FvH4_7g10071

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000109
Physical Location & Seq
Reverse (-)
9513327 .. 9514660
1334 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g10071.t1

Sequence Viewer

Length: 1236 bp
ATGATGGTTGACGACGTTTCCCGGCTTGCGGCGGCGATGGCGATCTCGGAGAACGGGAGGGTCTCGTTCGGGGCAGCGGGGGCAGCAGCTTTTTCAGGCCATTCTTATGCAGTAGGAAGGCATCTTTCTCCGAAGCAAAAGGTGGAGCCTAAGGCTTTCATGGCCACGATGGGTTCCCTCTGGGGTTTGCGCAATCGACTCACCATCAGGCCACAAGAGTATGATGGCCGCTCTGATGCAGCGGCGGTTCCAATTGTTTCTGTTCCGGTGTGGGTCGAAGTCTTTGGCCTCCCACCATATCTGATGACCAAGCAAGCACTCTACATAGTGGGTTCAACACTTGGCCGTATCATCACTTATGACAACCCTAGGCTGCTTAACGATTCCAAGGCTAGGGTTCATATTGATCATCAAATTTCTGATCTAGTGAAGCAGGCGTTCCCTCCCATACGGTTTAAGTTTGGTGAAGGTGCTAATCTGACTGTTACAATGCTCACATTCAAATATGAGCGTATGTGCGGCTTTTGCAGAGTTTGTGGTTTGTTGGAACACAAAGCCGGAGGGTGTCAAGGTCCTCCAAACATGTCGGCGGCAGCGGGTGAGCAAGGATATGGAAGTAGGGTTATCCCTAACCCAAACCCTAGCAGCAGCTCCTCTATTGTAAACCCGTTTCCAGCTTCGGGTTTTGTTTTATCCAAGCCGGGTATGACAGCGGCAGTGCTTACTGCCTCCCTCCAACGTCGTCCTAATCCTATACCGGTCGTCGCTCCTCAAGCTCTAGTTCTGGTTTCTCAAGCCAAGTCCCTGCCGCTTGTATTGTTTGGGAAGCAACGGTCGGTTGCGTCCCTAATGCTTGAAGATCAAGGTAAGCATCCGAAAGGCATGGTGGTGGTTGAGTCAGAGGAGCATCCTACGCTCGGTCCTGTCCTGGAGCTTTCTCTTCCTCACTTGGCAGGGTCGTTGATTGTTTCTCCCCCGAAGAAACGTAAAGTTGGGCGTCTGTTAGGCTCTCTAATCAAGAAGAAGGAAGAGGTAATCCATCCTTGGCAATTGGAGGCGAAAGCACAAACTAAGAGCTCCAAGTCTAAGAAGAGGTCCTTCGGTTCTGCAAAAAGGACTCTAAATTTGGGAGAGGAGGATTCGGTTAGCATTACACCGAAGGCCTCGATTGGTACTGCATCGGAGGATATGGCGGTGGAGACGGGTGAAACCGCCGAAACTACTCCCTCTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

412

Amino Acids

44.02

Weight (kDa)

