No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 86 - 119 | 4.3e-06 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 730 |
| AccB1I | GGYRCC | 1 cut(s) | 176 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 247 |
| AccII | CGCG | 1 cut(s) | 439 |
| AciI | CCGC | 3 cut(s) | 96, 380, 383 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 647 |
| AfaI | GTAC | 2 cut(s) | 296, 715 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 202, 247, 598 |
| AgsI | TTSAA | 3 cut(s) | 200, 292, 572 |
| AluBI | AGCT | 5 cut(s) | 423, 580, 698, 776, 784 |
| AluI | AGCT | 5 cut(s) | 423, 580, 698, 776, 784 |
| Alw21I | GWGCWC | 1 cut(s) | 778 |
| Alw26I | GTCTC | 1 cut(s) | 621 |
| AoxI | GGCC | 2 cut(s) | 3, 234 |
| ApeKI | GCWGC | 4 cut(s) | 29, 32, 532, 724 |
| AseI | ATTAAT | 2 cut(s) | 146, 510 |
| AspLEI | GCGC | 2 cut(s) | 439, 537 |
| AspS9I | GGNCC | 1 cut(s) | 362 |
| AvaII | GGWCC | 1 cut(s) | 362 |
| BanI | GGYRCC | 1 cut(s) | 176 |
| BanII | GRGCYC | 3 cut(s) | 50, 433, 778 |
| BbsI | GAAGAC | 1 cut(s) | 119 |
| Bbv12I | GWGCWC | 1 cut(s) | 778 |
| BbvCI | CCTCAGC | 1 cut(s) | 576 |
| BbvI | GCAGC | 4 cut(s) | 16, 19, 544, 736 |
| BccI | CCATC | 3 cut(s) | 73, 493, 668 |
| BciVI | GTATCC | 1 cut(s) | 816 |
| BcoDI | GTCTC | 1 cut(s) | 621 |
| BfaI | CTAG | 4 cut(s) | 420, 434, 650, 779 |
| BfuAI | ACCTGC | 1 cut(s) | 730 |
| BfuI | GTATCC | 1 cut(s) | 816 |
| BisI | GCNGC | 5 cut(s) | 30, 33, 381, 533, 725 |
| BlsI | GCNGC | 5 cut(s) | 31, 34, 382, 534, 726 |
| Bme18I | GGWCC | 1 cut(s) | 362 |
| BmgT120I | GGNCC | 1 cut(s) | 362 |
| BmiI | GGNNCC | 3 cut(s) | 141, 178, 744 |
| BpiI | GAAGAC | 1 cut(s) | 119 |
| BpmI | CTGGAG | 1 cut(s) | 540 |
| Bpu10I | CCTNAGC | 2 cut(s) | 413, 576 |
| BpuEI | CTTGAG | 2 cut(s) | 34, 684 |
| BsaBI | GATNNNNATC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 2 cut(s) | 690, 818 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 124, 154, 513, 543 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 202, 247, 598 |
| Bse1I | ACTGG | 3 cut(s) | 113, 339, 355 |
| Bse3DI | GCAATG | 1 cut(s) | 546 |
| Bse8I | GATNNNNATC | 1 cut(s) | 315 |
| BseDI | CCNNGG | 2 cut(s) | 690, 818 |
| BseJI | GATNNNNATC | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 202, 247, 598 |
| BseMI | GCAATG | 1 cut(s) | 546 |
| BseMII | CTCAG | 2 cut(s) | 590, 818 |
| BseNI | ACTGG | 3 cut(s) | 113, 339, 355 |
| BseRI | GAGGAG | 3 cut(s) | 518, 609, 612 |
| BseXI | GCAGC | 4 cut(s) | 16, 19, 544, 736 |
