FvH4_5g05871

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000109
Physical Location & Seq
Reverse (-)
3464847 .. 3466187
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05871.t1

Sequence Viewer

Length: 1341 bp
ATGAAGAAGCGTCTCCCAGACCCGAAGGTGGTGATCGACACCCTGACTTCCGTCTGGGATCTCCATAACCGTCTCCAGGTACGTTCGGTGGGAGATCGATATTTGCTCAAGTTCTCTCGCCCTGAAGATCATCGCTATCCGATCCAAGGAGGTCCATGGTTCTTTGGACGATCCAACTTCATGCTTTCAGAGTGTGATGGTCTCTCTAAGGTGACCACTGTTCTGATCTCCTCTATGTCGGTGTGGGTTGAGATCCTTGGACTCCCACCACGTTTGTTCACAGAAGAGGCTGCAGGGAAGGTCGGCGATCTCTTAGGGCATGTGTTGTTTCTGGATAAGATTGGTTTGCGGTGTGGAATTCGAGCCAAGGTCCGGCTCATCCATGATATATCAGATCCGGTGAGGGAGGCATTCCCTCCGATGCTTTTTGAATTTGATTTGGGTGGTCGAAAGGCGACGGTTATGCTTTCCTTCAAGTATGAAAGGGTGGTAGGGTTTTGTCGAGTTTGTGAACTGTTGGAGCATCTTTCTCAGGGGTGCGACGGTCCACCGGATGTAACGAAGGCTCAACAGGTTAGCTTGGTGCCGGTGGCAGAGGTGGAGAGGAATATTTTAGGGTTTGGACGCTTTCGTTCACCAAAAACCCTAACCCTAGCTTTCAAGGTTCGCTCAAATCCTCTCCCTGCTCCGGTGAATCCCTTCTCAGGTGGAGTTCTCTCGGCTTCGAGTCCGAGTTCGTCGTCGTCGCAGTCAGGGAGTATATTCTCTATCCCTGGTGTTTCGGCCTCAAAGTTGGCAAGGCAACTGGCTTCTTTCAAGTCTCCTTCTCCGACCTTGCTGCCATCCTTGGGAAAGGATTCAGAGGGTCTACTGGTTATTCATATTCCGGCGGCAGTCTATAATCTGGTTATCAGAGTGAAGAGAGATGCTGACTTAACCCTCATTCCAATGGGTAAGAGAGCTCGGAGTGATGATGCTCCTATGGAGGTAATCCCCTATGAGCCTTCCTTTGTACCTGAGATGTTTTTGGCTTTTAAGGATGACAGGATCCAAATCTCGCCGGTAAAGAAGAAGAAACGTGGAAGACCTTTTGGCTCCAAGAACAAGAAGAAAATTATGGAGGTGCAACTAGGGAAGGCAAGAGCTAACTCTGGGGGCCCTAGGAAAGCTAAGAAGCGGAGTTTCGGTGCTCGTCGTGTTCTTGAGATGGGAGAGAGCTCTGGTGGCTCTACAGGGATGGCAGATCAGTCTGGGGTGGTGATAGAAGCTATAGAGGATGCTGTTGTCGCTGCCAATTCCAGTGATTCGGTGTCGGAGTCCGGGGAGATCCTTTCTGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
DDE_Tnp_1_7 DUF4283 RVT_1 RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

447

Amino Acids

48.59

Weight (kDa)

9.68

Isoelectric Point (pI)

