FvH4_3g34441

Rho (Ras homology) subfamily of Ras-like small GTPases

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000109
Physical Location & Seq
Reverse (-)
29894922 .. 29896437
1516 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g34441.t1

Sequence Viewer

Length: 1281 bp
ATGTCTGACGAGGTTTCCTCTCGGTTCGCTGCAACCCTTGTTATCTATGAGGGTGGCTCCTCTTCCGGTGTTGTAGCACGCCCTAGCGCCGCTTCTGTGCCTTGTTTCGCAGTCGGGCGTTTGCTGTCCTTGAAGAGAAGGCTGCCGAAACCTAAGGCGGTCATCGGCACTCTAACCGCCATATGGGATTACCAAAACCGCCTTCAGATGAGATTGTTGGGCGATCATTACCTTCTCAAGTTCTCCAGAGCCGATGAATGTCGTCATGTACTGCATAGTGGTCAGTGGTTCTTCGGTCGTTCTCCCTTCATCACGTCAGACTATGACGGATTGTCAGAGATTGATGTTGTTCCGTTCTCTTCCTTCCTTGATCCGGTAAGGGAGGCTTTCCCTCCGATGGTTTTTGAGTTCGATCTAGGGGATACCATTGCCAAGGTGAAGCTCTCCTTCAAGTATGAGCGTACTGTAGAGAGGATTAGCTTGGTCCCGGATCGAAGTCACGAGGTTTCCGGTCGTATTGCTACAGGTTTGGTGTCTGCCCTAAACCCTAACTCTAGGTTCGGTAAGGGTTTAGGGTTTGATTTCTCAGTGAACAGAATCAATCAATTCTCGTCTACTGCTCTGATCAACCCTTTCCAAAGAATAGGTAGCTTGTCCTCGGGCTCATCTTCGATGCAGACTGTTGGGCAGCCTGGTGTCACGTTCTCTTTGCCAGGTGTTTCGGTGACGGACTTGGTAGTGCAGCTTGCTAGGTTCAAGTCCATCCCTTCTATTGTTGAGGCGGTCATTCCTCCATTGGCATTTCCCCCAGTGATCCAGATCCCATCTTCGGTTTTGGAGCCGATTCTGGGAGTCAAACGTGATGCTGACTTGACTTTGGTTCCGCTTGGGAAGAAAGCTCGCAACACTTATGAACCCAGGAAGGTAATTCCCTATGAACCTTCCTTTATGCTTGAGATGTTTTTGGCTTTTGAGGATGGGAAGATCAAAGTATCTCCTGCTAAGAAGAAGAAGGTGGGCAAACTTCTTGGCTCCAAGAACAAGAAGAGGGTTGTGGATGTTCGTCCTTGGAAATTGGGTGTCATTGCTGGTGGCCCTAAAAAAGCCAAGAAACGTAGGTTCGTTGCTCGCCGGAATTTGCAGCTGGGTGAGTCTTCTAGGGGCTCTGGTAGCTCTAGTGGTGGTGTGGAATTTGAGATGACTTCAGATGTGGTGTTGAGTGAGGCATTAGATGATGCATATGACTCTGTTCTCCAATCCGAGGAGGCCCCTTTTGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632 Ras

Protein Analysis

427

Amino Acids

46.59

Weight (kDa)

9.71

Isoelectric Point (pI)

