Rmu_sc0012355.1_g000002

Domain of unknown function (DUF4283)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012355.1
OG0000109
Physical Location & Seq
Forward (+)
7371 .. 9763
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012355.1_g000002.1.cds

Sequence Viewer

Length: 1533 bp
atgaggatgaaggcaggccaagccaagccacaatcaacgacgacttcgaagatgatgtcaggacccgagattgaggactgtaatctaatttggagagatgtcaagaattccaaccaagatttcggcgatttcaaacgcccaaggattggctggctttgctacctgcttctgcggggttgtgttcctcttgtggcggagtctaccgacatggaggcttctggactggagcttgttcttggagtgggccttggcttcttcgcatcttcttctcttggcatcctcctctcttccaccatgcttgatcacgttaccgctcatctggcagccgcattggcgatctctgaagatgggcggacatcctttggtccggctggtgctgctgctgtgtcttctcagcacttcgcggtggggagactgctctccgttacggccaagtgtcgggctgatcctaaggctttcttggggactatgacctccttgtgggggcttggcaatcgtctctctgcacgagcagtcaaggaccgatttgtctttcagttttctaaaccagaggaccatcaaaggacggttgagggagggccgtggttttttggaaagtgggcgctggctatggctgagttcgatggtttgaaagatccgacgcaagtgtcgatctcttcttttccaatatgggtggagattatgggtctaccgccggccctagttactgagggcactgtggcgctcattggcgctaccttaggggagatcgtgcatctggataaagctgggattcgaaagggtacggcggctagggtttgtatccgtcatgttttgtcgtctccggtgaaacaagttttccttccatccacctttgatttcacctctggggcatctgcgacggtcaggttccgctatgagaggctcgttggattctgtcgggtttatggtatgatggaacatcagcggtcgggttgcggtggccctccggaagcgctgcaggtctccgttggtgctaaccctaaccctagcttggtggggtctgcagctccgagtcttgcggaggtcttggctcagtccatagcgcctaatctatttacctccgtggcaaagtcgacttcactacagggtttctcggtcgctgctctggtggcccaactggccaaaatcccatctccggttcaaggggccagtgcgcccatgcaaactgctgtagtggtcccatctctcagtgggaagaagagaacggcctcttcggccctcatgcaatattccaagcgtaagaagacaattgagaaggctcctcaggtggagggcgttgaccttggttttgaacctgaattggctctgaagagtaagaacggggttctcttagtttctccggaaaagaaggctaaaatgggacgtcctcctgggctggacaatccttcctctggtgaaggcagctcgggtttggctgcagaaacacccacccttactgatagggaggttcacatgtcttctggcaaaggttctgagcctgaggaacgcactcccatgggtgccctcgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_3 zf-CCHC_4

Protein Analysis

510

Amino Acids

53.92

Weight (kDa)

9.06

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 527, 646
AatII GACGTC 1 cut(s) 1387
Acc36I ACCTGC 2 cut(s) 171, 970
AccB1I GGYRCC 1 cut(s) 1520
AccB7I CCANNNNNTGG 1 cut(s) 146
AccBSI CCGCTC 1 cut(s) 314
AccI GTMKAC 3 cut(s) 200, 688, 1094
AccII CGCG 1 cut(s) 404
AccIII TCCGGA 2 cut(s) 967, 1360
AclWI GGATC 2 cut(s) 440, 629
AcoI YGGCCR 2 cut(s) 429, 1140
