FvH4_5g30551

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000109
Physical Location & Seq
Forward (+)
21430929 .. 21433491
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g30551.t1

Sequence Viewer

Length: 1437 bp
ATGGTCAACGAGGTATCCAGATTGACGGCAGTGTTGGCGATCTCGGAGAAAGGCAAGGTCTCCTTTGGAGCCGCCGGAGCAGCGACGTACTCAGGCCATGCCTATGCGGTGGGGCGTCTGCTCTCATCTAAGAAGAAAGTGGTTCCAAAATCGTTCATGGCAACGATGGCCGCCATGTGGGGGAAGAAGAATTGGCTACAGATCGGACAAGAAGGAGATCGGACGGCGGAGGATGCAGTTCCGATCACCACCATGCCTGTTTGGGTGGAGATATTCGGTCTCCCTCCGGATTTGAAGACCAAGGAGGCACTCTTCATGGTTAGTGCAACCCTAGGGACCATCATTCAGCCATATCTTCCAAACCTGAAATCTGGTGCTAGGGCAAGAATCCGAATTGAGCATCGTCTTGATTCTCCGGTCAAGCAAGCATATCTTCCGATGGTGTTTGAATTTGGAGAAGGTAATGATCTTACTTCTGCTTGGTTAACTTTCAAATATGAGAGGATATGTGGGTTTTGTCGGATCTGTGGGCTGTTTGAGCATCCGATGAGTGGTTGCCGTGGATCGCCGGATATGTCGTCGACTGTGAGGATAGGTGCACGGTTTGGTAACCCTAACCCTAGCAGTTCAGCTAGTCTATATGGTTCAACTTTGAACCCTTTTCAGAATATTGGTTCGAATCCAATGCAGACAAGGATAGCTCCGGTGCAACCATTGGTGTTTAGGCAGGTGGTGGACTCTCCGCCGGTGCCCGTCTCAAGGGAGATTGTTCTCTCTACCAAGATGATCTCAGGGACCAAGAGGAATGCGTCCTCGTTGATGGAAGTTGATCTGGGCAAACGCCCTAAGGGTCCTCCAACTGTGCTTGAAGCTGCCAACGCCAACTTGGGGCCTGTGTGGAGCTGTCACTCCCTAATTTTGCAGACTGATCAGGAGAAGGTGGTATTGGAGGAACCCGGGGAAACCTCCTCTGCTTCCTTGAACTTTAGTTTTGGTTACTATTTGGTTGAACTCCATAGTAGTTTCGTTAGGTTGGTTTTGGGCTATCTAGCATGGCTTTTTCTATCGTTGCCTTTGCGGGATGAAGAAACATATTTGGAGGAGTCCTATGAAGAGCCACGTGATGTTGAGACTTTTGAGGATTGCTTAAAAGAGGAATCATTCAAAACTCCTACATTTGGACCTTTATTGCTGCATGTAGATACAGTGGTACCTGAATGTCTCAAATCAGATAAGGAGATTCTTGTTGTAATTGAGAAAGGTTGGAGACAATGGAAGAAGAAGAAGAAGAAGAAAAAGATAAAGAAGAGCTTCATATCTTATATGTCCATTACTCCCAAATTACTCAAATTGCTACCAAAGGACCATGAAATATCTTTGAAGAGGGTCAAGCATTTGATCGAACCGTGGCCTAAGCCTCTTGATTATTCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

479

Amino Acids

53.35

Weight (kDa)

9.08

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 159 - 187 6.6e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 718
Acc36I ACCTGC 1 cut(s) 718
Acc65I GGTACC 1 cut(s) 1210
AccB1I GGYRCC 2 cut(s) 748, 1210
AccI GTMKAC 1 cut(s) 581
AccIII TCCGGA 1 cut(s) 286
AciI CCGC 6 cut(s) 72, 107, 171, 227, 743, 1078
AclWI GGATC 2 cut(s) 530, 571
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 1 cut(s) 449
