FvH4_5g37291

Rho (Ras homology) subfamily of Ras-like small GTPases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000109
Physical Location & Seq
Reverse (-)
27424962 .. 27428096
3135 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37291.t1

Sequence Viewer

Length: 1134 bp
ATGGCCGAGACAATGACACAGTTCGTTCCTTCTTCTTCTTCTTCTTTGGTCCGAAGTAGAACACACAGTTTGTTCTACTTCAGCACAATCCAAAGTAAACGGTCAGATTCTGGTCATCTGATAGACGACCGAGCAAGGCGGTATGGCGACGCTTCCTCTACATCGGAGGAGGCGGCATCGGAGTGGTCGAACTCGGCACGCCCGGGGTCACCCACTGACGACTTATCTCTTTTGACAGGTTGGAAAAGAAAGCACATGACAAAGCATATTTCCCAGAGACATGCAGCCCGACCTCGCACCATAATTGTCTTTGCTCATCAAATCTGTGTCCCTATCTTGGAATCTTTCTCATCCATGCCCAAAGAATTTGGCTCAGCGAGATTCCTAGTGAAGCTCCAGTTCAAGTATGATCGAACTGTTGGCTTTTGTCGACAGTGTGGGCTTCTCGAGCACATGGCGGTGGGTTGTGGTGGTCCTCTTGTTTTTACACCGTGGTTCATAGAGATTGAGTCGATGAAGACACCTTTCAGATACCGGAACTCCATAATTGGTACACCCTCATTGTCATTTTCTCTTCCTGGCATCTCAGCTGCCGAGTTGGCTGTGGCTCTTGAGACCCTCGGGAAGAGAGGGCGCAATAAGGATCCTAACACCAATGCTCAGTTGATCATGGTGCCATTTGAACTTATTTTTCCAACCGACTTGGACTTGGCTCACTCTGATGGACATCTCACTGTGTCCTCAGCGAAGAAGTGCAAGATTGGACGTCCAAAAGGGTCAAAGAACAAGAAGAGGACTAAAGTGAAGCATGAGGTCAAGCTTGGTCCTCTTAAAGCAAAAAAGAGGAAATTTGGTGCCCGGAAGGTTACCGCTCGCACGACGCGGTCCACACTAGAGCCACCAAAATTCCTACATAGTCCTTCTGTCCACCCTACCACACCAAGGAAACGTGCCGCCAACATATCCATGCCCCTGCCACTGTGGCCACGGTTCAACCTAGCACCCGCCGCCATCCTTGCACCATGGAAGCCTCCGACAGTGCAAACTAAACCCCGCAACCATAATACATTCCCGCCATGTCCCAACCCCCTCACTCGTGCCCCGTCATCAACATCGATGAGCAAACCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632 Ras

Protein Analysis

378

Amino Acids

41.92

Weight (kDa)

