Rmu_sc0009670.1_g000006

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009670.1
OG0000109
Physical Location & Seq
Reverse (-)
23570 .. 24885
1316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009670.1_g000006.1.cds

Sequence Viewer

Length: 1068 bp
atggttgatctcatcaccgctcgtctcgctgtggccttggccatctcggaggactgtcggacgtcctttggcccagctggcgctgctgctgtgtcttctaccattttgcgggcacaccaaaactggtatgtgtttcaattctctcacttggaggacagatcaaggattgtggatggtggtccatggttctttggtaagtgggcacttgctatgggggagttcgatggcctgcagagtgtcgttgttgtcccgctcctctctttgtcggtttgggttgagattattggcctctctcctgcttttatcattgagggagcggtggcgctcattggggccacgttaggggaggtgttgcacctcgacaggcaggggattcgaaagggtatggcgagggctcaggtccgacatgtcttgtcaacgccggtgagtcaggtattccctccttccacttttgatttcatgtctgaagcttctgatactgtgagattcaaatatgaacgtctcgttggattctgtcgtgtctgtgggatgatggagcacccacgatctggttgtgctggagccccagaggcggtggtggtctcaatcgaccataaccctaaccctaactcagctaggttcgctgctaagcccagatcacttcacattcctggtatttctggatcggcctttgctgcacatttggccaaggttccagctccagtaactgtacctatcatgaagcctatgcaggttaatgataaggccaataatcccattacagggaagaagagatatgcagcggtggctttagtacaatattcaaagcgcaagagagcagatgttgtgccccctccaactgcttcgaaggcaaaggttgggtgccgtccgggtcggaagaacaaccctaaacctgctagtttgaagctcaggaagctgacaactgaggaatccaaaacctcggcggaagaggaacttcaaggcaattgtactctctccttcatttggagaaggtcaaatggaagcggtccctgcagcagctccaaaacaaaatgtggaggagataccgtcctccagcaaagctcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

355

Amino Acids

38.19

Weight (kDa)

