FvH4_1g25481

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000030
Physical Location & Seq
Forward (+)
17231949 .. 17235215
3267 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25481.t1

Sequence Viewer

Length: 1929 bp
ATGGACGATAAGGATGCCGAGAGGAGGAAACGTGAGCCTGAGTATGCAAGGAATTCTGAATCAACGAAGAGAGCCTGTCATGAAGTAGTTTTCCATCTGGAGGAGACGCATATTGAAAAGAGGAAGAATGATGTGGACAGAGGCTGTGGAATTTCAACAGGATGTGACCCGAAAGCGTTTAAAGCTGTAGCGTCCCGAATATCGAATGAGAAGGTATTCCTGATTCAAGAATTGGGATTTGGGCCGGTGCGGCAGTTCCGGTGTAGTGAGTTAAATCTGTCGCTATGCAAAATGTTGTTGGACAATTTTAATGTTGAAAAATGTACGATCAAGATACACGGGCGAAACCTGACAGTTATGGAGAAGGACTTTGACCGGCTAATGGGATTGAGGTGTCGCGGCACAGAAGTATCCCTACCAAAGAGGGTCATCCATGATCCAGAAGTAGCGGATTTACAAGGTATAATTTGGGGGGTTGATAAAGAGATGAGTATTGACATATTGAGGAGGAATGTAGTGTTTTCAGACGATCCAGACAACTTGTTTATGGTTAGTTTTGTATTGTTTGCGCTGGCTATCATGTATTGCCCCACCAGAGCAGGTTATGTAGATCCAAGGCTGTTATTATTGGTGAAGGACAGGAAGCGTATGAGGAGTTATAACTGGGGTCGTTTAGCGTTTAGAAAATTGTTGGAGGAAGTTAAGCTGTATCAGAACAACAAACCCGGCCATGTTGGGGGCTGCCTTGTCTTCCTACAACTGTTCTATTTGAGTGTTATAGGGGAAAAAATGTTCATAATTCCAAAGAGTGTCCCTTCGGTAATGACATGGGGGAGGAAAGAGTCGAACATGATATATGAAAGGGTTGAAGAGAAAGGAGGTTTTTACAAGACTGATGGTATATGGGTAACGAAGAGATACTCAAGTGTTAGATCGACCGAGTTCTCGGGTTCCCGGGATTACAGCACGGGACTGAAAACAAATCTGGTGGACGACATGTCTGCAATGAGGTCTCACATTTCCACTGCAGAAGAGAAAGTTGGAGTTCTAGCGAATACCATGTACCGTATTGGTCCAGATATATCCAACCTGCGAGAGGCAATGACATTGTTACATGATTCAATGGTGAAGTTGAAGTCAGGAGATGTGACCGGCTTAGTGGATGAGGTGTTCAGAGCAGTCCGTTCAATTGAAGGTGGCAATGTTCATCCAGGGGAGGAGGAGGATGTGAACGCCCATATCTCGAAACCAGTCGGCCCTAACAGTGATGGTAAAGGGTCTCAGCCCTTTAATGGCAGTGGGGAGGCGAAGAAACAGAGGCGGCGTAAGTTTGGCACTGTGGCAAAACTATCCCCTTCAGACATGGATATGCTGAAGTATTTATCTAGCAAGAAGGGTCGTGCCGAGGACAGCCTAGGAAGGAGCGTGCAAAGGACTACTATGATTCTTATGCGGGAGTGCAGTCGTACGTATCAGCAACCATTAGCATGTGTAGGCTACGCAAATACTGCGGTCGTCTTAAAGCATATGAGTCTGCTGGGAGAAGTTTTTTCTTCTGAACTTGAAGTATCGGATCTAGCTCCATCAGCATTGTCCTCGTACAGTTTCACGTATCCTGAGAGCTCCCGAACTGTTCCTAACAAGTACGACTCTGGTATATTCACTATCAGACATGTCCAGTACTACCGAGAGCGGTGGTTCTCTGTGTTCAACTCTGCTGATGAGAGGATTAGGATCGCACTTGAGATTGTGAACAACCCCATGAACGAGTGCTATAAGAGTGTTTGGGATTCTGTGTGCCGCGAAGAGAATGAGATGAGTGAATGCAAGGAACTACCTGCAACAAGTGGGGACGTAGTTGGTGATCACGCAGACCCAGTTATGACAACATCAGGTATGAAGTTGAAGCCTCGTGTTCCACGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