10.54

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 769
AccB1I GGYRCC 2 cut(s) 673, 854
AccBSI CCGCTC 1 cut(s) 872
AccI GTMKAC 1 cut(s) 430
AccII CGCG 1 cut(s) 883
AclWI GGATC 2 cut(s) 638, 651
AcoI YGGCCR 2 cut(s) 3, 983
AcsI RAATTY 3 cut(s) 365, 848, 905
AcuI CTGAAG 1 cut(s) 64
AcyI GRCGYC 1 cut(s) 766
AfaI GTAC 1 cut(s) 553
AfiI CCNNNNNNNGG 2 cut(s) 337, 942
AgsI TTSAA 3 cut(s) 403, 683, 994
AjnI CCWGG 1 cut(s) 577
AluBI AGCT 3 cut(s) 394, 590, 820
AluI AGCT 3 cut(s) 394, 590, 820
Alw21I GWGCWC 1 cut(s) 453
Alw26I GTCTC 3 cut(s) 2, 271, 608
AlwI GGATC 2 cut(s) 638, 651
AlwNI CAGNNNCTG 1 cut(s) 110
Ama87I CYCGRG 3 cut(s) 202, 446, 620
AoxI GGCC 2 cut(s) 3, 983
ApeKI GCWGC 2 cut(s) 284, 590
ApoI RAATTY 3 cut(s) 365, 848, 905
AspLEI GCGC 1 cut(s) 636
AspS9I GGNCC 4 cut(s) 49, 473, 824, 885
AsuC2I CCSGG 3 cut(s) 203, 204, 859
AsuHPI GGTGA 1 cut(s) 201
AvaI CYCGRG 3 cut(s) 202, 446, 620
AvaII GGWCC 4 cut(s) 49, 473, 824, 885
BaeGI GKGCMC 2 cut(s) 859, 1102
BalI TGGCCA 1 cut(s) 985
BamHI GGATCC 1 cut(s) 643
BanI GGYRCC 2 cut(s) 673, 854
BauI CACGAG 1 cut(s) 1095
BbsI GAAGAC 1 cut(s) 524
Bbv12I GWGCWC 1 cut(s) 453
BbvCI CCTCAGC 1 cut(s) 742
BbvI GCAGC 2 cut(s) 296, 577
BccI CCATC 2 cut(s) 716, 1019
BciT130I CCWGG 1 cut(s) 579
BclI TGATCA 1 cut(s) 666
BcnI CCSGG 3 cut(s) 203, 204, 859
BcoDI GTCTC 3 cut(s) 2, 271, 608
BfaI CTAG 3 cut(s) 386, 893, 998
BglI GCCNNNNNGGC 2 cut(s) 599, 982
BisI GCNGC 5 cut(s) 174, 285, 591, 954, 1008
BlpI GCTNAGC 1 cut(s) 373
BlsI GCNGC 5 cut(s) 175, 286, 592, 955, 1009
Bme1390I CCNGG 4 cut(s) 203, 204, 579, 859
Bme18I GGWCC 4 cut(s) 49, 473, 824, 885
BmeT110I CYCGRG 3 cut(s) 202, 446, 620
BmgT120I GGNCC 4 cut(s) 49, 473, 824, 885
BmiI GGNNCC 3 cut(s) 645, 675, 856
BmrFI CCNGG 4 cut(s) 203, 204, 579, 859
BmsI GCATC 2 cut(s) 185, 591
BpiI GAAGAC 1 cut(s) 524
BpmI CTGGAG 1 cut(s) 380
Bpu10I CCTNAGC 1 cut(s) 742
Bpu1102I GCTNAGC 1 cut(s) 373
BpuEI CTTGAG 1 cut(s) 632
BpuMI CCSGG 3 cut(s) 203, 204, 859
Bsa29I ATCGAT 1 cut(s) 1115
BsaBI GATNNNNATC 1 cut(s) 726
BsaHI GRCGYC 1 cut(s) 766
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 7 cut(s) 202, 203, 491, 619, 941, 986, 1022
BsaWI WCCGGW 1 cut(s) 534
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bsc4I CCNNNNNNNGG 2 cut(s) 337, 942
Bse1I ACTGG 1 cut(s) 397
Bse8I GATNNNNATC 1 cut(s) 726
BseBI CCWGG 1 cut(s) 579
BseCI ATCGAT 1 cut(s) 1115
BseDI CCNNGG 7 cut(s) 202, 203, 491, 619, 941, 986, 1022
BseGI GGATG 2 cut(s) 350, 1011
BseJI GATNNNNATC 1 cut(s) 726
BseLI CCNNNNNNNGG 2 cut(s) 337, 942
BseMII CTCAG 4 cut(s) 387, 600, 674, 756
BseNI ACTGG 1 cut(s) 397
BseRI GAGGAG 1 cut(s) 182