AcvI CACGTG 1 cut(s) 1121
AcyI GRCGYC 1 cut(s) 115
AfaI GTAC 2 cut(s) 89, 1212
AfiI CCNNNNNNNGG 6 cut(s) 177, 180, 551, 759, 888, 1178
AjuI GAANNNNNNNTTGG 2 cut(s) 929, 961
AluBI AGCT 5 cut(s) 632, 701, 872, 903, 1311
AluI AGCT 5 cut(s) 632, 701, 872, 903, 1311
Alw21I GWGCWC 1 cut(s) 601
Alw26I GTCTC 6 cut(s) 64, 284, 760, 1124, 1226, 1261
Alw44I GTGCAC 1 cut(s) 597
AlwI GGATC 2 cut(s) 530, 571
Ama87I CYCGRG 1 cut(s) 956
Aor13HI TCCGGA 1 cut(s) 286
AoxI GGCC 4 cut(s) 94, 168, 890, 1409
ApaLI GTGCAC 1 cut(s) 597
ApeKI GCWGC 3 cut(s) 80, 872, 1192
ApoI RAATTY 1 cut(s) 449
Asp700I GAANNNNTTC 1 cut(s) 1310
Asp718I GGTACC 1 cut(s) 1210
AspA2I CCTAGG 1 cut(s) 331
AspS9I GGNCC 6 cut(s) 336, 795, 851, 890, 1181, 1363
AsuC2I CCSGG 2 cut(s) 957, 958
AsuHPI GGTGA 1 cut(s) 238
AsuII TTCGAA 1 cut(s) 677
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 5 cut(s) 336, 795, 851, 1181, 1363
AvrII CCTAGG 1 cut(s) 331
AxyI CCTNAGG 1 cut(s) 846
BaeGI GKGCMC 2 cut(s) 601, 753
BaeI ACNNNNGTAYC 4 cut(s) 1194, 1194, 1227, 1227
BanI GGYRCC 2 cut(s) 748, 1210
BbrPI CACGTG 1 cut(s) 1121
BbsI GAAGAC 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 601
BbvI GCAGC 3 cut(s) 92, 859, 1179
BccI CCATC 4 cut(s) 160, 347, 433, 814
BceAI ACGGC 3 cut(s) 42, 240, 543
BcgI CGANNNNNNTGC 2 cut(s) 667, 701
BciVI GTATCC 1 cut(s) 25
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 2 cut(s) 957, 958
BcoDI GTCTC 6 cut(s) 64, 284, 760, 1124, 1226, 1261
BfaI CTAG 5 cut(s) 332, 378, 621, 633, 1049
BfmI CTRYAG 1 cut(s) 197
BfuAI ACCTGC 1 cut(s) 718
BfuI GTATCC 1 cut(s) 25
BisI GCNGC 5 cut(s) 72, 81, 171, 873, 1193
BlnI CCTAGG 1 cut(s) 331
BlsI GCNGC 5 cut(s) 73, 82, 172, 874, 1194
Bme1390I CCNGG 2 cut(s) 957, 958
Bme18I GGWCC 5 cut(s) 336, 795, 851, 1181, 1363
BmeT110I CYCGRG 1 cut(s) 956
BmgT120I GGNCC 6 cut(s) 336, 795, 851, 890, 1181, 1363
BmiI GGNNCC 9 cut(s) 70, 144, 337, 750, 796, 852, 891, 954, 1212
BmrFI CCNGG 2 cut(s) 957, 958
BmsI GCATC 3 cut(s) 223, 409, 550
BpiI GAAGAC 1 cut(s) 302
Bpu10I CCTNAGC 1 cut(s) 1413
Bpu14I TTCGAA 1 cut(s) 677
BpuEI CTTGAG 1 cut(s) 742
BpuMI CCSGG 2 cut(s) 957, 958