643

Amino Acids

72.83

Weight (kDa)

8.79

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 660
Acc36I ACCTGC 3 cut(s) 590, 1098, 1846
AccBSI CCGCTC 1 cut(s) 1693
AccII CGCG 2 cut(s) 399, 1803
AciI CCGC 8 cut(s) 250, 399, 449, 1321, 1453, 1511, 1693, 1801
AclWI GGATC 5 cut(s) 431, 524, 605, 1581, 1742
AcoI YGGCCR 1 cut(s) 727
AcsI RAATTY 2 cut(s) 52, 150
AcuI CTGAAG 2 cut(s) 1341, 1394
AfaI GTAC 6 cut(s) 325, 1064, 1468, 1601, 1646, 1682
AfiI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1292
AflIII ACRYGT 2 cut(s) 996, 1672
AhdI GACNNNNNGTC 1 cut(s) 997
AjnI CCWGG 1 cut(s) 1210
AjuI GAANNNNNNNTTGG 4 cut(s) 222, 254, 1023, 1055
AloI GAACNNNNNNTCC 4 cut(s) 776, 808, 1154, 1186
AluBI AGCT 4 cut(s) 185, 706, 1580, 1623
AluI AGCT 4 cut(s) 185, 706, 1580, 1623
Alw21I GWGCWC 1 cut(s) 1625
Alw26I GTCTC 3 cut(s) 98, 1017, 1284
AlwI GGATC 5 cut(s) 431, 524, 605, 1581, 1742
AlwNI CAGNNNCTG 1 cut(s) 144
Ama87I CYCGRG 2 cut(s) 946, 954
AoxI GGCC 3 cut(s) 242, 727, 1255
ApeKI GCWGC 1 cut(s) 741
ApoI RAATTY 2 cut(s) 52, 150
Asp700I GAANNNNTTC 1 cut(s) 215
AspA2I CCTAGG 1 cut(s) 1414
AspLEI GCGC 1 cut(s) 571
AspS9I GGNCC 3 cut(s) 242, 1073, 1256
AsuC2I CCSGG 3 cut(s) 726, 955, 956
AsuHPI GGTGA 3 cut(s) 643, 1138, 1874
AvaI CYCGRG 2 cut(s) 946, 954
AvaII GGWCC 1 cut(s) 1073
AvrII CCTAGG 1 cut(s) 1414
BaeI ACNNNNGTAYC 4 cut(s) 393, 426, 910, 943
BanII GRGCYC 1 cut(s) 1625
BarI GAAGNNNNNNTAC 2 cut(s) 399, 431
BauI CACGAG 1 cut(s) 1911
BbsI GAAGAC 1 cut(s) 742
Bbv12I GWGCWC 1 cut(s) 1625
BbvI GCAGC 1 cut(s) 728
BccI CCATC 4 cut(s) 102, 890, 1262, 1591
BceAI ACGGC 1 cut(s) 1908
BcgI CGANNNNNNTGC 5 cut(s) 30, 983, 1017, 1578, 1612
BciT130I CCWGG 1 cut(s) 1212
BciVI GTATCC 2 cut(s) 421, 1623
BclI TGATCA 1 cut(s) 1864
BcnI CCSGG 3 cut(s) 726, 955, 956
BcoDI GTCTC 3 cut(s) 98, 1017, 1284
BfaI CTAG 4 cut(s) 1049, 1386, 1415, 1577
BfmI CTRYAG 2 cut(s) 186, 1026
BfuAI ACCTGC 3 cut(s) 590, 1098, 1846
BfuI GTATCC 2 cut(s) 421, 1623
BglI GCCNNNNNGGC 1 cut(s) 250
BisI GCNGC 5 cut(s) 251, 400, 742, 1322, 1801
BlnI CCTAGG 1 cut(s) 1414
BlsI GCNGC 5 cut(s) 252, 401, 743, 1323, 1802