9.71

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 65
Acc36I ACCTGC 2 cut(s) 721, 901
AccB1I GGYRCC 1 cut(s) 861
AccB7I CCANNNNNTGG 1 cut(s) 548
AccBSI CCGCTC 3 cut(s) 20, 253, 317
AciI CCGC 8 cut(s) 18, 109, 251, 317, 572, 782, 944, 1005
AclWI GGATC 1 cut(s) 670
AcoI YGGCCR 2 cut(s) 39, 684
AcuI CTGAAG 1 cut(s) 486
AcyI GRCGYC 1 cut(s) 62
AfaI GTAC 3 cut(s) 711, 795, 970
AfiI CCNNNNNNNGG 7 cut(s) 108, 342, 548, 571, 761, 762, 984
AflIII ACRYGT 1 cut(s) 406
AgsI TTSAA 5 cut(s) 137, 490, 804, 904, 959
AjnI CCWGG 1 cut(s) 649
AjuI GAANNNNNNNTTGG 2 cut(s) 489, 521
AluBI AGCT 8 cut(s) 77, 470, 614, 698, 907, 916, 1020, 1062
AluI AGCT 8 cut(s) 77, 470, 614, 698, 907, 916, 1020, 1062
Alw21I GWGCWC 1 cut(s) 540
Alw26I GTCTC 3 cut(s) 29, 506, 586
AlwI GGATC 1 cut(s) 670
AlwNI CAGNNNCTG 1 cut(s) 707
AoxI GGCC 9 cut(s) 33, 39, 70, 226, 286, 333, 666, 684, 744
ApeKI GCWGC 7 cut(s) 83, 86, 623, 674, 779, 1014, 1017
AspLEI GCGC 3 cut(s) 83, 325, 810
AspS9I GGNCC 5 cut(s) 71, 179, 333, 400, 1007
AsuC2I CCSGG 1 cut(s) 870
AsuHPI GGTGA 2 cut(s) 7, 436
AsuII TTCGAA 2 cut(s) 376, 845
AvaII GGWCC 3 cut(s) 179, 400, 1007
BaeGI GKGCMC 3 cut(s) 115, 205, 831
BalI TGGCCA 2 cut(s) 41, 686
BanI GGYRCC 1 cut(s) 861
BanII GRGCYC 2 cut(s) 397, 565
BbsI GAAGAC 1 cut(s) 87
Bbv12I GWGCWC 1 cut(s) 540
BbvI GCAGC 7 cut(s) 70, 73, 610, 661, 791, 1026, 1029
BccI CCATC 4 cut(s) 50, 167, 218, 526
BceAI ACGGC 1 cut(s) 849
BcgI CGANNNNNNTGC 2 cut(s) 356, 390
BciT130I CCWGG 1 cut(s) 651
BcnI CCSGG 1 cut(s) 870
BcoDI GTCTC 3 cut(s) 29, 506, 586
BfaI CTAG 2 cut(s) 615, 897
BfmI CTRYAG 2 cut(s) 230, 1012
BfoI RGCGCY 2 cut(s) 84, 326
BfuAI ACCTGC 2 cut(s) 721, 901
BglI GCCNNNNNGGC 2 cut(s) 78, 569
BisI GCNGC 7 cut(s) 84, 87, 624, 675, 780, 1015, 1018
BlpI GCTNAGC 1 cut(s) 627
BlsI GCNGC 7 cut(s) 85, 88, 625, 676, 781, 1016, 1019
Bme1390I CCNGG 2 cut(s) 651, 870
Bme18I GGWCC 3 cut(s) 179, 400, 1007
BmgT120I GGNCC 5 cut(s) 71, 179, 333, 400, 1007
BmiI GGNNCC 5 cut(s) 334, 562, 693, 863, 1009
BmrFI CCNGG 2 cut(s) 651, 870
BpiI GAAGAC 1 cut(s) 87
BpmI CTGGAG 3 cut(s) 579, 684, 1037
Bpu10I CCTNAGC 2 cut(s) 396, 908
Bpu1102I GCTNAGC 1 cut(s) 627
Bpu14I TTCGAA 2 cut(s) 376, 845
BpuMI CCSGG 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 1 cut(s) 586
BsaJI CCNNGG 4 cut(s) 36, 182, 687, 939
BsaXI ACNNNNNCTCC 2 cut(s) 1032, 1062
Bsc4I CCNNNNNNNGG 7 cut(s) 108, 342, 548, 571, 761, 762, 984
Bse118I RCCGGY 1 cut(s) 421
Bse1I ACTGG 2 cut(s) 128, 701
BseBI CCWGG 1 cut(s) 651
BseDI CCNNGG 4 cut(s) 36, 182, 687, 939
BseGI GGATG 2 cut(s) 178, 534