46.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 38 - 107 1.8e-06 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 614
AciI CCGC 6 cut(s) 90, 158, 177, 199, 782, 884
AclWI GGATC 4 cut(s) 365, 498, 808, 814
AcsI RAATTY 2 cut(s) 1135, 1190
AcuI CTGAAG 2 cut(s) 188, 1188
AfaI GTAC 2 cut(s) 270, 463
AfiI CCNNNNNNNGG 6 cut(s) 183, 373, 397, 829, 848, 1261
AgsI TTSAA 3 cut(s) 133, 451, 757
AhdI GACNNNNNGTC 1 cut(s) 331
AjiI CACGTC 1 cut(s) 315
AjnI CCWGG 3 cut(s) 691, 712, 917
AjuI GAANNNNNNNTTGG 2 cut(s) 186, 218
AluBI AGCT 7 cut(s) 442, 480, 651, 745, 899, 1144, 1173
AluI AGCT 7 cut(s) 442, 480, 651, 745, 899, 1144, 1173
AlwI GGATC 4 cut(s) 365, 498, 808, 814
Ama87I CYCGRG 1 cut(s) 658
AoxI GGCC 2 cut(s) 1093, 1266
ApeKI GCWGC 5 cut(s) 29, 142, 688, 742, 1141
ApoI RAATTY 2 cut(s) 1135, 1190
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 3 cut(s) 484, 1094, 1267
AsuC2I CCSGG 1 cut(s) 488
AsuHPI GGTGA 3 cut(s) 448, 736, 1160
AvaI CYCGRG 1 cut(s) 658
AvaII GGWCC 1 cut(s) 484
AxyI CCTNAGG 1 cut(s) 153
BanII GRGCYC 2 cut(s) 665, 1166
BauI CACGAG 1 cut(s) 500
BbsI GAAGAC 1 cut(s) 1146
BbvI GCAGC 5 cut(s) 16, 129, 700, 754, 1153
BccI CCATC 4 cut(s) 391, 770, 832, 971
BciT130I CCWGG 3 cut(s) 693, 714, 919
BciVI GTATCC 1 cut(s) 415
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 1 cut(s) 488
BfaI CTAG 6 cut(s) 84, 416, 555, 750, 1158, 1176
BfmI CTRYAG 2 cut(s) 465, 522
BfoI RGCGCY 1 cut(s) 90
BfuI GTATCC 1 cut(s) 415
BisI GCNGC 6 cut(s) 30, 90, 143, 689, 743, 1142
BlsI GCNGC 6 cut(s) 31, 91, 144, 690, 744, 1143
Bme1390I CCNGG 4 cut(s) 488, 693, 714, 919
Bme18I GGWCC 1 cut(s) 484
BmeRI GACNNNNNGTC 1 cut(s) 331
BmeT110I CYCGRG 1 cut(s) 658
BmgBI CACGTC 1 cut(s) 315
BmgT120I GGNCC 3 cut(s) 484, 1094, 1267
BmiI GGNNCC 6 cut(s) 58, 486, 840, 882, 1033, 1269
BmrFI CCNGG 4 cut(s) 488, 693, 714, 919
BmrI ACTGGG 1 cut(s) 803
BmsI GCATC 3 cut(s) 663, 853, 1225
BmuI ACTGGG 1 cut(s) 803
BpiI GAAGAC 1 cut(s) 1146
BplI GAGNNNNNCTC 3 cut(s) 34, 41, 73
BpmI CTGGAG 1 cut(s) 229
BpuEI CTTGAG 2 cut(s) 221, 974
BpuMI CCSGG 1 cut(s) 488
BsaBI GATNNNNATC 1 cut(s) 818
BsaJI CCNNGG 5 cut(s) 432, 657, 917, 1067, 1260
BsaWI WCCGGW 3 cut(s) 65, 373, 509
Bsc4I CCNNNNNNNGG 6 cut(s) 183, 373, 397, 829, 848, 1261
Bse1I ACTGG 1 cut(s) 809
Bse21I CCTNAGG 1 cut(s) 153
Bse3DI GCAATG 2 cut(s) 426, 1083
Bse8I GATNNNNATC 1 cut(s) 818
BseBI CCWGG 3 cut(s) 693, 714, 919
