Rmu_sc0007111.1_g000002

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007111.1
OG0000109
Physical Location & Seq
Reverse (-)
6530 .. 8031
1502 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007111.1_g000002.1.cds

Sequence Viewer

Length: 1233 bp
atgtccctcaaattgacatggcttcttcgcatctctttctctcagcatcctcctcttgatcacattaccgctcatctggcagcatctttggtgatcttcgaagacggtcggaccttctttggtccggctggtgctgctgctgtctcttcacatcattttacagtggggagacttatctctgtcaccgccaagcgtcgggctgatcccaaggctttcttggggaccatgacctccttatgggggtttggaaatcatctctctgcacgcgcagtcaaggatcggtttgtttttcaattttcaaacccagaggaatatctgaggatgatcgagggagggccatggttttttggtaaatgggcgctggctatggctgagttcgatggtttgaaagatccggcgcaagtgtccatctcttctcttccagtgtgggtagagattatggttctaccaccggccctagttactgagggcgctgtggcgctcattggagctaccttaggggagatcgtgcatctggacaaggctggtattcgtaagggcacggcggcacgagttcgtatccgtcatactctttcatctctagtgaaacaagttttccctccatccacttttgatttcacctctggggcatctgcgacgcgatctggttgtgctggccctccagaggcgttgcaggtctctgtcggcgccaaccctaaccctagcttggttgggtctgcttctccgagccttgcggaggttttggctcagtccacaacaccaaatctctttacttccgtggctaagtcgacctcaggttcactccagggtttctcggcgtcggctatagtggcccaattggccaaaattccatctccggttcagggggctagtgagcccatgcaagctactgaagttgtcccatctctcagtgggaaaaagagaacggcctctgcggccctcatgcaatatactaaacgtaagaagacaggtacagaggtacctcagatggaggttgttgatctagggtttgaacctgaattggccctaaagagtaagaatggagttctcttagtttcctcggcaaagaaggctaagttgggacgtcctcctgggcgcaagaataatccaaaacccgcaagcaactcgggtctggctgcagtaataccatccctcactggtggggaggttcacatgtcttatggtaaaggttctgagcctgaggtatgcactcccatgggtgccttcgagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

410

Amino Acids

43.15

Weight (kDa)