BmcAI AGTACT 1 cut(s) 1682
Bme1390I CCNGG 4 cut(s) 726, 955, 956, 1212
Bme18I GGWCC 1 cut(s) 1073
BmeRI GACNNNNNGTC 1 cut(s) 997
BmeT110I CYCGRG 2 cut(s) 946, 954
BmgT120I GGNCC 3 cut(s) 242, 1073, 1256
BmiI GGNNCC 1 cut(s) 952
BmrFI CCNGG 4 cut(s) 726, 955, 956, 1212
BmrI ACTGGG 2 cut(s) 673, 1871
BmsI GCATC 1 cut(s) 4
BmuI ACTGGG 2 cut(s) 673, 1871
BpiI GAAGAC 1 cut(s) 742
BpmI CTGGAG 1 cut(s) 119
BpuEI CTTGAG 2 cut(s) 907, 1763
BpuMI CCSGG 3 cut(s) 726, 955, 956
BsaAI YACGTR 2 cut(s) 1470, 1611
BsaBI GATNNNNATC 1 cut(s) 1733
BsaI GGTCTC 2 cut(s) 1017, 1284
BsaJI CCNNGG 5 cut(s) 614, 954, 1211, 1404, 1414
BsaWI WCCGGW 1 cut(s) 258
BsaXI ACNNNNNCTCC 2 cut(s) 16, 46
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1292
Bse118I RCCGGY 3 cut(s) 244, 375, 1151
Bse1I ACTGG 4 cut(s) 668, 1250, 1678, 1877
Bse3DI GCAATG 3 cut(s) 1011, 1107, 1207
Bse8I GATNNNNATC 1 cut(s) 1733
BseBI CCWGG 1 cut(s) 1212
BseDI CCNNGG 5 cut(s) 614, 954, 1211, 1404, 1414
BseGI GGATG 6 cut(s) 19, 167, 429, 1168, 1207, 1231
BseJI GATNNNNATC 1 cut(s) 1733
BseLI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1292
BseMI GCAATG 3 cut(s) 1011, 1107, 1207
BseMII CTCAG 3 cut(s) 30, 1295, 1608
BseNI ACTGG 4 cut(s) 668, 1250, 1678, 1877
BseRI GAGGAG 6 cut(s) 37, 116, 520, 667, 1232, 1235
BseXI GCAGC 1 cut(s) 728
BseYI CCCAGC 1 cut(s) 1537
BsgI GTGCAG 1 cut(s) 1480
Bsh1236I CGCG 2 cut(s) 399, 1803
Bsh1285I CGRYCG 2 cut(s) 939, 1515
BshFI GGCC 3 cut(s) 244, 729, 1257
BsiEI CGRYCG 2 cut(s) 939, 1515
BsiHKAI GWGCWC 1 cut(s) 1625
BsiHKCI CYCGRG 2 cut(s) 946, 954
BsiSI CCGG 6 cut(s) 245, 259, 376, 726, 955, 1152
BsiWI CGTACG 1 cut(s) 1466
BslFI GGGAC 4 cut(s) 178, 797, 984, 1865
BslI CCNNNNNNNGG 6 cut(s) 24, 100, 382, 736, 1096, 1292
BsmAI GTCTC 3 cut(s) 98, 1017, 1284
BsmBI CGTCTC 1 cut(s) 98
BsmFI GGGAC 4 cut(s) 178, 797, 984, 1865
BsmI GAATGC 1 cut(s) 1829
BsnI GGCC 3 cut(s) 244, 729, 1257
Bso31I GGTCTC 2 cut(s) 1017, 1284
BsoBI CYCGRG 2 cut(s) 946, 954
Bsp1286I GDGCHC 1 cut(s) 1625
Bsp143I GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
BspACI CCGC 8 cut(s) 250, 399, 449, 1321, 1453, 1511, 1693, 1801
BspANI GGCC 3 cut(s) 244, 729, 1257
BspCNI CTCAG 3 cut(s) 31, 1294, 1609
