Rw0G018350

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00818
OG0000109
Physical Location & Seq
Reverse (-)
11740 .. 13586
1847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G018350.1

Sequence Viewer

Length: 1347 bp
ATGGTGGAGGAGGTCTCAGCCCGTATGGCTGCTACGCTCGCAATCAAGGAGAATGGGAGGGTGTCCTTTGGGACTGCGGGCTCGTCGGCGATTTCTAGCCAGTCCTATGCATTGGGAGGCTTTTGTCTCAGAAGAAGATCGAACTTTGTCTCACGTCCTTTTATGGCTACCATGGCCAATGTGTGGGGGTTGAAACAGCGACTCTCTATCTGGAATCAAGGCCATCGTTTCATTTTGCGCTTTACGAAGACGAAGGAACGAAACAAGATCTTGTTCGAAGGGCCGTGGTTCTACGGTCGCTCTATGTTTGCTTTGGTCGTGTATGACGGCTGCTGTGAAGCGGAGTTGGTGCCCATCCCAGCTATCCCGGTCTGGGTGGAAGTGCTTGGCCTTCCTCCAATACTGATGACCATTGAAGCTATCTCCATGATCGGTGCTTCTCTAGGTCAGTTGGACAAAGTGAATATTCGCCGTGGCTTGAAGGCTAGGGTTCGCATCTCTCATCTGATCACAACTCCAGTGAAGCAAGCCTACCCTCCTATGCTCTTCAAGTTTGGGACAGGGAAGGATATGGTTTCTGCTGGGGTGACTTTCCGGTTTGAGAAGATGGTTGGTTTCTGTAGGGTTTGTGGCTTACTAGAACACTTGGAGTCTGGCTGTGCAGGGCTGCTGGATATGTCTGGAATCGACATCGTGGTTGGGGCGCAGCATCAGGCGGGGCGTTTGGAGGTGGGGGGCTCTAAACCTAGGTCGAACTTGCCCCCTGTGTTTGATTTTGTTGGTTTGGGTTCAACGTCGATGCCGATGTTTCAGGCTACTGCAGGTTTGTCTATGAGCAGTAGCGTGGCCACTCCTACTGTCAAGCCCTCCCATTCTAGTTTGTCTCTCTCTACACCCGGCCACGCTACAGAGGAGCTAGCTAAGCAAGTGGTGCTCCCGGTTATCCCTTCCCCACATCGGCAACTGGTGGTCGATGGGACTAAAAGGAAGGCTGAGGCTCGGGAATTGGTGACTTACAGTAAGAAAGCTCGAGCTGTGGTTCCTGTTCCCATAACTGAACCTGTGAGCATTGGTTTTGTCCCTGAGTTAGCTCTACCTCACCAGGCAGGTATCTTGATTGTCTCTCCCCCGAAGAGGCGCAAGGTGGGTAGGCCTGTAGGGGCAAAGAATAAGCCTAGGGTGGAGGAGATCTACCCTTGGAAGCTAGGGACTGCCTCAACCAAGAAAGTTAAGAAGCGTCAATTTCATATTGCCAAGAAAGCTTTGGTTATGGAGGAAGATCCGGCGGTGCGGGAGGTTCCTACGGGGAAGGCTGCTGTGGAAGAGATTTCTCCAATGGTTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

448

Amino Acids

48.73

Weight (kDa)