BsaAI YACGTR 1 cut(s) 1121
BsaHI GRCGYC 1 cut(s) 115
BsaI GGTCTC 2 cut(s) 64, 284
BsaJI CCNNGG 6 cut(s) 300, 331, 559, 956, 957, 1406
BsaWI WCCGGW 3 cut(s) 286, 415, 703
Bsc4I CCNNNNNNNGG 6 cut(s) 177, 180, 551, 759, 888, 1178
Bse118I RCCGGY 1 cut(s) 745
Bse21I CCTNAGG 1 cut(s) 846
BseAI TCCGGA 1 cut(s) 286
BseDI CCNNGG 6 cut(s) 300, 331, 559, 956, 957, 1406
BseGI GGATG 3 cut(s) 238, 541, 1087
BseLI CCNNNNNNNGG 6 cut(s) 177, 180, 551, 759, 888, 1178
BseMII CTCAG 2 cut(s) 105, 804
BseRI GAGGAG 2 cut(s) 958, 1115
BseSI GKGCMC 2 cut(s) 601, 753
BseXI GCAGC 3 cut(s) 92, 859, 1179
BshFI GGCC 4 cut(s) 96, 170, 892, 1411
BshNI GGYRCC 2 cut(s) 748, 1210
BsiHKAI GWGCWC 1 cut(s) 601
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 7 cut(s) 75, 287, 416, 569, 704, 746, 957
BslFI GGGAC 2 cut(s) 349, 808
BslI CCNNNNNNNGG 6 cut(s) 177, 180, 551, 759, 888, 1178
BsmAI GTCTC 6 cut(s) 64, 284, 760, 1124, 1226, 1261
BsmBI CGTCTC 1 cut(s) 760
BsmFI GGGAC 2 cut(s) 349, 808
BsmI GAATGC 1 cut(s) 811
BsnI GGCC 4 cut(s) 96, 170, 892, 1411
Bso31I GGTCTC 2 cut(s) 64, 284
BsoBI CYCGRG 1 cut(s) 956
Bsp119I TTCGAA 1 cut(s) 677
Bsp1286I GDGCHC 2 cut(s) 601, 753
Bsp13I TCCGGA 1 cut(s) 286
BspACI CCGC 6 cut(s) 72, 107, 171, 227, 743, 1078
BspANI GGCC 4 cut(s) 96, 170, 892, 1411
BspCNI CTCAG 2 cut(s) 104, 803
BspEI TCCGGA 1 cut(s) 286
BspLI GGNNCC 9 cut(s) 70, 144, 337, 750, 796, 852, 891, 954, 1212
BspMI ACCTGC 1 cut(s) 718
BspPI GGATC 2 cut(s) 530, 571
BspQI GCTCTTC 2 cut(s) 1107, 1301
BspT104I TTCGAA 1 cut(s) 677
BspT107I GGYRCC 2 cut(s) 748, 1210
BspTNI GGTCTC 2 cut(s) 64, 284
BsrFI RCCGGY 1 cut(s) 745
BssAI RCCGGY 1 cut(s) 745
BssECI CCNNGG 6 cut(s) 300, 331, 559, 956, 957, 1406
BssNI GRCGYC 1 cut(s) 115
BssT1I CCWWGG 2 cut(s) 300, 331
Bst4CI ACNGT 5 cut(s) 586, 603, 862, 1207, 1407
Bst6I CTCTTC 4 cut(s) 317, 1107, 1301, 1376
BstACI GRCGYC 1 cut(s) 115
BstBAI YACGTR 1 cut(s) 1121
BstBI TTCGAA 1 cut(s) 677
BstC8I GCNNGC 1 cut(s) 426
BstDEI CTNAG 5 cut(s) 91, 129, 790, 846, 1413
BstDSI CCRYGG 2 cut(s) 559, 1406
BstEII GGTNACC 1 cut(s) 608
BstF5I GGATG 3 cut(s) 238, 541, 1087
BstMAI GTCTC 6 cut(s) 64, 284, 760, 1124, 1226, 1261