BseDI CCNNGG 5 cut(s) 432, 657, 917, 1067, 1260
BseGI GGATG 3 cut(s) 762, 982, 1063
BseJI GATNNNNATC 1 cut(s) 818
BseLI CCNNNNNNNGG 6 cut(s) 183, 373, 397, 829, 848, 1261
BseMI GCAATG 2 cut(s) 426, 1083
BseMII CTCAG 1 cut(s) 600
BseNI ACTGG 1 cut(s) 809
BseRI GAGGAG 2 cut(s) 49, 1277
BseXI GCAGC 5 cut(s) 16, 129, 700, 754, 1153
BseYI CCCAGC 1 cut(s) 1144
BsgI GTGCAG 1 cut(s) 761
Bsh1285I CGRYCG 2 cut(s) 298, 514
BshFI GGCC 2 cut(s) 1095, 1268
BsiEI CGRYCG 2 cut(s) 298, 514
BsiHKCI CYCGRG 1 cut(s) 658
BsiSI CCGG 5 cut(s) 66, 374, 488, 510, 1132
BslFI GGGAC 1 cut(s) 470
BslI CCNNNNNNNGG 6 cut(s) 183, 373, 397, 829, 848, 1261
BsmFI GGGAC 1 cut(s) 470
BsnI GGCC 2 cut(s) 1095, 1268
BsoBI CYCGRG 1 cut(s) 658
Bsp1286I GDGCHC 2 cut(s) 665, 1166
Bsp143I GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
BspACI CCGC 6 cut(s) 90, 158, 177, 199, 782, 884
BspANI GGCC 2 cut(s) 1095, 1268
BspCNI CTCAG 1 cut(s) 599
BspLI GGNNCC 6 cut(s) 58, 486, 840, 882, 1033, 1269
BspPI GGATC 4 cut(s) 365, 498, 808, 814
BsrDI GCAATG 2 cut(s) 426, 1083
BsrI ACTGG 1 cut(s) 809
BssECI CCNNGG 5 cut(s) 432, 657, 917, 1067, 1260
BssMI GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
BssSI CACGAG 1 cut(s) 500
BssT1I CCWWGG 2 cut(s) 432, 1067
Bst2BI CACGAG 1 cut(s) 500
Bst2UI CCWGG 3 cut(s) 693, 714, 919
Bst4CI ACNGT 2 cut(s) 466, 682
Bst6I CTCTTC 4 cut(s) 67, 128, 364, 1040
BstC8I GCNNGC 4 cut(s) 79, 747, 901, 1129
BstDEI CTNAG 3 cut(s) 153, 586, 1002
BstF5I GGATG 3 cut(s) 762, 982, 1063
BstH2I RGCGCY 1 cut(s) 90
BstHHI GCGC 1 cut(s) 89
BstKTI GATC 8 cut(s) 226, 373, 415, 493, 627, 816, 822, 987
BstMBI GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
BstMCI CGRYCG 2 cut(s) 298, 514
BstMWI GCNNNNNNNGC 2 cut(s) 1170, 1274
BstNI CCWGG 3 cut(s) 693, 714, 919
BstSCI CCNGG 4 cut(s) 486, 691, 712, 917
BstSFI CTRYAG 2 cut(s) 465, 522
BstV1I GCAGC 5 cut(s) 16, 129, 700, 754, 1153
BstV2I GAAGAC 1 cut(s) 1146
BstX2I RGATCY 1 cut(s) 819
BstYI RGATCY 1 cut(s) 819
Bsu36I CCTNAGG 1 cut(s) 153
BsuI GTATCC 1 cut(s) 415
BsuRI GGCC 2 cut(s) 1095, 1268
BtrI CACGTC 1 cut(s) 315
BtsCI GGATG 3 cut(s) 762, 982, 1063
BtsIMutI CAGTG 3 cut(s) 290, 594, 816
Cac8I GCNNGC 4 cut(s) 79, 747, 901, 1129
CfoI GCGC 1 cut(s) 89
Cfr13I GGNCC 3 cut(s) 484, 1094, 1267
Csp6I GTAC 2 cut(s) 269, 462
CviAII CATG 1 cut(s) 266
CviQI GTAC 2 cut(s) 269, 462
DdeI CTNAG 3 cut(s) 153, 586, 1002
DpnI GATC 8 cut(s) 225, 372, 414, 492, 626, 815, 821, 986