9.72

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1087
Acc36I ACCTGC 1 cut(s) 664
Acc65I GGTACC 1 cut(s) 979
AccB1I GGYRCC 3 cut(s) 686, 979, 1220
AccBSI CCGCTC 1 cut(s) 71
AccI GTMKAC 1 cut(s) 788
AccII CGCG 2 cut(s) 267, 640
AciI CCGC 6 cut(s) 69, 186, 545, 734, 935, 1116
AclWI GGATC 3 cut(s) 197, 285, 386
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 1 cut(s) 846
AcuI CTGAAG 1 cut(s) 912
AcyI GRCGYC 3 cut(s) 687, 818, 1084
AfaI GTAC 2 cut(s) 973, 981
AfiI CCNNNNNNNGG 7 cut(s) 195, 237, 240, 664, 706, 736, 863
AflIII ACRYGT 1 cut(s) 1173
AgsI TTSAA 4 cut(s) 293, 300, 388, 1013
AjnI CCWGG 2 cut(s) 804, 1090
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AluBI AGCT 3 cut(s) 491, 705, 887
AluI AGCT 3 cut(s) 491, 705, 887
Alw26I GTCTC 3 cut(s) 148, 163, 682
AlwI GGATC 3 cut(s) 197, 285, 386
Ama87I CYCGRG 1 cut(s) 1126
AoxI GGCC 8 cut(s) 335, 453, 655, 831, 840, 927, 936, 1023
ApeKI GCWGC 4 cut(s) 80, 134, 137, 1136
ApoI RAATTY 1 cut(s) 846
Asp718I GGTACC 1 cut(s) 979
AspLEI GCGC 7 cut(s) 269, 361, 400, 473, 481, 689, 1098
AspS9I GGNCC 9 cut(s) 111, 122, 222, 335, 454, 656, 832, 937, 1024
AsuHPI GGTGA 3 cut(s) 103, 175, 610
AsuII TTCGAA 1 cut(s) 99
AvaI CYCGRG 1 cut(s) 1126
AvaII GGWCC 3 cut(s) 111, 122, 222
AxyI CCTNAGG 3 cut(s) 496, 793, 1200
BaeGI GKGCMC 1 cut(s) 542
BaeI ACNNNNGTAYC 4 cut(s) 963, 963, 996, 996
BalI TGGCCA 1 cut(s) 842
BanI GGYRCC 3 cut(s) 686, 979, 1220
BanII GRGCYC 1 cut(s) 879
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 2 cut(s) 108, 971
BbvI GCAGC 4 cut(s) 92, 121, 124, 1123
BccI CCATC 7 cut(s) 374, 416, 610, 859, 910, 982, 1156
BceAI ACGGC 2 cut(s) 558, 942
BcgI CGANNNNNNTGC 2 cut(s) 1107, 1141
BciT130I CCWGG 2 cut(s) 806, 1092
BciVI GTATCC 1 cut(s) 569
BclI TGATCA 1 cut(s) 58
BcoDI GTCTC 3 cut(s) 148, 163, 682
BfaI CTAG 5 cut(s) 458, 581, 702, 870, 1004
BfmI CTRYAG 2 cut(s) 825, 1137
BfoI RGCGCY 4 cut(s) 362, 474, 482, 690
BfuAI ACCTGC 1 cut(s) 664
BfuI GTATCC 1 cut(s) 569
BglI GCCNNNNNGGC 2 cut(s) 839, 935
BisI GCNGC 6 cut(s) 81, 135, 138, 546, 936, 1137
BlsI GCNGC 6 cut(s) 82, 136, 139, 547, 937, 1138
Bme1390I CCNGG 2 cut(s) 806, 1092
Bme18I GGWCC 3 cut(s) 111, 122, 222
BmeT110I CYCGRG 1 cut(s) 1126
BmgT120I GGNCC 9 cut(s) 111, 122, 222, 335, 454, 656, 832, 937, 1024
BmiI GGNNCC 4 cut(s) 223, 688, 981, 1222
BmrFI CCNGG 2 cut(s) 806, 1092
BmsI GCATC 5 cut(s) 39, 55, 92, 520, 638
BpiI GAAGAC 2 cut(s) 108, 971
BpmI CTGGAG 2 cut(s) 645, 788
Bpu14I TTCGAA 1 cut(s) 99
BsaHI GRCGYC 3 cut(s) 687, 818, 1084
BsaI GGTCTC 1 cut(s) 682
BsaJI CCNNGG 7 cut(s) 207, 338, 777, 805, 1059, 1091, 1215
BsaWI WCCGGW 1 cut(s) 856
Bsc4I CCNNNNNNNGG 7 cut(s) 195, 237, 240, 664, 706, 736, 863
Bse118I RCCGGY 1 cut(s) 451
Bse1I ACTGG 2 cut(s) 422, 1162
Bse21I CCTNAGG 3 cut(s) 496, 793, 1200
BseBI CCWGG 2 cut(s) 806, 1092
BseDI CCNNGG 7 cut(s) 207, 338, 777, 805, 1059, 1091, 1215
BseGI GGATG 4 cut(s) 46, 327, 602, 1148
BseLI CCNNNNNNNGG 7 cut(s) 195, 237, 240, 664, 706, 736, 863
BseNI ACTGG 2 cut(s) 422, 1162