BspFNI CGCG 2 cut(s) 399, 1803
BspHI TCATGA 1 cut(s) 79
BspLI GGNNCC 1 cut(s) 952
BspMAI CTGCAG 1 cut(s) 1030
BspMI ACCTGC 3 cut(s) 590, 1098, 1846
BspPI GGATC 5 cut(s) 431, 524, 605, 1581, 1742
BspTNI GGTCTC 2 cut(s) 1017, 1284
BsrBI CCGCTC 1 cut(s) 1693
BsrDI GCAATG 3 cut(s) 1011, 1107, 1207
BsrFI RCCGGY 3 cut(s) 244, 375, 1151
BsrI ACTGG 4 cut(s) 668, 1250, 1678, 1877
BssAI RCCGGY 3 cut(s) 244, 375, 1151
BssECI CCNNGG 5 cut(s) 614, 954, 1211, 1404, 1414
BssMI GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
BssSI CACGAG 1 cut(s) 1911
BssT1I CCWWGG 2 cut(s) 614, 1414
Bst2BI CACGAG 1 cut(s) 1911
Bst2UI CCWGG 1 cut(s) 1212
Bst4CI ACNGT 7 cut(s) 355, 762, 1067, 1265, 1339, 1604, 1633
Bst6I CTCTTC 5 cut(s) 62, 864, 908, 1026, 1800
BstAPI GCANNNNNTGC 1 cut(s) 1508
BstBAI YACGTR 2 cut(s) 1470, 1611
BstC8I GCNNGC 2 cut(s) 573, 1427
BstDEI CTNAG 4 cut(s) 39, 1156, 1281, 1617
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 6 cut(s) 19, 167, 429, 1168, 1207, 1231
BstFNI CGCG 2 cut(s) 399, 1803
BstHHI GCGC 1 cut(s) 571
BstKTI GATC 8 cut(s) 330, 439, 532, 613, 935, 1576, 1737, 1867
BstMAI GTCTC 3 cut(s) 98, 1017, 1284
BstMBI GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
BstMCI CGRYCG 2 cut(s) 939, 1515
BstMWI GCNNNNNNNGC 4 cut(s) 182, 250, 1508, 1586
BstNI CCWGG 1 cut(s) 1212
BstNSI RCATGY 3 cut(s) 1000, 1491, 1676
BstSCI CCNGG 4 cut(s) 724, 953, 954, 1210
BstSFI CTRYAG 2 cut(s) 186, 1026
BstSNI TACGTA 1 cut(s) 1470
BstUI CGCG 2 cut(s) 399, 1803
BstV1I GCAGC 1 cut(s) 728
BstV2I GAAGAC 1 cut(s) 742
BstX2I RGATCY 2 cut(s) 610, 1573
BstYI RGATCY 2 cut(s) 610, 1573
BsuI GTATCC 2 cut(s) 421, 1623
BsuRI GGCC 3 cut(s) 244, 729, 1257
BtsCI GGATG 6 cut(s) 19, 167, 429, 1168, 1207, 1231
BtsI GCAGTG 2 cut(s) 1023, 1303
BtsIMutI CAGTG 4 cut(s) 1023, 1270, 1303, 1335
BveI ACCTGC 3 cut(s) 590, 1098, 1846
Cac8I GCNNGC 2 cut(s) 573, 1427
CaiI CAGNNNCTG 1 cut(s) 144
CciI TCATGA 1 cut(s) 79
CfoI GCGC 1 cut(s) 571
Cfr10I RCCGGY 3 cut(s) 244, 375, 1151
Cfr13I GGNCC 3 cut(s) 242, 1073, 1256
Cfr9I CCCGGG 1 cut(s) 954
CseI GACGC 2 cut(s) 115, 180
Csp6I GTAC 6 cut(s) 324, 1063, 1467, 1600, 1645, 1681
CspCI CAANNNNNGTGG 2 cut(s) 969, 1004