| BsgI | GTGCAG | 2 cut(s) | 18, 551 |
| Bsh1236I | CGCG | 1 cut(s) | 439 |
| BshFI | GGCC | 2 cut(s) | 5, 236 |
| BshNI | GGYRCC | 1 cut(s) | 176 |
| BsiHKAI | GWGCWC | 1 cut(s) | 778 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 202, 247, 598 |
| BsmAI | GTCTC | 1 cut(s) | 621 |
| BsmI | GAATGC | 1 cut(s) | 453 |
| BsnI | GGCC | 2 cut(s) | 5, 236 |
| Bsp1286I | GDGCHC | 3 cut(s) | 50, 433, 778 |
| Bsp143I | GATC | 3 cut(s) | 72, 388, 583 |
| Bsp19I | CCATGG | 1 cut(s) | 818 |
| BspACI | CCGC | 3 cut(s) | 96, 380, 383 |
| BspANI | GGCC | 2 cut(s) | 5, 236 |
| BspCNI | CTCAG | 2 cut(s) | 589, 819 |
| BspFNI | CGCG | 1 cut(s) | 439 |
| BspLI | GGNNCC | 3 cut(s) | 141, 178, 744 |
| BspMI | ACCTGC | 1 cut(s) | 730 |
| BspT107I | GGYRCC | 1 cut(s) | 176 |
| BsrDI | GCAATG | 1 cut(s) | 546 |
| BsrI | ACTGG | 3 cut(s) | 113, 339, 355 |
| BssECI | CCNNGG | 2 cut(s) | 690, 818 |
| BssMI | GATC | 3 cut(s) | 72, 388, 583 |
| BssT1I | CCWWGG | 2 cut(s) | 690, 818 |
| Bst4CI | ACNGT | 4 cut(s) | 39, 118, 609, 718 |
| Bst6I | CTCTTC | 1 cut(s) | 629 |
| BstC8I | GCNNGC | 3 cut(s) | 22, 647, 786 |
| BstDEI | CTNAG | 6 cut(s) | 345, 402, 413, 576, 827, 833 |
| BstDSI | CCRYGG | 1 cut(s) | 818 |
| BstFNI | CGCG | 1 cut(s) | 439 |
| BstHHI | GCGC | 2 cut(s) | 439, 537 |
| BstKTI | GATC | 3 cut(s) | 75, 391, 586 |
| BstMAI | GTCTC | 1 cut(s) | 621 |
| BstMBI | GATC | 3 cut(s) | 72, 388, 583 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 543 |
| BstUI | CGCG | 1 cut(s) | 439 |
| BstV1I | GCAGC | 4 cut(s) | 16, 19, 544, 736 |
| BstV2I | GAAGAC | 1 cut(s) | 119 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 677 |
| BsuI | GTATCC | 1 cut(s) | 816 |
| BsuRI | GGCC | 2 cut(s) | 5, 236 |
| BtgI | CCRYGG | 1 cut(s) | 818 |
| BtsIMutI | CAGTG | 2 cut(s) | 35, 282 |
| BveI | ACCTGC | 1 cut(s) | 730 |
| Cac8I | GCNNGC | 3 cut(s) | 22, 647, 786 |
| CfoI | GCGC | 2 cut(s) | 439, 537 |
| Cfr13I | GGNCC | 1 cut(s) | 362 |
| CseI | GACGC | 3 cut(s) | 289, 428, 459 |
| Csp6I | GTAC | 2 cut(s) | 295, 714 |
| CviAII | CATG | 2 cut(s) | 730, 819 |
| CviQI | GTAC | 2 cut(s) | 295, 714 |
| DdeI | CTNAG | 6 cut(s) | 345, 402, 413, 576, 827, 833 |
| DpnI | GATC | 3 cut(s) | 74, 390, 585 |
| DpnII | GATC | 3 cut(s) | 72, 388, 583 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 629 |
| EarI | CTCTTC | 1 cut(s) | 629 |
| EciI | GGCGGA | 1 cut(s) | 398 |
| Ecl136II | GAGCTC | 1 cut(s) | 776 |
