Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 192 |
| AciI | CCGC | 2 cut(s) | 116, 242 |
| AcsI | RAATTY | 2 cut(s) | 60, 254 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 56, 141, 347 |
| AflIII | ACRYGT | 1 cut(s) | 190 |
| AgsI | TTSAA | 2 cut(s) | 254, 289 |
| AluBI | AGCT | 2 cut(s) | 27, 375 |
| AluI | AGCT | 2 cut(s) | 27, 375 |
| Ama87I | CYCGRG | 1 cut(s) | 364 |
| ApoI | RAATTY | 2 cut(s) | 60, 254 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 14, 46 |
| AsuHPI | GGTGA | 1 cut(s) | 130 |
| AvaI | CYCGRG | 1 cut(s) | 364 |
| AxyI | CCTNAGG | 1 cut(s) | 139 |
| BccI | CCATC | 2 cut(s) | 295, 341 |
| BceAI | ACGGC | 1 cut(s) | 201 |
| BfaI | CTAG | 3 cut(s) | 42, 65, 95 |
| BmeT110I | CYCGRG | 1 cut(s) | 364 |
| BmiI | GGNNCC | 2 cut(s) | 48, 133 |
| BmsI | GCATC | 2 cut(s) | 341, 346 |
| BsaJI | CCNNGG | 1 cut(s) | 264 |
| BsaWI | WCCGGW | 1 cut(s) | 340 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 56, 141, 347 |
| Bse1I | ACTGG | 2 cut(s) | 61, 167 |
| Bse21I | CCTNAGG | 1 cut(s) | 139 |
| BseDI | CCNNGG | 1 cut(s) | 264 |
| BseGI | GGATG | 2 cut(s) | 337, 356 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 56, 141, 347 |
| BseNI | ACTGG | 2 cut(s) | 61, 167 |
| BseYI | CCCAGC | 1 cut(s) | 305 |
| Bsh1236I | CGCG | 1 cut(s) | 192 |
| BsiHKCI | CYCGRG | 1 cut(s) | 364 |
| BsiSI | CCGG | 1 cut(s) | 341 |
| BslFI | GGGAC | 1 cut(s) | 196 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 56, 141, 347 |
| BsmFI | GGGAC | 1 cut(s) | 196 |
| BsoBI | CYCGRG | 1 cut(s) | 364 |
| BspACI | CCGC | 2 cut(s) | 116, 242 |
| BspFNI | CGCG | 1 cut(s) | 192 |
| BspLI | GGNNCC | 2 cut(s) | 48, 133 |
| BsrI | ACTGG | 2 cut(s) | 61, 167 |
| BssECI | CCNNGG | 1 cut(s) | 264 |
| Bst4CI | ACNGT | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 190 |
| BstDEI | CTNAG | 1 cut(s) | 139 |
| BstF5I | GGATG | 2 cut(s) | 337, 356 |
| BstFNI | CGCG | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 163, 360 |
| BstUI | CGCG | 1 cut(s) | 192 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 174 |
| Bsu36I | CCTNAGG | 1 cut(s) | 139 |
| BtsCI | GGATG | 2 cut(s) | 337, 356 |
| BtsIMutI | CAGTG | 2 cut(s) | 54, 174 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 190 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 81, 116 |
| CviJI | RGCY | 5 cut(s) | 27, 166, 305, 363, 375 |
| CviKI_1 | RGCY | 5 cut(s) | 27, 166, 305, 363, 375 |
| DdeI | CTNAG | 1 cut(s) | 139 |
| Eco81I | CCTNAGG | 1 cut(s) | 139 |
| Eco88I | CYCGRG | 1 cut(s) | 364 |
| EcoRI | GAATTC | 1 cut(s) | 60 |
| EcoT22I | ATGCAT | 1 cut(s) | 356 |
| FaiI | YATR | 4 cut(s) | 212, 235, 294, 322 |
| FaqI | GGGAC | 1 cut(s) | 196 |
| FokI | GGATG | 2 cut(s) | 324, 363 |
| FspBI | CTAG | 3 cut(s) | 42, 65, 95 |
| GsaI | CCCAGC | 1 cut(s) | 309 |
| HapII | CCGG | 1 cut(s) | 341 |
| HinfI | GANTC | 1 cut(s) | 199 |
| HpaII | CCGG | 1 cut(s) | 341 |
| HphI | GGTGA | 1 cut(s) | 130 |
| Hpy188I | TCNGA | 3 cut(s) | 51, 198, 265 |
| HpyAV | CCTTC | 1 cut(s) | 139 |
| HpyCH4III | ACNGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 2 cut(s) | 8, 354 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 163, 360 |
| HpyF3I | CTNAG | 1 cut(s) | 139 |
| LmnI | GCTCC | 1 cut(s) | 334 |
| LpnPI | CCDG | 6 cut(s) | 42, 143, 180, 234, 291, 354 |
| LweI | GCATC | 2 cut(s) | 341, 346 |
| MaeI | CTAG | 3 cut(s) | 42, 65, 95 |
| MaeIII | GTNAC | 1 cut(s) | 37 |
| MboII | GAAGA | 2 cut(s) | 26, 310 |
| MluCI | AATT | 2 cut(s) | 60, 254 |
| MluI | ACGCGT | 1 cut(s) | 190 |
| MmeI | TCCRAC | 2 cut(s) | 74, 312 |
| MnlI | CCTC | 4 cut(s) | 259, 265, 271, 360 |
| Mph1103I | ATGCAT | 1 cut(s) | 356 |
| MspA1I | CMGCKG | 1 cut(s) | 244 |
| MspI | CCGG | 1 cut(s) | 341 |
| MvnI | CGCG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 163, 360 |
| NlaIV | GGNNCC | 2 cut(s) | 48, 133 |
| NsiI | ATGCAT | 1 cut(s) | 356 |
| PaeR7I | CTCGAG | 1 cut(s) | 364 |
| PfeI | GAWTC | 1 cut(s) | 199 |
| PspFI | CCCAGC | 1 cut(s) | 305 |
| PspN4I | GGNNCC | 2 cut(s) | 48, 133 |
| PspXI | VCTCGAGB | 1 cut(s) | 364 |
| SetI | ASST | 7 cut(s) | 29, 140, 150, 263, 270, 377, 398 |
| SfaNI | GCATC | 2 cut(s) | 341, 346 |
| Sfr274I | CTCGAG | 1 cut(s) | 364 |
| SlaI | CTCGAG | 1 cut(s) | 364 |
| SmlI | CTYRAG | 1 cut(s) | 364 |
| SmoI | CTYRAG | 1 cut(s) | 364 |
| Sse9I | AATT | 2 cut(s) | 60, 254 |
| SsiI | CCGC | 2 cut(s) | 116, 242 |
| SspMI | CTAG | 3 cut(s) | 42, 65, 95 |
| TaaI | ACNGT | 1 cut(s) | 280 |
| TaqI | TCGA | 3 cut(s) | 108, 202, 365 |
| TasI | AATT | 2 cut(s) | 60, 254 |
| TfiI | GAWTC | 1 cut(s) | 199 |
| TscAI | CASTG | 2 cut(s) | 61, 174 |
| TspRI | CASTG | 2 cut(s) | 61, 174 |
| XapI | RAATTY | 2 cut(s) | 60, 254 |
| XhoI | CTCGAG | 1 cut(s) | 364 |
| XspI | CTAG | 3 cut(s) | 42, 65, 95 |
| Zsp2I | ATGCAT | 1 cut(s) | 356 |