9.97

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 57 - 106 1.8e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 812, 1097
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 183
AciI CCGC 5 cut(s) 77, 341, 716, 1286, 1291
AclWI GGATC 1 cut(s) 1274
AcoI YGGCCR 3 cut(s) 174, 846, 898
AfiI CCNNNNNNNGG 4 cut(s) 183, 373, 957, 1134
AgsI TTSAA 5 cut(s) 193, 416, 481, 550, 792
AjiI CACGTC 1 cut(s) 155
AjnI CCWGG 1 cut(s) 1101
AluBI AGCT 9 cut(s) 362, 419, 916, 920, 1028, 1034, 1091, 1204, 1262
AluI AGCT 9 cut(s) 362, 419, 916, 920, 1028, 1034, 1091, 1204, 1262
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 5 cut(s) 19, 131, 154, 888, 1126
AlwI GGATC 1 cut(s) 1274
Ama87I CYCGRG 2 cut(s) 999, 1029
AoxI GGCC 7 cut(s) 174, 220, 281, 388, 846, 898, 1151
ApeKI GCWGC 5 cut(s) 29, 330, 667, 706, 1313
AspA2I CCTAGG 2 cut(s) 746, 1175
AspLEI GCGC 3 cut(s) 240, 706, 1140
AspS9I GGNCC 1 cut(s) 281
AsuC2I CCSGG 3 cut(s) 368, 897, 938
AsuHPI GGTGA 3 cut(s) 598, 1021, 1091
AsuII TTCGAA 1 cut(s) 276
AsuNHI GCTAGC 1 cut(s) 916
AvaI CYCGRG 2 cut(s) 999, 1029
AvrII CCTAGG 2 cut(s) 746, 1175
BaeGI GKGCMC 1 cut(s) 354
BalI TGGCCA 2 cut(s) 176, 848
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 2 cut(s) 83, 740
BarI GAAGNNNNNNTAC 2 cut(s) 515, 547
BbsI GAAGAC 1 cut(s) 254
Bbv12I GWGCWC 1 cut(s) 936
BbvCI CCTCAGC 1 cut(s) 993
BbvI GCAGC 5 cut(s) 16, 317, 654, 718, 1300
BccI CCATC 4 cut(s) 231, 362, 601, 968
BceAI ACGGC 3 cut(s) 268, 343, 456
BciT130I CCWGG 1 cut(s) 1103
BclI TGATCA 1 cut(s) 507
BcnI CCSGG 3 cut(s) 368, 897, 938
BcoDI GTCTC 5 cut(s) 19, 131, 154, 888, 1126
BfaI CTAG 9 cut(s) 96, 443, 486, 638, 747, 876, 917, 1176, 1205
BfmI CTRYAG 4 cut(s) 619, 819, 906, 1155
BfuAI ACCTGC 2 cut(s) 812, 1097
BglI GCCNNNNNGGC 1 cut(s) 26
BglII AGATCT 2 cut(s) 267, 1188
BisI GCNGC 5 cut(s) 30, 331, 668, 707, 1314
BlnI CCTAGG 2 cut(s) 746, 1175
BlpI GCTNAGC 1 cut(s) 921
BlsI GCNGC 5 cut(s) 31, 332, 669, 708, 1315
Bme1390I CCNGG 4 cut(s) 368, 897, 938, 1103
BmeT110I CYCGRG 2 cut(s) 999, 1029
BmgBI CACGTC 1 cut(s) 155
BmgT120I GGNCC 1 cut(s) 281
BmiI GGNNCC 3 cut(s) 351, 1041, 1299
BmrFI CCNGG 4 cut(s) 368, 897, 938, 1103
BmsI GCATC 3 cut(s) 504, 718, 789
BmtI GCTAGC 1 cut(s) 920
BpiI GAAGAC 1 cut(s) 254
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 501
Bpu10I CCTNAGC 1 cut(s) 993
Bpu1102I GCTNAGC 1 cut(s) 921
Bpu14I TTCGAA 1 cut(s) 276
BpuMI CCSGG 3 cut(s) 368, 897, 938
BsaI GGTCTC 1 cut(s) 19
BsaJI CCNNGG 6 cut(s) 171, 284, 472, 746, 1175, 1196
BsaWI WCCGGW 1 cut(s) 594
Bsc4I CCNNNNNNNGG 4 cut(s) 183, 373, 957, 1134
Bse1I ACTGG 3 cut(s) 100, 518, 969
BseBI CCWGG 1 cut(s) 1103
BseDI CCNNGG 6 cut(s) 171, 284, 472, 746, 1175, 1196
BseGI GGATG 1 cut(s) 354
BseLI CCNNNNNNNGG 4 cut(s) 183, 373, 957, 1134
