Rmu_sc0001354.1_g000009

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001354.1
OG0000109
Physical Location & Seq
Reverse (-)
26369 .. 27694
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001354.1_g000009.1.cds

Sequence Viewer

Length: 1326 bp
atggttgatcacgttaccgctcgtctggcagccgcattggcgatctctgaagatggccggacatcctttggtccggctggtgctgctgctgtatcttctcagcacttcgcggtggggagactgctctccgttacggccaagcgtcgggctgatcctaaggctttcttggggactatgacctccttgtgggggcttggcaatcgtctctctgcacgagcagtcaaggaccgatttgtctttcagttttctaaaccagaggaccgtcaaaggacggttgagggagggccgtggttttttggaaagtgggcgctggctatgactgagttcgatggtttgaaagatccgacgcaagtgtcgatctcttcttttccagtatgggtggagattatgggtctaccgccgaccctagttactgagggcgctgtggctctcattggcgctaccttaggggaaatcgtgcatctggataaagctgggattcataagggtacgacgactagggttcgtatccgtcatgttctgtcgtctccggtgaaacaagttttccttccatccacctttgatttcacctctggggcatctgcgacggtcaggttccgctatgagaggctcgttggattctgccgggtttgtggtatgatggaacatcagcggtcgggttgcggtggcactccggaagctctgcaggtctccgttggtgctaaccctaaccctagcttggtggggtctgcagctccgagtcttgcggaggttttggctcagtccacagcgcctaatctatttacctccgtggcaaagtcgacttcactacagggtttctcggtcgccgctctggtggcccaactggccaaaatctcatctccggttcaaggggccagtgcgcccatgcaaactgctgtagtggtcccatctctcagtgggaagaagagaacggcctcttcggcccttatgcaatattccaagcgtaagaagacaattgagaaggctcctcaggtggaggacgttgaccttggttttgaacctgaattggctctgaagagtaagaacggggttctcttagtttctcaggcaaagaaggctaaaatgggacgtcctcctgggcgcaagaacaatccaaaacctgtgggtttgcctaagaagctgatttctgaggatccaaaacctcgaaggaagagaagttttaaggcagtggacaatccttcctctggtgaaggcagctcgggtttggctgcacaaacactcacccttactgatagggaggttcacatgtcttctggaaaaggttctgagcctgaggaacgcactcccatgggtgccctcgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

441

Amino Acids

46.77

Weight (kDa)

10.05

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 233, 352
AatII GACGTC 1 cut(s) 1093
Acc36I ACCTGC 1 cut(s) 676
AccB1I GGYRCC 1 cut(s) 1313
AccBSI CCGCTC 2 cut(s) 20, 830
AccI GTMKAC 2 cut(s) 394, 800
AccII CGCG 1 cut(s) 110
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 9 cut(s) 18, 33, 110, 398, 598, 652, 663, 746, 828
AclWI GGATC 4 cut(s) 146, 335, 1148, 1161
AcoI YGGCCR 3 cut(s) 55, 135, 846
AcuI CTGAAG 2 cut(s) 69, 1055
AcyI GRCGYC 1 cut(s) 1090
AfaI GTAC 1 cut(s) 490
AfiI CCNNNNNNNGG 6 cut(s) 144, 186, 189, 718, 869, 1205
