C1 domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AtTam38 | PF25114 | 81 - 346 | 5.2e-137 | AtTam38 family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 888 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 436 |
| AccBSI | CCGCTC | 1 cut(s) | 289 |
| AccII | CGCG | 2 cut(s) | 540, 812 |
| AciI | CCGC | 2 cut(s) | 289, 812 |
| AclWI | GGATC | 1 cut(s) | 482 |
| AcoI | YGGCCR | 1 cut(s) | 879 |
| AcsI | RAATTY | 2 cut(s) | 157, 984 |
| AcuI | CTGAAG | 1 cut(s) | 591 |
| AfaI | GTAC | 2 cut(s) | 277, 299 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 436, 962 |
| AgsI | TTSAA | 4 cut(s) | 120, 139, 200, 451 |
| AjnI | CCWGG | 1 cut(s) | 163 |
| Alw21I | GWGCWC | 1 cut(s) | 418 |
| Alw44I | GTGCAC | 1 cut(s) | 414 |
| AlwI | GGATC | 1 cut(s) | 482 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 632 |
| AoxI | GGCC | 3 cut(s) | 335, 354, 879 |
| ApaLI | GTGCAC | 1 cut(s) | 414 |
| ApeKI | GCWGC | 3 cut(s) | 824, 968, 995 |
| ApoI | RAATTY | 2 cut(s) | 157, 984 |
| AspLEI | GCGC | 3 cut(s) | 542, 812, 968 |
| AsuHPI | GGTGA | 2 cut(s) | 70, 497 |
| AsuII | TTCGAA | 1 cut(s) | 896 |
| BaeGI | GKGCMC | 1 cut(s) | 418 |
| BalI | TGGCCA | 1 cut(s) | 881 |
| Bbv12I | GWGCWC | 1 cut(s) | 418 |
| BbvCI | CCTCAGC | 1 cut(s) | 252 |
| BbvI | GCAGC | 3 cut(s) | 811, 980, 982 |
| BccI | CCATC | 3 cut(s) | 26, 230, 500 |
| BciT130I | CCWGG | 1 cut(s) | 165 |
| BciVI | GTATCC | 2 cut(s) | 434, 1004 |
| BfaI | CTAG | 1 cut(s) | 743 |
| BfmI | CTRYAG | 1 cut(s) | 588 |
| BfuI | GTATCC | 2 cut(s) | 434, 1004 |
| BisI | GCNGC | 4 cut(s) | 813, 825, 969, 996 |
| BlpI | GCTNAGC | 1 cut(s) | 455 |
| BlsI | GCNGC | 4 cut(s) | 814, 826, 970, 997 |
| BmcAI | AGTACT | 1 cut(s) | 277 |
| Bme1390I | CCNGG | 1 cut(s) | 165 |
| BmrFI | CCNGG | 1 cut(s) | 165 |
| BmsI | GCATC | 1 cut(s) | 1027 |
| BpmI | CTGGAG | 1 cut(s) | 702 |
| Bpu10I | CCTNAGC | 2 cut(s) | 252, 973 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 455 |
| Bpu14I | TTCGAA | 1 cut(s) | 896 |
| BsaJI | CCNNGG | 3 cut(s) | 164, 338, 839 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 436, 962 |
| Bse118I | RCCGGY | 1 cut(s) | 1014 |
| Bse1I | ACTGG | 2 cut(s) | 407, 423 |
| Bse3DI | GCAATG | 2 cut(s) | 800, 950 |
| BseBI | CCWGG | 1 cut(s) | 165 |
| BseDI | CCNNGG | 3 cut(s) | 164, 338, 839 |
| BseGI | GGATG | 3 cut(s) | 18, 241, 790 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 436, 962 |
| BseMI | GCAATG | 2 cut(s) | 800, 950 |
| BseMII | CTCAG | 4 cut(s) | 61, 243, 660, 732 |
| BseNI | ACTGG | 2 cut(s) | 407, 423 |
| BseRI | GAGGAG | 3 cut(s) | 16, 63, 269 |
| BseSI | GKGCMC | 1 cut(s) | 418 |
