Belongs to the eukaryotic ribosomal protein eS8 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PUF | PF00806 | 618 - 652 | 1.9e-10 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 654 - 687 | 3.3e-09 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 690 - 723 | 4.6e-09 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 762 - 797 | 2.3e-13 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 802 - 832 | 1.4e-06 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 835 - 868 | 6.7e-11 | Pumilio-family RNA binding repeat |
| PUF | PF00806 | 881 - 910 | 4.6e-08 | Pumilio-family RNA binding repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1788, 2264 |
| AarI | CACCTGC | 1 cut(s) | 839 |
| AatII | GACGTC | 1 cut(s) | 403 |
| Acc36I | ACCTGC | 1 cut(s) | 839 |
| Acc65I | GGTACC | 1 cut(s) | 670 |
| AccB1I | GGYRCC | 2 cut(s) | 670, 1749 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1247, 1643 |
| AccI | GTMKAC | 1 cut(s) | 626 |
| AciI | CCGC | 4 cut(s) | 932, 1328, 1533, 1822 |
| AclWI | GGATC | 5 cut(s) | 311, 1047, 1409, 2052, 2817 |
| AcoI | YGGCCR | 4 cut(s) | 210, 929, 1471, 1742 |
| AcsI | RAATTY | 7 cut(s) | 1064, 1168, 1585, 1782, 1862, 2070, 2528 |
| AcyI | GRCGYC | 1 cut(s) | 400 |
| AfaI | GTAC | 7 cut(s) | 672, 924, 1089, 2160, 2350, 2511, 2695 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 193, 437, 1247, 1571, 1643, 2618 |
| AflIII | ACRYGT | 1 cut(s) | 2176 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 12 |
| AhlI | ACTAGT | 1 cut(s) | 272 |
| AjnI | CCWGG | 7 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1744 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 355, 387 |
| Alw21I | GWGCWC | 5 cut(s) | 184, 833, 1018, 1636, 2407 |
| Alw26I | GTCTC | 5 cut(s) | 120, 483, 816, 885, 2440 |
| Alw44I | GTGCAC | 2 cut(s) | 180, 1632 |
| AlwI | GGATC | 5 cut(s) | 311, 1047, 1409, 2052, 2817 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 35, 1271 |
| Ama87I | CYCGRG | 1 cut(s) | 1796 |
| AoxI | GGCC | 9 cut(s) | 210, 725, 929, 1471, 1577, 1742, 1819, 2065, 2608 |
| ApaLI | GTGCAC | 2 cut(s) | 180, 1632 |
| ApeKI | GCWGC | 9 cut(s) | 144, 581, 749, 1070, 1133, 1381, 2291, 2573, 2794 |
| ApoI | RAATTY | 7 cut(s) | 1064, 1168, 1585, 1782, 1862, 2070, 2528 |
| AseI | ATTAAT | 3 cut(s) | 216, 1973, 2721 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 950, 1336 |
| Asp718I | GGTACC | 1 cut(s) | 670 |
| AspA2I | CCTAGG | 1 cut(s) | 722 |
| AspS9I | GGNCC | 7 cut(s) | 440, 726, 1577, 1604, 2416, 2609, 2650 |
| AsuC2I | CCSGG | 1 cut(s) | 1581 |
| AsuHPI | GGTGA | 5 cut(s) | 624, 1040, 1332, 1662, 2579 |
| AvaI | CYCGRG | 1 cut(s) | 1796 |
