Rmu_sc0005664.1_g000009

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005664.1
OG0000109
Physical Location & Seq
Forward (+)
31101 .. 32228
1128 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005664.1_g000009.1.cds

Sequence Viewer

Length: 1128 bp
atgtttgctttggccgtgtatgatggctgttgtgaggaggagtcagtgcccatcccagcgatcccggtctgggtggaagtgtttggacttcctcctatactgatgaccattaatgctgtctccatgattggtgcgtctctaggtcagatccttcagttggacaaagcgaatatccgtcgtgacttgaaggctagggtttgcatctcccatctgatcacaactccagtgaagcaagcctaccctcccatgctcttcgagttcggtacagggaaggacatggtttctgctagggtgactttccggtatgagaagatggttggtttttgcagggtatgtggcttactggaacatttggaatctggttgcgcagggccgcaggatatgtctggaacttacgtcgtggctggggcgcaccatcaggcagggcgtttggaggtgggtggctctaaccctagggcgaacccgccccctgtgttgggctttgtggggttgggttccacatcggggccgacatctcagactactgcaagatctctgagcagtagcgtggctactcctactgttattcgacccccttctggtttgcttctttctgtacctggtattgcagatgatctagcaaagaaaatggagcctcctcgtccccaagcggcgcttccggtactcccttccccaagtcggcaaccggtggagaaacctctggtcaatgggactaaaaggccggctgaggctagggagttggtgacgtacagtaagaaggcccgagtagtggttcctgttcccatcactgaacaggtgagtattggttttgtccctgagctagctttacctcaccaggcagggatcttgattgtctctcccccaaagaagcgtacggtgggtaggcctttaggggcaaagaataagccccgagtggaagatatttacccctggaagctggggaccgcttcaactaagaaagttaagaagcgtcaatttcatactgctaagaaagctctggttatggaggaagataaggtagtatgggaggttcctgcggggaaggctgttgtggaggagattgctccaatggcaacaattaattctaagaagaccacggtggcggagaagaccacggtggcggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

375

Amino Acids

40.16

Weight (kDa)