AflIII ACRYGT 1 cut(s) 1266
AgsI TTSAA 3 cut(s) 337, 869, 1019
AjnI CCWGG 1 cut(s) 1096
AluBI AGCT 6 cut(s) 473, 680, 717, 734, 1141, 1218
AluI AGCT 6 cut(s) 473, 680, 717, 734, 1141, 1218
Alw26I GTCTC 4 cut(s) 112, 209, 531, 694
AlwI GGATC 4 cut(s) 146, 335, 1148, 1161
Ama87I CYCGRG 1 cut(s) 1219
Aor13HI TCCGGA 1 cut(s) 673
AoxI GGCC 8 cut(s) 55, 135, 284, 837, 846, 873, 933, 942
ApeKI GCWGC 6 cut(s) 29, 83, 86, 731, 1215, 1229
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
Asp700I GAANNNNTTC 1 cut(s) 1282
AspLEI GCGC 6 cut(s) 310, 422, 440, 772, 883, 1104
AspS9I GGNCC 8 cut(s) 71, 226, 259, 284, 838, 873, 904, 943
AsuC2I CCSGG 1 cut(s) 626
AsuHPI GGTGA 4 cut(s) 544, 559, 1220, 1234
AvaI CYCGRG 1 cut(s) 1219
AvaII GGWCC 4 cut(s) 71, 226, 259, 904
AxyI CCTNAGG 4 cut(s) 156, 445, 990, 1293
BaeGI GKGCMC 1 cut(s) 1318
BalI TGGCCA 1 cut(s) 848
BamHI GGATCC 1 cut(s) 1153
BanI GGYRCC 1 cut(s) 1313
BauI CACGAG 1 cut(s) 213
BbsI GAAGAC 2 cut(s) 977, 1263
BbvI GCAGC 6 cut(s) 41, 70, 73, 743, 1216, 1227
BccI CCATC 5 cut(s) 47, 323, 559, 634, 916
BceAI ACGGC 3 cut(s) 150, 271, 948
BciT130I CCWGG 1 cut(s) 1098
BciVI GTATCC 1 cut(s) 518
BclI TGATCA 1 cut(s) 7
BcnI CCSGG 1 cut(s) 626
BcoDI GTCTC 4 cut(s) 112, 209, 531, 694
BfaI CTAG 3 cut(s) 407, 498, 714
BfmI CTRYAG 4 cut(s) 683, 729, 809, 897
BfoI RGCGCY 4 cut(s) 311, 423, 441, 773
BfuAI ACCTGC 1 cut(s) 676
BfuI GTATCC 1 cut(s) 518
BglI GCCNNNNNGGC 3 cut(s) 38, 845, 941
BisI GCNGC 8 cut(s) 30, 33, 84, 87, 732, 828, 1216, 1230
BlsI GCNGC 8 cut(s) 31, 34, 85, 88, 733, 829, 1217, 1231
Bme1390I CCNGG 2 cut(s) 626, 1098
Bme18I GGWCC 4 cut(s) 71, 226, 259, 904
BmeT110I CYCGRG 1 cut(s) 1219
BmgT120I GGNCC 8 cut(s) 71, 226, 259, 284, 838, 873, 904, 943
BmiI GGNNCC 6 cut(s) 596, 874, 906, 987, 1155, 1315
BmrFI CCNGG 2 cut(s) 626, 1098
BmsI GCATC 2 cut(s) 469, 587
BpiI GAAGAC 2 cut(s) 977, 1263
BpuMI CCSGG 1 cut(s) 626
BsaHI GRCGYC 1 cut(s) 1090
BsaI GGTCTC 1 cut(s) 694
BsaJI CCNNGG 5 cut(s) 287, 789, 1009, 1097, 1308
BsaWI WCCGGW 3 cut(s) 529, 673, 862
Bsc4I CCNNNNNNNGG 6 cut(s) 144, 186, 189, 718, 869, 1205
Bse1I ACTGG 3 cut(s) 371, 849, 876
Bse21I CCTNAGG 4 cut(s) 156, 445, 990, 1293
BseAI TCCGGA 1 cut(s) 673
BseBI CCWGG 1 cut(s) 1098
BseDI CCNNGG 5 cut(s) 287, 789, 1009, 1097, 1308