BseRI GAGGAG 1 cut(s) 42
BseSI GKGCMC 1 cut(s) 542
BseXI GCAGC 4 cut(s) 92, 121, 124, 1123
BsgI GTGCAG 1 cut(s) 246
Bsh1236I CGCG 2 cut(s) 267, 640
Bsh1285I CGRYCG 1 cut(s) 109
BshFI GGCC 8 cut(s) 337, 455, 657, 833, 842, 929, 938, 1025
BshNI GGYRCC 3 cut(s) 686, 979, 1220
BsiEI CGRYCG 1 cut(s) 109
BsiHKCI CYCGRG 1 cut(s) 1126
BsiSI CCGG 4 cut(s) 125, 395, 452, 857
BslFI GGGAC 3 cut(s) 235, 884, 1095
BslI CCNNNNNNNGG 7 cut(s) 195, 237, 240, 664, 706, 736, 863
BsmAI GTCTC 3 cut(s) 148, 163, 682
BsmFI GGGAC 3 cut(s) 235, 884, 1095
BsnI GGCC 8 cut(s) 337, 455, 657, 833, 842, 929, 938, 1025
Bso31I GGTCTC 1 cut(s) 682
BsoBI CYCGRG 1 cut(s) 1126
Bsp119I TTCGAA 1 cut(s) 99
Bsp1286I GDGCHC 2 cut(s) 542, 879
Bsp143I GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
Bsp19I CCATGG 2 cut(s) 338, 1215
BspACI CCGC 6 cut(s) 69, 186, 545, 734, 935, 1116
BspANI GGCC 8 cut(s) 337, 455, 657, 833, 842, 929, 938, 1025
BspFNI CGCG 2 cut(s) 267, 640
BspLI GGNNCC 4 cut(s) 223, 688, 981, 1222
BspMAI CTGCAG 1 cut(s) 1141
BspMI ACCTGC 1 cut(s) 664
BspPI GGATC 3 cut(s) 197, 285, 386
BspT104I TTCGAA 1 cut(s) 99
BspT107I GGYRCC 3 cut(s) 686, 979, 1220
BspTNI GGTCTC 1 cut(s) 682
BsrBI CCGCTC 1 cut(s) 71
BsrFI RCCGGY 1 cut(s) 451
BsrI ACTGG 2 cut(s) 422, 1162
BssAI RCCGGY 1 cut(s) 451
BssECI CCNNGG 7 cut(s) 207, 338, 777, 805, 1059, 1091, 1215
BssMI GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
BssNI GRCGYC 3 cut(s) 687, 818, 1084
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 3 cut(s) 207, 338, 1215
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 806, 1092
Bst4CI ACNGT 2 cut(s) 107, 163
Bst6I CTCTTC 3 cut(s) 151, 418, 423
BstACI GRCGYC 3 cut(s) 687, 818, 1084
BstBI TTCGAA 1 cut(s) 99
BstC8I GCNNGC 5 cut(s) 265, 363, 655, 885, 1120
BstDSI CCRYGG 3 cut(s) 338, 777, 1215
BstENI CCTNNNNNAGG 1 cut(s) 734
BstF5I GGATG 4 cut(s) 46, 327, 602, 1148
BstFNI CGCG 2 cut(s) 267, 640
BstH2I RGCGCY 4 cut(s) 362, 474, 482, 690
BstHHI GCGC 7 cut(s) 269, 361, 400, 473, 481, 689, 1098
BstKTI GATC 9 cut(s) 61, 96, 205, 280, 327, 394, 507, 644, 1003
BstMAI GTCTC 3 cut(s) 148, 163, 682
BstMBI GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
BstMCI CGRYCG 1 cut(s) 109
BstMWI GCNNNNNNNGC 6 cut(s) 77, 134, 830, 839, 935, 1070
BstNI CCWGG 2 cut(s) 806, 1092
BstNSI RCATGY 1 cut(s) 1177
BstSCI CCNGG 2 cut(s) 804, 1090
BstSFI CTRYAG 2 cut(s) 825, 1137
BstSLI GKGCMC 1 cut(s) 542
BstUI CGCG 2 cut(s) 267, 640
BstV1I GCAGC 4 cut(s) 92, 121, 124, 1123
BstV2I GAAGAC 2 cut(s) 108, 971
BstX2I RGATCY 1 cut(s) 391
BstYI RGATCY 1 cut(s) 391
Bsu36I CCTNAGG 3 cut(s) 496, 793, 1200
BsuI GTATCC 1 cut(s) 569
BsuRI GGCC 8 cut(s) 337, 455, 657, 833, 842, 929, 938, 1025
BtgI CCRYGG 3 cut(s) 338, 777, 1215
BtsCI GGATG 4 cut(s) 46, 327, 602, 1148
BtsIMutI CAGTG 4 cut(s) 168, 429, 916, 1155
BveI ACCTGC 1 cut(s) 664
Cac8I GCNNGC 5 cut(s) 265, 363, 655, 885, 1120
CfoI GCGC 7 cut(s) 269, 361, 400, 473, 481, 689, 1098
Cfr10I RCCGGY 1 cut(s) 451
