Rmu_sc0006838.1_g000018

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006838.1
OG0000109
Physical Location & Seq
Reverse (-)
42059 .. 43414
1356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006838.1_g000018.1.cds

Sequence Viewer

Length: 1230 bp
atggttgatcatgtcaccgctcgtctcgctgcggccttggccatctcagaggacggtcggaactcctttggcccggctggcactgctgctatgtcttcccaccattttgcggtgggtaaactgctctctgttacggctaaacgccgggccaatcccaaggcttttatgggcaccatgacctctctatgggggtttggtaattgtctgtctgtctgtccgggtacatcaagacggtatgtgtttcaattctctcaattggaggaccgatcaaggattgtggatggtggtccgtggttctttggtaaatgggcgcttgctattgcggagttcgacgacctgcagaatgttgcggctgtcccgctcctctctgtgcctgtttgggttgagatcatgggcctcccttatgctcttatcactaagggagtggtggcgctcattggggctacgttaggggaggtgttacaccttgacaggctagggattcgcaaggggacggcgagggttcagatccaacatgttttgtcaaccccggtgcgtcaggttttccctccttccacttttgatttcacgtctggagcatctacaacggtgcgattcaaggtttcatcctctgatagccagcaagttccgagcgttgtggaggtgttggctcaatctccagcactgaatttgttcgctgctatgcctagatcacttcatattccgggaatttctggatcggctttcgctgcacagttggccaaatttccagctccagtaactgtgcctagcatgaagtccatgcaggttgatgttcaggccgataatccaattacaggaaagaaaagacctgcagcggtgtctttggtacaatattcaaagcgtaagagaaccagtgatgtgccccctccaactgcttcgattgtgttgggttttgagccggaactagctctgaagaataccaatggcatcattctggtgtcccctgctaagaaggcaaaggttgggcgccccccgggtcggaagaacaaccctaaacctgctagtttgcagcccaggaagctgataactagggcatccaaacctcggtggaagaggactttcaaggaaattgaactctctccttcttttggagaaggtcgaagggaagcagtccctgaagtagctccaaaacgaaatgtggaggtgataccgtcctccagcaatgctcctgagccgaaggaaagcactcttaagagtgccctagagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

409

Amino Acids

43.95

Weight (kDa)

10.32

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000109)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g11460 FvH4_1g20081 FvH4_1g21331 FvH4_1g22022 FvH4_1g27932 FvH4_2g04010 FvH4_2g07601 FvH4_2g09181 FvH4_2g18601 FvH4_2g24951 FvH4_2g27371 FvH4_3g15420 FvH4_3g26790 FvH4_3g26791 FvH4_3g34441 FvH4_3g34930 FvH4_3g45133 FvH4_4g02561 FvH4_4g05731 FvH4_4g05732 FvH4_4g06570 FvH4_4g09962 FvH4_4g13551 FvH4_4g13621 FvH4_4g14830 FvH4_4g15081 FvH4_4g26661 FvH4_5g05871 FvH4_5g08822 FvH4_5g12461 FvH4_5g24922 FvH4_5g30051 FvH4_5g30200 FvH4_5g30551 FvH4_5g32991 FvH4_5g36132 FvH4_5g37291 FvH4_6g07931 FvH4_6g08641 FvH4_6g12800 FvH4_6g13840 FvH4_6g13900 FvH4_6g16432 FvH4_6g16701 FvH4_6g28831 FvH4_6g31171 FvH4_6g41261 FvH4_7g00030 FvH4_7g01201 FvH4_7g08120 FvH4_7g10071 FvH4_7g18780
rosa_chinensis RchiOBHm_Chr2g0119561 RchiOBHm_Chr3g0458511 RchiOBHm_Chr3g0477731 RchiOBHm_Chr3g0479111 RchiOBHm_Chr3g0497091 RchiOBHm_Chr5g0072451 RchiOBHm_Chr6g0284681 RchiOBHm_Chr6g0311691 RchiOBHm_Chr7g0182191