BseLI CCNNNNNNNGG 7 cut(s) 108, 342, 548, 571, 761, 762, 984
BseMII CTCAG 4 cut(s) 410, 624, 915, 922
BseNI ACTGG 2 cut(s) 128, 701
BseRI GAGGAG 2 cut(s) 245, 1053
BseSI GKGCMC 3 cut(s) 115, 205, 831
BseXI GCAGC 7 cut(s) 70, 73, 610, 661, 791, 1026, 1029
BseYI CCCAGC 1 cut(s) 73
BsgI GTGCAG 1 cut(s) 660
BshFI GGCC 9 cut(s) 35, 41, 72, 228, 288, 335, 668, 686, 746
BshNI GGYRCC 1 cut(s) 861
BsiHKAI GWGCWC 1 cut(s) 540
BsiSI CCGG 2 cut(s) 422, 869
BslFI GGGAC 2 cut(s) 233, 993
BslI CCNNNNNNNGG 7 cut(s) 108, 342, 548, 571, 761, 762, 984
BsmAI GTCTC 3 cut(s) 29, 506, 586
BsmBI CGTCTC 2 cut(s) 29, 506
BsmFI GGGAC 2 cut(s) 233, 993
BsnI GGCC 9 cut(s) 35, 41, 72, 228, 288, 335, 668, 686, 746
Bso31I GGTCTC 1 cut(s) 586
Bsp119I TTCGAA 2 cut(s) 376, 845
Bsp1286I GDGCHC 6 cut(s) 115, 205, 397, 540, 565, 831
Bsp143I GATC 5 cut(s) 7, 158, 545, 635, 662
Bsp1720I GCTNAGC 1 cut(s) 627
Bsp19I CCATGG 1 cut(s) 182
BspACI CCGC 8 cut(s) 18, 109, 251, 317, 572, 782, 944, 1005
BspANI GGCC 9 cut(s) 35, 41, 72, 228, 288, 335, 668, 686, 746
BspCNI CTCAG 4 cut(s) 409, 623, 916, 921
BspHI TCATGA 1 cut(s) 717
BspLI GGNNCC 5 cut(s) 334, 562, 693, 863, 1009
BspMAI CTGCAG 2 cut(s) 234, 1016
BspMI ACCTGC 2 cut(s) 721, 901
BspPI GGATC 1 cut(s) 670
BspT104I TTCGAA 2 cut(s) 376, 845
BspT107I GGYRCC 1 cut(s) 861
BspTNI GGTCTC 1 cut(s) 586
BsrBI CCGCTC 3 cut(s) 20, 253, 317
BsrFI RCCGGY 1 cut(s) 421
BsrI ACTGG 2 cut(s) 128, 701
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 4 cut(s) 36, 182, 687, 939
BssMI GATC 5 cut(s) 7, 158, 545, 635, 662
BssNI GRCGYC 1 cut(s) 62
BssT1I CCWWGG 3 cut(s) 36, 182, 687
Bst2UI CCWGG 1 cut(s) 651
Bst4CI ACNGT 4 cut(s) 56, 481, 709, 1048
Bst6I CTCTTC 2 cut(s) 764, 942
BstACI GRCGYC 1 cut(s) 62
BstBI TTCGAA 2 cut(s) 376, 845
BstC8I GCNNGC 3 cut(s) 79, 111, 230
BstDEI CTNAG 5 cut(s) 396, 610, 627, 908, 924
BstDSI CCRYGG 1 cut(s) 182
BstF5I GGATG 2 cut(s) 178, 534
BstH2I RGCGCY 2 cut(s) 84, 326
BstHHI GCGC 3 cut(s) 83, 325, 810
BstKTI GATC 5 cut(s) 10, 161, 548, 638, 665
BstMAI GTCTC 3 cut(s) 29, 506, 586
BstMBI GATC 5 cut(s) 7, 158, 545, 635, 662
BstNI CCWGG 1 cut(s) 651
BstNSI RCATGY 1 cut(s) 410
BstSCI CCNGG 2 cut(s) 649, 868
BstSFI CTRYAG 2 cut(s) 230, 1012
BstSLI GKGCMC 3 cut(s) 115, 205, 831
BstV1I GCAGC 7 cut(s) 70, 73, 610, 661, 791, 1026, 1029
BstV2I GAAGAC 1 cut(s) 87
BsuRI GGCC 9 cut(s) 35, 41, 72, 228, 288, 335, 668, 686, 746
BtgI CCRYGG 1 cut(s) 182
BtsCI GGATG 2 cut(s) 178, 534
BveI ACCTGC 2 cut(s) 721, 901
Cac8I GCNNGC 3 cut(s) 79, 111, 230
CaiI CAGNNNCTG 1 cut(s) 707
CciI TCATGA 1 cut(s) 717
CfoI GCGC 3 cut(s) 83, 325, 810
Cfr10I RCCGGY 1 cut(s) 421