54.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 583
AccI GTMKAC 1 cut(s) 868
AciI CCGC 3 cut(s) 349, 890, 1177
AclWI GGATC 8 cut(s) 66, 136, 165, 247, 389, 1042, 1055, 1321
AcsI RAATTY 2 cut(s) 357, 431
AcuI CTGAAG 1 cut(s) 144
AfaI GTAC 2 cut(s) 81, 1014
AfiI CCNNNNNNNGG 7 cut(s) 28, 76, 146, 372, 688, 704, 848
AgsI TTSAA 4 cut(s) 431, 475, 661, 817
AjnI CCWGG 2 cut(s) 75, 772
AluBI AGCT 7 cut(s) 579, 656, 962, 1145, 1169, 1218, 1268
AluI AGCT 7 cut(s) 579, 656, 962, 1145, 1169, 1218, 1268
Alw21I GWGCWC 3 cut(s) 964, 1192, 1220
Alw26I GTCTC 4 cut(s) 17, 77, 206, 825
AlwI GGATC 8 cut(s) 66, 136, 165, 247, 389, 1042, 1055, 1321
AoxI GGCC 2 cut(s) 783, 1156
ApaI GGGCCC 1 cut(s) 1160
ApeKI GCWGC 3 cut(s) 290, 838, 1289
ApoI RAATTY 2 cut(s) 357, 431
Asp700I GAANNNNTTC 2 cut(s) 698, 856
AspA2I CCTAGG 1 cut(s) 1160
AspS9I GGNCC 5 cut(s) 152, 370, 545, 1156, 1157
AsuC2I CCSGG 1 cut(s) 1321
AsuHPI GGTGA 6 cut(s) 43, 223, 412, 627, 703, 1270
AvaII GGWCC 3 cut(s) 152, 370, 545
AvrII CCTAGG 1 cut(s) 1160
BaeGI GKGCMC 1 cut(s) 1160
BamHI GGATCC 1 cut(s) 1047
BanI GGYRCC 1 cut(s) 583
BanII GRGCYC 3 cut(s) 964, 1160, 1220
BbsI GAAGAC 1 cut(s) 1090
Bbv12I GWGCWC 3 cut(s) 964, 1192, 1220
BbvI GCAGC 3 cut(s) 277, 825, 1276
BccI CCATC 4 cut(s) 191, 850, 1201, 1231
BcgI CGANNNNNNTGC 4 cut(s) 445, 479, 820, 854
BciT130I CCWGG 2 cut(s) 77, 774
BcnI CCSGG 1 cut(s) 1321
BcoDI GTCTC 4 cut(s) 17, 77, 206, 825
BfaI CTAG 3 cut(s) 653, 1130, 1161
BfmI CTRYAG 3 cut(s) 291, 1230, 1269
BisI GCNGC 4 cut(s) 291, 839, 891, 1290
BlnI CCTAGG 1 cut(s) 1160
BlsI GCNGC 4 cut(s) 292, 840, 892, 1291
Bme1390I CCNGG 3 cut(s) 77, 774, 1321
Bme18I GGWCC 3 cut(s) 152, 370, 545
BmgT120I GGNCC 5 cut(s) 152, 370, 545, 1156, 1157
BmiI GGNNCC 5 cut(s) 585, 1049, 1096, 1157, 1158
BmrFI CCNGG 3 cut(s) 77, 774, 1321
BmsI GCATC 5 cut(s) 411, 532, 916, 964, 1267
BoxI GACNNNNGTC 1 cut(s) 50
BpiI GAAGAC 1 cut(s) 1090
BpmI CTGGAG 1 cut(s) 59
BpuEI CTTGAG 2 cut(s) 92, 1223
BpuMI CCSGG 1 cut(s) 1321
Bsa29I ATCGAT 1 cut(s) 97
BsaBI GATNNNNATC 1 cut(s) 1052
BsaI GGTCTC 1 cut(s) 206
BsaJI CCNNGG 8 cut(s) 145, 155, 256, 366, 772, 846, 1160, 1320
BsaWI WCCGGW 3 cut(s) 397, 550, 688
BsaXI ACNNNNNCTCC 2 cut(s) 1171, 1201
Bsc4I CCNNNNNNNGG 7 cut(s) 28, 76, 146, 372, 688, 704, 848
Bse118I RCCGGY 2 cut(s) 586, 1060
Bse1I ACTGG 3 cut(s) 810, 876, 1299
Bse8I GATNNNNATC 1 cut(s) 1052
BseBI CCWGG 2 cut(s) 77, 774
BseCI ATCGAT 1 cut(s) 97
BseDI CCNNGG 8 cut(s) 145, 155, 256, 366, 772, 846, 1160, 1320
BseGI GGATG 6 cut(s) 378, 559, 842, 1045, 1242, 1282