AcsI RAATTY 1 cut(s) 106
AcuI CTGAAG 2 cut(s) 363, 1349
AcyI GRCGYC 1 cut(s) 1384
AfaI GTAC 1 cut(s) 784
AfeI AGCGCT 1 cut(s) 975
AfiI CCNNNNNNNGG 8 cut(s) 146, 438, 480, 483, 1012, 1156, 1163, 1412
AflIII ACRYGT 1 cut(s) 1473
AgsI TTSAA 4 cut(s) 133, 631, 1163, 1313
AjnI CCWGG 1 cut(s) 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 104, 136
AluBI AGCT 5 cut(s) 229, 767, 1011, 1028, 1425
AluI AGCT 5 cut(s) 229, 767, 1011, 1028, 1425
Alw26I GTCTC 4 cut(s) 406, 503, 825, 988
AlwI GGATC 2 cut(s) 440, 629
Ama87I CYCGRG 2 cut(s) 65, 1426
Aor13HI TCCGGA 2 cut(s) 967, 1360
Aor51HI AGCGCT 1 cut(s) 975
ApeKI GCWGC 8 cut(s) 323, 377, 380, 976, 1025, 1121, 1422, 1436
ApoI RAATTY 1 cut(s) 106
ArsI GACNNNNNNTTYG 4 cut(s) 41, 73, 1292, 1324
AspLEI GCGC 6 cut(s) 604, 724, 734, 976, 1066, 1177
AsuHPI GGTGA 3 cut(s) 838, 853, 1427
AsuII TTCGAA 2 cut(s) 47, 775
AvaI CYCGRG 2 cut(s) 65, 1426
AvaII GGWCC 5 cut(s) 62, 365, 520, 553, 1198
AxyI CCTNAGG 4 cut(s) 450, 739, 1284, 1500
BaeGI GKGCMC 2 cut(s) 716, 1525
BalI TGGCCA 1 cut(s) 1142
BanI GGYRCC 1 cut(s) 1520
BauI CACGAG 1 cut(s) 507
BbsI GAAGAC 3 cut(s) 381, 1271, 1470
BbvI GCAGC 8 cut(s) 335, 364, 367, 963, 1037, 1108, 1423, 1434
BccI CCATC 7 cut(s) 341, 564, 617, 853, 928, 1159, 1210
BceAI ACGGC 4 cut(s) 444, 565, 801, 1242
BciT130I CCWGG 1 cut(s) 1392
BciVI GTATCC 1 cut(s) 812
BclI TGATCA 1 cut(s) 301
BcoDI GTCTC 4 cut(s) 406, 503, 825, 988
BfaI CTAG 3 cut(s) 701, 792, 1008
BfmI CTRYAG 5 cut(s) 977, 1023, 1103, 1191, 1437
BfoI RGCGCY 5 cut(s) 605, 725, 735, 977, 1067
BfuAI ACCTGC 2 cut(s) 171, 970
BfuI GTATCC 1 cut(s) 812
BglI GCCNNNNNGGC 3 cut(s) 332, 1139, 1235
Bme1390I CCNGG 1 cut(s) 1392
Bme18I GGWCC 5 cut(s) 62, 365, 520, 553, 1198
BmeT110I CYCGRG 2 cut(s) 65, 1426
BmiI GGNNCC 6 cut(s) 64, 890, 1168, 1200, 1281, 1522
BmrFI CCNGG 1 cut(s) 1392
BmsI GCATC 4 cut(s) 269, 285, 763, 881
BpiI GAAGAC 3 cut(s) 381, 1271, 1470
BpmI CTGGAG 1 cut(s) 245
Bpu14I TTCGAA 2 cut(s) 47, 775
BsaHI GRCGYC 1 cut(s) 1384
BsaI GGTCTC 1 cut(s) 988
BsaJI CCNNGG 7 cut(s) 140, 247, 581, 1083, 1303, 1391, 1515
BsaWI WCCGGW 4 cut(s) 823, 967, 1156, 1360
Bsc4I CCNNNNNNNGG 8 cut(s) 146, 438, 480, 483, 1012, 1156, 1163, 1412
Bse118I RCCGGY 1 cut(s) 694
Bse1I ACTGG 3 cut(s) 228, 1143, 1170
Bse21I CCTNAGG 4 cut(s) 450, 739, 1284, 1500
BseAI TCCGGA 2 cut(s) 967, 1360