rosa_laevigata RLG00000000983 RLG00000001598 RLG00000004616 RLG00000004931 RLG00000006806 RLG00000008371 RLG00000009544 RLG00000009718 RLG00000013465 RLG00000013533 RLG00000014631 RLG00000014987 RLG00000015588 RLG00000016226 RLG00000018171 RLG00000018433 RLG00000018649 RLG00000018710 RLG00000018870 RLG00000019205 RLG00000020638 RLG00000023424 RLG00000024707 RLG00000025967 RLG00000030020 RLG00000030596 RLG00000030996 RLG00000033451 RLG00000033757 RLG00000033758 RLG00000033808 RLG00000033812 RLG00000034857 RLG00000035240 RLG00000035691 RLG00000036232 RLG00000036301 RLG00000036412
rosa_multiflora Rmu_co8113544.1_g000001 Rmu_co8372331.1_g000001 Rmu_sc0000298.1_g000003 Rmu_sc0000552.1_g000026 Rmu_sc0000814.1_g000037 Rmu_sc0001211.1_g000126 Rmu_sc0001311.1_g000026 Rmu_sc0001354.1_g000009 Rmu_sc0002119.1_g000029 Rmu_sc0002357.1_g000020 Rmu_sc0002573.1_g000014 Rmu_sc0002586.1_g000022 Rmu_sc0003517.1_g000004 Rmu_sc0003558.1_g000001 Rmu_sc0004084.1_g000044 Rmu_sc0004143.1_g000011 Rmu_sc0004514.1_g000002 Rmu_sc0005370.1_g000004 Rmu_sc0005392.1_g000015 Rmu_sc0005664.1_g000009 Rmu_sc0006235.1_g000009 Rmu_sc0006423.1_g000001 Rmu_sc0006838.1_g000018 Rmu_sc0006847.1_g000005 Rmu_sc0006959.1_g000019 Rmu_sc0007111.1_g000002 Rmu_sc0009125.1_g000001 Rmu_sc0009546.1_g000015 Rmu_sc0009670.1_g000006 Rmu_sc0011618.1_g000004 Rmu_sc0012306.1_g000002 Rmu_sc0012306.1_g000003 Rmu_sc0012355.1_g000001 Rmu_sc0012355.1_g000002 Rmu_sc0013116.1_g000002 Rmu_sc0016872.1_g000001 Rmu_sc0017043.1_g000005 Rmu_sc0017081.1_g000003 Rmu_sc0018075.1_g000002 Rmu_sc0020578.1_g000002 Rmu_sc0034515.1_g000001 Rmu_sc0040072.1_g000003 Rmu_ssc0000309.1_g000056 Rmu_ssc0000330.1_g000048
rosa_roxburghii Rroxscaffold_1G00007410 Rroxscaffold_1G00027350 Rroxscaffold_1G00043810 Rroxscaffold_2G00099880 Rroxscaffold_2G00112650 Rroxscaffold_2G00122020 Rroxscaffold_3G00223350 Rroxscaffold_3G00239670 Rroxscaffold_5G00333740 Rroxscaffold_5G00335340 Rroxscaffold_5G00341030 Rroxscaffold_5G00342730 Rroxscaffold_6G00426030 Rroxscaffold_7G00162470 Rroxscaffold_7G00196110 Rroxscaffold_7G00202440 Rroxscaffold_7G00202450 Rroxscaffold_7G00215740
rosa_rugosa Rorug01G0176600 Rorug01G0276600 Rorug02G0236500 Rorug02G0277000 Rorug02G0363300 Rorug02G0375900 Rorug02G0473700 Rorug02G0546200 Rorug02G0601000 Rorug03G0158400 Rorug03G0289500 Rorug04G0026600 Rorug04G0090000 Rorug04G0105500 Rorug04G0263100 Rorug04G0394500 Rorug05G0122200 Rorug05G0152200 Rorug05G0541800 Rorug05G0551100 Rorug05G0554400 Rorug06G0244900 Rorug06G0401400