9.53

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 367
AciI CCGC 7 cut(s) 374, 464, 650, 945, 1037, 1103, 1121
AclWI GGATC 3 cut(s) 55, 142, 851
AcoI YGGCCR 1 cut(s) 12
AcuI CTGAAG 1 cut(s) 137
AfaI GTAC 5 cut(s) 265, 597, 663, 749, 874
AfiI CCNNNNNNNGG 8 cut(s) 70, 157, 475, 476, 504, 578, 678, 769
AgeI ACCGGT 1 cut(s) 685
AgsI TTSAA 2 cut(s) 187, 951
AjnI CCWGG 3 cut(s) 598, 834, 929
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
AluBI AGCT 4 cut(s) 820, 824, 937, 995
AluI AGCT 4 cut(s) 820, 824, 937, 995
Alw26I GTCTC 3 cut(s) 124, 141, 859
AlwI GGATC 3 cut(s) 55, 142, 851
Ama87I CYCGRG 2 cut(s) 762, 909
AoxI GGCC 6 cut(s) 12, 371, 506, 719, 759, 884
AseI ATTAAT 2 cut(s) 111, 1080
AsiGI ACCGGT 1 cut(s) 685
AspA2I CCTAGG 1 cut(s) 452
AspLEI GCGC 3 cut(s) 368, 412, 655
AspS9I GGNCC 4 cut(s) 371, 506, 760, 942
AsuC2I CCSGG 1 cut(s) 65
AsuHPI GGTGA 4 cut(s) 304, 754, 808, 824
AsuNHI GCTAGC 1 cut(s) 820
AvaI CYCGRG 2 cut(s) 762, 909
AvaII GGWCC 1 cut(s) 942
AvrII CCTAGG 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 51
BarI GAAGNNNNNNTAC 2 cut(s) 221, 253
BbsI GAAGAC 2 cut(s) 1097, 1115
BbvCI CCTCAGC 1 cut(s) 726
BccI CCATC 6 cut(s) 17, 59, 216, 307, 423, 791
BciT130I CCWGG 3 cut(s) 600, 836, 931
BclI TGATCA 1 cut(s) 213
BcnI CCSGG 1 cut(s) 65
BcoDI GTCTC 3 cut(s) 124, 141, 859
BfaI CTAG 7 cut(s) 140, 192, 288, 453, 617, 732, 821
BfoI RGCGCY 1 cut(s) 656
BglII AGATCT 1 cut(s) 530
BisI GCNGC 2 cut(s) 374, 651
BlnI CCTAGG 1 cut(s) 452
BlsI GCNGC 2 cut(s) 375, 652
Bme1390I CCNGG 4 cut(s) 65, 600, 836, 931
Bme18I GGWCC 1 cut(s) 942
BmeT110I CYCGRG 2 cut(s) 762, 909
BmgT120I GGNCC 4 cut(s) 371, 506, 760, 942
BmiI GGNNCC 6 cut(s) 496, 507, 633, 774, 943, 1032
BmrFI CCNGG 4 cut(s) 65, 600, 836, 931
BmsI GCATC 1 cut(s) 210
BmtI GCTAGC 1 cut(s) 824
BpiI GAAGAC 2 cut(s) 1097, 1115
BpmI CTGGAG 1 cut(s) 207
Bpu10I CCTNAGC 2 cut(s) 726, 816
BpuMI CCSGG 1 cut(s) 65
BsaJI CCNNGG 4 cut(s) 452, 929, 1095, 1113
BsaWI WCCGGW 3 cut(s) 300, 658, 685
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 157, 475, 476, 504, 578, 678, 769
Bse118I RCCGGY 2 cut(s) 685, 721
Bse1I ACTGG 2 cut(s) 224, 348
BseBI CCWGG 3 cut(s) 600, 836, 931
BseDI CCNNGG 4 cut(s) 452, 929, 1095, 1113
BseGI GGATG 1 cut(s) 51
BseLI CCNNNNNNNGG 8 cut(s) 70, 157, 475, 476, 504, 578, 678, 769
BseMII CTCAG 4 cut(s) 527, 530, 717, 807
BseNI ACTGG 2 cut(s) 224, 348
BseRI GAGGAG 4 cut(s) 50, 53, 627, 1070
BseSI GKGCMC 1 cut(s) 51