BstMWI GCNNNNNNNGC 7 cut(s) 35, 77, 80, 167, 233, 538, 878
BstNSI RCATGY 1 cut(s) 1199
BstPI GGTNACC 1 cut(s) 608
BstSCI CCNGG 2 cut(s) 955, 956
BstSFI CTRYAG 1 cut(s) 197
BstSLI GKGCMC 2 cut(s) 601, 753
BstV1I GCAGC 3 cut(s) 92, 859, 1179
BstV2I GAAGAC 1 cut(s) 302
BstX2I RGATCY 1 cut(s) 522
BstYI RGATCY 1 cut(s) 522
Bsu36I CCTNAGG 1 cut(s) 846
BsuI GTATCC 1 cut(s) 25
BsuRI GGCC 4 cut(s) 96, 170, 892, 1411
BtgI CCRYGG 2 cut(s) 559, 1406
BtsCI GGATG 3 cut(s) 238, 541, 1087
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 2 cut(s) 36, 1212
BveI ACCTGC 1 cut(s) 718
Cac8I GCNNGC 1 cut(s) 426
Cfr10I RCCGGY 1 cut(s) 745
Cfr13I GGNCC 6 cut(s) 336, 795, 851, 890, 1181, 1363
Cfr9I CCCGGG 1 cut(s) 956
CseI GACGC 2 cut(s) 104, 798
Csp6I GTAC 2 cut(s) 88, 1211
CviAII CATG 8 cut(s) 98, 157, 175, 253, 316, 1053, 1196, 1367
CviQI GTAC 2 cut(s) 88, 1211
DdeI CTNAG 5 cut(s) 91, 129, 790, 846, 1413
EaeI YGGCCR 1 cut(s) 168
Eam1104I CTCTTC 4 cut(s) 317, 1107, 1301, 1376
EarI CTCTTC 4 cut(s) 317, 1107, 1301, 1376
EciI GGCGGA 2 cut(s) 242, 732
Eco130I CCWWGG 2 cut(s) 300, 331
Eco31I GGTCTC 2 cut(s) 64, 284
Eco47I GGWCC 5 cut(s) 336, 795, 851, 1181, 1363
Eco72I CACGTG 1 cut(s) 1121
Eco81I CCTNAGG 1 cut(s) 846
Eco88I CYCGRG 1 cut(s) 956
Eco91I GGTNACC 1 cut(s) 608
EcoO109I RGGNCCY 2 cut(s) 851, 890
EcoO65I GGTNACC 1 cut(s) 608
EcoT14I CCWWGG 2 cut(s) 300, 331
ErhI CCWWGG 2 cut(s) 300, 331
Esp3I CGTCTC 1 cut(s) 760
FaeI CATG 8 cut(s) 101, 160, 178, 256, 319, 1056, 1199, 1370
FalI AAGNNNNNCTT 6 cut(s) 47, 79, 417, 449, 1295, 1327
FaqI GGGAC 2 cut(s) 349, 808
FatI CATG 8 cut(s) 97, 156, 174, 252, 315, 1052, 1195, 1366
FauI CCCGC 1 cut(s) 1071
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 1 cut(s) 581
Fnu4HI GCNGC 5 cut(s) 72, 81, 171, 873, 1193
FokI GGATG 3 cut(s) 245, 528, 1094
Fsp4HI GCNGC 5 cut(s) 72, 81, 171, 873, 1193
FspBI CTAG 5 cut(s) 332, 378, 621, 633, 1049
GluI GCNGC 5 cut(s) 72, 81, 171, 873, 1193
HaeIII GGCC 4 cut(s) 96, 170, 892, 1411
HapII CCGG 7 cut(s) 75, 287, 416, 569, 704, 746, 957
HgaI GACGC 2 cut(s) 104, 798
Hin1I GRCGYC 1 cut(s) 115
Hin1II CATG 8 cut(s) 101, 160, 178, 256, 319, 1056, 1199, 1370
