Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004143.1

Orthogroup ID

OG0000109

Physical Location & Seq

Genomic Coordinates Reverse (-)

62764 .. 65759

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004143.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

atggttgccgtgaagaaaacgaagaagacccatgagagcatcaacaacaggctggctctcgtcatgaagagtggcaaatacactctcggttacaaaaccgtcatcgactctcttcgcagctccaaagggaagctgatcataatctccaacaactgcccccctctccgcaagtccgagatcgaatactacgccatgcttgccaaggttggggtccaccactacaatggaaacaatgttgatctggggacagcatgtggaaagtacttccgtgtttcatgcctcagcattattgatccaggtgattcggatattatcaagtcgctgcctggtgatcattccttgattttggttatgataggtcatctaagcaactcctgtgacaatcagcctgtcctatttgctgtgctaaaatttgtgcttatgttatttgtcatctgggattgggttttcgcaaagctatatttgaagatgggtttctctggtattgtatgtgacaatttggtcatagtagagttgcctaacagtgcctttctttatccagctgctatccaggcaactggtgttataatcctaggtttcaaatcccttcatgacaacgccctcatcttttacgtttatgttgcccggtatatctgcataagaacttgccatgcaccatcgattctgaaaatctgtgatggccagtgcactggtcaaggaagcagtggctcttgcctgcagtgctctaacagaaacgccggcgctggccgggcagggaagttgttggtctcccctctgaaaaagaggaaggtttggcggcctgttggggctaaaaataagcatcaggtggtagatgataacccatggaagctcgaatatgcggcatcgaagaaggtgaagaggtgcaagttctctaatgtgcaacggtctccggatatggatgacgagctagctggtcttctctggtggcgggtgacttggcaatggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0019538 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L7Ae

Protein Analysis

322

Amino Acids

35.89

Weight (kDa)

9.5

Isoelectric Point (pI)