BseBI CCWGG 1 cut(s) 1392
BseDI CCNNGG 7 cut(s) 140, 247, 581, 1083, 1303, 1391, 1515
BseGI GGATG 4 cut(s) 12, 276, 356, 845
BseLI CCNNNNNNNGG 8 cut(s) 146, 438, 480, 483, 1012, 1156, 1163, 1412
BseMII CTCAG 8 cut(s) 407, 606, 699, 1067, 1222, 1298, 1485, 1491
BseNI ACTGG 3 cut(s) 228, 1143, 1170
BseRI GAGGAG 2 cut(s) 272, 1272
BseSI GKGCMC 2 cut(s) 716, 1525
BseXI GCAGC 8 cut(s) 335, 364, 367, 963, 1037, 1108, 1423, 1434
BseYI CCCAGC 1 cut(s) 767
BsgI GTGCAG 1 cut(s) 489
Bsh1236I CGCG 1 cut(s) 404
Bsh1285I CGRYCG 2 cut(s) 950, 1119
BshNI GGYRCC 1 cut(s) 1520
BsiEI CGRYCG 2 cut(s) 950, 1119
BsiHKCI CYCGRG 2 cut(s) 65, 1426
BsiSI CCGG 6 cut(s) 368, 695, 824, 968, 1157, 1361
BslFI GGGAC 3 cut(s) 478, 1184, 1395
BslI CCNNNNNNNGG 8 cut(s) 146, 438, 480, 483, 1012, 1156, 1163, 1412
BsmAI GTCTC 4 cut(s) 406, 503, 825, 988
BsmBI CGTCTC 2 cut(s) 503, 825
BsmFI GGGAC 3 cut(s) 478, 1184, 1395
Bso31I GGTCTC 1 cut(s) 988
BsoBI CYCGRG 2 cut(s) 65, 1426
Bsp119I TTCGAA 2 cut(s) 47, 775
Bsp1286I GDGCHC 2 cut(s) 716, 1525
Bsp13I TCCGGA 2 cut(s) 967, 1360
Bsp143I GATC 6 cut(s) 301, 336, 445, 634, 651, 747
Bsp19I CCATGG 1 cut(s) 1515
BspCNI CTCAG 8 cut(s) 406, 607, 700, 1066, 1221, 1297, 1486, 1492
BspEI TCCGGA 2 cut(s) 967, 1360
BspFNI CGCG 1 cut(s) 404
BspLI GGNNCC 6 cut(s) 64, 890, 1168, 1200, 1281, 1522
BspMAI CTGCAG 3 cut(s) 981, 1027, 1441
BspMI ACCTGC 2 cut(s) 171, 970
BspPI GGATC 2 cut(s) 440, 629
BspT104I TTCGAA 2 cut(s) 47, 775
BspT107I GGYRCC 1 cut(s) 1520
BspTNI GGTCTC 1 cut(s) 988
BsrBI CCGCTC 1 cut(s) 314
BsrFI RCCGGY 1 cut(s) 694
BsrI ACTGG 3 cut(s) 228, 1143, 1170
BssAI RCCGGY 1 cut(s) 694
BssECI CCNNGG 7 cut(s) 140, 247, 581, 1083, 1303, 1391, 1515
BssMI GATC 6 cut(s) 301, 336, 445, 634, 651, 747
BssNI GRCGYC 1 cut(s) 1384
BssSI CACGAG 1 cut(s) 507
BssT1I CCWWGG 4 cut(s) 140, 247, 1303, 1515
Bst2BI CACGAG 1 cut(s) 507
Bst2UI CCWGG 1 cut(s) 1392
Bst4CI ACNGT 4 cut(s) 80, 568, 718, 883
Bst6I CTCTTC 5 cut(s) 292, 661, 1214, 1237, 1325
BstACI GRCGYC 1 cut(s) 1384
BstBI TTCGAA 2 cut(s) 47, 775
BstC8I GCNNGC 4 cut(s) 16, 152, 606, 696
BstDSI CCRYGG 3 cut(s) 581, 1083, 1515
BstF5I GGATG 4 cut(s) 12, 276, 356, 845
BstFNI CGCG 1 cut(s) 404
BstH2I RGCGCY 5 cut(s) 605, 725, 735, 977, 1067
BstHHI GCGC 6 cut(s) 604, 724, 734, 976, 1066, 1177
BstKTI GATC 6 cut(s) 304, 339, 448, 637, 654, 750