Cfr13I GGNCC 5 cut(s) 71, 179, 333, 400, 1007
Csp6I GTAC 3 cut(s) 710, 794, 969
CspCI CAANNNNNGTGG 2 cut(s) 150, 185
CviAII CATG 4 cut(s) 183, 407, 460, 718
CviQI GTAC 3 cut(s) 710, 794, 969
DdeI CTNAG 5 cut(s) 396, 610, 627, 908, 924
DpnI GATC 5 cut(s) 9, 160, 547, 637, 664
DpnII GATC 5 cut(s) 7, 158, 545, 635, 662
EaeI YGGCCR 2 cut(s) 39, 684
Eam1104I CTCTTC 2 cut(s) 764, 942
EarI CTCTTC 2 cut(s) 764, 942
EciI GGCGGA 1 cut(s) 959
Eco130I CCWWGG 3 cut(s) 36, 182, 687
Eco24I GRGCYC 2 cut(s) 397, 565
Eco31I GGTCTC 1 cut(s) 586
Eco47I GGWCC 3 cut(s) 179, 400, 1007
Eco57I CTGAAG 1 cut(s) 486
EcoRII CCWGG 1 cut(s) 649
EcoT14I CCWWGG 3 cut(s) 36, 182, 687
EcoT38I GRGCYC 2 cut(s) 397, 565
ErhI CCWWGG 3 cut(s) 36, 182, 687
Esp3I CGTCTC 2 cut(s) 29, 506
FaeI CATG 4 cut(s) 186, 410, 463, 721
FalI AAGNNNNNCTT 2 cut(s) 939, 971
FaqI GGGAC 2 cut(s) 233, 993
FatI CATG 4 cut(s) 182, 406, 459, 717
FauI CCCGC 2 cut(s) 102, 258
Fnu4HI GCNGC 7 cut(s) 84, 87, 624, 675, 780, 1015, 1018
FokI GGATG 2 cut(s) 185, 541
FriOI GRGCYC 2 cut(s) 397, 565
Fsp4HI GCNGC 7 cut(s) 84, 87, 624, 675, 780, 1015, 1018
FspBI CTAG 2 cut(s) 615, 897
GlaI GCGC 3 cut(s) 82, 324, 809
GluI GCNGC 7 cut(s) 84, 87, 624, 675, 780, 1015, 1018
GsaI CCCAGC 1 cut(s) 77
GsuI CTGGAG 3 cut(s) 579, 684, 1037
HaeII RGCGCY 2 cut(s) 84, 326
HaeIII GGCC 9 cut(s) 35, 41, 72, 228, 288, 335, 668, 686, 746
HapII CCGG 2 cut(s) 422, 869
HhaI GCGC 3 cut(s) 83, 325, 810
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 4 cut(s) 186, 410, 463, 721
Hin6I GCGC 3 cut(s) 81, 323, 808
HinP1I GCGC 3 cut(s) 81, 323, 808
HincII GTYRAC 1 cut(s) 417
HindII GTYRAC 1 cut(s) 417
HindIII AAGCTT 1 cut(s) 468
HinfI GANTC 5 cut(s) 373, 427, 486, 510, 929
HpaII CCGG 2 cut(s) 422, 869
HphI GGTGA 2 cut(s) 7, 436
Hpy166II GTNNAC 1 cut(s) 417
Hpy188I TCNGA 6 cut(s) 49, 60, 404, 466, 475, 876
Hpy188III TCNNGA 4 cut(s) 660, 718, 910, 1065
Hpy8I GTNNAC 1 cut(s) 417
HpyAV CCTTC 4 cut(s) 453, 841, 984, 988
HpyCH4III ACNGT 4 cut(s) 56, 481, 709, 1048
HpyCH4IV ACGT 3 cut(s) 62, 338, 499
HpyCH4V TGCA 6 cut(s) 232, 355, 677, 730, 779, 1014
HpyF3I CTNAG 5 cut(s) 396, 610, 627, 908, 924
HpySE526I ACGT 3 cut(s) 62, 338, 499
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 4 cut(s) 186, 410, 463, 721
HspAI GCGC 3 cut(s) 81, 323, 808
Kzo9I GATC 5 cut(s) 7, 158, 545, 635, 662
LmnI GCTCC 7 cut(s) 258, 314, 535, 560, 703, 1025, 1067
Lsp1109I GCAGC 7 cut(s) 70, 73, 610, 661, 791, 1026, 1029
MaeI CTAG 2 cut(s) 615, 897
MaeII ACGT 3 cut(s) 62, 338, 499
MaeIII GTNAC 1 cut(s) 703
MalI GATC 5 cut(s) 9, 160, 547, 637, 664