37.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000109)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis	RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata	RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora	Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii	Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa	Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha	Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana	Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
AasI	GACNNNNNNGTC	1 cut(s)	500
AccIII	TCCGGA	1 cut(s)	910
AciI	CCGC	4 cut(s)	166, 796, 860, 949
AclWI	GGATC	1 cut(s)	287
AcoI	YGGCCR	2 cut(s)	679, 745
AcsI	RAATTY	1 cut(s)	410
AfaI	GTAC	1 cut(s)	263
AfiI	CCNNNNNNNGG	1 cut(s)	207
AgsI	TTSAA	2 cut(s)	466, 580
AjnI	CCWGG	3 cut(s)	295, 325, 549
AluBI	AGCT	7 cut(s)	120, 133, 457, 542, 850, 928, 932
AluI	AGCT	7 cut(s)	120, 133, 457, 542, 850, 928, 932
Alw21I	GWGCWC	2 cut(s)	689, 725
Alw26I	GTCTC	2 cut(s)	772, 912
Alw44I	GTGCAC	1 cut(s)	685
AlwI	GGATC	1 cut(s)	287
Aor13HI	TCCGGA	1 cut(s)	910
AoxI	GGCC	3 cut(s)	679, 745, 797
ApaLI	GTGCAC	1 cut(s)	685
ApeKI	GCWGC	3 cut(s)	117, 322, 542
ApoI	RAATTY	1 cut(s)	410
AspA2I	CCTAGG	1 cut(s)	571
AspLEI	GCGC	1 cut(s)	743
AspS9I	GGNCC	1 cut(s)	211
AsuC2I	CCSGG	2 cut(s)	625, 749
AsuHPI	GGTGA	4 cut(s)	311, 341, 886, 964
AsuNHI	GCTAGC	1 cut(s)	928
AvaII	GGWCC	1 cut(s)	211
AvrII	CCTAGG	1 cut(s)	571
BaeGI	GKGCMC	1 cut(s)	689
BalI	TGGCCA	1 cut(s)	681
BbsI	GAAGAC	2 cut(s)	32, 929
Bbv12I	GWGCWC	2 cut(s)	689, 725
BbvCI	CCTCAGC	1 cut(s)	281
BbvI	GCAGC	3 cut(s)	129, 309, 529
BccI	CCATC	3 cut(s)	463, 664, 671
BciT130I	CCWGG	3 cut(s)	297, 327, 551
BclI	TGATCA	2 cut(s)	135, 331
BcnI	CCSGG	2 cut(s)	625, 749
BcoDI	GTCTC	2 cut(s)	772, 912
BfaI	CTAG	2 cut(s)	572, 929
BfmI	CTRYAG	1 cut(s)	716
BfoI	RGCGCY	1 cut(s)	744
BisI	GCNGC	5 cut(s)	118, 323, 543, 797, 861
BlnI	CCTAGG	1 cut(s)	571
BlsI	GCNGC	5 cut(s)	119, 324, 544, 798, 862
BmcAI	AGTACT	1 cut(s)	263
Bme1390I	CCNGG	5 cut(s)	297, 327, 551, 625, 749
Bme18I	GGWCC	1 cut(s)	211
BmgT120I	GGNCC	1 cut(s)	211
BmiI	GGNNCC	1 cut(s)	212
BmrFI	CCNGG	5 cut(s)	297, 327, 551, 625, 749
BmsI	GCATC	3 cut(s)	48, 829, 872
BmtI	GCTAGC	1 cut(s)	932
BpiI	GAAGAC	2 cut(s)	32, 929
Bpu10I	CCTNAGC	1 cut(s)	281
BpuMI	CCSGG	2 cut(s)	625, 749
Bsa29I	ATCGAT	1 cut(s)	659
BsaBI	GATNNNNATC	1 cut(s)	140
BsaI	GGTCTC	2 cut(s)	772, 912
BsaJI	CCNNGG	3 cut(s)	201, 571, 842
BsaWI	WCCGGW	1 cut(s)	910
Bsc4I	CCNNNNNNNGG	1 cut(s)	207
Bse118I	RCCGGY	1 cut(s)	737
Bse1I	ACTGG	3 cut(s)	562, 682, 694