BstMAI GTCTC 4 cut(s) 406, 503, 825, 988
BstMBI GATC 6 cut(s) 301, 336, 445, 634, 651, 747
BstMCI CGRYCG 2 cut(s) 950, 1119
BstMWI GCNNNNNNNGC 8 cut(s) 20, 156, 320, 332, 377, 1130, 1139, 1235
BstNI CCWGG 1 cut(s) 1392
BstNSI RCATGY 1 cut(s) 1477
BstSCI CCNGG 1 cut(s) 1390
BstSFI CTRYAG 5 cut(s) 977, 1023, 1103, 1191, 1437
BstSLI GKGCMC 2 cut(s) 716, 1525
BstUI CGCG 1 cut(s) 404
BstV1I GCAGC 8 cut(s) 335, 364, 367, 963, 1037, 1108, 1423, 1434
BstV2I GAAGAC 3 cut(s) 381, 1271, 1470
BstX2I RGATCY 1 cut(s) 634
BstYI RGATCY 1 cut(s) 634
Bsu36I CCTNAGG 4 cut(s) 450, 739, 1284, 1500
BsuI GTATCC 1 cut(s) 812
BtgI CCRYGG 3 cut(s) 581, 1083, 1515
BtsCI GGATG 4 cut(s) 12, 276, 356, 845
BtsIMutI CAGTG 3 cut(s) 714, 1177, 1216
BveI ACCTGC 2 cut(s) 171, 970
Cac8I GCNNGC 4 cut(s) 16, 152, 606, 696
CfoI GCGC 6 cut(s) 604, 724, 734, 976, 1066, 1177
Cfr10I RCCGGY 1 cut(s) 694
CseI GACGC 1 cut(s) 649
Csp6I GTAC 1 cut(s) 783
CspCI CAANNNNNGTGG 4 cut(s) 280, 315, 654, 689
CviAII CATG 7 cut(s) 208, 295, 809, 1180, 1243, 1474, 1516
CviQI GTAC 1 cut(s) 783
DpnI GATC 6 cut(s) 303, 338, 447, 636, 653, 749
DpnII GATC 6 cut(s) 301, 336, 445, 634, 651, 747
DrdI GACNNNNNNGTC 2 cut(s) 527, 646
DseDI GACNNNNNNGTC 2 cut(s) 527, 646
EaeI YGGCCR 2 cut(s) 429, 1140
Eam1104I CTCTTC 5 cut(s) 292, 661, 1214, 1237, 1325
EarI CTCTTC 5 cut(s) 292, 661, 1214, 1237, 1325
EciI GGCGGA 2 cut(s) 209, 367
Eco130I CCWWGG 4 cut(s) 140, 247, 1303, 1515
Eco31I GGTCTC 1 cut(s) 988
Eco47I GGWCC 5 cut(s) 62, 365, 520, 553, 1198
Eco47III AGCGCT 1 cut(s) 975
Eco57I CTGAAG 2 cut(s) 363, 1349
Eco81I CCTNAGG 4 cut(s) 450, 739, 1284, 1500
Eco88I CYCGRG 2 cut(s) 65, 1426
EcoO109I RGGNCCY 1 cut(s) 62
EcoRI GAATTC 1 cut(s) 106
EcoRII CCWGG 1 cut(s) 1390
EcoT14I CCWWGG 4 cut(s) 140, 247, 1303, 1515
ErhI CCWWGG 4 cut(s) 140, 247, 1303, 1515
Esp3I CGTCTC 2 cut(s) 503, 825
FaeI CATG 7 cut(s) 211, 298, 812, 1183, 1246, 1477, 1519
FalI AAGNNNNNCTT 4 cut(s) 443, 475, 825, 857
FaqI GGGAC 3 cut(s) 478, 1184, 1395
FatI CATG 7 cut(s) 207, 294, 808, 1179, 1242, 1473, 1515
FauI CCCGC 1 cut(s) 165
FbaI TGATCA 1 cut(s) 301
FblI GTMKAC 3 cut(s) 200, 688, 1094
FokI GGATG 4 cut(s) 19, 263, 343, 832
FspBI CTAG 3 cut(s) 701, 792, 1008
GlaI GCGC 6 cut(s) 603, 723, 733, 975, 1065, 1176
GsaI CCCAGC 1 cut(s) 771
GsuI CTGGAG 1 cut(s) 245
HaeII RGCGCY 5 cut(s) 605, 725, 735, 977, 1067