HincII GTYRAC 3 cut(s) 7, 486, 582
HindII GTYRAC 3 cut(s) 7, 486, 582
HinfI GANTC 7 cut(s) 387, 410, 679, 737, 1103, 1157, 1240
HpaI GTTAAC 1 cut(s) 486
HpaII CCGG 7 cut(s) 75, 287, 416, 569, 704, 746, 957
HphI GGTGA 1 cut(s) 238
Hpy166II GTNNAC 5 cut(s) 7, 486, 582, 599, 736
Hpy188III TCNNGA 5 cut(s) 18, 287, 407, 932, 1421
Hpy8I GTNNAC 5 cut(s) 7, 486, 582, 599, 736
Hpy99I CGWCG 2 cut(s) 88, 583
HpyAV CCTTC 3 cut(s) 206, 452, 931
HpyCH4III ACNGT 5 cut(s) 586, 603, 862, 1207, 1407
HpyCH4IV ACGT 2 cut(s) 86, 1120
HpyCH4V TGCA 7 cut(s) 236, 326, 599, 688, 709, 922, 1195
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 77, 80, 167, 233, 538, 878
HpyF3I CTNAG 5 cut(s) 91, 129, 790, 846, 1413
HpySE526I ACGT 2 cut(s) 86, 1120
Hsp92I GRCGYC 1 cut(s) 115
Hsp92II CATG 8 cut(s) 101, 160, 178, 256, 319, 1056, 1199, 1370
Kpn2I TCCGGA 1 cut(s) 286
KpnI GGTACC 1 cut(s) 1214
Ksp22I TGATCA 1 cut(s) 928
KspAI GTTAAC 1 cut(s) 486
LguI GCTCTTC 2 cut(s) 1107, 1301
LmnI GCTCC 4 cut(s) 68, 77, 706, 900
Lsp1109I GCAGC 3 cut(s) 92, 859, 1179
LweI GCATC 3 cut(s) 223, 409, 550
MaeI CTAG 5 cut(s) 332, 378, 621, 633, 1049
MaeII ACGT 2 cut(s) 86, 1120
MaeIII GTNAC 3 cut(s) 608, 905, 995
MflI RGATCY 1 cut(s) 522
MhlI GDGCHC 2 cut(s) 601, 753
MluCI AATT 7 cut(s) 190, 393, 449, 915, 1251, 1340, 1349
MlyI GAGTC 2 cut(s) 731, 1112
MmeI TCCRAC 3 cut(s) 500, 881, 1244
MroI TCCGGA 1 cut(s) 286
MroXI GAANNNNTTC 1 cut(s) 1310
MseI TTAA 2 cut(s) 485, 1148
MslI CAYNNNNRTG 2 cut(s) 102, 251
MspI CCGG 7 cut(s) 75, 287, 416, 569, 704, 746, 957
MspR9I CCNGG 2 cut(s) 957, 958
Mva1269I GAATGC 1 cut(s) 811
MwoI GCNNNNNNNGC 7 cut(s) 35, 77, 80, 167, 233, 538, 878
NciI CCSGG 2 cut(s) 957, 958
NlaIII CATG 8 cut(s) 101, 160, 178, 256, 319, 1056, 1199, 1370
NlaIV GGNNCC 9 cut(s) 70, 144, 337, 750, 796, 852, 891, 954, 1212
NmuCI GTSAC 1 cut(s) 905
NspI RCATGY 1 cut(s) 1199
NspV TTCGAA 1 cut(s) 677
PaqCI CACCTGC 1 cut(s) 718
PciSI GCTCTTC 2 cut(s) 1107, 1301
PctI GAATGC 1 cut(s) 811
PdmI GAANNNNTTC 1 cut(s) 1310
PfeI GAWTC 5 cut(s) 387, 410, 679, 1157, 1240
PkrI GCNGC 5 cut(s) 73, 82, 172, 874, 1194
PleI GAGTC 2 cut(s) 731, 1111
PmaCI CACGTG 1 cut(s) 1121