9.66

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 152 - 190 2.5e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 191
AccBSI CCGCTC 1 cut(s) 231
AcoI YGGCCR 3 cut(s) 162, 226, 343
AcsI RAATTY 2 cut(s) 414, 1123
AcyI GRCGYC 1 cut(s) 997
AfaI GTAC 1 cut(s) 1174
AfiI CCNNNNNNNGG 4 cut(s) 28, 393, 680, 917
AflIII ACRYGT 1 cut(s) 582
AgeI ACCGGT 1 cut(s) 757
AgsI TTSAA 3 cut(s) 336, 502, 857
AjnI CCWGG 1 cut(s) 927
AluBI AGCT 6 cut(s) 89, 651, 677, 776, 934, 1077
AluI AGCT 6 cut(s) 89, 651, 677, 776, 934, 1077
Alw21I GWGCWC 1 cut(s) 1079
Alw26I GTCTC 2 cut(s) 67, 1193
AoxI GGCC 7 cut(s) 97, 162, 209, 226, 286, 343, 1161
ApeKI GCWGC 8 cut(s) 74, 83, 86, 239, 373, 593, 645, 648
ApoI RAATTY 2 cut(s) 414, 1123
ArsI GACNNNNNNTTYG 2 cut(s) 1108, 1140
AsiGI ACCGGT 1 cut(s) 757
AspA2I CCTAGG 1 cut(s) 368
AspLEI GCGC 1 cut(s) 192
AspS9I GGNCC 3 cut(s) 572, 920, 1095
AsuC2I CCSGG 2 cut(s) 22, 702
AsuHPI GGTGA 4 cut(s) 193, 476, 611, 1217
AvaII GGWCC 3 cut(s) 572, 920, 1095
AvrII CCTAGG 1 cut(s) 368
AxyI CCTNAGG 1 cut(s) 150
BalI TGGCCA 1 cut(s) 164
BanII GRGCYC 1 cut(s) 1079
Bbv12I GWGCWC 1 cut(s) 1079
BbvI GCAGC 8 cut(s) 86, 95, 98, 251, 360, 605, 657, 660
BccI CCATC 5 cut(s) 31, 163, 212, 218, 1047
BceAI ACGGC 1 cut(s) 330
BciT130I CCWGG 1 cut(s) 929
BclI TGATCA 1 cut(s) 406
BcnI CCSGG 2 cut(s) 22, 702
BcoDI GTCTC 2 cut(s) 67, 1193
BfaI CTAG 5 cut(s) 369, 393, 425, 642, 779
BlnI CCTAGG 1 cut(s) 368
Bme1390I CCNGG 3 cut(s) 22, 702, 929
Bme18I GGWCC 3 cut(s) 572, 920, 1095
BmgT120I GGNCC 3 cut(s) 572, 920, 1095
BmiI GGNNCC 3 cut(s) 147, 175, 249
BmrFI CCNGG 3 cut(s) 22, 702, 929
BmsI GCATC 5 cut(s) 130, 226, 880, 916, 1187
BpmI CTGGAG 1 cut(s) 950
BpuEI CTTGAG 2 cut(s) 756, 777
BpuMI CCSGG 2 cut(s) 22, 702
BsaBI GATNNNNATC 1 cut(s) 41
BsaHI GRCGYC 1 cut(s) 997
BsaI GGTCTC 1 cut(s) 67
BsaJI CCNNGG 3 cut(s) 368, 387, 1043
BsaWI WCCGGW 2 cut(s) 265, 757
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 393, 680, 917
Bse118I RCCGGY 1 cut(s) 757
Bse21I CCTNAGG 1 cut(s) 150
Bse8I GATNNNNATC 1 cut(s) 41
BseBI CCWGG 1 cut(s) 929
BseDI CCNNGG 3 cut(s) 368, 387, 1043
BseGI GGATG 3 cut(s) 871, 907, 1039
BseJI GATNNNNATC 1 cut(s) 41
BseLI CCNNNNNNNGG 4 cut(s) 28, 393, 680, 917
BseRI GAGGAG 4 cut(s) 643, 759, 917, 1148
BseXI GCAGC 8 cut(s) 86, 95, 98, 251, 360, 605, 657, 660
Bsh1285I CGRYCG 2 cut(s) 762, 836
BshFI GGCC 7 cut(s) 99, 164, 211, 228, 288, 345, 1163