CviQI GTAC 6 cut(s) 324, 1063, 1467, 1600, 1645, 1681
DdeI CTNAG 4 cut(s) 39, 1156, 1281, 1617
DpnI GATC 8 cut(s) 329, 438, 531, 612, 934, 1575, 1736, 1866
DpnII GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
DraI TTTAAA 1 cut(s) 181
DriI GACNNNNNGTC 1 cut(s) 997
EaeI YGGCCR 1 cut(s) 727
Eam1104I CTCTTC 5 cut(s) 62, 864, 908, 1026, 1800
Eam1105I GACNNNNNGTC 1 cut(s) 997
EarI CTCTTC 5 cut(s) 62, 864, 908, 1026, 1800
Ecl136II GAGCTC 1 cut(s) 1623
Eco105I TACGTA 1 cut(s) 1470
Eco130I CCWWGG 2 cut(s) 614, 1414
Eco24I GRGCYC 1 cut(s) 1625
Eco31I GGTCTC 2 cut(s) 1017, 1284
Eco47I GGWCC 1 cut(s) 1073
Eco53kI GAGCTC 1 cut(s) 1623
Eco57I CTGAAG 2 cut(s) 1341, 1394
Eco88I CYCGRG 2 cut(s) 946, 954
EcoICRI GAGCTC 1 cut(s) 1623
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoRI GAATTC 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 1210
EcoT14I CCWWGG 2 cut(s) 614, 1414
EcoT38I GRGCYC 1 cut(s) 1625
ErhI CCWWGG 2 cut(s) 614, 1414
Esp3I CGTCTC 1 cut(s) 98
FaqI GGGAC 4 cut(s) 178, 797, 984, 1865
FauI CCCGC 1 cut(s) 1446
FauNDI CATATG 1 cut(s) 1527
FbaI TGATCA 1 cut(s) 1864
Fnu4HI GCNGC 5 cut(s) 251, 400, 742, 1322, 1801
FokI GGATG 6 cut(s) 26, 174, 416, 1175, 1194, 1238
FriOI GRGCYC 1 cut(s) 1625
Fsp4HI GCNGC 5 cut(s) 251, 400, 742, 1322, 1801
FspBI CTAG 4 cut(s) 1049, 1386, 1415, 1577
GlaI GCGC 1 cut(s) 570
GluI GCNGC 5 cut(s) 251, 400, 742, 1322, 1801
GsaI CCCAGC 1 cut(s) 1541
GsuI CTGGAG 1 cut(s) 119
HaeIII GGCC 3 cut(s) 244, 729, 1257
HapII CCGG 6 cut(s) 245, 259, 376, 726, 955, 1152
HgaI GACGC 2 cut(s) 115, 180
HhaI GCGC 1 cut(s) 571
Hin6I GCGC 1 cut(s) 569
HinP1I GCGC 1 cut(s) 569
HinfI GANTC 8 cut(s) 59, 223, 842, 1118, 1444, 1531, 1649, 1790
HpaII CCGG 6 cut(s) 245, 259, 376, 726, 955, 1152
HphI GGTGA 3 cut(s) 643, 1138, 1874
Hpy166II GTNNAC 4 cut(s) 136, 991, 1231, 1753
Hpy188I TCNGA 8 cut(s) 58, 526, 714, 1175, 1360, 1558, 1573, 1670
Hpy8I GTNNAC 4 cut(s) 136, 991, 1231, 1753
HpyAV CCTTC 8 cut(s) 205, 358, 628, 825, 1187, 1365, 1387, 1413
HpyCH4III ACNGT 7 cut(s) 355, 762, 1067, 1265, 1339, 1604, 1633
HpyCH4IV ACGT 4 cut(s) 31, 1469, 1610, 1854
HpyCH4V TGCA 8 cut(s) 47, 288, 1004, 1028, 1429, 1461, 1827, 1841