| BseXI | GCAGC | 3 cut(s) | 811, 980, 982 |
| Bsh1236I | CGCG | 2 cut(s) | 540, 812 |
| BshFI | GGCC | 3 cut(s) | 337, 356, 881 |
| BsiHKAI | GWGCWC | 1 cut(s) | 418 |
| BsiSI | CCGG | 2 cut(s) | 284, 1015 |
| BslFI | GGGAC | 1 cut(s) | 448 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 436, 962 |
| BsmFI | GGGAC | 1 cut(s) | 448 |
| BsnI | GGCC | 3 cut(s) | 337, 356, 881 |
| Bsp119I | TTCGAA | 1 cut(s) | 896 |
| Bsp1286I | GDGCHC | 1 cut(s) | 418 |
| Bsp143I | GATC | 2 cut(s) | 487, 504 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 455 |
| BspACI | CCGC | 2 cut(s) | 289, 812 |
| BspANI | GGCC | 3 cut(s) | 337, 356, 881 |
| BspCNI | CTCAG | 4 cut(s) | 60, 244, 659, 731 |
| BspFNI | CGCG | 2 cut(s) | 540, 812 |
| BspPI | GGATC | 1 cut(s) | 482 |
| BspQI | GCTCTTC | 1 cut(s) | 121 |
| BspT104I | TTCGAA | 1 cut(s) | 896 |
| BsrBI | CCGCTC | 1 cut(s) | 289 |
| BsrDI | GCAATG | 2 cut(s) | 800, 950 |
| BsrFI | RCCGGY | 1 cut(s) | 1014 |
| BsrI | ACTGG | 2 cut(s) | 407, 423 |
| BssAI | RCCGGY | 1 cut(s) | 1014 |
| BssECI | CCNNGG | 3 cut(s) | 164, 338, 839 |
| BssMI | GATC | 2 cut(s) | 487, 504 |
| BssT1I | CCWWGG | 1 cut(s) | 338 |
| Bst2UI | CCWGG | 1 cut(s) | 165 |
| Bst4CI | ACNGT | 2 cut(s) | 592, 840 |
| Bst6I | CTCTTC | 1 cut(s) | 121 |
| BstBI | TTCGAA | 1 cut(s) | 896 |
| BstC8I | GCNNGC | 3 cut(s) | 603, 822, 993 |
| BstDEI | CTNAG | 7 cut(s) | 47, 252, 455, 646, 718, 973, 999 |
| BstDSI | CCRYGG | 1 cut(s) | 839 |
| BstF5I | GGATG | 3 cut(s) | 18, 241, 790 |
| BstFNI | CGCG | 2 cut(s) | 540, 812 |
| BstHHI | GCGC | 3 cut(s) | 542, 812, 968 |
| BstKTI | GATC | 2 cut(s) | 490, 507 |
| BstMBI | GATC | 2 cut(s) | 487, 504 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 377, 539, 617, 821, 952, 974, 1004 |
| BstNI | CCWGG | 1 cut(s) | 165 |
| BstSCI | CCNGG | 1 cut(s) | 163 |
| BstSFI | CTRYAG | 1 cut(s) | 588 |
| BstSLI | GKGCMC | 1 cut(s) | 418 |
| BstUI | CGCG | 2 cut(s) | 540, 812 |
| BstV1I | GCAGC | 3 cut(s) | 811, 980, 982 |
| BsuI | GTATCC | 2 cut(s) | 434, 1004 |
| BsuRI | GGCC | 3 cut(s) | 337, 356, 881 |
| BtgI | CCRYGG | 1 cut(s) | 839 |
| BtsCI | GGATG | 3 cut(s) | 18, 241, 790 |
| BtsIMutI | CAGTG | 1 cut(s) | 416 |
| Cac8I | GCNNGC | 3 cut(s) | 603, 822, 993 |
| CaiI | CAGNNNCTG | 1 cut(s) | 632 |
| CfoI | GCGC | 3 cut(s) | 542, 812, 968 |
| Cfr10I | RCCGGY | 1 cut(s) | 1014 |
| Csp6I | GTAC | 2 cut(s) | 276, 298 |
| CviAII | CATG | 3 cut(s) | 372, 598, 1026 |
| CviQI | GTAC | 2 cut(s) | 276, 298 |
| DdeI | CTNAG | 7 cut(s) | 47, 252, 455, 646, 718, 973, 999 |
| DpnI | GATC | 2 cut(s) | 489, 506 |
| DpnII | GATC | 2 cut(s) | 487, 504 |