BseGI GGATG 2 cut(s) 62, 551
BseLI CCNNNNNNNGG 6 cut(s) 144, 186, 189, 718, 869, 1205
BseNI ACTGG 3 cut(s) 371, 849, 876
BseRI GAGGAG 1 cut(s) 978
BseSI GKGCMC 1 cut(s) 1318
BseXI GCAGC 6 cut(s) 41, 70, 73, 743, 1216, 1227
BseYI CCCAGC 1 cut(s) 473
BsgI GTGCAG 2 cut(s) 195, 1215
Bsh1236I CGCG 1 cut(s) 110
Bsh1285I CGRYCG 2 cut(s) 656, 825
BshFI GGCC 8 cut(s) 57, 137, 286, 839, 848, 875, 935, 944
BshNI GGYRCC 1 cut(s) 1313
BsiEI CGRYCG 2 cut(s) 656, 825
BsiHKCI CYCGRG 1 cut(s) 1219
BsiSI CCGG 6 cut(s) 58, 74, 530, 625, 674, 863
BslFI GGGAC 3 cut(s) 184, 890, 1101
BslI CCNNNNNNNGG 6 cut(s) 144, 186, 189, 718, 869, 1205
BsmAI GTCTC 4 cut(s) 112, 209, 531, 694
BsmBI CGTCTC 2 cut(s) 209, 531
BsmFI GGGAC 3 cut(s) 184, 890, 1101
BsnI GGCC 8 cut(s) 57, 137, 286, 839, 848, 875, 935, 944
Bso31I GGTCTC 1 cut(s) 694
BsoBI CYCGRG 1 cut(s) 1219
Bsp1286I GDGCHC 1 cut(s) 1318
Bsp13I TCCGGA 1 cut(s) 673
Bsp143I GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
Bsp19I CCATGG 1 cut(s) 1308
BspACI CCGC 9 cut(s) 18, 33, 110, 398, 598, 652, 663, 746, 828
BspANI GGCC 8 cut(s) 57, 137, 286, 839, 848, 875, 935, 944
BspEI TCCGGA 1 cut(s) 673
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 6 cut(s) 596, 874, 906, 987, 1155, 1315
BspMAI CTGCAG 2 cut(s) 687, 733
BspMI ACCTGC 1 cut(s) 676
BspPI GGATC 4 cut(s) 146, 335, 1148, 1161
BspT107I GGYRCC 1 cut(s) 1313
BspTNI GGTCTC 1 cut(s) 694
BsrBI CCGCTC 2 cut(s) 20, 830
BsrI ACTGG 3 cut(s) 371, 849, 876
BssECI CCNNGG 5 cut(s) 287, 789, 1009, 1097, 1308
BssMI GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
BssNI GRCGYC 1 cut(s) 1090
BssSI CACGAG 1 cut(s) 213
BssT1I CCWWGG 2 cut(s) 1009, 1308
Bst2BI CACGAG 1 cut(s) 213
Bst2UI CCWGG 1 cut(s) 1098
Bst4CI ACNGT 3 cut(s) 263, 274, 589
Bst6I CTCTTC 5 cut(s) 367, 920, 943, 1031, 1166
BstACI GRCGYC 1 cut(s) 1090
BstC8I GCNNGC 1 cut(s) 312
BstDSI CCRYGG 3 cut(s) 287, 789, 1308
BstF5I GGATG 2 cut(s) 62, 551
BstFNI CGCG 1 cut(s) 110
BstH2I RGCGCY 4 cut(s) 311, 423, 441, 773
BstHHI GCGC 6 cut(s) 310, 422, 440, 772, 883, 1104
BstKTI GATC 6 cut(s) 10, 45, 154, 343, 360, 1156
BstMAI GTCTC 4 cut(s) 112, 209, 531, 694
BstMBI GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
BstMCI CGRYCG 2 cut(s) 656, 825