DpnII GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
DriI GACNNNNNGTC 1 cut(s) 331
Eam1104I CTCTTC 4 cut(s) 67, 128, 364, 1040
Eam1105I GACNNNNNGTC 1 cut(s) 331
EarI CTCTTC 4 cut(s) 67, 128, 364, 1040
Eco130I CCWWGG 2 cut(s) 432, 1067
Eco24I GRGCYC 2 cut(s) 665, 1166
Eco47I GGWCC 1 cut(s) 484
Eco57I CTGAAG 2 cut(s) 188, 1188
Eco81I CCTNAGG 1 cut(s) 153
Eco88I CYCGRG 1 cut(s) 658
EcoO109I RGGNCCY 1 cut(s) 1267
EcoRII CCWGG 3 cut(s) 691, 712, 917
EcoT14I CCWWGG 2 cut(s) 432, 1067
EcoT22I ATGCAT 1 cut(s) 1240
EcoT38I GRGCYC 2 cut(s) 665, 1166
ErhI CCWWGG 2 cut(s) 432, 1067
FaeI CATG 1 cut(s) 269
FalI AAGNNNNNCTT 4 cut(s) 370, 402, 431, 463
FaqI GGGAC 1 cut(s) 470
FatI CATG 1 cut(s) 265
FauNDI CATATG 2 cut(s) 182, 1240
FbaI TGATCA 1 cut(s) 624
FblI GTMKAC 1 cut(s) 614
Fnu4HI GCNGC 6 cut(s) 30, 90, 143, 689, 743, 1142
FokI GGATG 3 cut(s) 749, 989, 1070
FriOI GRGCYC 2 cut(s) 665, 1166
Fsp4HI GCNGC 6 cut(s) 30, 90, 143, 689, 743, 1142
FspBI CTAG 6 cut(s) 84, 416, 555, 750, 1158, 1176
GlaI GCGC 1 cut(s) 88
GluI GCNGC 6 cut(s) 30, 90, 143, 689, 743, 1142
GsaI CCCAGC 1 cut(s) 1148
GsuI CTGGAG 1 cut(s) 229
HaeII RGCGCY 1 cut(s) 90
HaeIII GGCC 2 cut(s) 1095, 1268
HapII CCGG 5 cut(s) 66, 374, 488, 510, 1132
HhaI GCGC 1 cut(s) 89
Hin1II CATG 1 cut(s) 269
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HinfI GANTC 5 cut(s) 597, 844, 852, 1151, 1244
HpaII CCGG 5 cut(s) 66, 374, 488, 510, 1132
HphI GGTGA 3 cut(s) 448, 736, 1160
Hpy166II GTNNAC 2 cut(s) 592, 615
Hpy188I TCNGA 8 cut(s) 7, 207, 319, 337, 396, 624, 1207, 1261
Hpy188III TCNNGA 3 cut(s) 246, 500, 817
Hpy8I GTNNAC 2 cut(s) 592, 615
HpyCH4III ACNGT 2 cut(s) 466, 682
HpyCH4IV ACGT 4 cut(s) 314, 701, 859, 1114
HpyCH4V TGCA 6 cut(s) 32, 274, 676, 742, 1141, 1238
HpyF10VI GCNNNNNNNGC 2 cut(s) 1170, 1274
HpyF3I CTNAG 3 cut(s) 153, 586, 1002
HpySE526I ACGT 4 cut(s) 314, 701, 859, 1114
Hsp92II CATG 1 cut(s) 269
HspAI GCGC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 624
Kzo9I GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
LmnI GCTCC 3 cut(s) 62, 838, 1037
Lsp1109I GCAGC 5 cut(s) 16, 129, 700, 754, 1153
LweI GCATC 3 cut(s) 663, 853, 1225
MaeI CTAG 6 cut(s) 84, 416, 555, 750, 1158, 1176
MaeII ACGT 4 cut(s) 314, 701, 859, 1114
MaeIII GTNAC 3 cut(s) 497, 697, 724
MalI GATC 8 cut(s) 225, 372, 414, 492, 626, 815, 821, 986
MboI GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
MflI RGATCY 1 cut(s) 819