| EaeI | YGGCCR | 1 cut(s) | 879 |
| Eam1104I | CTCTTC | 1 cut(s) | 121 |
| EarI | CTCTTC | 1 cut(s) | 121 |
| Eco130I | CCWWGG | 1 cut(s) | 338 |
| Eco57I | CTGAAG | 1 cut(s) | 591 |
| EcoRI | GAATTC | 1 cut(s) | 984 |
| EcoRII | CCWGG | 1 cut(s) | 163 |
| EcoT14I | CCWWGG | 1 cut(s) | 338 |
| EcoT22I | ATGCAT | 1 cut(s) | 373 |
| ErhI | CCWWGG | 1 cut(s) | 338 |
| FaeI | CATG | 3 cut(s) | 375, 601, 1029 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 443, 475 |
| FaqI | GGGAC | 1 cut(s) | 448 |
| FatI | CATG | 3 cut(s) | 371, 597, 1025 |
| Fnu4HI | GCNGC | 4 cut(s) | 813, 825, 969, 996 |
| FokI | GGATG | 3 cut(s) | 5, 248, 797 |
| Fsp4HI | GCNGC | 4 cut(s) | 813, 825, 969, 996 |
| FspBI | CTAG | 1 cut(s) | 743 |
| GlaI | GCGC | 3 cut(s) | 541, 811, 967 |
| GluI | GCNGC | 4 cut(s) | 813, 825, 969, 996 |
| GsuI | CTGGAG | 1 cut(s) | 702 |
| HaeIII | GGCC | 3 cut(s) | 337, 356, 881 |
| HapII | CCGG | 2 cut(s) | 284, 1015 |
| HhaI | GCGC | 3 cut(s) | 542, 812, 968 |
| Hin1II | CATG | 3 cut(s) | 375, 601, 1029 |
| Hin6I | GCGC | 3 cut(s) | 540, 810, 966 |
| HinP1I | GCGC | 3 cut(s) | 540, 810, 966 |
| HindIII | AAGCTT | 3 cut(s) | 452, 902, 944 |
| HinfI | GANTC | 2 cut(s) | 510, 739 |
| HpaII | CCGG | 2 cut(s) | 284, 1015 |
| HphI | GGTGA | 2 cut(s) | 70, 497 |
| Hpy166II | GTNNAC | 1 cut(s) | 416 |
| Hpy188I | TCNGA | 3 cut(s) | 50, 509, 721 |
| Hpy188III | TCNNGA | 6 cut(s) | 317, 448, 578, 681, 765, 908 |
| Hpy8I | GTNNAC | 1 cut(s) | 416 |
| HpyAV | CCTTC | 1 cut(s) | 367 |
| HpyCH4III | ACNGT | 2 cut(s) | 592, 840 |
| HpyCH4IV | ACGT | 1 cut(s) | 674 |
| HpyCH4V | TGCA | 6 cut(s) | 227, 371, 416, 626, 698, 800 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 377, 539, 617, 821, 952, 974, 1004 |
| HpyF3I | CTNAG | 7 cut(s) | 47, 252, 455, 646, 718, 973, 999 |
| HpySE526I | ACGT | 1 cut(s) | 674 |
| Hsp92II | CATG | 3 cut(s) | 375, 601, 1029 |
| HspAI | GCGC | 3 cut(s) | 540, 810, 966 |
| Kzo9I | GATC | 2 cut(s) | 487, 504 |
| LguI | GCTCTTC | 1 cut(s) | 121 |
| LmnI | GCTCC | 3 cut(s) | 286, 319, 574 |
| Lsp1109I | GCAGC | 3 cut(s) | 811, 980, 982 |
| LweI | GCATC | 1 cut(s) | 1027 |
| MaeI | CTAG | 1 cut(s) | 743 |
| MaeII | ACGT | 1 cut(s) | 674 |
| MaeIII | GTNAC | 3 cut(s) | 758, 790, 931 |
| MalI | GATC | 2 cut(s) | 489, 506 |
| MbiI | CCGCTC | 1 cut(s) | 289 |
| MboI | GATC | 2 cut(s) | 487, 504 |
| MboII | GAAGA | 5 cut(s) | 108, 463, 721, 910, 932 |
| MfeI | CAATTG | 1 cut(s) | 183 |
| MhlI | GDGCHC | 1 cut(s) | 418 |
| MlsI | TGGCCA | 1 cut(s) | 881 |
| MluCI | AATT | 8 cut(s) | 157, 183, 392, 431, 573, 581, 709, 984 |
| MluNI | TGGCCA | 1 cut(s) | 881 |
| MmeI | TCCRAC | 1 cut(s) | 811 |