BseSI GKGCMC 2 cut(s) 859, 1102
BseXI GCAGC 2 cut(s) 296, 577
Bsh1236I CGCG 1 cut(s) 883
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 2 cut(s) 5, 985
BshNI GGYRCC 2 cut(s) 673, 854
BshVI ATCGAT 1 cut(s) 1115
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 1 cut(s) 453
BsiHKCI CYCGRG 3 cut(s) 202, 446, 620
BsiSI CCGG 3 cut(s) 203, 535, 859
BslFI GGGAC 2 cut(s) 314, 1065
BslI CCNNNNNNNGG 2 cut(s) 337, 942
BsmAI GTCTC 3 cut(s) 2, 271, 608
BsmFI GGGAC 2 cut(s) 314, 1065
BsnI GGCC 2 cut(s) 5, 985
Bso31I GGTCTC 1 cut(s) 608
BsoBI CYCGRG 3 cut(s) 202, 446, 620
Bsp1286I GDGCHC 3 cut(s) 453, 859, 1102
Bsp143I GATC 3 cut(s) 409, 643, 666
Bsp1720I GCTNAGC 1 cut(s) 373
Bsp19I CCATGG 1 cut(s) 1022
BspANI GGCC 2 cut(s) 5, 985
BspCNI CTCAG 4 cut(s) 386, 599, 673, 755
BspDI ATCGAT 1 cut(s) 1115
BspFNI CGCG 1 cut(s) 883
BspLI GGNNCC 3 cut(s) 645, 675, 856
BspPI GGATC 2 cut(s) 638, 651
BspT107I GGYRCC 2 cut(s) 673, 854
BspTNI GGTCTC 1 cut(s) 608
BsrBI CCGCTC 1 cut(s) 872
BsrI ACTGG 1 cut(s) 397
BssECI CCNNGG 7 cut(s) 202, 203, 491, 619, 941, 986, 1022
BssMI GATC 3 cut(s) 409, 643, 666
BssNI GRCGYC 1 cut(s) 766
BssSI CACGAG 1 cut(s) 1095
BssT1I CCWWGG 2 cut(s) 941, 1022
Bst2BI CACGAG 1 cut(s) 1095
Bst2UI CCWGG 1 cut(s) 579
Bst6I CTCTTC 3 cut(s) 579, 620, 785
BstACI GRCGYC 1 cut(s) 766
BstC8I GCNNGC 2 cut(s) 199, 874
BstDEI CTNAG 4 cut(s) 373, 586, 660, 742
BstDSI CCRYGG 3 cut(s) 491, 986, 1022
BstEII GGTNACC 2 cut(s) 207, 865
BstF5I GGATG 2 cut(s) 350, 1011
BstFNI CGCG 1 cut(s) 883
BstHHI GCGC 1 cut(s) 636
BstKTI GATC 3 cut(s) 412, 646, 669
BstMAI GTCTC 3 cut(s) 2, 271, 608
BstMBI GATC 3 cut(s) 409, 643, 666
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 5 cut(s) 448, 599, 982, 1007, 1016
BstNI CCWGG 1 cut(s) 579
BstNSI RCATGY 1 cut(s) 284
BstPI GGTNACC 2 cut(s) 207, 865
BstSCI CCNGG 4 cut(s) 201, 202, 577, 857
BstSLI GKGCMC 2 cut(s) 859, 1102
BstUI CGCG 1 cut(s) 883
BstV1I GCAGC 2 cut(s) 296, 577
BstV2I GAAGAC 1 cut(s) 524
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 1115
BsuRI GGCC 2 cut(s) 5, 985
BsuTUI ATCGAT 1 cut(s) 1115
BtgI CCRYGG 3 cut(s) 491, 986, 1022
BtsCI GGATG 2 cut(s) 350, 1011
BtsIMutI CAGTG 5 cut(s) 213, 440, 732, 977, 1044
Cac8I GCNNGC 2 cut(s) 199, 874
CaiI CAGNNNCTG 1 cut(s) 110
CfoI GCGC 1 cut(s) 636
Cfr13I GGNCC 4 cut(s) 49, 473, 824, 885
Cfr9I CCCGGG 1 cut(s) 202
ClaI ATCGAT 1 cut(s) 1115
CseI GACGC 2 cut(s) 158, 889
Csp6I GTAC 1 cut(s) 552
CviAII CATG 9 cut(s) 256, 281, 355, 454, 670, 809, 967, 1023, 1077
CviQI GTAC 1 cut(s) 552
DdeI CTNAG 4 cut(s) 373, 586, 660, 742
DpnI GATC 3 cut(s) 411, 645, 668
DpnII GATC 3 cut(s) 409, 643, 666