BseYI CCCAGC 3 cut(s) 55, 404, 937
BshFI GGCC 6 cut(s) 14, 373, 508, 721, 761, 886
BshTI ACCGGT 1 cut(s) 685
BsiHKCI CYCGRG 2 cut(s) 762, 909
BsiSI CCGG 5 cut(s) 65, 301, 659, 686, 722
BsiWI CGTACG 1 cut(s) 872
BslFI GGGAC 4 cut(s) 627, 724, 797, 955
BslI CCNNNNNNNGG 8 cut(s) 70, 157, 475, 476, 504, 578, 678, 769
BsmAI GTCTC 3 cut(s) 124, 141, 859
BsmBI CGTCTC 1 cut(s) 141
BsmFI GGGAC 4 cut(s) 627, 724, 797, 955
BsnI GGCC 6 cut(s) 14, 373, 508, 721, 761, 886
BsoBI CYCGRG 2 cut(s) 762, 909
Bsp1286I GDGCHC 1 cut(s) 51
Bsp143I GATC 6 cut(s) 60, 147, 213, 530, 613, 843
BspACI CCGC 7 cut(s) 374, 464, 650, 945, 1037, 1103, 1121
BspANI GGCC 6 cut(s) 14, 373, 508, 721, 761, 886
BspCNI CTCAG 4 cut(s) 528, 529, 718, 808
BspLI GGNNCC 6 cut(s) 496, 507, 633, 774, 943, 1032
BspOI GCTAGC 1 cut(s) 824
BspPI GGATC 3 cut(s) 55, 142, 851
BspQI GCTCTTC 1 cut(s) 257
BsrFI RCCGGY 2 cut(s) 685, 721
BsrI ACTGG 2 cut(s) 224, 348
BssAI RCCGGY 2 cut(s) 685, 721
BssECI CCNNGG 4 cut(s) 452, 929, 1095, 1113
BssMI GATC 6 cut(s) 60, 147, 213, 530, 613, 843
BssT1I CCWWGG 1 cut(s) 452
Bst2UI CCWGG 3 cut(s) 600, 836, 931
Bst4CI ACNGT 5 cut(s) 562, 752, 877, 1099, 1117
Bst6I CTCTTC 1 cut(s) 257
BstC8I GCNNGC 3 cut(s) 234, 723, 822
BstDEI CTNAG 7 cut(s) 516, 536, 726, 816, 954, 987, 1086
BstDSI CCRYGG 2 cut(s) 1095, 1113
BstF5I GGATG 1 cut(s) 51
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 3 cut(s) 368, 412, 655
BstKTI GATC 6 cut(s) 63, 150, 216, 533, 616, 846
BstMAI GTCTC 3 cut(s) 124, 141, 859
BstMBI GATC 6 cut(s) 60, 147, 213, 530, 613, 843
BstMWI GCNNNNNNNGC 3 cut(s) 992, 1043, 1070
BstNI CCWGG 3 cut(s) 600, 836, 931
BstSCI CCNGG 4 cut(s) 63, 598, 834, 929
BstSLI GKGCMC 1 cut(s) 51
BstV2I GAAGAC 2 cut(s) 1097, 1115
BstX2I RGATCY 3 cut(s) 147, 530, 843
BstYI RGATCY 3 cut(s) 147, 530, 843
BsuRI GGCC 6 cut(s) 14, 373, 508, 721, 761, 886
BtgI CCRYGG 2 cut(s) 1095, 1113
BtsCI GGATG 1 cut(s) 51
BtsIMutI CAGTG 3 cut(s) 51, 231, 786
Cac8I GCNNGC 3 cut(s) 234, 723, 822
CfoI GCGC 3 cut(s) 368, 412, 655
Cfr10I RCCGGY 2 cut(s) 685, 721
Cfr13I GGNCC 4 cut(s) 371, 506, 760, 942
CseI GACGC 2 cut(s) 123, 959
CsiI ACCWGGT 1 cut(s) 598
Csp6I GTAC 5 cut(s) 264, 596, 662, 748, 873
CspAI ACCGGT 1 cut(s) 685
CviAII CATG 3 cut(s) 124, 247, 277
CviQI GTAC 5 cut(s) 264, 596, 662, 748, 873
DdeI CTNAG 7 cut(s) 516, 536, 726, 816, 954, 987, 1086
DpnI GATC 6 cut(s) 62, 149, 215, 532, 615, 845
DpnII GATC 6 cut(s) 60, 147, 213, 530, 613, 843