| Mox20I | TGGCCA | 1 cut(s) | 881 |
| Mph1103I | ATGCAT | 1 cut(s) | 373 |
| MscI | TGGCCA | 1 cut(s) | 881 |
| MseI | TTAA | 3 cut(s) | 209, 708, 774 |
| Msp20I | TGGCCA | 1 cut(s) | 881 |
| MspA1I | CMGCKG | 1 cut(s) | 611 |
| MspI | CCGG | 2 cut(s) | 284, 1015 |
| MspR9I | CCNGG | 1 cut(s) | 165 |
| MunI | CAATTG | 1 cut(s) | 183 |
| MvaI | CCWGG | 1 cut(s) | 165 |
| MvnI | CGCG | 2 cut(s) | 540, 812 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 377, 539, 617, 821, 952, 974, 1004 |
| NdeII | GATC | 2 cut(s) | 487, 504 |
| NlaIII | CATG | 3 cut(s) | 375, 601, 1029 |
| NmuCI | GTSAC | 1 cut(s) | 931 |
| NsiI | ATGCAT | 1 cut(s) | 373 |
| NspV | TTCGAA | 1 cut(s) | 896 |
| PciSI | GCTCTTC | 1 cut(s) | 121 |
| PfeI | GAWTC | 2 cut(s) | 510, 739 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 436 |
| PkrI | GCNGC | 4 cut(s) | 814, 826, 970, 997 |
| PsiI | TTATAA | 1 cut(s) | 888 |
| Psp6I | CCWGG | 1 cut(s) | 163 |
| PspGI | CCWGG | 1 cut(s) | 163 |
| PstNI | CAGNNNCTG | 1 cut(s) | 632 |
| PvuII | CAGCTG | 1 cut(s) | 611 |
| RsaI | GTAC | 2 cut(s) | 277, 299 |
| RsaNI | GTAC | 2 cut(s) | 276, 298 |
| SapI | GCTCTTC | 1 cut(s) | 121 |
| SaqAI | TTAA | 3 cut(s) | 209, 708, 774 |
| SatI | GCNGC | 4 cut(s) | 813, 825, 969, 996 |
| Sau3AI | GATC | 2 cut(s) | 487, 504 |
| ScaI | AGTACT | 1 cut(s) | 277 |
| ScrFI | CCNGG | 1 cut(s) | 165 |
| SduI | GDGCHC | 1 cut(s) | 418 |
| SfaNI | GCATC | 1 cut(s) | 1027 |
| SfcI | CTRYAG | 1 cut(s) | 588 |
| SfuI | TTCGAA | 1 cut(s) | 896 |
| Sse9I | AATT | 8 cut(s) | 157, 183, 392, 431, 573, 581, 709, 984 |
| SsiI | CCGC | 2 cut(s) | 289, 812 |
| SspMI | CTAG | 1 cut(s) | 743 |
| StyD4I | CCNGG | 1 cut(s) | 163 |
| StyI | CCWWGG | 1 cut(s) | 338 |
| TaaI | ACNGT | 2 cut(s) | 592, 840 |
| TaiI | ACGT | 1 cut(s) | 677 |
| TaqI | TCGA | 3 cut(s) | 85, 577, 896 |
| TasI | AATT | 8 cut(s) | 157, 183, 392, 431, 573, 581, 709, 984 |
| TatI | WGTACW | 1 cut(s) | 275 |
| TauI | GCSGC | 1 cut(s) | 815 |
| TfiI | GAWTC | 2 cut(s) | 510, 739 |
| Tru1I | TTAA | 3 cut(s) | 209, 708, 774 |
| Tru9I | TTAA | 3 cut(s) | 209, 708, 774 |
| TscAI | CASTG | 1 cut(s) | 423 |
| TseFI | GTSAC | 1 cut(s) | 931 |
| TseI | GCWGC | 3 cut(s) | 824, 968, 995 |
| Tsp45I | GTSAC | 1 cut(s) | 931 |
| TspDTI | ATGAA | 3 cut(s) | 80, 261, 469 |
| TspRI | CASTG | 1 cut(s) | 423 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 436 |
| VneI | GTGCAC | 1 cut(s) | 414 |
| XapI | RAATTY | 2 cut(s) | 157, 984 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 161 |
| XspI | CTAG | 1 cut(s) | 743 |
| ZrmI | AGTACT | 1 cut(s) | 277 |
| Zsp2I | ATGCAT | 1 cut(s) | 373 |