BseMII CTCAG 4 cut(s) 30, 142, 984, 1074
BseNI ACTGG 3 cut(s) 100, 518, 969
BseRI GAGGAG 3 cut(s) 23, 926, 1199
BseSI GKGCMC 1 cut(s) 354
BseXI GCAGC 5 cut(s) 16, 317, 654, 718, 1300
BseYI CCCAGC 2 cut(s) 358, 581
BsgI GTGCAG 1 cut(s) 681
Bsh1285I CGRYCG 1 cut(s) 298
BshFI GGCC 7 cut(s) 176, 222, 283, 390, 848, 900, 1153
BshNI GGYRCC 1 cut(s) 349
BsiEI CGRYCG 1 cut(s) 298
BsiHKAI GWGCWC 1 cut(s) 936
BsiHKCI CYCGRG 2 cut(s) 999, 1029
BsiSI CCGG 5 cut(s) 368, 595, 897, 938, 1283
BslFI GGGAC 5 cut(s) 85, 571, 991, 1064, 1222
BslI CCNNNNNNNGG 4 cut(s) 183, 373, 957, 1134
BsmAI GTCTC 5 cut(s) 19, 131, 154, 888, 1126
BsmFI GGGAC 5 cut(s) 85, 571, 991, 1064, 1222
BsnI GGCC 7 cut(s) 176, 222, 283, 390, 848, 900, 1153
Bso31I GGTCTC 1 cut(s) 19
BsoBI CYCGRG 2 cut(s) 999, 1029
Bsp119I TTCGAA 1 cut(s) 276
Bsp1286I GDGCHC 4 cut(s) 83, 354, 740, 936
Bsp143I GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
Bsp1720I GCTNAGC 1 cut(s) 921
Bsp19I CCATGG 1 cut(s) 171
BspACI CCGC 5 cut(s) 77, 341, 716, 1286, 1291
BspANI GGCC 7 cut(s) 176, 222, 283, 390, 848, 900, 1153
BspCNI CTCAG 4 cut(s) 29, 141, 985, 1075
BspLI GGNNCC 3 cut(s) 351, 1041, 1299
BspMAI CTGCAG 1 cut(s) 823
BspMI ACCTGC 2 cut(s) 812, 1097
BspOI GCTAGC 1 cut(s) 920
BspPI GGATC 1 cut(s) 1274
BspQI GCTCTTC 1 cut(s) 551
BspT104I TTCGAA 1 cut(s) 276
BspT107I GGYRCC 1 cut(s) 349
BspTNI GGTCTC 1 cut(s) 19
BsrI ACTGG 3 cut(s) 100, 518, 969
BssECI CCNNGG 6 cut(s) 171, 284, 472, 746, 1175, 1196
BssMI GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
BssT1I CCWWGG 4 cut(s) 171, 746, 1175, 1196
Bst2UI CCWGG 1 cut(s) 1103
Bst4CI ACNGT 3 cut(s) 296, 859, 1019
Bst6I CTCTTC 3 cut(s) 551, 1127, 1317
BstAPI GCANNNNNTGC 1 cut(s) 931
BstBI TTCGAA 1 cut(s) 276
BstC8I GCNNGC 4 cut(s) 39, 79, 528, 918
BstDEI CTNAG 5 cut(s) 16, 128, 921, 993, 1083
BstDSI CCRYGG 3 cut(s) 171, 284, 472
BstF5I GGATG 1 cut(s) 354
BstHHI GCGC 3 cut(s) 240, 706, 1140
BstKTI GATC 6 cut(s) 140, 270, 432, 510, 1191, 1282
BstMAI GTCTC 5 cut(s) 19, 131, 154, 888, 1126
BstMBI GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
BstMCI CGRYCG 1 cut(s) 298
BstMWI GCNNNNNNNGC 6 cut(s) 26, 38, 173, 922, 931, 1259
BstNI CCWGG 1 cut(s) 1103
BstSCI CCNGG 4 cut(s) 366, 895, 936, 1101
BstSFI CTRYAG 4 cut(s) 619, 819, 906, 1155
BstSLI GKGCMC 1 cut(s) 354
BstV1I GCAGC 5 cut(s) 16, 317, 654, 718, 1300
BstV2I GAAGAC 1 cut(s) 254
BstX2I RGATCY 3 cut(s) 267, 1188, 1279
BstYI RGATCY 3 cut(s) 267, 1188, 1279
BsuRI GGCC 7 cut(s) 176, 222, 283, 390, 848, 900, 1153
BtgI CCRYGG 3 cut(s) 171, 284, 472
BtrI CACGTC 1 cut(s) 155
BtsCI GGATG 1 cut(s) 354
BtsIMutI CAGTG 1 cut(s) 525
BveI ACCTGC 2 cut(s) 812, 1097
Cac8I GCNNGC 4 cut(s) 39, 79, 528, 918
CfoI GCGC 3 cut(s) 240, 706, 1140
Cfr13I GGNCC 1 cut(s) 281
CseI GACGC 1 cut(s) 1226