Bse3DI	GCAATG	1 cut(s)	968
Bse8I	GATNNNNATC	1 cut(s)	140
BseAI	TCCGGA	1 cut(s)	910
BseBI	CCWGG	3 cut(s)	297, 327, 551
BseCI	ATCGAT	1 cut(s)	659
BseDI	CCNNGG	3 cut(s)	201, 571, 842
BseGI	GGATG	1 cut(s)	925
BseJI	GATNNNNATC	1 cut(s)	140
BseLI	CCNNNNNNNGG	1 cut(s)	207
BseMI	GCAATG	1 cut(s)	968
BseMII	CTCAG	1 cut(s)	295
BseNI	ACTGG	3 cut(s)	562, 682, 694
BseSI	GKGCMC	1 cut(s)	689
BseXI	GCAGC	3 cut(s)	129, 309, 529
BshFI	GGCC	3 cut(s)	681, 747, 799
BshVI	ATCGAT	1 cut(s)	659
BsiHKAI	GWGCWC	2 cut(s)	689, 725
BsiSI	CCGG	4 cut(s)	625, 738, 748, 911
BslFI	GGGAC	1 cut(s)	259
BslI	CCNNNNNNNGG	1 cut(s)	207
BsmAI	GTCTC	2 cut(s)	772, 912
BsmFI	GGGAC	1 cut(s)	259
BsnI	GGCC	3 cut(s)	681, 747, 799
Bso31I	GGTCTC	2 cut(s)	772, 912
Bsp1286I	GDGCHC	2 cut(s)	689, 725
Bsp13I	TCCGGA	1 cut(s)	910
Bsp143I	GATC	5 cut(s)	135, 177, 238, 292, 331
Bsp19I	CCATGG	1 cut(s)	842
BspACI	CCGC	4 cut(s)	166, 796, 860, 949
BspANI	GGCC	3 cut(s)	681, 747, 799
BspCNI	CTCAG	1 cut(s)	294
BspDI	ATCGAT	1 cut(s)	659
BspEI	TCCGGA	1 cut(s)	910
BspHI	TCATGA	2 cut(s)	63, 589
BspLI	GGNNCC	1 cut(s)	212
BspMAI	CTGCAG	1 cut(s)	720
BspOI	GCTAGC	1 cut(s)	932
BspPI	GGATC	1 cut(s)	287
BspTNI	GGTCTC	2 cut(s)	772, 912
BsrDI	GCAATG	1 cut(s)	968
BsrFI	RCCGGY	1 cut(s)	737
BsrI	ACTGG	3 cut(s)	562, 682, 694
BssAI	RCCGGY	1 cut(s)	737
BssECI	CCNNGG	3 cut(s)	201, 571, 842
BssMI	GATC	5 cut(s)	135, 177, 238, 292, 331
BssT1I	CCWWGG	3 cut(s)	201, 571, 842
Bst2UI	CCWGG	3 cut(s)	297, 327, 551
Bst4CI	ACNGT	3 cut(s)	100, 524, 906
Bst6I	CTCTTC	3 cut(s)	62, 117, 872
BstC8I	GCNNGC	6 cut(s)	54, 198, 716, 739, 745, 930
BstDEI	CTNAG	2 cut(s)	281, 365
BstDSI	CCRYGG	1 cut(s)	842
BstF5I	GGATG	1 cut(s)	925
BstH2I	RGCGCY	1 cut(s)	744
BstHHI	GCGC	1 cut(s)	743
BstKTI	GATC	5 cut(s)	138, 180, 241, 295, 334
BstMAI	GTCTC	2 cut(s)	772, 912
BstMBI	GATC	5 cut(s)	135, 177, 238, 292, 331
BstMWI	GCNNNNNNNGC	4 cut(s)	197, 551, 720, 749
BstNI	CCWGG	3 cut(s)	297, 327, 551
BstNSI	RCATGY	1 cut(s)	255
BstSCI	CCNGG	5 cut(s)	295, 325, 549, 623, 747
BstSFI	CTRYAG	1 cut(s)	716
BstSLI	GKGCMC	1 cut(s)	689
BstV1I	GCAGC	3 cut(s)	129, 309, 529
BstV2I	GAAGAC	2 cut(s)	32, 929
BstXI	CCANNNNNNTGG	3 cut(s)	224, 557, 689
Bsu15I	ATCGAT	1 cut(s)	659
BsuRI	GGCC	3 cut(s)	681, 747, 799
BsuTUI	ATCGAT	1 cut(s)	659
BtgI	CCRYGG	1 cut(s)	842
BtsCI	GGATG	1 cut(s)	925
BtsI	GCAGTG	2 cut(s)	709, 725
BtsIMutI	CAGTG	5 cut(s)	529, 687, 689, 709, 725
Cac8I	GCNNGC	6 cut(s)	54, 198, 716, 739, 745, 930
CciI	TCATGA	2 cut(s)	63, 589
CfoI	GCGC	1 cut(s)	743
Cfr10I	RCCGGY	1 cut(s)	737
Cfr13I	GGNCC	1 cut(s)	211