BseJI GATNNNNATC 1 cut(s) 1052
BseLI CCNNNNNNNGG 7 cut(s) 28, 76, 146, 372, 688, 704, 848
BseMII CTCAG 3 cut(s) 545, 717, 1008
BseNI ACTGG 3 cut(s) 810, 876, 1299
BseRI GAGGAG 1 cut(s) 220
BseSI GKGCMC 1 cut(s) 1160
BseXI GCAGC 3 cut(s) 277, 825, 1276
BshFI GGCC 2 cut(s) 785, 1158
BshNI GGYRCC 1 cut(s) 583
BshVI ATCGAT 1 cut(s) 97
BsiHKAI GWGCWC 3 cut(s) 964, 1192, 1220
BsiSI CCGG 8 cut(s) 373, 398, 551, 587, 689, 887, 1061, 1320
BslI CCNNNNNNNGG 7 cut(s) 28, 76, 146, 372, 688, 704, 848
BsmAI GTCTC 4 cut(s) 17, 77, 206, 825
BsmBI CGTCTC 2 cut(s) 17, 77
BsmI GAATGC 1 cut(s) 410
BsnI GGCC 2 cut(s) 785, 1158
Bso31I GGTCTC 1 cut(s) 206
Bsp120I GGGCCC 1 cut(s) 1156
Bsp1286I GDGCHC 4 cut(s) 964, 1160, 1192, 1220
Bsp19I CCATGG 1 cut(s) 155
BspACI CCGC 3 cut(s) 349, 890, 1177
BspANI GGCC 2 cut(s) 785, 1158
BspCNI CTCAG 3 cut(s) 544, 716, 1009
BspDI ATCGAT 1 cut(s) 97
BspLI GGNNCC 5 cut(s) 585, 1049, 1096, 1157, 1158
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 8 cut(s) 66, 136, 165, 247, 389, 1042, 1055, 1321
BspT107I GGYRCC 1 cut(s) 583
BspTNI GGTCTC 1 cut(s) 206
BsrFI RCCGGY 2 cut(s) 586, 1060
BsrI ACTGG 3 cut(s) 810, 876, 1299
BssAI RCCGGY 2 cut(s) 586, 1060
BssECI CCNNGG 8 cut(s) 145, 155, 256, 366, 772, 846, 1160, 1320
BssT1I CCWWGG 6 cut(s) 145, 155, 256, 366, 846, 1160
Bst2UI CCWGG 2 cut(s) 77, 774
Bst4CI ACNGT 5 cut(s) 71, 220, 460, 516, 545
Bst6I CTCTTC 2 cut(s) 279, 914
BstDEI CTNAG 6 cut(s) 207, 313, 531, 703, 1017, 1170
BstDSI CCRYGG 1 cut(s) 155
BstEII GGTNACC 1 cut(s) 211
BstF5I GGATG 6 cut(s) 378, 559, 842, 1045, 1242, 1282
BstMAI GTCTC 4 cut(s) 17, 77, 206, 825
BstMWI GCNNNNNNNGC 2 cut(s) 1224, 1286
BstNI CCWGG 2 cut(s) 77, 774
BstNSI RCATGY 1 cut(s) 323
BstPAI GACNNNNGTC 1 cut(s) 50
BstPI GGTNACC 1 cut(s) 211
BstSCI CCNGG 3 cut(s) 75, 772, 1319
BstSFI CTRYAG 3 cut(s) 291, 1230, 1269
BstSLI GKGCMC 1 cut(s) 1160
BstV1I GCAGC 3 cut(s) 277, 825, 1276
BstV2I GAAGAC 1 cut(s) 1090
BstX2I RGATCY 5 cut(s) 58, 252, 394, 1047, 1326
BstYI RGATCY 5 cut(s) 58, 252, 394, 1047, 1326
Bsu15I ATCGAT 1 cut(s) 97
BsuRI GGCC 2 cut(s) 785, 1158
BsuTUI ATCGAT 1 cut(s) 97
BtgI CCRYGG 1 cut(s) 155
BtgZI GCGATG 1 cut(s) 116
BtsCI GGATG 6 cut(s) 378, 559, 842, 1045, 1242, 1282
BtsIMutI CAGTG 2 cut(s) 216, 1306
Cfr10I RCCGGY 2 cut(s) 586, 1060
Cfr13I GGNCC 5 cut(s) 152, 370, 545, 1156, 1157
ClaI ATCGAT 1 cut(s) 97
CseI GACGC 1 cut(s) 633
Csp6I GTAC 2 cut(s) 80, 1013
CspCI CAANNNNNGTGG 2 cut(s) 255, 290
CviAII CATG 4 cut(s) 156, 181, 320, 383
CviQI GTAC 2 cut(s) 80, 1013
DdeI CTNAG 6 cut(s) 207, 313, 531, 703, 1017, 1170