BstMWI GCNNNNNNNGC 8 cut(s) 26, 38, 83, 836, 845, 941, 1076, 1138
BstNI CCWGG 1 cut(s) 1098
BstNSI RCATGY 1 cut(s) 1270
BstSCI CCNGG 2 cut(s) 624, 1096
BstSFI CTRYAG 4 cut(s) 683, 729, 809, 897
BstSLI GKGCMC 1 cut(s) 1318
BstUI CGCG 1 cut(s) 110
BstV1I GCAGC 6 cut(s) 41, 70, 73, 743, 1216, 1227
BstV2I GAAGAC 2 cut(s) 977, 1263
BstX2I RGATCY 2 cut(s) 340, 1153
BstYI RGATCY 2 cut(s) 340, 1153
Bsu36I CCTNAGG 4 cut(s) 156, 445, 990, 1293
BsuI GTATCC 1 cut(s) 518
BsuRI GGCC 8 cut(s) 57, 137, 286, 839, 848, 875, 935, 944
BtgI CCRYGG 3 cut(s) 287, 789, 1308
BtsCI GGATG 2 cut(s) 62, 551
BtsI GCAGTG 1 cut(s) 1194
BtsIMutI CAGTG 3 cut(s) 883, 922, 1194
BveI ACCTGC 1 cut(s) 676
Cac8I GCNNGC 1 cut(s) 312
CfoI GCGC 6 cut(s) 310, 422, 440, 772, 883, 1104
Cfr13I GGNCC 8 cut(s) 71, 226, 259, 284, 838, 873, 904, 943
CseI GACGC 2 cut(s) 131, 355
Csp6I GTAC 1 cut(s) 489
CspCI CAANNNNNGTGG 2 cut(s) 1104, 1139
CviAII CATG 4 cut(s) 515, 886, 1267, 1309
CviQI GTAC 1 cut(s) 489
DpnI GATC 6 cut(s) 9, 44, 153, 342, 359, 1155
DpnII GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
DrdI GACNNNNNNGTC 2 cut(s) 233, 352
DseDI GACNNNNNNGTC 2 cut(s) 233, 352
EaeI YGGCCR 3 cut(s) 55, 135, 846
Eam1104I CTCTTC 5 cut(s) 367, 920, 943, 1031, 1166
EarI CTCTTC 5 cut(s) 367, 920, 943, 1031, 1166
Eco130I CCWWGG 2 cut(s) 1009, 1308
Eco31I GGTCTC 1 cut(s) 694
Eco47I GGWCC 4 cut(s) 71, 226, 259, 904
Eco57I CTGAAG 2 cut(s) 69, 1055
Eco81I CCTNAGG 4 cut(s) 156, 445, 990, 1293
Eco88I CYCGRG 1 cut(s) 1219
EcoRII CCWGG 1 cut(s) 1096
EcoT14I CCWWGG 2 cut(s) 1009, 1308
ErhI CCWWGG 2 cut(s) 1009, 1308
Esp3I CGTCTC 2 cut(s) 209, 531
FaeI CATG 4 cut(s) 518, 889, 1270, 1312
FalI AAGNNNNNCTT 4 cut(s) 149, 181, 531, 563
FaqI GGGAC 3 cut(s) 184, 890, 1101
FatI CATG 4 cut(s) 514, 885, 1266, 1308
FbaI TGATCA 1 cut(s) 7
FblI GTMKAC 2 cut(s) 394, 800
Fnu4HI GCNGC 8 cut(s) 30, 33, 84, 87, 732, 828, 1216, 1230
FokI GGATG 2 cut(s) 49, 538
Fsp4HI GCNGC 8 cut(s) 30, 33, 84, 87, 732, 828, 1216, 1230
FspBI CTAG 3 cut(s) 407, 498, 714
GlaI GCGC 6 cut(s) 309, 421, 439, 771, 882, 1103
GluI GCNGC 8 cut(s) 30, 33, 84, 87, 732, 828, 1216, 1230
GsaI CCCAGC 1 cut(s) 477
HaeII RGCGCY 4 cut(s) 311, 423, 441, 773
HaeIII GGCC 8 cut(s) 57, 137, 286, 839, 848, 875, 935, 944