| AvaII | GGWCC | 4 cut(s) | 440, 1604, 2416, 2650 |
| AvrII | CCTAGG | 1 cut(s) | 722 |
| AxyI | CCTNAGG | 1 cut(s) | 675 |
| BaeGI | GKGCMC | 3 cut(s) | 184, 1636, 1752 |
| BalI | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| BamHI | GGATCC | 1 cut(s) | 2822 |
| BanI | GGYRCC | 2 cut(s) | 670, 1749 |
| BanII | GRGCYC | 3 cut(s) | 203, 1018, 2737 |
| BauI | CACGAG | 2 cut(s) | 500, 1141 |
| BbsI | GAAGAC | 1 cut(s) | 1760 |
| Bbv12I | GWGCWC | 5 cut(s) | 184, 833, 1018, 1636, 2407 |
| BbvCI | CCTCAGC | 1 cut(s) | 2031 |
| BbvI | GCAGC | 9 cut(s) | 156, 593, 761, 1082, 1145, 1393, 2303, 2560, 2806 |
| BccI | CCATC | 3 cut(s) | 1734, 2165, 2612 |
| BceAI | ACGGC | 1 cut(s) | 1429 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 789, 823 |
| BciT130I | CCWGG | 7 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1746 |
| BciVI | GTATCC | 1 cut(s) | 1671 |
| BclI | TGATCA | 2 cut(s) | 520, 1873 |
| BcnI | CCSGG | 1 cut(s) | 1581 |
| BcoDI | GTCTC | 5 cut(s) | 120, 483, 816, 885, 2440 |
| BcuI | ACTAGT | 1 cut(s) | 272 |
| BfaI | CTAG | 5 cut(s) | 264, 273, 723, 1494, 1536 |
| BfmI | CTRYAG | 4 cut(s) | 636, 1915, 2087, 2574 |
| BfuAI | ACCTGC | 1 cut(s) | 839 |
| BfuI | GTATCC | 1 cut(s) | 1671 |
| BglII | AGATCT | 1 cut(s) | 2385 |
| BlnI | CCTAGG | 1 cut(s) | 722 |
| BlpI | GCTNAGC | 1 cut(s) | 2516 |
| Bme1390I | CCNGG | 8 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1581, 1746 |
| Bme18I | GGWCC | 4 cut(s) | 440, 1604, 2416, 2650 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 12 |
| BmeT110I | CYCGRG | 1 cut(s) | 1796 |
| BmgT120I | GGNCC | 7 cut(s) | 440, 726, 1577, 1604, 2416, 2609, 2650 |
| BmiI | GGNNCC | 6 cut(s) | 52, 441, 442, 672, 1751, 2824 |
| BmrFI | CCNGG | 8 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1581, 1746 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmsI | GCATC | 8 cut(s) | 86, 835, 1066, 1499, 1644, 2247, 2314, 2543 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BpiI | GAAGAC | 1 cut(s) | 1760 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1938, 1970 |
| BpmI | CTGGAG | 5 cut(s) | 465, 591, 1076, 1248, 2360 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2031, 2412 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2516 |
| BpuEI | CTTGAG | 2 cut(s) | 643, 993 |
| BpuMI | CCSGG | 1 cut(s) | 1581 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1044 |
| BsaHI | GRCGYC | 1 cut(s) | 400 |
| BsaI | GGTCTC | 1 cut(s) | 120 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 820, 850 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 193, 437, 1247, 1571, 1643, 2618 |
| Bse118I | RCCGGY | 2 cut(s) | 64, 1084 |