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 250, 1508, 1586
HpyF3I CTNAG 4 cut(s) 39, 1156, 1281, 1617
HpySE526I ACGT 4 cut(s) 31, 1469, 1610, 1854
HspAI GCGC 1 cut(s) 569
Ksp22I TGATCA 1 cut(s) 1864
Kzo9I GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
LmnI GCTCC 3 cut(s) 1422, 1585, 1628
Lsp1109I GCAGC 1 cut(s) 728
LweI GCATC 1 cut(s) 4
MaeI CTAG 4 cut(s) 1049, 1386, 1415, 1577
MaeII ACGT 4 cut(s) 31, 1469, 1610, 1854
MaeIII GTNAC 4 cut(s) 164, 907, 1110, 1147
MalI GATC 8 cut(s) 329, 438, 531, 612, 934, 1575, 1736, 1866
MbiI CCGCTC 1 cut(s) 1693
MboI GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
MboII GAAGA 9 cut(s) 79, 136, 742, 881, 925, 1043, 1321, 1545, 1817
MfeI CAATTG 1 cut(s) 1188
MflI RGATCY 2 cut(s) 610, 1573
MhlI GDGCHC 1 cut(s) 1625
MluCI AATT 8 cut(s) 52, 150, 230, 304, 465, 686, 798, 1188
MlyI GAGTC 3 cut(s) 851, 1540, 1643
MmeI TCCRAC 4 cut(s) 279, 672, 1021, 1110
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 6 cut(s) 180, 272, 309, 702, 1290, 1520
MslI CAYNNNNRTG 2 cut(s) 1367, 1486
MspI CCGG 6 cut(s) 245, 259, 376, 726, 955, 1152
MspR9I CCNGG 4 cut(s) 726, 955, 956, 1212
MunI CAATTG 1 cut(s) 1188
Mva1269I GAATGC 1 cut(s) 1829
MvaI CCWGG 1 cut(s) 1212
MvnI CGCG 2 cut(s) 399, 1803
MwoI GCNNNNNNNGC 4 cut(s) 182, 250, 1508, 1586
NciI CCSGG 3 cut(s) 726, 955, 956
NdeI CATATG 1 cut(s) 1527
NdeII GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
NlaIV GGNNCC 1 cut(s) 952
NmeAIII GCCGAG 2 cut(s) 43, 1429
NmuCI GTSAC 2 cut(s) 164, 1147
NspI RCATGY 3 cut(s) 1000, 1491, 1676
PagI TCATGA 1 cut(s) 79
PciI ACATGT 2 cut(s) 996, 1672
PctI GAATGC 1 cut(s) 1829
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 5 cut(s) 59, 223, 1118, 1444, 1790
Pfl23II CGTACG 1 cut(s) 1466
PkrI GCNGC 5 cut(s) 252, 401, 743, 1323, 1802
PleI GAGTC 3 cut(s) 850, 1539, 1643
PpsI GAGTC 3 cut(s) 850, 1539, 1643
Ppu21I YACGTR 2 cut(s) 1470, 1611
PscI ACATGT 2 cut(s) 996, 1672
PsiI TTATAA 1 cut(s) 660
Psp124BI GAGCTC 1 cut(s) 1625
Psp6I CCWGG 1 cut(s) 1210
PspFI CCCAGC 1 cut(s) 1537
PspGI CCWGG 1 cut(s) 1210
PspLI CGTACG 1 cut(s) 1466
PspN4I GGNNCC 1 cut(s) 952
PspPI GGNCC 3 cut(s) 242, 1073, 1256