rosa_samantha Rh1CG158000 Rh1CG280800 Rh1CG326900 Rh2BG051500 Rh2BG101500 Rh2BG438200 Rh2BG509100 Rh2BG531600 Rh2BG531800 Rh2BG629800 Rh2BG629900 Rh2CG565300 Rh2DG448000 Rh2DG540600 Rh2DG540700 Rh2DG641700 Rh2DG641800 Rh3AG222200 Rh3BG034200 Rh3BG254700 Rh3DG286800 Rh3DG322600 Rh4AG009200 Rh4AG050400 Rh4AG223100 Rh4BG072500 Rh4BG106000 Rh4CG010200 Rh4CG053700 Rh4CG236100 Rh4CG236200 Rh4CG236300 Rh4DG104800 Rh5AG474800 Rh5BG214500 Rh5BG360000 Rh5BG403700 Rh5BG494900 Rh5DG255300 Rh6AG205400 Rh6BG227300 Rh6CG280700 Rh6DG273400 Rh7AG187300 Rh7AG220800 Rh7AG355700 Rh7AG462000 Rh7AG462200 Rh7AG465900 Rh7CG198300 Rh7CG222100 Rh7CG373000 Rh7CG479300 Rh7DG233800
rosa_wichuraiana Rw0G018350 Rw1G026500 Rw2G024750 Rw2G051200 Rw5G001570 Rw5G036850 Rw6G016070 Rw6G042710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 345, 775, 838, 1027
AccB1I GGYRCC 2 cut(s) 170, 987
AccBSI CCGCTC 2 cut(s) 20, 361
AciI CCGC 7 cut(s) 18, 32, 110, 323, 350, 359, 836
AclWI GGATC 2 cut(s) 502, 724
AcoI YGGCCR 2 cut(s) 39, 738
AcsI RAATTY 3 cut(s) 667, 708, 743
AcuI CTGAAG 2 cut(s) 953, 1158
AcyI GRCGYC 1 cut(s) 988
AfaI GTAC 2 cut(s) 223, 849
AfiI CCNNNNNNNGG 6 cut(s) 109, 186, 815, 999, 1065, 1109
AflII CTTAAG 1 cut(s) 1211
AflIII ACRYGT 1 cut(s) 514
AgsI TTSAA 5 cut(s) 245, 598, 858, 1084, 1094
AjiI CACGTC 1 cut(s) 570
AjnI CCWGG 1 cut(s) 1034
AluBI AGCT 4 cut(s) 752, 929, 1042, 1145
AluI AGCT 4 cut(s) 752, 929, 1042, 1145
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 2 cut(s) 502, 724
AlwNI CAGNNNCTG 2 cut(s) 761, 1136
Ama87I CYCGRG 1 cut(s) 994
AoxI GGCC 7 cut(s) 33, 39, 70, 147, 394, 738, 798
ApeKI GCWGC 6 cut(s) 29, 86, 677, 728, 833, 1030
ApoI RAATTY 3 cut(s) 667, 708, 743
Asp700I GAANNNNTTC 1 cut(s) 671
AspLEI GCGC 3 cut(s) 313, 433, 990
AspS9I GGNCC 5 cut(s) 71, 147, 262, 287, 394
AsuC2I CCSGG 7 cut(s) 74, 146, 219, 530, 705, 995, 996
AsuHPI GGTGA 2 cut(s) 7, 1177
AvaI CYCGRG 1 cut(s) 994
AvaII GGWCC 2 cut(s) 262, 287
BaeGI GKGCMC 3 cut(s) 173, 885, 1222
BalI TGGCCA 2 cut(s) 41, 740
BanI GGYRCC 2 cut(s) 170, 987
BbsI GAAGAC 1 cut(s) 87
BbvI GCAGC 6 cut(s) 16, 73, 664, 715, 845, 1042
BccI CCATC 2 cut(s) 50, 275
BceAI ACGGC 2 cut(s) 150, 510
BciT130I CCWGG 1 cut(s) 1036
BclI TGATCA 1 cut(s) 7
BcnI CCSGG 7 cut(s) 74, 146, 219, 530, 705, 995, 996
BcoDI GTCTC 1 cut(s) 29
BfaI CTAG 7 cut(s) 476, 687, 768, 926, 1023, 1050, 1223
BfmI CTRYAG 2 cut(s) 338, 831