MhlI GDGCHC 2 cut(s) 665, 1166
MluCI AATT 5 cut(s) 605, 927, 1073, 1135, 1190
MlyI GAGTC 3 cut(s) 861, 1160, 1238
Mph1103I ATGCAT 1 cut(s) 1240
MspA1I CMGCKG 1 cut(s) 1144
MspI CCGG 5 cut(s) 66, 374, 488, 510, 1132
MspR9I CCNGG 4 cut(s) 488, 693, 714, 919
MvaI CCWGG 3 cut(s) 693, 714, 919
MwoI GCNNNNNNNGC 2 cut(s) 1170, 1274
NciI CCSGG 1 cut(s) 488
NdeI CATATG 2 cut(s) 182, 1240
NdeII GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
NlaIII CATG 1 cut(s) 269
NlaIV GGNNCC 6 cut(s) 58, 486, 840, 882, 1033, 1269
NmuCI GTSAC 3 cut(s) 497, 697, 724
NsiI ATGCAT 1 cut(s) 1240
PfeI GAWTC 2 cut(s) 597, 844
PfoI TCCNGGA 1 cut(s) 486
PkrI GCNGC 6 cut(s) 31, 91, 144, 690, 744, 1143
PleI GAGTC 3 cut(s) 860, 1159, 1238
PpsI GAGTC 3 cut(s) 860, 1159, 1238
Psp6I CCWGG 3 cut(s) 691, 712, 917
PspFI CCCAGC 1 cut(s) 1144
PspGI CCWGG 3 cut(s) 691, 712, 917
PspN4I GGNNCC 6 cut(s) 58, 486, 840, 882, 1033, 1269
PspPI GGNCC 3 cut(s) 484, 1094, 1267
PsuI RGATCY 1 cut(s) 819
PvuII CAGCTG 1 cut(s) 1144
RsaI GTAC 2 cut(s) 270, 463
RsaNI GTAC 2 cut(s) 269, 462
SatI GCNGC 6 cut(s) 30, 90, 143, 689, 743, 1142
Sau3AI GATC 8 cut(s) 223, 370, 412, 490, 624, 813, 819, 984
Sau96I GGNCC 3 cut(s) 484, 1094, 1267
SchI GAGTC 3 cut(s) 861, 1160, 1238
ScrFI CCNGG 4 cut(s) 488, 693, 714, 919
SduI GDGCHC 2 cut(s) 665, 1166
SfaNI GCATC 3 cut(s) 663, 853, 1225
SfcI CTRYAG 2 cut(s) 465, 522
SinI GGWCC 1 cut(s) 484
SmlI CTYRAG 2 cut(s) 236, 953
SmoI CTYRAG 2 cut(s) 236, 953
Sse9I AATT 5 cut(s) 605, 927, 1073, 1135, 1190
SsiI CCGC 6 cut(s) 90, 158, 177, 199, 782, 884
SspMI CTAG 6 cut(s) 84, 416, 555, 750, 1158, 1176
StyD4I CCNGG 4 cut(s) 486, 691, 712, 917
StyI CCWWGG 2 cut(s) 432, 1067
TaaI ACNGT 2 cut(s) 466, 682
TaiI ACGT 4 cut(s) 317, 704, 862, 1117
TaqI TCGA 3 cut(s) 411, 493, 671
TaqII GACCGA 1 cut(s) 284
TasI AATT 5 cut(s) 605, 927, 1073, 1135, 1190
TatI WGTACW 1 cut(s) 268
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 2 cut(s) 597, 844
TscAI CASTG 3 cut(s) 290, 594, 816
TseFI GTSAC 3 cut(s) 497, 697, 724
TseI GCWGC 5 cut(s) 29, 142, 688, 742, 1141
Tsp45I GTSAC 3 cut(s) 497, 697, 724
TspDTI ATGAA 4 cut(s) 270, 298, 927, 951
TspGWI ACGGA 3 cut(s) 342, 342, 743
TspRI CASTG 3 cut(s) 290, 594, 816
VpaK11BI GGWCC 1 cut(s) 484
XapI RAATTY 2 cut(s) 1135, 1190
XmiI GTMKAC 1 cut(s) 614
XspI CTAG 6 cut(s) 84, 416, 555, 750, 1158, 1176
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.