Eam1104I CTCTTC 2 cut(s) 279, 914
EarI CTCTTC 2 cut(s) 279, 914
Ecl136II GAGCTC 2 cut(s) 962, 1218
Eco130I CCWWGG 6 cut(s) 145, 155, 256, 366, 846, 1160
Eco24I GRGCYC 3 cut(s) 964, 1160, 1220
Eco31I GGTCTC 1 cut(s) 206
Eco47I GGWCC 3 cut(s) 152, 370, 545
Eco53kI GAGCTC 2 cut(s) 962, 1218
Eco57I CTGAAG 1 cut(s) 144
Eco91I GGTNACC 1 cut(s) 211
EcoICRI GAGCTC 2 cut(s) 962, 1218
EcoO109I RGGNCCY 2 cut(s) 1156, 1157
EcoO65I GGTNACC 1 cut(s) 211
EcoRI GAATTC 1 cut(s) 357
EcoRII CCWGG 2 cut(s) 75, 772
EcoT14I CCWWGG 6 cut(s) 145, 155, 256, 366, 846, 1160
EcoT38I GRGCYC 3 cut(s) 964, 1160, 1220
ErhI CCWWGG 6 cut(s) 145, 155, 256, 366, 846, 1160
Esp3I CGTCTC 2 cut(s) 17, 77
FaeI CATG 4 cut(s) 159, 184, 323, 386
FatI CATG 4 cut(s) 155, 180, 319, 382
FblI GTMKAC 1 cut(s) 868
Fnu4HI GCNGC 4 cut(s) 291, 839, 891, 1290
FokI GGATG 6 cut(s) 365, 566, 829, 1052, 1249, 1289
FriOI GRGCYC 3 cut(s) 964, 1160, 1220
Fsp4HI GCNGC 4 cut(s) 291, 839, 891, 1290
FspBI CTAG 3 cut(s) 653, 1130, 1161
GluI GCNGC 4 cut(s) 291, 839, 891, 1290
GsuI CTGGAG 1 cut(s) 59
HaeIII GGCC 2 cut(s) 785, 1158
HapII CCGG 8 cut(s) 373, 398, 551, 587, 689, 887, 1061, 1320
HgaI GACGC 1 cut(s) 633
Hin1II CATG 4 cut(s) 159, 184, 323, 386
HinfI GANTC 6 cut(s) 261, 694, 727, 857, 1304, 1316
HpaII CCGG 8 cut(s) 373, 398, 551, 587, 689, 887, 1061, 1320
HphI GGTGA 6 cut(s) 43, 223, 412, 627, 703, 1270
Hpy166II GTNNAC 5 cut(s) 279, 512, 548, 635, 869
Hpy188III TCNNGA 2 cut(s) 332, 1202
Hpy8I GTNNAC 5 cut(s) 279, 512, 548, 635, 869
Hpy99I CGWCG 6 cut(s) 460, 545, 742, 745, 748, 1197
HpyAV CCTTC 8 cut(s) 19, 292, 481, 556, 709, 834, 1014, 1129
HpyCH4III ACNGT 5 cut(s) 71, 220, 460, 516, 545
HpyCH4IV ACGT 3 cut(s) 82, 271, 1078
HpyCH4V TGCA 2 cut(s) 293, 1126
HpyF10VI GCNNNNNNNGC 2 cut(s) 1224, 1286
HpyF3I CTNAG 6 cut(s) 207, 313, 531, 703, 1017, 1170
HpySE526I ACGT 3 cut(s) 82, 271, 1078
Hsp92II CATG 4 cut(s) 159, 184, 323, 386
LmnI GCTCC 4 cut(s) 520, 691, 982, 1100
Lsp1109I GCAGC 3 cut(s) 277, 825, 1276
LweI GCATC 5 cut(s) 411, 532, 916, 964, 1267
MaeI CTAG 3 cut(s) 653, 1130, 1161
MaeII ACGT 3 cut(s) 82, 271, 1078
MaeIII GTNAC 2 cut(s) 211, 556
MboII GAAGA 8 cut(s) 16, 137, 296, 931, 1081, 1084, 1095, 1120
MflI RGATCY 5 cut(s) 58, 252, 394, 1047, 1326
MhlI GDGCHC 4 cut(s) 964, 1160, 1192, 1220
MluCI AATT 4 cut(s) 357, 431, 1113, 1294
MlyI GAGTC 3 cut(s) 255, 736, 1325
MmeI TCCRAC 4 cut(s) 198, 498, 854, 1293
MroXI GAANNNNTTC 2 cut(s) 698, 856
MseI TTAA 2 cut(s) 935, 1035
MslI CAYNNNNRTG 1 cut(s) 947