CviAII CATG 2 cut(s) 172, 427
DdeI CTNAG 5 cut(s) 16, 128, 921, 993, 1083
DpnI GATC 6 cut(s) 139, 269, 431, 509, 1190, 1281
DpnII GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
EaeI YGGCCR 3 cut(s) 174, 846, 898
Eam1104I CTCTTC 3 cut(s) 551, 1127, 1317
EarI CTCTTC 3 cut(s) 551, 1127, 1317
Eco130I CCWWGG 4 cut(s) 171, 746, 1175, 1196
Eco147I AGGCCT 1 cut(s) 1153
Eco24I GRGCYC 2 cut(s) 83, 740
Eco31I GGTCTC 1 cut(s) 19
Eco88I CYCGRG 2 cut(s) 999, 1029
EcoRII CCWGG 1 cut(s) 1101
EcoT14I CCWWGG 4 cut(s) 171, 746, 1175, 1196
EcoT22I ATGCAT 1 cut(s) 112
EcoT38I GRGCYC 2 cut(s) 83, 740
ErhI CCWWGG 4 cut(s) 171, 746, 1175, 1196
FaeI CATG 2 cut(s) 175, 430
FaqI GGGAC 5 cut(s) 85, 571, 991, 1064, 1222
FatI CATG 2 cut(s) 171, 426
FauI CCCGC 3 cut(s) 70, 709, 1284
FbaI TGATCA 1 cut(s) 507
Fnu4HI GCNGC 5 cut(s) 30, 331, 668, 707, 1314
FokI GGATG 1 cut(s) 341
FriOI GRGCYC 2 cut(s) 83, 740
Fsp4HI GCNGC 5 cut(s) 30, 331, 668, 707, 1314
FspBI CTAG 9 cut(s) 96, 443, 486, 638, 747, 876, 917, 1176, 1205
GlaI GCGC 3 cut(s) 239, 705, 1139
GluI GCNGC 5 cut(s) 30, 331, 668, 707, 1314
GsaI CCCAGC 2 cut(s) 362, 585
GsuI CTGGAG 1 cut(s) 501
HaeIII GGCC 7 cut(s) 176, 222, 283, 390, 848, 900, 1153
HapII CCGG 5 cut(s) 368, 595, 897, 938, 1283
HgaI GACGC 1 cut(s) 1226
HhaI GCGC 3 cut(s) 240, 706, 1140
Hin1II CATG 2 cut(s) 175, 430
Hin6I GCGC 3 cut(s) 238, 704, 1138
HinP1I GCGC 3 cut(s) 238, 704, 1138
HincII GTYRAC 1 cut(s) 1342
HindII GTYRAC 1 cut(s) 1342
HindIII AAGCTT 1 cut(s) 1260
HinfI GANTC 4 cut(s) 201, 214, 650, 684
HpaII CCGG 5 cut(s) 368, 595, 897, 938, 1283
HphI GGTGA 3 cut(s) 598, 1021, 1091
Hpy166II GTNNAC 1 cut(s) 1342
Hpy188I TCNGA 2 cut(s) 131, 507
Hpy188III TCNNGA 4 cut(s) 211, 681, 1001, 1114
Hpy8I GTNNAC 1 cut(s) 1342
Hpy99I CGWCG 2 cut(s) 88, 799
HpyAV CCTTC 8 cut(s) 247, 272, 401, 475, 559, 957, 982, 1303
HpyCH4III ACNGT 3 cut(s) 296, 859, 1019
HpyCH4IV ACGT 2 cut(s) 154, 794
HpyCH4V TGCA 3 cut(s) 110, 662, 821
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 38, 173, 922, 931, 1259
HpyF3I CTNAG 5 cut(s) 16, 128, 921, 993, 1083
HpySE526I ACGT 2 cut(s) 154, 794
Hsp92II CATG 2 cut(s) 175, 430
HspAI GCGC 3 cut(s) 238, 704, 1138
Ksp22I TGATCA 1 cut(s) 507
Kzo9I GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
LguI GCTCTTC 1 cut(s) 551
LmnI GCTCC 2 cut(s) 913, 939
Lsp1109I GCAGC 5 cut(s) 16, 317, 654, 718, 1300
LweI GCATC 3 cut(s) 504, 718, 789
MaeI CTAG 9 cut(s) 96, 443, 486, 638, 747, 876, 917, 1176, 1205
MaeII ACGT 2 cut(s) 154, 794
MaeIII GTNAC 2 cut(s) 586, 1009
MalI GATC 6 cut(s) 139, 269, 431, 509, 1190, 1281
MboI GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
MboII GAAGA 8 cut(s) 144, 147, 259, 538, 616, 1144, 1289, 1334
MflI RGATCY 3 cut(s) 267, 1188, 1279
MhlI GDGCHC 4 cut(s) 83, 354, 740, 936