EaeI YGGCCR 1 cut(s) 12
Eam1104I CTCTTC 1 cut(s) 257
EarI CTCTTC 1 cut(s) 257
EciI GGCGGA 1 cut(s) 1118
Eco130I CCWWGG 1 cut(s) 452
Eco147I AGGCCT 1 cut(s) 886
Eco47I GGWCC 1 cut(s) 942
Eco57I CTGAAG 1 cut(s) 137
Eco88I CYCGRG 2 cut(s) 762, 909
EcoRII CCWGG 3 cut(s) 598, 834, 929
EcoT14I CCWWGG 1 cut(s) 452
ErhI CCWWGG 1 cut(s) 452
Esp3I CGTCTC 1 cut(s) 141
FaeI CATG 3 cut(s) 127, 250, 280
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 4 cut(s) 627, 724, 797, 955
FatI CATG 3 cut(s) 123, 246, 276
FauI CCCGC 2 cut(s) 471, 1030
FbaI TGATCA 1 cut(s) 213
Fnu4HI GCNGC 2 cut(s) 374, 651
FokI GGATG 1 cut(s) 38
Fsp4HI GCNGC 2 cut(s) 374, 651
FspBI CTAG 7 cut(s) 140, 192, 288, 453, 617, 732, 821
FspI TGCGCA 1 cut(s) 367
GlaI GCGC 3 cut(s) 367, 411, 654
GluI GCNGC 2 cut(s) 374, 651
GsaI CCCAGC 3 cut(s) 59, 408, 941
GsuI CTGGAG 1 cut(s) 207
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 6 cut(s) 14, 373, 508, 721, 761, 886
HapII CCGG 5 cut(s) 65, 301, 659, 686, 722
HgaI GACGC 2 cut(s) 123, 959
HhaI GCGC 3 cut(s) 368, 412, 655
Hin1II CATG 3 cut(s) 127, 250, 280
Hin6I GCGC 3 cut(s) 366, 410, 653
HinP1I GCGC 3 cut(s) 366, 410, 653
HinfI GANTC 2 cut(s) 41, 356
HpaII CCGG 5 cut(s) 65, 301, 659, 686, 722
HphI GGTGA 4 cut(s) 304, 754, 808, 824
Hpy188I TCNGA 4 cut(s) 147, 213, 519, 537
Hpy188III TCNNGA 3 cut(s) 179, 387, 847
Hpy99I CGWCG 2 cut(s) 180, 401
HpyAV CCTTC 7 cut(s) 161, 181, 265, 585, 678, 751, 1036
HpyCH4III ACNGT 5 cut(s) 562, 752, 877, 1099, 1117
HpyCH4IV ACGT 2 cut(s) 396, 746
HpyCH4V TGCA 4 cut(s) 201, 327, 527, 608
HpyF10VI GCNNNNNNNGC 3 cut(s) 992, 1043, 1070
HpyF3I CTNAG 7 cut(s) 516, 536, 726, 816, 954, 987, 1086
HpySE526I ACGT 2 cut(s) 396, 746
Hsp92II CATG 3 cut(s) 127, 250, 280
HspAI GCGC 3 cut(s) 366, 410, 653
KroI GCCGGC 1 cut(s) 721
KroNI GCCGGC 1 cut(s) 723
Ksp22I TGATCA 1 cut(s) 213
Kzo9I GATC 6 cut(s) 60, 147, 213, 530, 613, 843
LguI GCTCTTC 1 cut(s) 257
LmnI GCTCC 2 cut(s) 631, 1069
LweI GCATC 1 cut(s) 210
MabI ACCWGGT 1 cut(s) 598
MaeI CTAG 7 cut(s) 140, 192, 288, 453, 617, 732, 821
MaeII ACGT 2 cut(s) 396, 746
MaeIII GTNAC 3 cut(s) 179, 292, 742
MalI GATC 6 cut(s) 62, 149, 215, 532, 615, 845
MboI GATC 6 cut(s) 60, 147, 213, 530, 613, 843
MboII GAAGA 6 cut(s) 244, 322, 929, 1022, 1102, 1120
MflI RGATCY 3 cut(s) 147, 530, 843
MhlI GDGCHC 1 cut(s) 51
MluCI AATT 3 cut(s) 974, 1077, 1081
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 1 cut(s) 138