ClaI	ATCGAT	1 cut(s)	659
Csp6I	GTAC	1 cut(s)	262
CviAII	CATG	8 cut(s)	32, 64, 193, 252, 276, 590, 650, 843
CviQI	GTAC	1 cut(s)	262
DdeI	CTNAG	2 cut(s)	281, 365
DpnI	GATC	5 cut(s)	137, 179, 240, 294, 333
DpnII	GATC	5 cut(s)	135, 177, 238, 292, 331
DrdI	GACNNNNNNGTC	1 cut(s)	500
DseDI	GACNNNNNNGTC	1 cut(s)	500
EaeI	YGGCCR	2 cut(s)	679, 745
Eam1104I	CTCTTC	3 cut(s)	62, 117, 872
EarI	CTCTTC	3 cut(s)	62, 117, 872
Eco130I	CCWWGG	3 cut(s)	201, 571, 842
Eco31I	GGTCTC	2 cut(s)	772, 912
Eco47I	GGWCC	1 cut(s)	211
EcoRII	CCWGG	3 cut(s)	295, 325, 549
EcoT14I	CCWWGG	3 cut(s)	201, 571, 842
ErhI	CCWWGG	3 cut(s)	201, 571, 842
FaeI	CATG	8 cut(s)	35, 67, 196, 255, 279, 593, 653, 846
FaqI	GGGAC	1 cut(s)	259
FatI	CATG	8 cut(s)	31, 63, 192, 251, 275, 589, 649, 842
FauI	CCCGC	1 cut(s)	942
FbaI	TGATCA	2 cut(s)	135, 331
Fnu4HI	GCNGC	5 cut(s)	118, 323, 543, 797, 861
FokI	GGATG	1 cut(s)	932
Fsp4HI	GCNGC	5 cut(s)	118, 323, 543, 797, 861
FspBI	CTAG	2 cut(s)	572, 929
GlaI	GCGC	1 cut(s)	742
GluI	GCNGC	5 cut(s)	118, 323, 543, 797, 861
HaeII	RGCGCY	1 cut(s)	744
HaeIII	GGCC	3 cut(s)	681, 747, 799
HapII	CCGG	4 cut(s)	625, 738, 748, 911
HhaI	GCGC	1 cut(s)	743
Hin1II	CATG	8 cut(s)	35, 67, 196, 255, 279, 593, 653, 846
Hin6I	GCGC	1 cut(s)	741
HinP1I	GCGC	1 cut(s)	741
HinfI	GANTC	3 cut(s)	107, 302, 661
HpaII	CCGG	4 cut(s)	625, 738, 748, 911
HphI	GGTGA	4 cut(s)	311, 341, 886, 964
Hpy166II	GTNNAC	2 cut(s)	214, 687
Hpy188I	TCNGA	4 cut(s)	175, 307, 666, 777
Hpy188III	TCNNGA	3 cut(s)	64, 590, 911
Hpy8I	GTNNAC	2 cut(s)	214, 687
HpyAV	CCTTC	3 cut(s)	596, 781, 865
HpyCH4III	ACNGT	3 cut(s)	100, 524, 906
HpyCH4IV	ACGT	1 cut(s)	612
HpyCH4V	TGCA	6 cut(s)	636, 653, 687, 718, 885, 901
HpyF10VI	GCNNNNNNNGC	4 cut(s)	197, 551, 720, 749
HpyF3I	CTNAG	2 cut(s)	281, 365
HpySE526I	ACGT	1 cut(s)	612
Hsp92II	CATG	8 cut(s)	35, 67, 196, 255, 279, 593, 653, 846
HspAI	GCGC	1 cut(s)	741
Kpn2I	TCCGGA	1 cut(s)	910
KroI	GCCGGC	1 cut(s)	737
KroNI	GCCGGC	1 cut(s)	739
Ksp22I	TGATCA	2 cut(s)	135, 331
Kzo9I	GATC	5 cut(s)	135, 177, 238, 292, 331
LmnI	GCTCC	1 cut(s)	125
Lsp1109I	GCAGC	3 cut(s)	129, 309, 529
LweI	GCATC	3 cut(s)	48, 829, 872
MaeI	CTAG	2 cut(s)	572, 929
MaeII	ACGT	1 cut(s)	612
MaeIII	GTNAC	4 cut(s)	89, 377, 491, 952
MalI	GATC	5 cut(s)	137, 179, 240, 294, 333
MboI	GATC	5 cut(s)	135, 177, 238, 292, 331
MboII	GAAGA	9 cut(s)	25, 34, 37, 79, 104, 478, 880, 889, 929
MhlI	GDGCHC	2 cut(s)	689, 725
MlsI	TGGCCA	1 cut(s)	681
MluCI	AATT	2 cut(s)	410, 496
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	1 cut(s)	101
MmeI	TCCRAC	1 cut(s)	171