| Bse21I | CCTNAGG | 1 cut(s) | 675 |
| Bse3DI | GCAATG | 3 cut(s) | 467, 670, 2369 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1044 |
| BseBI | CCWGG | 7 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1746 |
| BseJI | GATNNNNATC | 1 cut(s) | 1044 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 193, 437, 1247, 1571, 1643, 2618 |
| BseMI | GCAATG | 3 cut(s) | 467, 670, 2369 |
| BseMII | CTCAG | 8 cut(s) | 113, 288, 666, 1010, 1143, 2045, 2426, 2507 |
| BseRI | GAGGAG | 5 cut(s) | 119, 314, 692, 996, 1814 |
| BseSI | GKGCMC | 3 cut(s) | 184, 1636, 1752 |
| BseXI | GCAGC | 9 cut(s) | 156, 593, 761, 1082, 1145, 1393, 2303, 2560, 2806 |
| BseYI | CCCAGC | 3 cut(s) | 231, 935, 2439 |
| BsgI | GTGCAG | 3 cut(s) | 768, 1006, 2693 |
| BshFI | GGCC | 9 cut(s) | 212, 727, 931, 1473, 1579, 1744, 1821, 2067, 2610 |
| BshNI | GGYRCC | 2 cut(s) | 670, 1749 |
| BsiHKAI | GWGCWC | 5 cut(s) | 184, 833, 1018, 1636, 2407 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1796 |
| BsiSI | CCGG | 3 cut(s) | 65, 1085, 1580 |
| BslFI | GGGAC | 1 cut(s) | 453 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 193, 437, 1247, 1571, 1643, 2618 |
| BsmAI | GTCTC | 5 cut(s) | 120, 483, 816, 885, 2440 |
| BsmBI | CGTCTC | 1 cut(s) | 816 |
| BsmFI | GGGAC | 1 cut(s) | 453 |
| BsnI | GGCC | 9 cut(s) | 212, 727, 931, 1473, 1579, 1744, 1821, 2067, 2610 |
| Bso31I | GGTCTC | 1 cut(s) | 120 |
| BsoBI | CYCGRG | 1 cut(s) | 1796 |
| Bsp1286I | GDGCHC | 8 cut(s) | 184, 203, 833, 1018, 1636, 1752, 2407, 2737 |
| Bsp1407I | TGTACA | 4 cut(s) | 2158, 2348, 2509, 2693 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2516 |
| Bsp19I | CCATGG | 1 cut(s) | 2278 |
| BspACI | CCGC | 4 cut(s) | 932, 1328, 1533, 1822 |
| BspANI | GGCC | 9 cut(s) | 212, 727, 931, 1473, 1579, 1744, 1821, 2067, 2610 |
| BspCNI | CTCAG | 8 cut(s) | 114, 289, 667, 1009, 1142, 2044, 2425, 2508 |
| BspHI | TCATGA | 2 cut(s) | 1771, 2467 |
| BspLI | GGNNCC | 6 cut(s) | 52, 441, 442, 672, 1751, 2824 |
| BspMAI | CTGCAG | 2 cut(s) | 2091, 2578 |
| BspMI | ACCTGC | 1 cut(s) | 839 |
| BspPI | GGATC | 5 cut(s) | 311, 1047, 1409, 2052, 2817 |
| BspT107I | GGYRCC | 2 cut(s) | 670, 1749 |
| BspTNI | GGTCTC | 1 cut(s) | 120 |
| BsrDI | GCAATG | 3 cut(s) | 467, 670, 2369 |
| BsrFI | RCCGGY | 2 cut(s) | 64, 1084 |
| BsrGI | TGTACA | 4 cut(s) | 2158, 2348, 2509, 2693 |
| BssAI | RCCGGY | 2 cut(s) | 64, 1084 |
| BssNI | GRCGYC | 1 cut(s) | 400 |
| BssSI | CACGAG | 2 cut(s) | 500, 1141 |
| BssT1I | CCWWGG | 2 cut(s) | 722, 2278 |
| Bst2BI | CACGAG | 2 cut(s) | 500, 1141 |
| Bst2UI | CCWGG | 7 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1746 |