BfoI RGCGCY 3 cut(s) 314, 434, 991
BfrI CTTAAG 1 cut(s) 1211
BfuAI ACCTGC 4 cut(s) 345, 775, 838, 1027
BglI GCCNNNNNGGC 1 cut(s) 78
BisI GCNGC 8 cut(s) 30, 33, 87, 351, 678, 729, 834, 1031
BlsI GCNGC 8 cut(s) 31, 34, 88, 352, 679, 730, 835, 1032
Bme1390I CCNGG 8 cut(s) 74, 146, 219, 530, 705, 995, 996, 1036
Bme18I GGWCC 2 cut(s) 262, 287
BmeT110I CYCGRG 1 cut(s) 994
BmgBI CACGTC 1 cut(s) 570
BmgT120I GGNCC 5 cut(s) 71, 147, 262, 287, 394
BmiI GGNNCC 2 cut(s) 172, 989
BmrFI CCNGG 8 cut(s) 74, 146, 219, 530, 705, 995, 996, 1036
BmsI GCATC 3 cut(s) 587, 957, 1064
BpiI GAAGAC 1 cut(s) 87
BpmI CTGGAG 4 cut(s) 594, 642, 738, 1162
Bpu10I CCTNAGC 1 cut(s) 1191
BpuMI CCSGG 7 cut(s) 74, 146, 219, 530, 705, 995, 996
BsaHI GRCGYC 1 cut(s) 988
BsaJI CCNNGG 8 cut(s) 36, 156, 290, 528, 993, 994, 1034, 1064
Bsc4I CCNNNNNNNGG 6 cut(s) 109, 186, 815, 999, 1065, 1109
Bse1I ACTGG 2 cut(s) 755, 873
Bse3DI GCAATG 1 cut(s) 1189
BseBI CCWGG 1 cut(s) 1036
BseDI CCNNGG 8 cut(s) 36, 156, 290, 528, 993, 994, 1034, 1064
BseGI GGATG 3 cut(s) 286, 605, 1055
BseLI CCNNNNNNNGG 6 cut(s) 109, 186, 815, 999, 1065, 1109
BseMI GCAATG 1 cut(s) 1189
BseMII CTCAG 2 cut(s) 60, 1182
BseNI ACTGG 2 cut(s) 755, 873
BseRI GAGGAG 1 cut(s) 353
BseSI GKGCMC 3 cut(s) 173, 885, 1222
BseXI GCAGC 6 cut(s) 16, 73, 664, 715, 845, 1042
BsgI GTGCAG 1 cut(s) 714
Bsh1285I CGRYCG 1 cut(s) 58
BshFI GGCC 7 cut(s) 35, 41, 72, 149, 396, 740, 800
BshNI GGYRCC 2 cut(s) 170, 987
BsiEI CGRYCG 1 cut(s) 58
BsiHKCI CYCGRG 1 cut(s) 994
BsiSI CCGG 7 cut(s) 74, 145, 218, 530, 704, 920, 995
BslFI GGGAC 4 cut(s) 341, 505, 946, 1118
BslI CCNNNNNNNGG 6 cut(s) 109, 186, 815, 999, 1065, 1109
BsmAI GTCTC 1 cut(s) 29
BsmBI CGTCTC 1 cut(s) 29
BsmFI GGGAC 4 cut(s) 341, 505, 946, 1118
BsnI GGCC 7 cut(s) 35, 41, 72, 149, 396, 740, 800
BsoBI CYCGRG 1 cut(s) 994
Bsp1286I GDGCHC 3 cut(s) 173, 885, 1222
Bsp143I GATC 6 cut(s) 7, 266, 387, 507, 689, 716
BspACI CCGC 7 cut(s) 18, 32, 110, 323, 350, 359, 836
BspANI GGCC 7 cut(s) 35, 41, 72, 149, 396, 740, 800
BspCNI CTCAG 2 cut(s) 59, 1183
BspLI GGNNCC 2 cut(s) 172, 989
BspMAI CTGCAG 2 cut(s) 342, 835
BspMI ACCTGC 4 cut(s) 345, 775, 838, 1027
BspPI GGATC 2 cut(s) 502, 724
BspT107I GGYRCC 2 cut(s) 170, 987
BspTI CTTAAG 1 cut(s) 1211
BsrBI CCGCTC 2 cut(s) 20, 361
BsrDI GCAATG 1 cut(s) 1189
BsrI ACTGG 2 cut(s) 755, 873
BssECI CCNNGG 8 cut(s) 36, 156, 290, 528, 993, 994, 1034, 1064
BssMI GATC 6 cut(s) 7, 266, 387, 507, 689, 716
BssNI GRCGYC 1 cut(s) 988
BssT1I CCWWGG 2 cut(s) 36, 156