EaeI YGGCCR 2 cut(s) 3, 983
Eam1104I CTCTTC 3 cut(s) 579, 620, 785
EarI CTCTTC 3 cut(s) 579, 620, 785
Eco130I CCWWGG 2 cut(s) 941, 1022
Eco31I GGTCTC 1 cut(s) 608
Eco47I GGWCC 4 cut(s) 49, 473, 824, 885
Eco57I CTGAAG 1 cut(s) 64
Eco88I CYCGRG 3 cut(s) 202, 446, 620
Eco91I GGTNACC 2 cut(s) 207, 865
EcoO65I GGTNACC 2 cut(s) 207, 865
EcoRII CCWGG 1 cut(s) 577
EcoT14I CCWWGG 2 cut(s) 941, 1022
ErhI CCWWGG 2 cut(s) 941, 1022
FaeI CATG 9 cut(s) 259, 284, 358, 457, 673, 812, 970, 1026, 1080
FaqI GGGAC 2 cut(s) 314, 1065
FatI CATG 9 cut(s) 255, 280, 354, 453, 669, 808, 966, 1022, 1076
FauI CCCGC 3 cut(s) 1012, 1061, 1080
FbaI TGATCA 1 cut(s) 666
FblI GTMKAC 1 cut(s) 430
Fnu4HI GCNGC 5 cut(s) 174, 285, 591, 954, 1008
FokI GGATG 2 cut(s) 337, 998
Fsp4HI GCNGC 5 cut(s) 174, 285, 591, 954, 1008
FspBI CTAG 3 cut(s) 386, 893, 998
GlaI GCGC 1 cut(s) 635
GluI GCNGC 5 cut(s) 174, 285, 591, 954, 1008
GsuI CTGGAG 1 cut(s) 380
HaeIII GGCC 2 cut(s) 5, 985
HapII CCGG 3 cut(s) 203, 535, 859
HgaI GACGC 2 cut(s) 158, 889
HhaI GCGC 1 cut(s) 636
Hin1I GRCGYC 1 cut(s) 766
Hin1II CATG 9 cut(s) 259, 284, 358, 457, 673, 812, 970, 1026, 1080
Hin6I GCGC 1 cut(s) 634
HinP1I GCGC 1 cut(s) 634
HincII GTYRAC 1 cut(s) 431
HindII GTYRAC 1 cut(s) 431
HindIII AAGCTT 1 cut(s) 818
HinfI GANTC 4 cut(s) 107, 341, 381, 509
HpaII CCGG 3 cut(s) 203, 535, 859
HphI GGTGA 1 cut(s) 201
Hpy166II GTNNAC 5 cut(s) 98, 431, 554, 888, 928
Hpy188I TCNGA 8 cut(s) 53, 106, 120, 166, 181, 530, 721, 1035
Hpy188III TCNNGA 3 cut(s) 446, 611, 622
Hpy8I GTNNAC 5 cut(s) 98, 431, 554, 888, 928
Hpy99I CGWCG 2 cut(s) 152, 883
HpyAV CCTTC 3 cut(s) 39, 856, 930
HpyCH4IV ACGT 2 cut(s) 766, 949
HpyCH4V TGCA 4 cut(s) 284, 756, 1019, 1042
HpyF10VI GCNNNNNNNGC 5 cut(s) 448, 599, 982, 1007, 1016
HpyF3I CTNAG 4 cut(s) 373, 586, 660, 742
HpySE526I ACGT 2 cut(s) 766, 949
Hsp92I GRCGYC 1 cut(s) 766
Hsp92II CATG 9 cut(s) 259, 284, 358, 457, 673, 812, 970, 1026, 1080
HspAI GCGC 1 cut(s) 634
Ksp22I TGATCA 1 cut(s) 666
Kzo9I GATC 3 cut(s) 409, 643, 666
LmnI GCTCC 1 cut(s) 399
Lsp1109I GCAGC 2 cut(s) 296, 577
LweI GCATC 2 cut(s) 185, 591
MaeI CTAG 3 cut(s) 386, 893, 998
MaeII ACGT 2 cut(s) 766, 949
MaeIII GTNAC 2 cut(s) 207, 865
MalI GATC 3 cut(s) 411, 645, 668
MbiI CCGCTC 1 cut(s) 872
MboI GATC 3 cut(s) 409, 643, 666
MboII GAAGA 9 cut(s) 24, 27, 30, 33, 529, 566, 637, 760, 802
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 3 cut(s) 453, 859, 1102
MlsI TGGCCA 1 cut(s) 985
MluCI AATT 5 cut(s) 303, 365, 546, 848, 905
MluNI TGGCCA 1 cut(s) 985
MlyI GAGTC 1 cut(s) 518
MmeI TCCRAC 3 cut(s) 221, 719, 1058
Mox20I TGGCCA 1 cut(s) 985
MscI TGGCCA 1 cut(s) 985
MseI TTAA 1 cut(s) 831