| Bst4CI | ACNGT | 8 cut(s) | 341, 455, 760, 927, 1297, 1916, 2589, 2702 |
| Bst6I | CTCTTC | 2 cut(s) | 501, 1920 |
| BstACI | GRCGYC | 1 cut(s) | 400 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 74, 1076 |
| BstAUI | TGTACA | 4 cut(s) | 2158, 2348, 2509, 2693 |
| BstC8I | GCNNGC | 5 cut(s) | 66, 409, 1618, 2403, 2522 |
| BstDSI | CCRYGG | 1 cut(s) | 2278 |
| BstMAI | GTCTC | 5 cut(s) | 120, 483, 816, 885, 2440 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 74, 329, 1076, 1130, 1487, 1821, 2521 |
| BstNI | CCWGG | 7 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1746 |
| BstNSI | RCATGY | 4 cut(s) | 901, 1964, 2180, 2447 |
| BstSCI | CCNGG | 8 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1579, 1744 |
| BstSFI | CTRYAG | 4 cut(s) | 636, 1915, 2087, 2574 |
| BstSLI | GKGCMC | 3 cut(s) | 184, 1636, 1752 |
| BstV1I | GCAGC | 9 cut(s) | 156, 593, 761, 1082, 1145, 1393, 2303, 2560, 2806 |
| BstV2I | GAAGAC | 1 cut(s) | 1760 |
| BstX2I | RGATCY | 4 cut(s) | 316, 2044, 2385, 2822 |
| BstYI | RGATCY | 4 cut(s) | 316, 2044, 2385, 2822 |
| Bsu36I | CCTNAGG | 1 cut(s) | 675 |
| BsuI | GTATCC | 1 cut(s) | 1671 |
| BsuRI | GGCC | 9 cut(s) | 212, 727, 931, 1473, 1579, 1744, 1821, 2067, 2610 |
| BtgI | CCRYGG | 1 cut(s) | 2278 |
| BtsI | GCAGTG | 1 cut(s) | 1018 |
| BtsIMutI | CAGTG | 5 cut(s) | 460, 765, 831, 932, 1018 |
| BveI | ACCTGC | 1 cut(s) | 839 |
| Cac8I | GCNNGC | 5 cut(s) | 66, 409, 1618, 2403, 2522 |
| CaiI | CAGNNNCTG | 2 cut(s) | 35, 1271 |
| CciI | TCATGA | 2 cut(s) | 1771, 2467 |
| Cfr10I | RCCGGY | 2 cut(s) | 64, 1084 |
| Cfr13I | GGNCC | 7 cut(s) | 440, 726, 1577, 1604, 2416, 2609, 2650 |
| CseI | GACGC | 1 cut(s) | 2579 |
| Csp6I | GTAC | 7 cut(s) | 671, 923, 1088, 2159, 2349, 2510, 2694 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 154, 189, 908, 943 |
| CviQI | GTAC | 7 cut(s) | 671, 923, 1088, 2159, 2349, 2510, 2694 |
| DraI | TTTAAA | 1 cut(s) | 1221 |
| DriI | GACNNNNNGTC | 1 cut(s) | 12 |
| EaeI | YGGCCR | 4 cut(s) | 210, 929, 1471, 1742 |
| Eam1104I | CTCTTC | 2 cut(s) | 501, 1920 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 12 |
| EarI | CTCTTC | 2 cut(s) | 501, 1920 |
| Ecl136II | GAGCTC | 1 cut(s) | 1016 |
| Eco130I | CCWWGG | 2 cut(s) | 722, 2278 |
| Eco24I | GRGCYC | 3 cut(s) | 203, 1018, 2737 |
| Eco31I | GGTCTC | 1 cut(s) | 120 |
| Eco32I | GATATC | 3 cut(s) | 228, 1256, 1843 |
| Eco47I | GGWCC | 4 cut(s) | 440, 1604, 2416, 2650 |
| Eco53kI | GAGCTC | 1 cut(s) | 1016 |
| Eco81I | CCTNAGG | 1 cut(s) | 675 |
| Eco88I | CYCGRG | 1 cut(s) | 1796 |
| EcoICRI | GAGCTC | 1 cut(s) | 1016 |
| EcoO109I | RGGNCCY | 1 cut(s) | 440 |