HapII CCGG 6 cut(s) 58, 74, 530, 625, 674, 863
HgaI GACGC 2 cut(s) 131, 355
HhaI GCGC 6 cut(s) 310, 422, 440, 772, 883, 1104
Hin1I GRCGYC 1 cut(s) 1090
Hin1II CATG 4 cut(s) 518, 889, 1270, 1312
Hin6I GCGC 6 cut(s) 308, 420, 438, 770, 881, 1102
HinP1I GCGC 6 cut(s) 308, 420, 438, 770, 881, 1102
HincII GTYRAC 2 cut(s) 801, 1006
HindII GTYRAC 2 cut(s) 801, 1006
HinfI GANTC 3 cut(s) 478, 618, 739
HpaII CCGG 6 cut(s) 58, 74, 530, 625, 674, 863
HphI GGTGA 4 cut(s) 544, 559, 1220, 1234
Hpy166II GTNNAC 6 cut(s) 395, 765, 801, 1006, 1192, 1264
Hpy188I TCNGA 6 cut(s) 49, 345, 738, 1035, 1150, 1288
Hpy188III TCNNGA 3 cut(s) 464, 674, 1275
Hpy8I GTNNAC 6 cut(s) 395, 765, 801, 1006, 1192, 1264
Hpy99I CGWCG 4 cut(s) 147, 349, 496, 589
HpyAV CCTTC 6 cut(s) 557, 976, 1069, 1161, 1205, 1209
HpyCH4III ACNGT 3 cut(s) 263, 274, 589
HpyCH4IV ACGT 3 cut(s) 12, 1002, 1090
HpyCH4V TGCA 7 cut(s) 212, 460, 685, 731, 889, 952, 1232
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 38, 83, 836, 845, 941, 1076, 1138
HpySE526I ACGT 3 cut(s) 12, 1002, 1090
Hsp92I GRCGYC 1 cut(s) 1090
Hsp92II CATG 4 cut(s) 518, 889, 1270, 1312
HspAI GCGC 6 cut(s) 308, 420, 438, 770, 881, 1102
Kpn2I TCCGGA 1 cut(s) 673
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
LmnI GCTCC 2 cut(s) 739, 991
Lsp1109I GCAGC 6 cut(s) 41, 70, 73, 743, 1216, 1227
LweI GCATC 2 cut(s) 469, 587
MaeI CTAG 3 cut(s) 407, 498, 714
MaeII ACGT 3 cut(s) 12, 1002, 1090
MaeIII GTNAC 3 cut(s) 13, 130, 409
MalI GATC 6 cut(s) 9, 44, 153, 342, 359, 1155
MbiI CCGCTC 2 cut(s) 20, 830
MboI GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
MfeI CAATTG 1 cut(s) 975
MflI RGATCY 2 cut(s) 340, 1153
MhlI GDGCHC 1 cut(s) 1318
MlsI TGGCCA 1 cut(s) 848
MluCI AATT 2 cut(s) 975, 1025
MluNI TGGCCA 1 cut(s) 848
MlyI GAGTC 1 cut(s) 748
MmeI TCCRAC 2 cut(s) 368, 595
Mox20I TGGCCA 1 cut(s) 848
MroI TCCGGA 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 1282
MscI TGGCCA 1 cut(s) 848
MseI TTAA 1 cut(s) 1182
MslI CAYNNNNRTG 1 cut(s) 1307
Msp20I TGGCCA 1 cut(s) 848
MspA1I CMGCKG 1 cut(s) 652
MspI CCGG 6 cut(s) 58, 74, 530, 625, 674, 863
MspR9I CCNGG 2 cut(s) 626, 1098
MunI CAATTG 1 cut(s) 975
MvaI CCWGG 1 cut(s) 1098
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 8 cut(s) 26, 38, 83, 836, 845, 941, 1076, 1138