Bst2UI CCWGG 1 cut(s) 1036
Bst4CI ACNGT 6 cut(s) 56, 234, 589, 735, 763, 1173
Bst6I CTCTTC 1 cut(s) 1067
BstACI GRCGYC 1 cut(s) 988
BstAFI CTTAAG 1 cut(s) 1211
BstC8I GCNNGC 3 cut(s) 79, 315, 620
BstDEI CTNAG 4 cut(s) 46, 417, 969, 1191
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 3 cut(s) 286, 605, 1055
BstH2I RGCGCY 3 cut(s) 314, 434, 991
BstHHI GCGC 3 cut(s) 313, 433, 990
BstKTI GATC 6 cut(s) 10, 269, 390, 510, 692, 719
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 6 cut(s) 7, 266, 387, 507, 689, 716
BstMCI CGRYCG 1 cut(s) 58
BstMWI GCNNNNNNNGC 8 cut(s) 26, 38, 78, 83, 728, 737, 974, 1039
BstNI CCWGG 1 cut(s) 1036
BstNSI RCATGY 1 cut(s) 518
BstSCI CCNGG 8 cut(s) 72, 144, 217, 528, 703, 993, 994, 1034
BstSFI CTRYAG 2 cut(s) 338, 831
BstSLI GKGCMC 3 cut(s) 173, 885, 1222
BstV1I GCAGC 6 cut(s) 16, 73, 664, 715, 845, 1042
BstV2I GAAGAC 1 cut(s) 87
BstX2I RGATCY 1 cut(s) 507
BstYI RGATCY 1 cut(s) 507
BsuRI GGCC 7 cut(s) 35, 41, 72, 149, 396, 740, 800
BtgI CCRYGG 1 cut(s) 290
BtrI CACGTC 1 cut(s) 570
BtsCI GGATG 3 cut(s) 286, 605, 1055
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 3 cut(s) 81, 662, 880
BveI ACCTGC 4 cut(s) 345, 775, 838, 1027
Cac8I GCNNGC 3 cut(s) 79, 315, 620
CaiI CAGNNNCTG 2 cut(s) 761, 1136
CfoI GCGC 3 cut(s) 313, 433, 990
Cfr13I GGNCC 5 cut(s) 71, 147, 262, 287, 394
Cfr9I CCCGGG 1 cut(s) 994
CseI GACGC 1 cut(s) 524
Csp6I GTAC 2 cut(s) 222, 848
CspCI CAANNNNNGTGG 2 cut(s) 258, 293
CviAII CATG 6 cut(s) 11, 175, 391, 515, 772, 781
CviQI GTAC 2 cut(s) 222, 848
DdeI CTNAG 4 cut(s) 46, 417, 969, 1191
DinI GGCGCC 1 cut(s) 989
DpnI GATC 6 cut(s) 9, 268, 389, 509, 691, 718
DpnII GATC 6 cut(s) 7, 266, 387, 507, 689, 716
EaeI YGGCCR 2 cut(s) 39, 738
Eam1104I CTCTTC 1 cut(s) 1067
EarI CTCTTC 1 cut(s) 1067
Eco130I CCWWGG 2 cut(s) 36, 156
Eco47I GGWCC 2 cut(s) 262, 287
Eco57I CTGAAG 2 cut(s) 953, 1158
Eco88I CYCGRG 1 cut(s) 994
EcoRII CCWGG 1 cut(s) 1034
EcoT14I CCWWGG 2 cut(s) 36, 156
EgeI GGCGCC 1 cut(s) 989
EheI GGCGCC 1 cut(s) 989
ErhI CCWWGG 2 cut(s) 36, 156
Esp3I CGTCTC 1 cut(s) 29
FaeI CATG 6 cut(s) 14, 178, 394, 518, 775, 784
FaqI GGGAC 4 cut(s) 341, 505, 946, 1118
FatI CATG 6 cut(s) 10, 174, 390, 514, 771, 780
FauI CCCGC 1 cut(s) 366
FbaI TGATCA 1 cut(s) 7
Fnu4HI GCNGC 8 cut(s) 30, 33, 87, 351, 678, 729, 834, 1031
FokI GGATG 3 cut(s) 293, 592, 1042
Fsp4HI GCNGC 8 cut(s) 30, 33, 87, 351, 678, 729, 834, 1031
FspBI CTAG 7 cut(s) 476, 687, 768, 926, 1023, 1050, 1223
GlaI GCGC 3 cut(s) 312, 432, 989