MnlI	CCTC	6 cut(s)	171, 290, 611, 777, 783, 873
Mox20I	TGGCCA	1 cut(s)	681
MreI	CGCCGGCG	1 cut(s)	737
MroI	TCCGGA	1 cut(s)	910
MroNI	GCCGGC	1 cut(s)	737
MscI	TGGCCA	1 cut(s)	681
MslI	CAYNNNNRTG	1 cut(s)	222
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	1 cut(s)	542
MspI	CCGG	4 cut(s)	625, 738, 748, 911
MspR9I	CCNGG	5 cut(s)	297, 327, 551, 625, 749
MvaI	CCWGG	3 cut(s)	297, 327, 551
MwoI	GCNNNNNNNGC	4 cut(s)	197, 551, 720, 749
NaeI	GCCGGC	1 cut(s)	739
NciI	CCSGG	2 cut(s)	625, 749
NcoI	CCATGG	1 cut(s)	842
NdeII	GATC	5 cut(s)	135, 177, 238, 292, 331
NgoMIV	GCCGGC	1 cut(s)	737
NheI	GCTAGC	1 cut(s)	928
NlaIII	CATG	8 cut(s)	35, 67, 196, 255, 279, 593, 653, 846
NlaIV	GGNNCC	1 cut(s)	212
NmuCI	GTSAC	3 cut(s)	377, 491, 952
NspI	RCATGY	1 cut(s)	255
PagI	TCATGA	2 cut(s)	63, 589
PdiI	GCCGGC	1 cut(s)	739
PfeI	GAWTC	2 cut(s)	302, 661
PkrI	GCNGC	5 cut(s)	119, 324, 544, 798, 862
PleI	GAGTC	1 cut(s)	101
PpsI	GAGTC	1 cut(s)	101
PsiI	TTATAA	1 cut(s)	566
Psp6I	CCWGG	3 cut(s)	295, 325, 549
PspGI	CCWGG	3 cut(s)	295, 325, 549
PspN4I	GGNNCC	1 cut(s)	212
PspPI	GGNCC	1 cut(s)	211
PstI	CTGCAG	1 cut(s)	720
PvuII	CAGCTG	1 cut(s)	542
RsaI	GTAC	1 cut(s)	263
RsaNI	GTAC	1 cut(s)	262
RseI	CAYNNNNRTG	1 cut(s)	222
SatI	GCNGC	5 cut(s)	118, 323, 543, 797, 861
Sau3AI	GATC	5 cut(s)	135, 177, 238, 292, 331
Sau96I	GGNCC	1 cut(s)	211
ScaI	AGTACT	1 cut(s)	263
SchI	GAGTC	1 cut(s)	101
ScrFI	CCNGG	5 cut(s)	297, 327, 551, 625, 749
SduI	GDGCHC	2 cut(s)	689, 725
SfaNI	GCATC	3 cut(s)	48, 829, 872
SfcI	CTRYAG	1 cut(s)	716
SgrAI	CRCCGGYG	1 cut(s)	737
SinI	GGWCC	1 cut(s)	211
SmiMI	CAYNNNNRTG	1 cut(s)	222
Sse9I	AATT	2 cut(s)	410, 496
SsiI	CCGC	4 cut(s)	166, 796, 860, 949
SspMI	CTAG	2 cut(s)	572, 929
StyD4I	CCNGG	5 cut(s)	295, 325, 549, 623, 747
StyI	CCWWGG	3 cut(s)	201, 571, 842
TaaI	ACNGT	3 cut(s)	100, 524, 906
TaiI	ACGT	1 cut(s)	615
TaqI	TCGA	5 cut(s)	105, 180, 659, 852, 866
TasI	AATT	2 cut(s)	410, 496
TatI	WGTACW	1 cut(s)	261
TauI	GCSGC	2 cut(s)	799, 863
TfiI	GAWTC	2 cut(s)	302, 661
TscAI	CASTG	5 cut(s)	529, 689, 694, 709, 725
TseFI	GTSAC	3 cut(s)	377, 491, 952
TseI	GCWGC	3 cut(s)	117, 322, 542
Tsp45I	GTSAC	3 cut(s)	377, 491, 952
TspDTI	ATGAA	3 cut(s)	80, 264, 578
TspGWI	ACGGA	1 cut(s)	257
TspRI	CASTG	5 cut(s)	529, 689, 694, 709, 725
VneI	GTGCAC	1 cut(s)	685
VpaK11BI	GGWCC	1 cut(s)	211
XapI	RAATTY	1 cut(s)	410
XceI	RCATGY	1 cut(s)	255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	221
XmaJI	CCTAGG	1 cut(s)	571
XspI	CTAG	2 cut(s)	572, 929
ZrmI	AGTACT	1 cut(s)	263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.