| EcoRII | CCWGG | 7 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1744 |
| EcoRV | GATATC | 3 cut(s) | 228, 1256, 1843 |
| EcoT14I | CCWWGG | 2 cut(s) | 722, 2278 |
| EcoT22I | ATGCAT | 1 cut(s) | 2307 |
| EcoT38I | GRGCYC | 3 cut(s) | 203, 1018, 2737 |
| ErhI | CCWWGG | 2 cut(s) | 722, 2278 |
| Esp3I | CGTCTC | 1 cut(s) | 816 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 355, 387, 2139, 2171 |
| FaqI | GGGAC | 1 cut(s) | 453 |
| FauI | CCCGC | 1 cut(s) | 1321 |
| FauNDI | CATATG | 4 cut(s) | 474, 1243, 1375, 1459 |
| FbaI | TGATCA | 2 cut(s) | 520, 1873 |
| FblI | GTMKAC | 1 cut(s) | 626 |
| FriOI | GRGCYC | 3 cut(s) | 203, 1018, 2737 |
| FspBI | CTAG | 5 cut(s) | 264, 273, 723, 1494, 1536 |
| GsaI | CCCAGC | 3 cut(s) | 235, 939, 2443 |
| GsuI | CTGGAG | 5 cut(s) | 465, 591, 1076, 1248, 2360 |
| HaeIII | GGCC | 9 cut(s) | 212, 727, 931, 1473, 1579, 1744, 1821, 2067, 2610 |
| HapII | CCGG | 3 cut(s) | 65, 1085, 1580 |
| HgaI | GACGC | 1 cut(s) | 2579 |
| Hin1I | GRCGYC | 1 cut(s) | 400 |
| HincII | GTYRAC | 1 cut(s) | 2705 |
| HindII | GTYRAC | 1 cut(s) | 2705 |
| HindIII | AAGCTT | 2 cut(s) | 256, 1306 |
| HpaII | CCGG | 3 cut(s) | 65, 1085, 1580 |
| HphI | GGTGA | 5 cut(s) | 624, 1040, 1332, 1662, 2579 |
| Hpy166II | GTNNAC | 4 cut(s) | 182, 627, 1634, 2705 |
| Hpy8I | GTNNAC | 4 cut(s) | 182, 627, 1634, 2705 |
| Hpy99I | CGWCG | 2 cut(s) | 402, 811 |
| HpyAV | CCTTC | 5 cut(s) | 381, 1924, 2035, 2641, 2671 |
| HpyCH4III | ACNGT | 8 cut(s) | 341, 455, 760, 927, 1297, 1916, 2589, 2702 |
| HpyCH4IV | ACGT | 2 cut(s) | 400, 745 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 74, 329, 1076, 1130, 1487, 1821, 2521 |
| HpySE526I | ACGT | 2 cut(s) | 400, 745 |
| Hsp92I | GRCGYC | 1 cut(s) | 400 |
| KflI | GGGWCCC | 1 cut(s) | 440 |
| KpnI | GGTACC | 1 cut(s) | 674 |
| KroI | GCCGGC | 1 cut(s) | 64 |
| KroNI | GCCGGC | 1 cut(s) | 66 |
| Ksp22I | TGATCA | 2 cut(s) | 520, 1873 |
| LmnI | GCTCC | 5 cut(s) | 301, 828, 1013, 1486, 2341 |
| Lsp1109I | GCAGC | 9 cut(s) | 156, 593, 761, 1082, 1145, 1393, 2303, 2560, 2806 |
| LweI | GCATC | 8 cut(s) | 86, 835, 1066, 1499, 1644, 2247, 2314, 2543 |
| MaeI | CTAG | 5 cut(s) | 264, 273, 723, 1494, 1536 |
| MaeII | ACGT | 2 cut(s) | 400, 745 |
| MaeIII | GTNAC | 3 cut(s) | 1991, 2195, 2567 |
| MboII | GAAGA | 8 cut(s) | 518, 623, 752, 1728, 1760, 1937, 2764, 2819 |
| MfeI | CAATTG | 1 cut(s) | 587 |
| MflI | RGATCY | 4 cut(s) | 316, 2044, 2385, 2822 |
| MhlI | GDGCHC | 8 cut(s) | 184, 203, 833, 1018, 1636, 1752, 2407, 2737 |
| MlsI | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| MluNI | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| MlyI | GAGTC | 8 cut(s) | 22, 233, 302, 518, 1463, 1774, 1894, 2387 |