MslI CAYNNNNRTG 4 cut(s) 181, 458, 720, 965
Msp20I TGGCCA 1 cut(s) 985
MspA1I CMGCKG 1 cut(s) 590
MspI CCGG 3 cut(s) 203, 535, 859
MspR9I CCNGG 4 cut(s) 203, 204, 579, 859
MvaI CCWGG 1 cut(s) 579
MvnI CGCG 1 cut(s) 883
MwoI GCNNNNNNNGC 5 cut(s) 448, 599, 982, 1007, 1016
NciI CCSGG 3 cut(s) 203, 204, 859
NcoI CCATGG 1 cut(s) 1022
NdeII GATC 3 cut(s) 409, 643, 666
NlaIII CATG 9 cut(s) 259, 284, 358, 457, 673, 812, 970, 1026, 1080
NlaIV GGNNCC 3 cut(s) 645, 675, 856
NmeAIII GCCGAG 3 cut(s) 31, 173, 619
NmuCI GTSAC 1 cut(s) 207
NspI RCATGY 1 cut(s) 284
PaeR7I CTCGAG 1 cut(s) 446
PcsI WCGNNNNNNNCGW 1 cut(s) 185
PfeI GAWTC 3 cut(s) 107, 341, 381
PflFI GACNNNGTC 1 cut(s) 883
PkrI GCNGC 5 cut(s) 175, 286, 592, 955, 1009
PleI GAGTC 1 cut(s) 517
PpsI GAGTC 1 cut(s) 517
Psp6I CCWGG 1 cut(s) 577
PspEI GGTNACC 2 cut(s) 207, 865
PspGI CCWGG 1 cut(s) 577
PspN4I GGNNCC 3 cut(s) 645, 675, 856
PspPI GGNCC 4 cut(s) 49, 473, 824, 885
PstNI CAGNNNCTG 1 cut(s) 110
PsuI RGATCY 1 cut(s) 643
PsyI GACNNNGTC 1 cut(s) 883
PvuII CAGCTG 1 cut(s) 590
RsaI GTAC 1 cut(s) 553
RsaNI GTAC 1 cut(s) 552
RseI CAYNNNNRTG 4 cut(s) 181, 458, 720, 965
SalI GTCGAC 1 cut(s) 429
SaqAI TTAA 1 cut(s) 831
SatI GCNGC 5 cut(s) 174, 285, 591, 954, 1008
Sau3AI GATC 3 cut(s) 409, 643, 666
Sau96I GGNCC 4 cut(s) 49, 473, 824, 885
SchI GAGTC 1 cut(s) 518
ScrFI CCNGG 4 cut(s) 203, 204, 579, 859
SduI GDGCHC 3 cut(s) 453, 859, 1102
SfaNI GCATC 2 cut(s) 185, 591
Sfr274I CTCGAG 1 cut(s) 446
SinI GGWCC 4 cut(s) 49, 473, 824, 885
SlaI CTCGAG 1 cut(s) 446
SmaI CCCGGG 1 cut(s) 204
SmiMI CAYNNNNRTG 4 cut(s) 181, 458, 720, 965
SmlI CTYRAG 2 cut(s) 446, 611
SmoI CTYRAG 2 cut(s) 446, 611
Sse9I AATT 5 cut(s) 303, 365, 546, 848, 905
SspMI CTAG 3 cut(s) 386, 893, 998
StyD4I CCNGG 4 cut(s) 201, 202, 577, 857
StyI CCWWGG 2 cut(s) 941, 1022
TaiI ACGT 2 cut(s) 769, 952
TaqI TCGA 6 cut(s) 188, 412, 430, 447, 512, 1115
TaqII GACCGA 1 cut(s) 144
TasI AATT 5 cut(s) 303, 365, 546, 848, 905
TauI GCSGC 3 cut(s) 176, 956, 1010
TfiI GAWTC 3 cut(s) 107, 341, 381
Tru1I TTAA 1 cut(s) 831
Tru9I TTAA 1 cut(s) 831
TscAI CASTG 5 cut(s) 220, 440, 739, 984, 1044
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 2 cut(s) 284, 590
Tsp45I GTSAC 1 cut(s) 207
TspDTI ATGAA 2 cut(s) 487, 530
TspMI CCCGGG 1 cut(s) 202
TspRI CASTG 5 cut(s) 220, 440, 739, 984, 1044
Tth111I GACNNNGTC 1 cut(s) 883
VpaK11BI GGWCC 4 cut(s) 49, 473, 824, 885
XapI RAATTY 3 cut(s) 365, 848, 905
XceI RCATGY 1 cut(s) 284
XhoI CTCGAG 1 cut(s) 446
XmaI CCCGGG 1 cut(s) 202
XmiI GTMKAC 1 cut(s) 430
XspI CTAG 3 cut(s) 386, 893, 998
ZraI GACGTC 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.