NciI CCSGG 1 cut(s) 626
NcoI CCATGG 1 cut(s) 1308
NdeII GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
NlaIII CATG 4 cut(s) 518, 889, 1270, 1312
NlaIV GGNNCC 6 cut(s) 596, 874, 906, 987, 1155, 1315
NspI RCATGY 1 cut(s) 1270
PciI ACATGT 1 cut(s) 1266
PcsI WCGNNNNNNNCGW 1 cut(s) 353
PdmI GAANNNNTTC 1 cut(s) 1282
PfeI GAWTC 2 cut(s) 478, 618
PkrI GCNGC 8 cut(s) 31, 34, 85, 88, 733, 829, 1217, 1231
PleI GAGTC 1 cut(s) 747
PpsI GAGTC 1 cut(s) 747
PscI ACATGT 1 cut(s) 1266
Psp6I CCWGG 1 cut(s) 1096
PspFI CCCAGC 1 cut(s) 473
PspGI CCWGG 1 cut(s) 1096
PspN4I GGNNCC 6 cut(s) 596, 874, 906, 987, 1155, 1315
PspPI GGNCC 8 cut(s) 71, 226, 259, 284, 838, 873, 904, 943
PstI CTGCAG 2 cut(s) 687, 733
PsuI RGATCY 2 cut(s) 340, 1153
RsaI GTAC 1 cut(s) 490
RsaNI GTAC 1 cut(s) 489
RseI CAYNNNNRTG 1 cut(s) 1307
SalI GTCGAC 1 cut(s) 799
SaqAI TTAA 1 cut(s) 1182
SatI GCNGC 8 cut(s) 30, 33, 84, 87, 732, 828, 1216, 1230
Sau3AI GATC 6 cut(s) 7, 42, 151, 340, 357, 1153
Sau96I GGNCC 8 cut(s) 71, 226, 259, 284, 838, 873, 904, 943
SchI GAGTC 1 cut(s) 748
ScrFI CCNGG 2 cut(s) 626, 1098
SduI GDGCHC 1 cut(s) 1318
SfaNI GCATC 2 cut(s) 469, 587
SfcI CTRYAG 4 cut(s) 683, 729, 809, 897
SfiI GGCCNNNNNGGCC 2 cut(s) 845, 941
SinI GGWCC 4 cut(s) 71, 226, 259, 904
SmiMI CAYNNNNRTG 1 cut(s) 1307
Sse9I AATT 2 cut(s) 975, 1025
SsiI CCGC 9 cut(s) 18, 33, 110, 398, 598, 652, 663, 746, 828
SspI AATATT 1 cut(s) 956
SspMI CTAG 3 cut(s) 407, 498, 714
StyD4I CCNGG 2 cut(s) 624, 1096
StyI CCWWGG 2 cut(s) 1009, 1308
TaaI ACNGT 3 cut(s) 263, 274, 589
TaiI ACGT 3 cut(s) 15, 1005, 1093
TaqI TCGA 5 cut(s) 327, 356, 800, 1165, 1320
TaqII GACCGA 2 cut(s) 243, 811
TasI AATT 2 cut(s) 975, 1025
TauI GCSGC 2 cut(s) 35, 830
TfiI GAWTC 2 cut(s) 478, 618
Tru1I TTAA 1 cut(s) 1182
Tru9I TTAA 1 cut(s) 1182
TscAI CASTG 3 cut(s) 883, 922, 1194
TseI GCWGC 6 cut(s) 29, 83, 86, 731, 1215, 1229
TspDTI ATGAA 1 cut(s) 470
TspGWI ACGGA 4 cut(s) 118, 500, 682, 778
TspRI CASTG 3 cut(s) 883, 922, 1194
VpaK11BI GGWCC 4 cut(s) 71, 226, 259, 904
XceI RCATGY 1 cut(s) 1270
XmiI GTMKAC 2 cut(s) 394, 800
XmnI GAANNNNTTC 1 cut(s) 1282
XspI CTAG 3 cut(s) 407, 498, 714
ZraI GACGTC 1 cut(s) 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.