HapII CCGG 6 cut(s) 368, 695, 824, 968, 1157, 1361
HgaI GACGC 1 cut(s) 649
HhaI GCGC 6 cut(s) 604, 724, 734, 976, 1066, 1177
Hin1I GRCGYC 1 cut(s) 1384
Hin1II CATG 7 cut(s) 211, 298, 812, 1183, 1246, 1477, 1519
Hin6I GCGC 6 cut(s) 602, 722, 732, 974, 1064, 1175
HinP1I GCGC 6 cut(s) 602, 722, 732, 974, 1064, 1175
HincII GTYRAC 2 cut(s) 1095, 1300
HindII GTYRAC 2 cut(s) 1095, 1300
HinfI GANTC 4 cut(s) 197, 772, 912, 1033
HpaII CCGG 6 cut(s) 368, 695, 824, 968, 1157, 1361
HphI GGTGA 3 cut(s) 838, 853, 1427
Hpy166II GTNNAC 5 cut(s) 201, 689, 1095, 1300, 1471
Hpy188I TCNGA 5 cut(s) 343, 639, 1032, 1329, 1495
Hpy188III TCNNGA 6 cut(s) 60, 103, 219, 758, 968, 1361
Hpy8I GTNNAC 5 cut(s) 201, 689, 1095, 1300, 1471
Hpy99I CGWCG 3 cut(s) 43, 643, 883
HpyAV CCTTC 6 cut(s) 4, 851, 1270, 1363, 1412, 1416
HpyCH4III ACNGT 4 cut(s) 80, 568, 718, 883
HpyCH4IV ACGT 2 cut(s) 306, 1384
HpyCH4V TGCA 7 cut(s) 506, 754, 979, 1025, 1183, 1246, 1439
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 156, 320, 332, 377, 1130, 1139, 1235
HpySE526I ACGT 2 cut(s) 306, 1384
Hsp92I GRCGYC 1 cut(s) 1384
Hsp92II CATG 7 cut(s) 211, 298, 812, 1183, 1246, 1477, 1519
HspAI GCGC 6 cut(s) 602, 722, 732, 974, 1064, 1175
Kpn2I TCCGGA 2 cut(s) 967, 1360
KroI GCCGGC 1 cut(s) 694
KroNI GCCGGC 1 cut(s) 696
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 6 cut(s) 301, 336, 445, 634, 651, 747
LmnI GCTCC 3 cut(s) 226, 1033, 1285
Lsp1109I GCAGC 8 cut(s) 335, 364, 367, 963, 1037, 1108, 1423, 1434
LweI GCATC 4 cut(s) 269, 285, 763, 881
MaeI CTAG 3 cut(s) 701, 792, 1008
MaeII ACGT 2 cut(s) 306, 1384
MaeIII GTNAC 3 cut(s) 307, 424, 703
MalI GATC 6 cut(s) 303, 338, 447, 636, 653, 749
MbiI CCGCTC 1 cut(s) 314
MboI GATC 6 cut(s) 301, 336, 445, 634, 651, 747
MfeI CAATTG 1 cut(s) 1269
MflI RGATCY 1 cut(s) 634
MhlI GDGCHC 2 cut(s) 716, 1525
MlsI TGGCCA 1 cut(s) 1142
MluCI AATT 4 cut(s) 87, 106, 1269, 1319
MluNI TGGCCA 1 cut(s) 1142
MlyI GAGTC 2 cut(s) 206, 1042
MmeI TCCRAC 3 cut(s) 135, 662, 889
Mox20I TGGCCA 1 cut(s) 1142
MroI TCCGGA 2 cut(s) 967, 1360
MroNI GCCGGC 1 cut(s) 694
MscI TGGCCA 1 cut(s) 1142
MslI CAYNNNNRTG 1 cut(s) 1514
Msp20I TGGCCA 1 cut(s) 1142
MspA1I CMGCKG 1 cut(s) 946
MspI CCGG 6 cut(s) 368, 695, 824, 968, 1157, 1361
MspR9I CCNGG 1 cut(s) 1392
MunI CAATTG 1 cut(s) 1269
MvaI CCWGG 1 cut(s) 1392