Cfr13I GGNCC 9 cut(s) 111, 122, 222, 335, 454, 656, 832, 937, 1024
CseI GACGC 3 cut(s) 182, 646, 807
Csp6I GTAC 2 cut(s) 972, 980
CviAII CATG 7 cut(s) 18, 226, 339, 880, 943, 1174, 1216
CviQI GTAC 2 cut(s) 972, 980
DinI GGCGCC 1 cut(s) 688
DpnI GATC 9 cut(s) 60, 95, 204, 279, 326, 393, 506, 643, 1002
DpnII GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 3 cut(s) 151, 418, 423
EarI CTCTTC 3 cut(s) 151, 418, 423
Eco130I CCWWGG 3 cut(s) 207, 338, 1215
Eco24I GRGCYC 1 cut(s) 879
Eco31I GGTCTC 1 cut(s) 682
Eco47I GGWCC 3 cut(s) 111, 122, 222
Eco57I CTGAAG 1 cut(s) 912
Eco81I CCTNAGG 3 cut(s) 496, 793, 1200
Eco88I CYCGRG 1 cut(s) 1126
EcoNI CCTNNNNNAGG 1 cut(s) 734
EcoRII CCWGG 2 cut(s) 804, 1090
EcoT14I CCWWGG 3 cut(s) 207, 338, 1215
EcoT38I GRGCYC 1 cut(s) 879
EgeI GGCGCC 1 cut(s) 688
EheI GGCGCC 1 cut(s) 688
ErhI CCWWGG 3 cut(s) 207, 338, 1215
FaeI CATG 7 cut(s) 21, 229, 342, 883, 946, 1177, 1219
FalI AAGNNNNNCTT 2 cut(s) 200, 232
FaqI GGGAC 3 cut(s) 235, 884, 1095
FatI CATG 7 cut(s) 17, 225, 338, 879, 942, 1173, 1215
FauI CCCGC 1 cut(s) 1123
FbaI TGATCA 1 cut(s) 58
FblI GTMKAC 1 cut(s) 788
Fnu4HI GCNGC 6 cut(s) 81, 135, 138, 546, 936, 1137
FokI GGATG 4 cut(s) 33, 334, 589, 1135
FriOI GRGCYC 1 cut(s) 879
Fsp4HI GCNGC 6 cut(s) 81, 135, 138, 546, 936, 1137
FspBI CTAG 5 cut(s) 458, 581, 702, 870, 1004
GlaI GCGC 7 cut(s) 268, 360, 399, 472, 480, 688, 1097
GluI GCNGC 6 cut(s) 81, 135, 138, 546, 936, 1137
GsuI CTGGAG 2 cut(s) 645, 788
HaeII RGCGCY 4 cut(s) 362, 474, 482, 690
HaeIII GGCC 8 cut(s) 337, 455, 657, 833, 842, 929, 938, 1025
HapII CCGG 4 cut(s) 125, 395, 452, 857
HgaI GACGC 3 cut(s) 182, 646, 807
HhaI GCGC 7 cut(s) 269, 361, 400, 473, 481, 689, 1098
Hin1I GRCGYC 3 cut(s) 687, 818, 1084
Hin1II CATG 7 cut(s) 21, 229, 342, 883, 946, 1177, 1219
Hin6I GCGC 7 cut(s) 267, 359, 398, 471, 479, 687, 1096
HinP1I GCGC 7 cut(s) 267, 359, 398, 471, 479, 687, 1096
HincII GTYRAC 1 cut(s) 789
HindII GTYRAC 1 cut(s) 789
HpaII CCGG 4 cut(s) 125, 395, 452, 857
HphI GGTGA 3 cut(s) 103, 175, 610
Hpy166II GTNNAC 4 cut(s) 753, 789, 800, 1171
Hpy188I TCNGA 5 cut(s) 111, 318, 726, 987, 1195
Hpy188III TCNNGA 3 cut(s) 56, 515, 662
Hpy8I GTNNAC 4 cut(s) 753, 789, 800, 1171
Hpy99I CGWCG 3 cut(s) 198, 640, 823
HpyAV CCTTC 2 cut(s) 124, 1063
HpyCH4III ACNGT 2 cut(s) 107, 163
HpyCH4IV ACGT 2 cut(s) 958, 1084
HpyCH4V TGCA 7 cut(s) 263, 511, 673, 883, 946, 1139, 1209
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 134, 830, 839, 935, 1070
HpySE526I ACGT 2 cut(s) 958, 1084
Hsp92I GRCGYC 3 cut(s) 687, 818, 1084
Hsp92II CATG 7 cut(s) 21, 229, 342, 883, 946, 1177, 1219
HspAI GCGC 7 cut(s) 267, 359, 398, 471, 479, 687, 1096
KasI GGCGCC 1 cut(s) 686
KpnI GGTACC 1 cut(s) 983
Ksp22I TGATCA 1 cut(s) 58
Kzo9I GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
LmnI GCTCC 1 cut(s) 488
Lsp1109I GCAGC 4 cut(s) 92, 121, 124, 1123
LweI GCATC 5 cut(s) 39, 55, 92, 520, 638
MaeI CTAG 5 cut(s) 458, 581, 702, 870, 1004
MaeII ACGT 2 cut(s) 958, 1084
MaeIII GTNAC 2 cut(s) 181, 460