| Eco130I | CCWWGG | 2 cut(s) | 690, 818 |
| Eco147I | AGGCCT | 1 cut(s) | 236 |
| Eco24I | GRGCYC | 3 cut(s) | 50, 433, 778 |
| Eco32I | GATATC | 1 cut(s) | 683 |
| Eco47I | GGWCC | 1 cut(s) | 362 |
| Eco53kI | GAGCTC | 1 cut(s) | 776 |
| Eco57I | CTGAAG | 1 cut(s) | 647 |
| EcoICRI | GAGCTC | 1 cut(s) | 776 |
| EcoRV | GATATC | 1 cut(s) | 683 |
| EcoT14I | CCWWGG | 2 cut(s) | 690, 818 |
| EcoT38I | GRGCYC | 3 cut(s) | 50, 433, 778 |
| ErhI | CCWWGG | 2 cut(s) | 690, 818 |
| FaeI | CATG | 2 cut(s) | 733, 822 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 551, 583 |
| FatI | CATG | 2 cut(s) | 729, 818 |
| FauNDI | CATATG | 1 cut(s) | 303 |
| Fnu4HI | GCNGC | 5 cut(s) | 30, 33, 381, 533, 725 |
| FriOI | GRGCYC | 3 cut(s) | 50, 433, 778 |
| Fsp4HI | GCNGC | 5 cut(s) | 30, 33, 381, 533, 725 |
| FspBI | CTAG | 4 cut(s) | 420, 434, 650, 779 |
| GlaI | GCGC | 2 cut(s) | 438, 536 |
| GluI | GCNGC | 5 cut(s) | 30, 33, 381, 533, 725 |
| GsuI | CTGGAG | 1 cut(s) | 540 |
| HaeIII | GGCC | 2 cut(s) | 5, 236 |
| HgaI | GACGC | 3 cut(s) | 289, 428, 459 |
| HhaI | GCGC | 2 cut(s) | 439, 537 |
| Hin1II | CATG | 2 cut(s) | 733, 822 |
| Hin6I | GCGC | 2 cut(s) | 437, 535 |
| HinP1I | GCGC | 2 cut(s) | 437, 535 |
| HinfI | GANTC | 4 cut(s) | 217, 658, 800, 814 |
| Hpy166II | GTNNAC | 2 cut(s) | 101, 132 |
| Hpy188I | TCNGA | 4 cut(s) | 70, 125, 369, 627 |
| Hpy188III | TCNNGA | 3 cut(s) | 102, 519, 779 |
| Hpy8I | GTNNAC | 2 cut(s) | 101, 132 |
| HpyAV | CCTTC | 2 cut(s) | 151, 206 |
| HpyCH4III | ACNGT | 4 cut(s) | 39, 118, 609, 718 |
| HpyCH4V | TGCA | 4 cut(s) | 20, 35, 532, 739 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 543 |
| HpyF3I | CTNAG | 6 cut(s) | 345, 402, 413, 576, 827, 833 |
| Hsp92II | CATG | 2 cut(s) | 733, 822 |
| HspAI | GCGC | 2 cut(s) | 437, 535 |
| Kzo9I | GATC | 3 cut(s) | 72, 388, 583 |
| LmnI | GCTCC | 2 cut(s) | 145, 556 |
| Lsp1109I | GCAGC | 4 cut(s) | 16, 19, 544, 736 |
| MaeI | CTAG | 4 cut(s) | 420, 434, 650, 779 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MalI | GATC | 3 cut(s) | 74, 390, 585 |
| MboI | GATC | 3 cut(s) | 72, 388, 583 |
| MboII | GAAGA | 7 cut(s) | 124, 398, 484, 578, 640, 643, 646 |
| MfeI | CAATTG | 1 cut(s) | 200 |
| MhlI | GDGCHC | 3 cut(s) | 50, 433, 778 |
| MluCI | AATT | 2 cut(s) | 200, 444 |
| MlyI | GAGTC | 2 cut(s) | 667, 823 |
| MseI | TTAA | 3 cut(s) | 146, 510, 558 |
| MslI | CAYNNNNRTG | 2 cut(s) | 225, 734 |
| MunI | CAATTG | 1 cut(s) | 200 |