PmlI CACGTG 1 cut(s) 1121
PpsI GAGTC 2 cut(s) 731, 1111
Ppu21I YACGTR 1 cut(s) 1121
PpuMI RGGWCCY 1 cut(s) 851
Psp5II RGGWCCY 1 cut(s) 851
PspCI CACGTG 1 cut(s) 1121
PspEI GGTNACC 1 cut(s) 608
PspN4I GGNNCC 9 cut(s) 70, 144, 337, 750, 796, 852, 891, 954, 1212
PspPI GGNCC 6 cut(s) 336, 795, 851, 890, 1181, 1363
PspPPI RGGWCCY 1 cut(s) 851
PsuI RGATCY 1 cut(s) 522
RsaI GTAC 2 cut(s) 89, 1212
RsaNI GTAC 2 cut(s) 88, 1211
RseI CAYNNNNRTG 2 cut(s) 102, 251
SalI GTCGAC 1 cut(s) 580
SapI GCTCTTC 2 cut(s) 1107, 1301
SaqAI TTAA 2 cut(s) 485, 1148
SatI GCNGC 5 cut(s) 72, 81, 171, 873, 1193
Sau96I GGNCC 6 cut(s) 336, 795, 851, 890, 1181, 1363
SchI GAGTC 2 cut(s) 731, 1112
ScrFI CCNGG 2 cut(s) 957, 958
SduI GDGCHC 2 cut(s) 601, 753
SfaNI GCATC 3 cut(s) 223, 409, 550
SfcI CTRYAG 1 cut(s) 197
SfuI TTCGAA 1 cut(s) 677
SgrAI CRCCGGYG 1 cut(s) 745
SinI GGWCC 5 cut(s) 336, 795, 851, 1181, 1363
SmaI CCCGGG 1 cut(s) 958
SmiMI CAYNNNNRTG 2 cut(s) 102, 251
SmlI CTYRAG 1 cut(s) 757
SmoI CTYRAG 1 cut(s) 757
Sse9I AATT 7 cut(s) 190, 393, 449, 915, 1251, 1340, 1349
SsiI CCGC 6 cut(s) 72, 107, 171, 227, 743, 1078
SspI AATATT 1 cut(s) 670
SspMI CTAG 5 cut(s) 332, 378, 621, 633, 1049
StyD4I CCNGG 2 cut(s) 955, 956
StyI CCWWGG 2 cut(s) 300, 331
TaaI ACNGT 5 cut(s) 586, 603, 862, 1207, 1407
TaiI ACGT 2 cut(s) 89, 1123
TaqI TCGA 3 cut(s) 581, 677, 1401
TaqII GACCGA 1 cut(s) 266
TasI AATT 7 cut(s) 190, 393, 449, 915, 1251, 1340, 1349
TauI GCSGC 2 cut(s) 74, 173
TfiI GAWTC 5 cut(s) 387, 410, 679, 1157, 1240
Tru1I TTAA 2 cut(s) 485, 1148
Tru9I TTAA 2 cut(s) 485, 1148
TscAI CASTG 2 cut(s) 36, 1212
TseFI GTSAC 1 cut(s) 905
TseI GCWGC 3 cut(s) 80, 872, 1192
Tsp45I GTSAC 1 cut(s) 905
TspDTI ATGAA 6 cut(s) 145, 304, 1098, 1125, 1303, 1383
TspMI CCCGGG 1 cut(s) 956
TspRI CASTG 2 cut(s) 36, 1212
VneI GTGCAC 1 cut(s) 597
VpaK11BI GGWCC 5 cut(s) 336, 795, 851, 1181, 1363
XapI RAATTY 1 cut(s) 449
XceI RCATGY 1 cut(s) 1199
XcmI CCANNNNNNNNNTGG 1 cut(s) 883
XmaI CCCGGG 1 cut(s) 956
XmaJI CCTAGG 1 cut(s) 331
XmiI GTMKAC 1 cut(s) 581
XmnI GAANNNNTTC 1 cut(s) 1310
XspI CTAG 5 cut(s) 332, 378, 621, 633, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.