MalI GATC 9 cut(s) 60, 95, 204, 279, 326, 393, 506, 643, 1002
MbiI CCGCTC 1 cut(s) 71
MboI GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
MboII GAAGA 7 cut(s) 17, 88, 113, 138, 405, 410, 976
MfeI CAATTG 1 cut(s) 836
MflI RGATCY 1 cut(s) 391
MhlI GDGCHC 2 cut(s) 542, 879
MlsI TGGCCA 1 cut(s) 842
MluCI AATT 5 cut(s) 11, 293, 836, 846, 1019
MluNI TGGCCA 1 cut(s) 842
Mly113I GGCGCC 1 cut(s) 687
MmeI TCCRAC 1 cut(s) 89
Mox20I TGGCCA 1 cut(s) 842
MscI TGGCCA 1 cut(s) 842
MslI CAYNNNNRTG 1 cut(s) 1214
Msp20I TGGCCA 1 cut(s) 842
MspI CCGG 4 cut(s) 125, 395, 452, 857
MspR9I CCNGG 2 cut(s) 806, 1092
MunI CAATTG 1 cut(s) 836
MvaI CCWGG 2 cut(s) 806, 1092
MvnI CGCG 2 cut(s) 267, 640
MwoI GCNNNNNNNGC 6 cut(s) 77, 134, 830, 839, 935, 1070
NarI GGCGCC 1 cut(s) 687
NcoI CCATGG 2 cut(s) 338, 1215
NdeII GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
NlaIII CATG 7 cut(s) 21, 229, 342, 883, 946, 1177, 1219
NlaIV GGNNCC 4 cut(s) 223, 688, 981, 1222
NmeAIII GCCGAG 2 cut(s) 794, 1040
NmuCI GTSAC 1 cut(s) 181
NspI RCATGY 1 cut(s) 1177
NspV TTCGAA 1 cut(s) 99
PciI ACATGT 1 cut(s) 1173
PkrI GCNGC 6 cut(s) 82, 136, 139, 547, 937, 1138
PluTI GGCGCC 1 cut(s) 690
PscI ACATGT 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 804, 1090
PspGI CCWGG 2 cut(s) 804, 1090
PspN4I GGNNCC 4 cut(s) 223, 688, 981, 1222
PspPI GGNCC 9 cut(s) 111, 122, 222, 335, 454, 656, 832, 937, 1024
PstI CTGCAG 1 cut(s) 1141
PsuI RGATCY 1 cut(s) 391
RsaI GTAC 2 cut(s) 973, 981
RsaNI GTAC 2 cut(s) 972, 980
RseI CAYNNNNRTG 1 cut(s) 1214
SalI GTCGAC 1 cut(s) 787
SatI GCNGC 6 cut(s) 81, 135, 138, 546, 936, 1137
Sau3AI GATC 9 cut(s) 58, 93, 202, 277, 324, 391, 504, 641, 1000
Sau96I GGNCC 9 cut(s) 111, 122, 222, 335, 454, 656, 832, 937, 1024
ScrFI CCNGG 2 cut(s) 806, 1092
SduI GDGCHC 2 cut(s) 542, 879
SfaNI GCATC 5 cut(s) 39, 55, 92, 520, 638
SfcI CTRYAG 2 cut(s) 825, 1137
SfiI GGCCNNNNNGGCC 2 cut(s) 839, 935
SfoI GGCGCC 1 cut(s) 688
SfuI TTCGAA 1 cut(s) 99
SinI GGWCC 3 cut(s) 111, 122, 222
SmiMI CAYNNNNRTG 1 cut(s) 1214
Sse9I AATT 5 cut(s) 11, 293, 836, 846, 1019
SsiI CCGC 6 cut(s) 69, 186, 545, 734, 935, 1116
SspDI GGCGCC 1 cut(s) 686
SspMI CTAG 5 cut(s) 458, 581, 702, 870, 1004
StyD4I CCNGG 2 cut(s) 804, 1090
StyI CCWWGG 3 cut(s) 207, 338, 1215
TaaI ACNGT 2 cut(s) 107, 163
TaiI ACGT 2 cut(s) 961, 1087
TaqI TCGA 5 cut(s) 99, 327, 378, 788, 1227
TasI AATT 5 cut(s) 11, 293, 836, 846, 1019
TauI GCSGC 2 cut(s) 548, 938
TscAI CASTG 4 cut(s) 168, 429, 916, 1162
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 4 cut(s) 80, 134, 137, 1136
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 1 cut(s) 564
TspGWI ACGGA 2 cut(s) 551, 766
TspRI CASTG 4 cut(s) 168, 429, 916, 1162
VpaK11BI GGWCC 3 cut(s) 111, 122, 222
XagI CCTNNNNNAGG 1 cut(s) 734
XapI RAATTY 1 cut(s) 846
XceI RCATGY 1 cut(s) 1177
XcmI CCANNNNNNNNNTGG 1 cut(s) 214
XmiI GTMKAC 1 cut(s) 788
XspI CTAG 5 cut(s) 458, 581, 702, 870, 1004
ZraI GACGTC 1 cut(s) 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.