MbiI CCGCTC 3 cut(s) 20, 253, 317
MboI GATC 5 cut(s) 7, 158, 545, 635, 662
MboII GAAGA 5 cut(s) 87, 778, 781, 889, 959
MfeI CAATTG 1 cut(s) 964
MhlI GDGCHC 6 cut(s) 115, 205, 397, 540, 565, 831
MlsI TGGCCA 2 cut(s) 41, 686
MluCI AATT 2 cut(s) 137, 964
MluNI TGGCCA 2 cut(s) 41, 686
MlyI GAGTC 1 cut(s) 436
MmeI TCCRAC 5 cut(s) 38, 427, 487, 854, 860
Mox20I TGGCCA 2 cut(s) 41, 686
MscI TGGCCA 2 cut(s) 41, 686
MseI TTAA 1 cut(s) 735
Msp20I TGGCCA 2 cut(s) 41, 686
MspA1I CMGCKG 2 cut(s) 77, 782
MspI CCGG 2 cut(s) 422, 869
MspR9I CCNGG 2 cut(s) 651, 870
MunI CAATTG 1 cut(s) 964
MvaI CCWGG 1 cut(s) 651
NciI CCSGG 1 cut(s) 870
NcoI CCATGG 1 cut(s) 182
NdeII GATC 5 cut(s) 7, 158, 545, 635, 662
NlaIII CATG 4 cut(s) 186, 410, 463, 721
NlaIV GGNNCC 5 cut(s) 334, 562, 693, 863, 1009
NmeAIII GCCGAG 1 cut(s) 920
NspI RCATGY 1 cut(s) 410
NspV TTCGAA 2 cut(s) 376, 845
PagI TCATGA 1 cut(s) 717
PciI ACATGT 1 cut(s) 406
PfeI GAWTC 4 cut(s) 373, 486, 510, 929
PflMI CCANNNNNTGG 1 cut(s) 548
PkrI GCNGC 7 cut(s) 85, 88, 625, 676, 781, 1016, 1019
PleI GAGTC 1 cut(s) 435
PpsI GAGTC 1 cut(s) 435
PscI ACATGT 1 cut(s) 406
Psp6I CCWGG 1 cut(s) 649
PspFI CCCAGC 1 cut(s) 73
PspGI CCWGG 1 cut(s) 649
PspN4I GGNNCC 5 cut(s) 334, 562, 693, 863, 1009
PspPI GGNCC 5 cut(s) 71, 179, 333, 400, 1007
PstI CTGCAG 2 cut(s) 234, 1016
PstNI CAGNNNCTG 1 cut(s) 707
PvuII CAGCTG 1 cut(s) 77
RsaI GTAC 3 cut(s) 711, 795, 970
RsaNI GTAC 3 cut(s) 710, 794, 969
SaqAI TTAA 1 cut(s) 735
SatI GCNGC 7 cut(s) 84, 87, 624, 675, 780, 1015, 1018
Sau3AI GATC 5 cut(s) 7, 158, 545, 635, 662
Sau96I GGNCC 5 cut(s) 71, 179, 333, 400, 1007
SchI GAGTC 1 cut(s) 436
ScrFI CCNGG 2 cut(s) 651, 870
SduI GDGCHC 6 cut(s) 115, 205, 397, 540, 565, 831
SfcI CTRYAG 2 cut(s) 230, 1012
SfuI TTCGAA 2 cut(s) 376, 845
SgrAI CRCCGGYG 1 cut(s) 421
SinI GGWCC 3 cut(s) 179, 400, 1007
Sse9I AATT 2 cut(s) 137, 964
SsiI CCGC 8 cut(s) 18, 109, 251, 317, 572, 782, 944, 1005
SspI AATATT 1 cut(s) 800
SspMI CTAG 2 cut(s) 615, 897
StyD4I CCNGG 2 cut(s) 649, 868
StyI CCWWGG 3 cut(s) 36, 182, 687
TaaI ACNGT 4 cut(s) 56, 481, 709, 1048
TaiI ACGT 3 cut(s) 65, 341, 502
TaqI TCGA 5 cut(s) 222, 360, 376, 588, 845
TasI AATT 2 cut(s) 137, 964
TatI WGTACW 2 cut(s) 793, 968
TfiI GAWTC 4 cut(s) 373, 486, 510, 929
Tru1I TTAA 1 cut(s) 735
Tru9I TTAA 1 cut(s) 735
TseI GCWGC 7 cut(s) 83, 86, 623, 674, 779, 1014, 1017
TspDTI ATGAA 4 cut(s) 448, 510, 734, 970
Van91I CCANNNNNTGG 1 cut(s) 548
VpaK11BI GGWCC 3 cut(s) 179, 400, 1007
XceI RCATGY 1 cut(s) 410
XspI CTAG 2 cut(s) 615, 897
ZraI GACGTC 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.