| MmeI | TCCRAC | 3 cut(s) | 1582, 1887, 2148 |
| Mox20I | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| Mph1103I | ATGCAT | 1 cut(s) | 2307 |
| MroNI | GCCGGC | 1 cut(s) | 64 |
| MroXI | GAANNNNTTC | 2 cut(s) | 950, 1336 |
| MscI | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2310, 2742 |
| Msp20I | TGGCCA | 3 cut(s) | 212, 1473, 1744 |
| MspA1I | CMGCKG | 2 cut(s) | 752, 2515 |
| MspI | CCGG | 3 cut(s) | 65, 1085, 1580 |
| MspR9I | CCNGG | 8 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1581, 1746 |
| MunI | CAATTG | 1 cut(s) | 587 |
| MvaI | CCWGG | 7 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1746 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 74, 329, 1076, 1130, 1487, 1821, 2521 |
| NaeI | GCCGGC | 1 cut(s) | 66 |
| NciI | CCSGG | 1 cut(s) | 1581 |
| NcoI | CCATGG | 1 cut(s) | 2278 |
| NdeI | CATATG | 4 cut(s) | 474, 1243, 1375, 1459 |
| NgoMIV | GCCGGC | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 6 cut(s) | 52, 441, 442, 672, 1751, 2824 |
| NmeAIII | GCCGAG | 1 cut(s) | 2345 |
| NmuCI | GTSAC | 2 cut(s) | 2195, 2567 |
| NsiI | ATGCAT | 1 cut(s) | 2307 |
| NspI | RCATGY | 4 cut(s) | 901, 1964, 2180, 2447 |
| PaeR7I | CTCGAG | 1 cut(s) | 1796 |
| PagI | TCATGA | 2 cut(s) | 1771, 2467 |
| PaqCI | CACCTGC | 1 cut(s) | 839 |
| PciI | ACATGT | 1 cut(s) | 2176 |
| PdiI | GCCGGC | 1 cut(s) | 66 |
| PdmI | GAANNNNTTC | 2 cut(s) | 950, 1336 |
| PfeI | GAWTC | 6 cut(s) | 358, 394, 614, 866, 916, 2002 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1247, 1643 |
| PfoI | TCCNGGA | 1 cut(s) | 481 |
| PleI | GAGTC | 8 cut(s) | 21, 233, 301, 517, 1462, 1773, 1893, 2387 |
| PpsI | GAGTC | 8 cut(s) | 21, 233, 301, 517, 1462, 1773, 1893, 2387 |
| PpuMI | RGGWCCY | 1 cut(s) | 440 |
| PscI | ACATGT | 1 cut(s) | 2176 |
| PshBI | ATTAAT | 3 cut(s) | 216, 1973, 2721 |
| PsiI | TTATAA | 2 cut(s) | 1788, 2264 |
| Psp124BI | GAGCTC | 1 cut(s) | 1018 |
| Psp5II | RGGWCCY | 1 cut(s) | 440 |
| Psp6I | CCWGG | 7 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1744 |
| PspFI | CCCAGC | 3 cut(s) | 231, 935, 2439 |
| PspGI | CCWGG | 7 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1744 |
| PspN4I | GGNNCC | 6 cut(s) | 52, 441, 442, 672, 1751, 2824 |
| PspPI | GGNCC | 7 cut(s) | 440, 726, 1577, 1604, 2416, 2609, 2650 |
| PspPPI | RGGWCCY | 1 cut(s) | 440 |
| PstI | CTGCAG | 2 cut(s) | 2091, 2578 |
| PstNI | CAGNNNCTG | 2 cut(s) | 35, 1271 |
| PsuI | RGATCY | 4 cut(s) | 316, 2044, 2385, 2822 |
| PvuII | CAGCTG | 2 cut(s) | 752, 2515 |
| RsaI | GTAC | 7 cut(s) | 672, 924, 1089, 2160, 2350, 2511, 2695 |
