599, 1198, 1205
NsiI ATGCAT 1 cut(s) 318
NspI RCATGY 1 cut(s) 1154
PaeI GCATGC 1 cut(s) 1154
PcsI WCGNNNNNNNCGW 1 cut(s) 659
PctI GAATGC 1 cut(s) 333
PfeI GAWTC 1 cut(s) 1022
PfoI TCCNGGA 1 cut(s) 387
PkrI GCNGC 7 cut(s) 31, 85, 352, 616, 944, 958, 1018
PleI GAGTC 3 cut(s) 422, 448, 462
PluTI GGCGCC 1 cut(s) 279
PpsI GAGTC 3 cut(s) 422, 448, 462
Psp6I CCWGG 3 cut(s) 531, 817, 951
PspFI CCCAGC 2 cut(s) 805, 1041
PspGI CCWGG 3 cut(s) 531, 817, 951
PspN4I GGNNCC 3 cut(s) 172, 277, 879
PspPI GGNCC 6 cut(s) 71, 171, 382, 559, 586, 949
PstI CTGCAG 1 cut(s) 402
PsuI RGATCY 1 cut(s) 877
RsaI GTAC 1 cut(s) 346
RsaNI GTAC 1 cut(s) 345
SatI GCNGC 7 cut(s) 30, 84, 351, 615, 943, 957, 1017
Sau3AI GATC 8 cut(s) 7, 226, 259, 309, 727, 867, 877, 1111
Sau96I GGNCC 6 cut(s) 71, 171, 382, 559, 586, 949
SchI GAGTC 3 cut(s) 423, 449, 463
ScrFI CCNGG 4 cut(s) 389, 533, 819, 953
SduI GDGCHC 2 cut(s) 151, 288
SfaNI GCATC 1 cut(s) 455
SfcI CTRYAG 3 cut(s) 398, 618, 843
SfiI GGCCNNNNNGGCC 1 cut(s) 566
SfoI GGCGCC 1 cut(s) 277
SinI GGWCC 3 cut(s) 71, 171, 586
SmlI CTYRAG 1 cut(s) 265
SmoI CTYRAG 1 cut(s) 265
SphI GCATGC 1 cut(s) 1154
Sse9I AATT 5 cut(s) 42, 430, 746, 993, 1185
SsiI CCGC 5 cut(s) 218, 350, 355, 366, 911
SspDI GGCGCC 1 cut(s) 275
SspMI CTAG 6 cut(s) 363, 779, 788, 983, 1013, 1037
StyD4I CCNGG 4 cut(s) 387, 531, 817, 951
StyI CCWWGG 2 cut(s) 156, 504
TaaI ACNGT 4 cut(s) 667, 697, 1001, 1160
TaiI ACGT 2 cut(s) 15, 65
TaqI TCGA 3 cut(s) 438, 542, 1217
TasI AATT 5 cut(s) 42, 430, 746, 993, 1185
TauI GCSGC 1 cut(s) 353
TfiI GAWTC 1 cut(s) 1022
TseFI GTSAC 4 cut(s) 13, 599, 1198, 1205
TseI GCWGC 6 cut(s) 29, 83, 614, 942, 956, 1016
Tsp45I GTSAC 4 cut(s) 13, 599, 1198, 1205
TspDTI ATGAA 1 cut(s) 915
TspGWI ACGGA 1 cut(s) 118
VpaK11BI GGWCC 3 cut(s) 71, 171, 586
XagI CCTNNNNNAGG 2 cut(s) 389, 508
XceI RCATGY 1 cut(s) 1154
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XmiI GTMKAC 1 cut(s) 95
XspI CTAG 6 cut(s) 363, 779, 788, 983, 1013, 1037
ZraI GACGTC 1 cut(s) 63
Zsp2I ATGCAT 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.