BshTI ACCGGT 1 cut(s) 757
BsiEI CGRYCG 2 cut(s) 762, 836
BsiHKAI GWGCWC 1 cut(s) 1079
BsiSI CCGG 5 cut(s) 22, 266, 558, 701, 758
BslFI GGGAC 2 cut(s) 787, 829
BslI CCNNNNNNNGG 4 cut(s) 28, 393, 680, 917
BsmAI GTCTC 2 cut(s) 67, 1193
BsmBI CGTCTC 1 cut(s) 1193
BsmFI GGGAC 2 cut(s) 787, 829
BsnI GGCC 7 cut(s) 99, 164, 211, 228, 288, 345, 1163
Bso31I GGTCTC 1 cut(s) 67
Bsp1286I GDGCHC 1 cut(s) 1079
Bsp143I GATC 4 cut(s) 42, 406, 421, 859
BspANI GGCC 7 cut(s) 99, 164, 211, 228, 288, 345, 1163
BspLI GGNNCC 3 cut(s) 147, 175, 249
BspTNI GGTCTC 1 cut(s) 67
BsrBI CCGCTC 1 cut(s) 231
BsrFI RCCGGY 1 cut(s) 757
BssAI RCCGGY 1 cut(s) 757
BssECI CCNNGG 3 cut(s) 368, 387, 1043
BssMI GATC 4 cut(s) 42, 406, 421, 859
BssNI GRCGYC 1 cut(s) 997
BssT1I CCWWGG 3 cut(s) 368, 387, 1043
Bst2UI CCWGG 1 cut(s) 929
Bst4CI ACNGT 3 cut(s) 453, 484, 834
Bst6I CTCTTC 3 cut(s) 945, 1023, 1085
BstACI GRCGYC 1 cut(s) 997
BstC8I GCNNGC 3 cut(s) 27, 315, 435
BstDEI CTNAG 3 cut(s) 150, 1071, 1086
BstF5I GGATG 3 cut(s) 871, 907, 1039
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 4 cut(s) 45, 409, 424, 862
BstMAI GTCTC 2 cut(s) 67, 1193
BstMBI GATC 4 cut(s) 42, 406, 421, 859
BstMCI CGRYCG 2 cut(s) 762, 836
BstMWI GCNNNNNNNGC 7 cut(s) 38, 80, 83, 161, 525, 773, 913
BstNI CCWGG 1 cut(s) 929
BstNSI RCATGY 1 cut(s) 586
BstSCI CCNGG 3 cut(s) 20, 700, 927
BstV1I GCAGC 8 cut(s) 86, 95, 98, 251, 360, 605, 657, 660
Bsu36I CCTNAGG 1 cut(s) 150
BsuRI GGCC 7 cut(s) 99, 164, 211, 228, 288, 345, 1163
BtgZI GCGATG 1 cut(s) 50
BtsCI GGATG 3 cut(s) 871, 907, 1039
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 1 cut(s) 723
Cac8I GCNNGC 3 cut(s) 27, 315, 435
CfoI GCGC 1 cut(s) 192
Cfr10I RCCGGY 1 cut(s) 757
Cfr13I GGNCC 3 cut(s) 572, 920, 1095
CseI GACGC 2 cut(s) 831, 986
Csp6I GTAC 1 cut(s) 1173
CspAI ACCGGT 1 cut(s) 757
CviAII CATG 3 cut(s) 160, 583, 883
CviQI GTAC 1 cut(s) 1173
DdeI CTNAG 3 cut(s) 150, 1071, 1086
DpnI GATC 4 cut(s) 44, 408, 423, 861
DpnII GATC 4 cut(s) 42, 406, 421, 859
EaeI YGGCCR 3 cut(s) 162, 226, 343
Eam1104I CTCTTC 3 cut(s) 945, 1023, 1085
EarI CTCTTC 3 cut(s) 945, 1023, 1085
Ecl136II GAGCTC 1 cut(s) 1077
Eco130I CCWWGG 3 cut(s) 368, 387, 1043
Eco147I AGGCCT 1 cut(s) 1163
Eco24I GRGCYC 1 cut(s) 1079
Eco31I GGTCTC 1 cut(s) 67
Eco47I GGWCC 3 cut(s) 572, 920, 1095
Eco53kI GAGCTC 1 cut(s) 1077
Eco81I CCTNAGG 1 cut(s) 150
EcoICRI GAGCTC 1 cut(s) 1077