MlsI TGGCCA 2 cut(s) 176, 848
MluCI AATT 2 cut(s) 1004, 1241
MluNI TGGCCA 2 cut(s) 176, 848
MlyI GAGTC 2 cut(s) 195, 659
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 2 cut(s) 176, 848
Mph1103I ATGCAT 1 cut(s) 112
MscI TGGCCA 2 cut(s) 176, 848
MseI TTAA 1 cut(s) 1230
Msp20I TGGCCA 2 cut(s) 176, 848
MspI CCGG 5 cut(s) 368, 595, 897, 938, 1283
MspR9I CCNGG 4 cut(s) 368, 897, 938, 1103
MvaI CCWGG 1 cut(s) 1103
MwoI GCNNNNNNNGC 6 cut(s) 26, 38, 173, 922, 931, 1259
NciI CCSGG 3 cut(s) 368, 897, 938
NcoI CCATGG 1 cut(s) 171
NdeII GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
NheI GCTAGC 1 cut(s) 916
NlaIII CATG 2 cut(s) 175, 430
NlaIV GGNNCC 3 cut(s) 351, 1041, 1299
NmuCI GTSAC 2 cut(s) 586, 1009
NsiI ATGCAT 1 cut(s) 112
NspV TTCGAA 1 cut(s) 276
PaeR7I CTCGAG 1 cut(s) 1029
PceI AGGCCT 1 cut(s) 1153
PciSI GCTCTTC 1 cut(s) 551
PcsI WCGNNNNNNNCGW 1 cut(s) 800
PfeI GAWTC 2 cut(s) 214, 684
PflMI CCANNNNNTGG 1 cut(s) 183
PkrI GCNGC 5 cut(s) 31, 332, 669, 708, 1315
PleI GAGTC 2 cut(s) 195, 658
PpsI GAGTC 2 cut(s) 195, 658
Psp6I CCWGG 1 cut(s) 1101
PspFI CCCAGC 2 cut(s) 358, 581
PspGI CCWGG 1 cut(s) 1101
PspN4I GGNNCC 3 cut(s) 351, 1041, 1299
PspPI GGNCC 1 cut(s) 281
PspXI VCTCGAGB 1 cut(s) 1029
PstI CTGCAG 1 cut(s) 823
PsuI RGATCY 3 cut(s) 267, 1188, 1279
SapI GCTCTTC 1 cut(s) 551
SaqAI TTAA 1 cut(s) 1230
SatI GCNGC 5 cut(s) 30, 331, 668, 707, 1314
Sau3AI GATC 6 cut(s) 137, 267, 429, 507, 1188, 1279
Sau96I GGNCC 1 cut(s) 281
SchI GAGTC 2 cut(s) 195, 659
ScrFI CCNGG 4 cut(s) 368, 897, 938, 1103
SduI GDGCHC 4 cut(s) 83, 354, 740, 936
SfaNI GCATC 3 cut(s) 504, 718, 789
SfcI CTRYAG 4 cut(s) 619, 819, 906, 1155
Sfr274I CTCGAG 1 cut(s) 1029
SfuI TTCGAA 1 cut(s) 276
SlaI CTCGAG 1 cut(s) 1029
SmlI CTYRAG 1 cut(s) 1029
SmoI CTYRAG 1 cut(s) 1029
Sse9I AATT 2 cut(s) 1004, 1241
SseBI AGGCCT 1 cut(s) 1153
SsiI CCGC 5 cut(s) 77, 341, 716, 1286, 1291
SspI AATATT 1 cut(s) 466
SspMI CTAG 9 cut(s) 96, 443, 486, 638, 747, 876, 917, 1176, 1205
StuI AGGCCT 1 cut(s) 1153
StyD4I CCNGG 4 cut(s) 366, 895, 936, 1101
StyI CCWWGG 4 cut(s) 171, 746, 1175, 1196
TaaI ACNGT 3 cut(s) 296, 859, 1019
TaiI ACGT 2 cut(s) 157, 797
TaqI TCGA 7 cut(s) 140, 276, 687, 752, 797, 972, 1030
TasI AATT 2 cut(s) 1004, 1241
TfiI GAWTC 2 cut(s) 214, 684
Tru1I TTAA 1 cut(s) 1230
Tru9I TTAA 1 cut(s) 1230
TscAI CASTG 1 cut(s) 525
TseFI GTSAC 2 cut(s) 586, 1009
TseI GCWGC 5 cut(s) 29, 330, 667, 706, 1313
Tsp45I GTSAC 2 cut(s) 586, 1009
TspDTI ATGAA 2 cut(s) 220, 1235
TspRI CASTG 1 cut(s) 525
Van91I CCANNNNNTGG 1 cut(s) 183
XcmI CCANNNNNNNNNTGG 1 cut(s) 1261
XhoI CTCGAG 1 cut(s) 1029
XmaJI CCTAGG 2 cut(s) 746, 1175
XspI CTAG 9 cut(s) 96, 443, 486, 638, 747, 876, 917, 1176, 1205
Zsp2I ATGCAT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.