MspI CCGG 8 cut(s) 373, 398, 551, 587, 689, 887, 1061, 1320
MspR9I CCNGG 3 cut(s) 77, 774, 1321
Mva1269I GAATGC 1 cut(s) 410
MvaI CCWGG 2 cut(s) 77, 774
MwoI GCNNNNNNNGC 2 cut(s) 1224, 1286
NciI CCSGG 1 cut(s) 1321
NcoI CCATGG 1 cut(s) 155
NlaIII CATG 4 cut(s) 159, 184, 323, 386
NlaIV GGNNCC 5 cut(s) 585, 1049, 1096, 1157, 1158
NmeAIII GCCGAG 1 cut(s) 698
NmuCI GTSAC 1 cut(s) 211
NspI RCATGY 1 cut(s) 323
PctI GAATGC 1 cut(s) 410
PdmI GAANNNNTTC 2 cut(s) 698, 856
PfeI GAWTC 3 cut(s) 694, 857, 1304
PkrI GCNGC 4 cut(s) 292, 840, 892, 1291
PleI GAGTC 3 cut(s) 255, 735, 1324
PpsI GAGTC 3 cut(s) 255, 735, 1324
PshAI GACNNNNGTC 1 cut(s) 50
Psp124BI GAGCTC 2 cut(s) 964, 1220
Psp6I CCWGG 2 cut(s) 75, 772
PspEI GGTNACC 1 cut(s) 211
PspGI CCWGG 2 cut(s) 75, 772
PspN4I GGNNCC 5 cut(s) 585, 1049, 1096, 1157, 1158
PspOMI GGGCCC 1 cut(s) 1156
PspPI GGNCC 5 cut(s) 152, 370, 545, 1156, 1157
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 5 cut(s) 58, 252, 394, 1047, 1326
RsaI GTAC 2 cut(s) 81, 1014
RsaNI GTAC 2 cut(s) 80, 1013
RseI CAYNNNNRTG 1 cut(s) 947
SacI GAGCTC 2 cut(s) 964, 1220
SaqAI TTAA 2 cut(s) 935, 1035
SatI GCNGC 4 cut(s) 291, 839, 891, 1290
Sau96I GGNCC 5 cut(s) 152, 370, 545, 1156, 1157
SchI GAGTC 3 cut(s) 255, 736, 1325
ScrFI CCNGG 3 cut(s) 77, 774, 1321
SduI GDGCHC 4 cut(s) 964, 1160, 1192, 1220
SfaNI GCATC 5 cut(s) 411, 532, 916, 964, 1267
SfcI CTRYAG 3 cut(s) 291, 1230, 1269
SinI GGWCC 3 cut(s) 152, 370, 545
SmiMI CAYNNNNRTG 1 cut(s) 947
SmlI CTYRAG 2 cut(s) 107, 1202
SmoI CTYRAG 2 cut(s) 107, 1202
Sse9I AATT 4 cut(s) 357, 431, 1113, 1294
SsiI CCGC 3 cut(s) 349, 890, 1177
SspI AATATT 1 cut(s) 610
SspMI CTAG 3 cut(s) 653, 1130, 1161
SstI GAGCTC 2 cut(s) 964, 1220
StyD4I CCNGG 3 cut(s) 75, 772, 1319
StyI CCWWGG 6 cut(s) 145, 155, 256, 366, 846, 1160
TaaI ACNGT 5 cut(s) 71, 220, 460, 516, 545
TaiI ACGT 3 cut(s) 85, 274, 1081
TaqI TCGA 6 cut(s) 36, 97, 361, 448, 502, 725
TasI AATT 4 cut(s) 357, 431, 1113, 1294
TauI GCSGC 1 cut(s) 893
TfiI GAWTC 3 cut(s) 694, 857, 1304
Tru1I TTAA 2 cut(s) 935, 1035
Tru9I TTAA 2 cut(s) 935, 1035
TscAI CASTG 2 cut(s) 223, 1306
TseFI GTSAC 1 cut(s) 211
TseI GCWGC 3 cut(s) 290, 838, 1289
Tsp45I GTSAC 1 cut(s) 211
TspDTI ATGAA 4 cut(s) 17, 169, 495, 869
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 2 cut(s) 223, 1306
VpaK11BI GGWCC 3 cut(s) 152, 370, 545
XapI RAATTY 2 cut(s) 357, 431
XceI RCATGY 1 cut(s) 323
XmaJI CCTAGG 1 cut(s) 1160
XmiI GTMKAC 1 cut(s) 868
XmnI GAANNNNTTC 2 cut(s) 698, 856
XspI CTAG 3 cut(s) 653, 1130, 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.