EcoO109I RGGNCCY 2 cut(s) 572, 1095
EcoRII CCWGG 1 cut(s) 927
EcoT14I CCWWGG 3 cut(s) 368, 387, 1043
EcoT38I GRGCYC 1 cut(s) 1079
ErhI CCWWGG 3 cut(s) 368, 387, 1043
Esp3I CGTCTC 1 cut(s) 1193
FaeI CATG 3 cut(s) 163, 586, 886
FalI AAGNNNNNCTT 2 cut(s) 1082, 1114
FaqI GGGAC 2 cut(s) 787, 829
FatI CATG 3 cut(s) 159, 582, 882
FauI CCCGC 2 cut(s) 70, 589
FbaI TGATCA 1 cut(s) 406
FokI GGATG 3 cut(s) 858, 894, 1026
FriOI GRGCYC 1 cut(s) 1079
FspBI CTAG 5 cut(s) 369, 393, 425, 642, 779
FspI TGCGCA 1 cut(s) 191
GlaI GCGC 1 cut(s) 191
GsuI CTGGAG 1 cut(s) 950
HaeIII GGCC 7 cut(s) 99, 164, 211, 228, 288, 345, 1163
HapII CCGG 5 cut(s) 22, 266, 558, 701, 758
HgaI GACGC 2 cut(s) 831, 986
HhaI GCGC 1 cut(s) 192
Hin1I GRCGYC 1 cut(s) 997
Hin1II CATG 3 cut(s) 163, 586, 886
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HincII GTYRAC 1 cut(s) 10
HindII GTYRAC 1 cut(s) 10
HinfI GANTC 5 cut(s) 198, 383, 896, 1117, 1139
HpaII CCGG 5 cut(s) 22, 266, 558, 701, 758
HphI GGTGA 4 cut(s) 193, 476, 611, 1217
Hpy166II GTNNAC 2 cut(s) 10, 664
Hpy188I TCNGA 9 cut(s) 49, 132, 235, 303, 421, 480, 876, 901, 1183
Hpy188III TCNNGA 1 cut(s) 1018
Hpy8I GTNNAC 2 cut(s) 10, 664
Hpy99I CGWCG 3 cut(s) 17, 744, 767
HpyAV CCTTC 5 cut(s) 111, 461, 1018, 1108, 1153
HpyCH4III ACNGT 3 cut(s) 453, 484, 834
HpyCH4IV ACGT 3 cut(s) 15, 739, 985
HpyCH4V TGCA 5 cut(s) 110, 239, 528, 1109, 1178
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 80, 83, 161, 525, 773, 913
HpyF3I CTNAG 3 cut(s) 150, 1071, 1086
HpySE526I ACGT 3 cut(s) 15, 739, 985
Hsp92I GRCGYC 1 cut(s) 997
Hsp92II CATG 3 cut(s) 163, 586, 886
HspAI GCGC 1 cut(s) 190
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 4 cut(s) 42, 406, 421, 859
LmnI GCTCC 6 cut(s) 145, 656, 772, 904, 931, 1082
Lsp1109I GCAGC 8 cut(s) 86, 95, 98, 251, 360, 605, 657, 660
LweI GCATC 5 cut(s) 130, 226, 880, 916, 1187
MaeI CTAG 5 cut(s) 369, 393, 425, 642, 779
MaeII ACGT 3 cut(s) 15, 739, 985
MaeIII GTNAC 1 cut(s) 484
MalI GATC 4 cut(s) 44, 408, 423, 861
MbiI CCGCTC 1 cut(s) 231
MboI GATC 4 cut(s) 42, 406, 421, 859
MboII GAAGA 6 cut(s) 869, 932, 991, 1033, 1040, 1102
MfeI CAATTG 2 cut(s) 252, 1049
MhlI GDGCHC 1 cut(s) 1079
MlsI TGGCCA 1 cut(s) 164
MluCI AATT 4 cut(s) 252, 414, 1049, 1123
MluNI TGGCCA 1 cut(s) 164
MlyI GAGTC 3 cut(s) 192, 905, 1111
MmeI TCCRAC 2 cut(s) 525, 760
Mox20I TGGCCA 1 cut(s) 164
MscI TGGCCA 1 cut(s) 164