MvnI CGCG 1 cut(s) 404
MwoI GCNNNNNNNGC 8 cut(s) 20, 156, 320, 332, 377, 1130, 1139, 1235
NaeI GCCGGC 1 cut(s) 696
NcoI CCATGG 1 cut(s) 1515
NdeII GATC 6 cut(s) 301, 336, 445, 634, 651, 747
NgoMIV GCCGGC 1 cut(s) 694
NlaIII CATG 7 cut(s) 211, 298, 812, 1183, 1246, 1477, 1519
NlaIV GGNNCC 6 cut(s) 64, 890, 1168, 1200, 1281, 1522
NspI RCATGY 1 cut(s) 1477
NspV TTCGAA 2 cut(s) 47, 775
PciI ACATGT 1 cut(s) 1473
PcsI WCGNNNNNNNCGW 2 cut(s) 44, 647
PdiI GCCGGC 1 cut(s) 696
PfeI GAWTC 2 cut(s) 772, 912
PflMI CCANNNNNTGG 1 cut(s) 146
PleI GAGTC 2 cut(s) 205, 1041
PpsI GAGTC 2 cut(s) 205, 1041
PpuMI RGGWCCY 1 cut(s) 62
PscI ACATGT 1 cut(s) 1473
Psp5II RGGWCCY 1 cut(s) 62
Psp6I CCWGG 1 cut(s) 1390
PspFI CCCAGC 1 cut(s) 767
PspGI CCWGG 1 cut(s) 1390
PspN4I GGNNCC 6 cut(s) 64, 890, 1168, 1200, 1281, 1522
PspPPI RGGWCCY 1 cut(s) 62
PstI CTGCAG 3 cut(s) 981, 1027, 1441
PsuI RGATCY 1 cut(s) 634
RsaI GTAC 1 cut(s) 784
RsaNI GTAC 1 cut(s) 783
RseI CAYNNNNRTG 1 cut(s) 1514
SalI GTCGAC 1 cut(s) 1093
Sau3AI GATC 6 cut(s) 301, 336, 445, 634, 651, 747
SchI GAGTC 2 cut(s) 206, 1042
ScrFI CCNGG 1 cut(s) 1392
SduI GDGCHC 2 cut(s) 716, 1525
SfaNI GCATC 4 cut(s) 269, 285, 763, 881
SfcI CTRYAG 5 cut(s) 977, 1023, 1103, 1191, 1437
SfiI GGCCNNNNNGGCC 2 cut(s) 1139, 1235
SfuI TTCGAA 2 cut(s) 47, 775
SinI GGWCC 5 cut(s) 62, 365, 520, 553, 1198
SmiMI CAYNNNNRTG 1 cut(s) 1514
Sse9I AATT 4 cut(s) 87, 106, 1269, 1319
SspI AATATT 1 cut(s) 1250
SspMI CTAG 3 cut(s) 701, 792, 1008
StyD4I CCNGG 1 cut(s) 1390
StyI CCWWGG 4 cut(s) 140, 247, 1303, 1515
TaaI ACNGT 4 cut(s) 80, 568, 718, 883
TaiI ACGT 2 cut(s) 309, 1387
TaqI TCGA 6 cut(s) 47, 621, 650, 775, 1094, 1527
TaqII GACCGA 2 cut(s) 537, 1105
TasI AATT 4 cut(s) 87, 106, 1269, 1319
TauI GCSGC 2 cut(s) 329, 791
TfiI GAWTC 2 cut(s) 772, 912
TscAI CASTG 3 cut(s) 721, 1177, 1216
TseI GCWGC 8 cut(s) 323, 377, 380, 976, 1025, 1121, 1422, 1436
TspDTI ATGAA 1 cut(s) 23
TspGWI ACGGA 4 cut(s) 412, 794, 976, 1072
TspRI CASTG 3 cut(s) 721, 1177, 1216
Van91I CCANNNNNTGG 1 cut(s) 146
VpaK11BI GGWCC 5 cut(s) 62, 365, 520, 553, 1198
XapI RAATTY 1 cut(s) 106
XceI RCATGY 1 cut(s) 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 147
XmiI GTMKAC 3 cut(s) 200, 688, 1094
XspI CTAG 3 cut(s) 701, 792, 1008
ZraI GACGTC 1 cut(s) 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.