GluI GCNGC 8 cut(s) 30, 33, 87, 351, 678, 729, 834, 1031
GsuI CTGGAG 4 cut(s) 594, 642, 738, 1162
HaeII RGCGCY 3 cut(s) 314, 434, 991
HaeIII GGCC 7 cut(s) 35, 41, 72, 149, 396, 740, 800
HapII CCGG 7 cut(s) 74, 145, 218, 530, 704, 920, 995
HgaI GACGC 1 cut(s) 524
HhaI GCGC 3 cut(s) 313, 433, 990
Hin1I GRCGYC 1 cut(s) 988
Hin1II CATG 6 cut(s) 14, 178, 394, 518, 775, 784
Hin6I GCGC 3 cut(s) 311, 431, 988
HinP1I GCGC 3 cut(s) 311, 431, 988
HincII GTYRAC 1 cut(s) 525
HindII GTYRAC 1 cut(s) 525
HinfI GANTC 2 cut(s) 481, 594
HpaII CCGG 7 cut(s) 74, 145, 218, 530, 704, 920, 995
HphI GGTGA 2 cut(s) 7, 1177
Hpy166II GTNNAC 2 cut(s) 119, 525
Hpy188I TCNGA 7 cut(s) 49, 60, 507, 613, 630, 933, 1002
Hpy188III TCNNGA 4 cut(s) 228, 573, 714, 1190
Hpy8I GTNNAC 2 cut(s) 119, 525
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 6 cut(s) 561, 967, 1109, 1113, 1116, 1192
HpyCH4III ACNGT 6 cut(s) 56, 234, 589, 735, 763, 1173
HpyCH4IV ACGT 2 cut(s) 446, 569
HpyCH4V TGCA 5 cut(s) 340, 731, 784, 833, 1030
HpyF10VI GCNNNNNNNGC 8 cut(s) 26, 38, 78, 83, 728, 737, 974, 1039
HpyF3I CTNAG 4 cut(s) 46, 417, 969, 1191
HpySE526I ACGT 2 cut(s) 446, 569
Hsp92I GRCGYC 1 cut(s) 988
Hsp92II CATG 6 cut(s) 14, 178, 394, 518, 775, 784
HspAI GCGC 3 cut(s) 311, 431, 988
KasI GGCGCC 1 cut(s) 987
Ksp22I TGATCA 1 cut(s) 7
Kzo9I GATC 6 cut(s) 7, 266, 387, 507, 689, 716
LmnI GCTCC 5 cut(s) 366, 575, 757, 1150, 1192
Lsp1109I GCAGC 6 cut(s) 16, 73, 664, 715, 845, 1042
LweI GCATC 3 cut(s) 587, 957, 1064
MaeI CTAG 7 cut(s) 476, 687, 768, 926, 1023, 1050, 1223
MaeII ACGT 2 cut(s) 446, 569
MaeIII GTNAC 4 cut(s) 13, 130, 459, 757
MalI GATC 6 cut(s) 9, 268, 389, 509, 691, 718
MbiI CCGCTC 2 cut(s) 20, 361
MboI GATC 6 cut(s) 7, 266, 387, 507, 689, 716
MboII GAAGA 4 cut(s) 87, 946, 1015, 1084
MfeI CAATTG 1 cut(s) 254
MflI RGATCY 1 cut(s) 507
MhlI GDGCHC 3 cut(s) 173, 885, 1222
MlsI TGGCCA 2 cut(s) 41, 740
MluCI AATT 8 cut(s) 199, 245, 254, 667, 708, 743, 810, 1089
MluNI TGGCCA 2 cut(s) 41, 740
Mly113I GGCGCC 1 cut(s) 988
MmeI TCCRAC 4 cut(s) 38, 535, 914, 980
Mox20I TGGCCA 2 cut(s) 41, 740
MroXI GAANNNNTTC 1 cut(s) 671
MscI TGGCCA 2 cut(s) 41, 740
MseI TTAA 1 cut(s) 1212
MslI CAYNNNNRTG 1 cut(s) 956
Msp20I TGGCCA 2 cut(s) 41, 740
MspA1I CMGCKG 1 cut(s) 836
MspCI CTTAAG 1 cut(s) 1211
MspI CCGG 7 cut(s) 74, 145, 218, 530, 704, 920, 995
MspR9I CCNGG 8 cut(s) 74, 146, 219, 530, 705, 995, 996, 1036
MunI CAATTG 1 cut(s) 254
MvaI CCWGG 1 cut(s) 1036
MwoI GCNNNNNNNGC 8 cut(s) 26, 38, 78, 83, 728, 737, 974, 1039