MseI TTAA 2 cut(s) 378, 456
MslI CAYNNNNRTG 2 cut(s) 105, 887
Msp20I TGGCCA 1 cut(s) 164
MspA1I CMGCKG 4 cut(s) 77, 242, 596, 713
MspI CCGG 5 cut(s) 22, 266, 558, 701, 758
MspR9I CCNGG 3 cut(s) 22, 702, 929
MunI CAATTG 2 cut(s) 252, 1049
MvaI CCWGG 1 cut(s) 929
MwoI GCNNNNNNNGC 7 cut(s) 38, 80, 83, 161, 525, 773, 913
NciI CCSGG 2 cut(s) 22, 702
NdeII GATC 4 cut(s) 42, 406, 421, 859
NlaIII CATG 3 cut(s) 163, 586, 886
NlaIV GGNNCC 3 cut(s) 147, 175, 249
NsbI TGCGCA 1 cut(s) 191
NspI RCATGY 1 cut(s) 586
PceI AGGCCT 1 cut(s) 1163
PciI ACATGT 1 cut(s) 582
PfeI GAWTC 2 cut(s) 383, 1139
PfoI TCCNGGA 1 cut(s) 927
PinAI ACCGGT 1 cut(s) 757
PleI GAGTC 3 cut(s) 192, 904, 1111
PpsI GAGTC 3 cut(s) 192, 904, 1111
PpuMI RGGWCCY 2 cut(s) 572, 1095
PscI ACATGT 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 1079
Psp5II RGGWCCY 2 cut(s) 572, 1095
Psp6I CCWGG 1 cut(s) 927
PspGI CCWGG 1 cut(s) 927
PspN4I GGNNCC 3 cut(s) 147, 175, 249
PspPI GGNCC 3 cut(s) 572, 920, 1095
PspPPI RGGWCCY 2 cut(s) 572, 1095
RsaI GTAC 1 cut(s) 1174
RsaNI GTAC 1 cut(s) 1173
RseI CAYNNNNRTG 2 cut(s) 105, 887
SacI GAGCTC 1 cut(s) 1079
SaqAI TTAA 2 cut(s) 378, 456
Sau3AI GATC 4 cut(s) 42, 406, 421, 859
Sau96I GGNCC 3 cut(s) 572, 920, 1095
SchI GAGTC 3 cut(s) 192, 905, 1111
ScrFI CCNGG 3 cut(s) 22, 702, 929
SduI GDGCHC 1 cut(s) 1079
SfaNI GCATC 5 cut(s) 130, 226, 880, 916, 1187
SinI GGWCC 3 cut(s) 572, 920, 1095
SmiMI CAYNNNNRTG 2 cut(s) 105, 887
SmlI CTYRAG 2 cut(s) 771, 792
SmoI CTYRAG 2 cut(s) 771, 792
Sse9I AATT 4 cut(s) 252, 414, 1049, 1123
SseBI AGGCCT 1 cut(s) 1163
SspMI CTAG 5 cut(s) 369, 393, 425, 642, 779
SstI GAGCTC 1 cut(s) 1079
StuI AGGCCT 1 cut(s) 1163
StyD4I CCNGG 3 cut(s) 20, 700, 927
StyI CCWWGG 3 cut(s) 368, 387, 1043
TaaI ACNGT 3 cut(s) 453, 484, 834
TaiI ACGT 3 cut(s) 18, 742, 988
TaqI TCGA 3 cut(s) 196, 276, 1166
TaqII GACCGA 1 cut(s) 908
TasI AATT 4 cut(s) 252, 414, 1049, 1123
TauI GCSGC 8 cut(s) 32, 35, 231, 245, 522, 593, 716, 811
TfiI GAWTC 2 cut(s) 383, 1139
Tru1I TTAA 2 cut(s) 378, 456
Tru9I TTAA 2 cut(s) 378, 456
TscAI CASTG 1 cut(s) 723
TseI GCWGC 8 cut(s) 74, 83, 86, 239, 373, 593, 645, 648
TspDTI ATGAA 2 cut(s) 148, 389
TspRI CASTG 1 cut(s) 723
VpaK11BI GGWCC 3 cut(s) 572, 920, 1095
XapI RAATTY 2 cut(s) 414, 1123
XceI RCATGY 1 cut(s) 586
XmaJI CCTAGG 1 cut(s) 368
XspI CTAG 5 cut(s) 369, 393, 425, 642, 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.