MroNI GCCGGC 1 cut(s) 721
MseI TTAA 3 cut(s) 111, 963, 1080
MspI CCGG 5 cut(s) 65, 301, 659, 686, 722
MspR9I CCNGG 4 cut(s) 65, 600, 836, 931
MvaI CCWGG 3 cut(s) 600, 836, 931
MwoI GCNNNNNNNGC 3 cut(s) 992, 1043, 1070
NaeI GCCGGC 1 cut(s) 723
NciI CCSGG 1 cut(s) 65
NdeII GATC 6 cut(s) 60, 147, 213, 530, 613, 843
NgoMIV GCCGGC 1 cut(s) 721
NheI GCTAGC 1 cut(s) 820
NlaIII CATG 3 cut(s) 127, 250, 280
NlaIV GGNNCC 6 cut(s) 496, 507, 633, 774, 943, 1032
NmuCI GTSAC 3 cut(s) 179, 292, 742
NsbI TGCGCA 1 cut(s) 367
PceI AGGCCT 1 cut(s) 886
PciSI GCTCTTC 1 cut(s) 257
PdiI GCCGGC 1 cut(s) 723
PfeI GAWTC 1 cut(s) 356
Pfl23II CGTACG 1 cut(s) 872
PinAI ACCGGT 1 cut(s) 685
PkrI GCNGC 2 cut(s) 375, 652
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
PshBI ATTAAT 2 cut(s) 111, 1080
Psp6I CCWGG 3 cut(s) 598, 834, 929
PspFI CCCAGC 3 cut(s) 55, 404, 937
PspGI CCWGG 3 cut(s) 598, 834, 929
PspLI CGTACG 1 cut(s) 872
PspN4I GGNNCC 6 cut(s) 496, 507, 633, 774, 943, 1032
PspPI GGNCC 4 cut(s) 371, 506, 760, 942
PsrI GAACNNNNNNTAC 2 cut(s) 1014, 1046
PsuI RGATCY 3 cut(s) 147, 530, 843
RsaI GTAC 5 cut(s) 265, 597, 663, 749, 874
RsaNI GTAC 5 cut(s) 264, 596, 662, 748, 873
SapI GCTCTTC 1 cut(s) 257
SaqAI TTAA 3 cut(s) 111, 963, 1080
SatI GCNGC 2 cut(s) 374, 651
Sau3AI GATC 6 cut(s) 60, 147, 213, 530, 613, 843
Sau96I GGNCC 4 cut(s) 371, 506, 760, 942
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 4 cut(s) 65, 600, 836, 931
SduI GDGCHC 1 cut(s) 51
SexAI ACCWGGT 1 cut(s) 598
SfaNI GCATC 1 cut(s) 210
SinI GGWCC 1 cut(s) 942
Sse9I AATT 3 cut(s) 974, 1077, 1081
SseBI AGGCCT 1 cut(s) 886
SsiI CCGC 7 cut(s) 374, 464, 650, 945, 1037, 1103, 1121
SspMI CTAG 7 cut(s) 140, 192, 288, 453, 617, 732, 821
StuI AGGCCT 1 cut(s) 886
StyD4I CCNGG 4 cut(s) 63, 598, 834, 929
StyI CCWWGG 1 cut(s) 452
TaaI ACNGT 5 cut(s) 562, 752, 877, 1099, 1117
TaiI ACGT 2 cut(s) 399, 749
TaqI TCGA 2 cut(s) 255, 568
TasI AATT 3 cut(s) 974, 1077, 1081
TauI GCSGC 2 cut(s) 376, 653
TfiI GAWTC 1 cut(s) 356
Tru1I TTAA 3 cut(s) 111, 963, 1080
Tru9I TTAA 3 cut(s) 111, 963, 1080
TscAI CASTG 3 cut(s) 51, 231, 793
TseFI GTSAC 3 cut(s) 179, 292, 742
Tsp45I GTSAC 3 cut(s) 179, 292, 742
TspDTI ATGAA 1 cut(s) 968
TspGWI ACGGA 1 cut(s) 164
TspRI CASTG 3 cut(s) 51, 231, 793
VpaK11BI GGWCC 1 cut(s) 942
VspI ATTAAT 2 cut(s) 111, 1080
XmaJI CCTAGG 1 cut(s) 452
XspI CTAG 7 cut(s) 140, 192, 288, 453, 617, 732, 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.