NarI GGCGCC 1 cut(s) 988
NciI CCSGG 7 cut(s) 74, 146, 219, 530, 705, 995, 996
NdeII GATC 6 cut(s) 7, 266, 387, 507, 689, 716
NlaIII CATG 6 cut(s) 14, 178, 394, 518, 775, 784
NlaIV GGNNCC 2 cut(s) 172, 989
NmuCI GTSAC 1 cut(s) 13
NspI RCATGY 1 cut(s) 518
PciI ACATGT 1 cut(s) 514
PdmI GAANNNNTTC 1 cut(s) 671
PfeI GAWTC 2 cut(s) 481, 594
PfoI TCCNGGA 1 cut(s) 703
PkrI GCNGC 8 cut(s) 31, 34, 88, 352, 679, 730, 835, 1032
PluTI GGCGCC 1 cut(s) 991
PscI ACATGT 1 cut(s) 514
Psp6I CCWGG 1 cut(s) 1034
PspGI CCWGG 1 cut(s) 1034
PspN4I GGNNCC 2 cut(s) 172, 989
PspPI GGNCC 5 cut(s) 71, 147, 262, 287, 394
PstI CTGCAG 2 cut(s) 342, 835
PstNI CAGNNNCTG 2 cut(s) 761, 1136
PsuI RGATCY 1 cut(s) 507
RsaI GTAC 2 cut(s) 223, 849
RsaNI GTAC 2 cut(s) 222, 848
RseI CAYNNNNRTG 1 cut(s) 956
SaqAI TTAA 1 cut(s) 1212
SatI GCNGC 8 cut(s) 30, 33, 87, 351, 678, 729, 834, 1031
Sau3AI GATC 6 cut(s) 7, 266, 387, 507, 689, 716
Sau96I GGNCC 5 cut(s) 71, 147, 262, 287, 394
ScrFI CCNGG 8 cut(s) 74, 146, 219, 530, 705, 995, 996, 1036
SduI GDGCHC 3 cut(s) 173, 885, 1222
SfaNI GCATC 3 cut(s) 587, 957, 1064
SfcI CTRYAG 2 cut(s) 338, 831
SfoI GGCGCC 1 cut(s) 989
SinI GGWCC 2 cut(s) 262, 287
SmaI CCCGGG 1 cut(s) 996
SmiMI CAYNNNNRTG 1 cut(s) 956
SmlI CTYRAG 1 cut(s) 1211
SmoI CTYRAG 1 cut(s) 1211
Sse9I AATT 8 cut(s) 199, 245, 254, 667, 708, 743, 810, 1089
SsiI CCGC 7 cut(s) 18, 32, 110, 323, 350, 359, 836
SspDI GGCGCC 1 cut(s) 987
SspI AATATT 1 cut(s) 854
SspMI CTAG 7 cut(s) 476, 687, 768, 926, 1023, 1050, 1223
StyD4I CCNGG 8 cut(s) 72, 144, 217, 528, 703, 993, 994, 1034
StyI CCWWGG 2 cut(s) 36, 156
TaaI ACNGT 6 cut(s) 56, 234, 589, 735, 763, 1173
TaiI ACGT 2 cut(s) 449, 572
TaqI TCGA 3 cut(s) 330, 899, 1120
TaqII GACCGA 1 cut(s) 279
TasI AATT 8 cut(s) 199, 245, 254, 667, 708, 743, 810, 1089
TauI GCSGC 2 cut(s) 35, 353
TfiI GAWTC 2 cut(s) 481, 594
Tru1I TTAA 1 cut(s) 1212
Tru9I TTAA 1 cut(s) 1212
TscAI CASTG 3 cut(s) 88, 669, 880
TseFI GTSAC 1 cut(s) 13
TseI GCWGC 6 cut(s) 29, 86, 677, 728, 833, 1030
Tsp45I GTSAC 1 cut(s) 13
TspDTI ATGAA 3 cut(s) 594, 686, 788
TspGWI ACGGA 1 cut(s) 279
TspMI CCCGGG 1 cut(s) 994
TspRI CASTG 3 cut(s) 88, 669, 880
Vha464I CTTAAG 1 cut(s) 1211
VpaK11BI GGWCC 2 cut(s) 262, 287
XapI RAATTY 3 cut(s) 667, 708, 743
XceI RCATGY 1 cut(s) 518
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XmaI CCCGGG 1 cut(s) 994
XmnI GAANNNNTTC 1 cut(s) 671
XspI CTAG 7 cut(s) 476, 687, 768, 926, 1023, 1050, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.