| Mva1269I | GAATGC | 1 cut(s) | 453 |
| MvnI | CGCG | 1 cut(s) | 439 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 543 |
| NcoI | CCATGG | 1 cut(s) | 818 |
| NdeI | CATATG | 1 cut(s) | 303 |
| NdeII | GATC | 3 cut(s) | 72, 388, 583 |
| NlaIII | CATG | 2 cut(s) | 733, 822 |
| NlaIV | GGNNCC | 3 cut(s) | 141, 178, 744 |
| NmuCI | GTSAC | 1 cut(s) | 277 |
| PceI | AGGCCT | 1 cut(s) | 236 |
| PctI | GAATGC | 1 cut(s) | 453 |
| PfeI | GAWTC | 2 cut(s) | 217, 800 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 247 |
| PkrI | GCNGC | 5 cut(s) | 31, 34, 382, 534, 726 |
| PleI | GAGTC | 2 cut(s) | 666, 822 |
| PpsI | GAGTC | 2 cut(s) | 666, 822 |
| PshBI | ATTAAT | 2 cut(s) | 146, 510 |
| Psp124BI | GAGCTC | 1 cut(s) | 778 |
| PspN4I | GGNNCC | 3 cut(s) | 141, 178, 744 |
| PspPI | GGNCC | 1 cut(s) | 362 |
| RsaI | GTAC | 2 cut(s) | 296, 715 |
| RsaNI | GTAC | 2 cut(s) | 295, 714 |
| RseI | CAYNNNNRTG | 2 cut(s) | 225, 734 |
| SacI | GAGCTC | 1 cut(s) | 778 |
| SaqAI | TTAA | 3 cut(s) | 146, 510, 558 |
| SatI | GCNGC | 5 cut(s) | 30, 33, 381, 533, 725 |
| Sau3AI | GATC | 3 cut(s) | 72, 388, 583 |
| Sau96I | GGNCC | 1 cut(s) | 362 |
| SchI | GAGTC | 2 cut(s) | 667, 823 |
| SduI | GDGCHC | 3 cut(s) | 50, 433, 778 |
| SinI | GGWCC | 1 cut(s) | 362 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 225, 734 |
| SmlI | CTYRAG | 2 cut(s) | 49, 699 |
| SmoI | CTYRAG | 2 cut(s) | 49, 699 |
| Sse9I | AATT | 2 cut(s) | 200, 444 |
| SseBI | AGGCCT | 1 cut(s) | 236 |
| SsiI | CCGC | 3 cut(s) | 96, 380, 383 |
| SspI | AATATT | 1 cut(s) | 514 |
| SspMI | CTAG | 4 cut(s) | 420, 434, 650, 779 |
| SstI | GAGCTC | 1 cut(s) | 778 |
| StuI | AGGCCT | 1 cut(s) | 236 |
| StyI | CCWWGG | 2 cut(s) | 690, 818 |
| TaaI | ACNGT | 4 cut(s) | 39, 118, 609, 718 |
| TasI | AATT | 2 cut(s) | 200, 444 |
| TauI | GCSGC | 1 cut(s) | 383 |
| TfiI | GAWTC | 2 cut(s) | 217, 800 |
| Tru1I | TTAA | 3 cut(s) | 146, 510, 558 |
| Tru9I | TTAA | 3 cut(s) | 146, 510, 558 |
| TscAI | CASTG | 2 cut(s) | 42, 282 |
| TseFI | GTSAC | 1 cut(s) | 277 |
| TseI | GCWGC | 4 cut(s) | 29, 32, 532, 724 |
| Tsp45I | GTSAC | 1 cut(s) | 277 |
| TspDTI | ATGAA | 4 cut(s) | 209, 275, 485, 540 |
| TspGWI | ACGGA | 2 cut(s) | 149, 410 |
| TspRI | CASTG | 2 cut(s) | 42, 282 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 247 |
| VpaK11BI | GGWCC | 1 cut(s) | 362 |
| VspI | ATTAAT | 2 cut(s) | 146, 510 |
| XbaI | TCTAGA | 1 cut(s) | 778 |
| XspI | CTAG | 4 cut(s) | 420, 434, 650, 779 |