PstI CTGCAG 1 cut(s) 1030
PstNI CAGNNNCTG 1 cut(s) 144
PsuI RGATCY 2 cut(s) 610, 1573
RsaI GTAC 6 cut(s) 325, 1064, 1468, 1601, 1646, 1682
RsaNI GTAC 6 cut(s) 324, 1063, 1467, 1600, 1645, 1681
RseI CAYNNNNRTG 2 cut(s) 1367, 1486
SacI GAGCTC 1 cut(s) 1625
SaqAI TTAA 6 cut(s) 180, 272, 309, 702, 1290, 1520
SatI GCNGC 5 cut(s) 251, 400, 742, 1322, 1801
Sau3AI GATC 8 cut(s) 327, 436, 529, 610, 932, 1573, 1734, 1864
Sau96I GGNCC 3 cut(s) 242, 1073, 1256
ScaI AGTACT 1 cut(s) 1682
SchI GAGTC 3 cut(s) 851, 1540, 1643
ScrFI CCNGG 4 cut(s) 726, 955, 956, 1212
SduI GDGCHC 1 cut(s) 1625
SfaNI GCATC 1 cut(s) 4
SfcI CTRYAG 2 cut(s) 186, 1026
SinI GGWCC 1 cut(s) 1073
SmaI CCCGGG 1 cut(s) 956
SmiMI CAYNNNNRTG 2 cut(s) 1367, 1486
SmlI CTYRAG 2 cut(s) 922, 1742
SmoI CTYRAG 2 cut(s) 922, 1742
SnaBI TACGTA 1 cut(s) 1470
Sse9I AATT 8 cut(s) 52, 150, 230, 304, 465, 686, 798, 1188
SsiI CCGC 8 cut(s) 250, 399, 449, 1321, 1453, 1511, 1693, 1801
SspMI CTAG 4 cut(s) 1049, 1386, 1415, 1577
SstI GAGCTC 1 cut(s) 1625
StyD4I CCNGG 4 cut(s) 724, 953, 954, 1210
StyI CCWWGG 2 cut(s) 614, 1414
TaaI ACNGT 7 cut(s) 355, 762, 1067, 1265, 1339, 1604, 1633
TaiI ACGT 4 cut(s) 34, 1472, 1613, 1857
TaqI TCGA 4 cut(s) 203, 845, 935, 1244
TaqII GACCGA 1 cut(s) 953
TasI AATT 8 cut(s) 52, 150, 230, 304, 465, 686, 798, 1188
TatI WGTACW 1 cut(s) 1680
TauI GCSGC 4 cut(s) 253, 402, 1324, 1803
TfiI GAWTC 5 cut(s) 59, 223, 1118, 1444, 1790
Tru1I TTAA 6 cut(s) 180, 272, 309, 702, 1290, 1520
Tru9I TTAA 6 cut(s) 180, 272, 309, 702, 1290, 1520
TscAI CASTG 4 cut(s) 1030, 1270, 1303, 1342
TseFI GTSAC 2 cut(s) 164, 1147
TseI GCWGC 1 cut(s) 741
Tsp45I GTSAC 2 cut(s) 164, 1147
TspDTI ATGAA 6 cut(s) 96, 784, 873, 1196, 1778, 1913
TspGWI ACGGA 1 cut(s) 1172
TspMI CCCGGG 1 cut(s) 954
TspRI CASTG 4 cut(s) 1030, 1270, 1303, 1342
VpaK11BI GGWCC 1 cut(s) 1073
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 2 cut(s) 52, 150
XceI RCATGY 3 cut(s) 1000, 1491, 1676
XmaI CCCGGG 1 cut(s) 954
XmaJI CCTAGG 1 cut(s) 1414
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 4 cut(s) 1049, 1386, 1415, 1577
ZrmI AGTACT 1 cut(s) 1682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.