| RsaNI | GTAC | 7 cut(s) | 671, 923, 1088, 2159, 2349, 2510, 2694 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2310, 2742 |
| SacI | GAGCTC | 1 cut(s) | 1018 |
| Sau96I | GGNCC | 7 cut(s) | 440, 726, 1577, 1604, 2416, 2609, 2650 |
| SchI | GAGTC | 8 cut(s) | 22, 233, 302, 518, 1463, 1774, 1894, 2387 |
| ScrFI | CCNGG | 8 cut(s) | 483, 826, 1230, 1266, 1344, 1386, 1581, 1746 |
| SduI | GDGCHC | 8 cut(s) | 184, 203, 833, 1018, 1636, 1752, 2407, 2737 |
| SfaNI | GCATC | 8 cut(s) | 86, 835, 1066, 1499, 1644, 2247, 2314, 2543 |
| SfcI | CTRYAG | 4 cut(s) | 636, 1915, 2087, 2574 |
| Sfr274I | CTCGAG | 1 cut(s) | 1796 |
| SinI | GGWCC | 4 cut(s) | 440, 1604, 2416, 2650 |
| SlaI | CTCGAG | 1 cut(s) | 1796 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2310, 2742 |
| SmlI | CTYRAG | 3 cut(s) | 658, 1008, 1796 |
| SmoI | CTYRAG | 3 cut(s) | 658, 1008, 1796 |
| SpeI | ACTAGT | 1 cut(s) | 272 |
| SsiI | CCGC | 4 cut(s) | 932, 1328, 1533, 1822 |
| SspMI | CTAG | 5 cut(s) | 264, 273, 723, 1494, 1536 |
| SstI | GAGCTC | 1 cut(s) | 1018 |
| StyD4I | CCNGG | 8 cut(s) | 481, 824, 1228, 1264, 1342, 1384, 1579, 1744 |
| StyI | CCWWGG | 2 cut(s) | 722, 2278 |
| TaaI | ACNGT | 8 cut(s) | 341, 455, 760, 927, 1297, 1916, 2589, 2702 |
| TaiI | ACGT | 2 cut(s) | 403, 748 |
| TaqI | TCGA | 6 cut(s) | 169, 397, 1318, 1797, 1888, 2785 |
| TatI | WGTACW | 5 cut(s) | 922, 2158, 2348, 2509, 2693 |
| TauI | GCSGC | 3 cut(s) | 934, 1535, 1824 |
| TfiI | GAWTC | 6 cut(s) | 358, 394, 614, 866, 916, 2002 |
| TscAI | CASTG | 5 cut(s) | 460, 765, 838, 932, 1025 |
| TseFI | GTSAC | 2 cut(s) | 2195, 2567 |
| TseI | GCWGC | 9 cut(s) | 144, 581, 749, 1070, 1133, 1381, 2291, 2573, 2794 |
| Tsp45I | GTSAC | 2 cut(s) | 2195, 2567 |
| TspDTI | ATGAA | 9 cut(s) | 128, 456, 624, 753, 792, 890, 1760, 2484, 2660 |
| TspGWI | ACGGA | 1 cut(s) | 1146 |
| TspRI | CASTG | 5 cut(s) | 460, 765, 838, 932, 1025 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1247, 1643 |
| VneI | GTGCAC | 2 cut(s) | 180, 1632 |
| VpaK11BI | GGWCC | 4 cut(s) | 440, 1604, 2416, 2650 |
| VspI | ATTAAT | 3 cut(s) | 216, 1973, 2721 |
| XapI | RAATTY | 7 cut(s) | 1064, 1168, 1585, 1782, 1862, 2070, 2528 |
| XbaI | TCTAGA | 1 cut(s) | 1493 |
| XceI | RCATGY | 4 cut(s) | 901, 1964, 2180, 2447 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 239 |
| XhoI | CTCGAG | 1 cut(s) | 1796 |
| XmaJI | CCTAGG | 1 cut(s) | 722 |
| XmiI | GTMKAC | 1 cut(s) | 626 |
| XmnI | GAANNNNTTC | 2 cut(s) | 950, 1336 |
| XspI | CTAG | 5 cut(s) | 264, 273, 723, 1494, 1536 |
| ZraI | GACGTC | 1 cut(s) | 401 |
| Zsp2I | ATGCAT | 1 cut(s) | 2307 |