Rw1G007140

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
15009024 .. 15010706
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G007140.1

Sequence Viewer

Length: 1341 bp
ATGGATGGAAGAGAAATCGTGATCTTAATTTCCCGAAGCAGGAACGATGCACTCTGCGCTATTGACACGCAAACTGAAGGTAATGACCGGAAGCGGAAGAATGAAAAGCATAATGAAGAAAACAAGGTGACCGAGACTGTCGTTGAAGTGTCAACTGGGTCAGGAATTGATGATTGTATGACATTATCTGGTGGTAACGAAGAATCAGGCAGTCAGGTTACAATGAGGACAGCATGCCGAGGAAAACACTTCACAAAAACTATGTCTTCCCTATCGGCTGGAAAGTTAGTTGCAACAATAGAAATGGGGTTTGGATCACTTTACCAATTTGGCTGTACCAAAGTGAATCTCCCACTTTGTCAAATACTGGTTGAAAATTTTGACGTGGCGAACTCAAGCATCAAGATTCATGGAAGGAGCCTGACAATCAAACATGAAGACTTTGAACGCATAATGGGCGTAAGGAATGGAGGTTGTGATGTGGAGGTTGAAGGAAACACCGAGGACCCTGATATTTTGGCCATGGAGAGGAAGATTTCGAGGAAGGAGAATCAGATAACAATACATGGATTGAGGAGGGTGCTCATTGAATTGAAAGCGCTGATGAGACATTTAGGATCAACTTTGCCTTGGGTGTCATCGTTTCAGGGCACGAGGATTAGATTGGCCGGAGATTGTATTTTGTTCCTTCAATTGTTCTACCTCGACGTTGTTAGCAACGACATGTTTGTTTTGCCGAAGATCGTGAAGCCGGTTATGTGTTGGGGCATGAACGAGGCGAAGAAAGTTTATGAGCAGGTGGAGAGCATGGGCGGATGGAAAAGTGAGATTTACGTGACAAAGAGGTATCTGTGGGACAGAACAATTCAATACAATGGATCGTTTGATGCCAGCACAGGGATAAAAACCAATGTGGTGGAAGACTTGTCAGAAGTGAGGCCTGAGGTGGGTGTTGTTAAAGGGGACATCGAGAATCTGAAGTCAACAGTCGGTCGATTGGAACAGGATATGGGCCGTTTGAGAAGCGCAATTATGATGTTAGAAACATCGCTTGATCAGCAGAAGGCTGAGGGCCTCTCCCAGCTTGTGTCAGACGCTATGAAAGGAGTGTTTGAGGATAAGCAGAGTGATTATGTTGGCAATGATGGGAGTGATGATTTTGCTGATGGTCAAAAGCAGCAGGGTCCAGAAGTTGAGTCAGATGACGATGGGATGCCTAATGCTGAGTCAAAAATTGAAAGCGATCCTGATTCCAGAAAATTTACACACGGACTAATAACAACATTAAGTAAGAATAGTACAATTTTATACAATATGGAATACCACAATAGAGTAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

446

Amino Acids

49.82

Weight (kDa)

5.22

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 787
Acc36I ACCTGC 1 cut(s) 787
AciI CCGC 2 cut(s) 94, 813
AclWI GGATC 4 cut(s) 322, 625, 886, 1238
AcoI YGGCCR 2 cut(s) 519, 666
AcsI RAATTY 2 cut(s) 376, 1259
AcuI CTGAAG 2 cut(s) 96, 998
AfaI GTAC 2 cut(s) 337, 1300
AfeI AGCGCT 1 cut(s) 600
AfiI CCNNNNNNNGG 4 cut(s) 39, 528, 897, 947
AflIII ACRYGT 1 cut(s) 723
AgsI TTSAA 9 cut(s) 146, 374, 446, 491, 590, 595, 692, 869, 1238
AjiI CACGTC 1 cut(s) 385
AjuI GAANNNNNNNTTGG 2 cut(s) 294, 326
AluBI AGCT 1 cut(s) 1084
AluI AGCT 1 cut(s) 1084
Alw21I GWGCWC 1 cut(s) 585
Alw26I GTCTC 2 cut(s) 128, 601
AlwI GGATC 4 cut(s) 322, 625, 886, 1238
Aor51HI AGCGCT 1 cut(s) 600
AoxI GGCC 5 cut(s) 519, 666, 938, 1012, 1072
ApeKI GCWGC 1 cut(s) 1177
ApoI RAATTY 2 cut(s) 376, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
AspLEI GCGC 3 cut(s) 59, 601, 1028
AspS9I GGNCC 4 cut(s) 505, 1012, 1072, 1184
AsuHPI GGTGA 1 cut(s) 139
AvaII GGWCC 2 cut(s) 505, 1184
AxyI CCTNAGG 1 cut(s) 942
BaeGI GKGCMC 1 cut(s) 653
BalI TGGCCA 1 cut(s) 521
BauI CACGAG 1 cut(s) 652
BbsI GAAGAC 3 cut(s) 258, 444, 927
Bbv12I GWGCWC 1 cut(s) 585
BbvCI CCTCAGC 1 cut(s) 1068
BbvI GCAGC 1 cut(s) 1189
BccI CCATC 4 cut(s) 810, 1139, 1160, 1202
BceAI ACGGC 1 cut(s) 999
BclI TGATCA 1 cut(s) 1054
BcoDI GTCTC 2 cut(s) 128, 601
BfoI RGCGCY 1 cut(s) 602
BfuAI ACCTGC 1 cut(s) 787
BisI GCNGC 1 cut(s) 1178
BlsI GCNGC 1 cut(s) 1179
Bme18I GGWCC 2 cut(s) 505, 1184
BmgBI CACGTC 1 cut(s) 385
BmgT120I GGNCC 4 cut(s) 505, 1012, 1072, 1184
BmiI GGNNCC 3 cut(s) 419, 507, 1185
BmrI ACTGGG 1 cut(s) 165
BmsI GCATC 4 cut(s) 37, 408, 877, 1203
BmuI ACTGGG 1 cut(s) 165
BpiI GAAGAC 3 cut(s) 258, 444, 927
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
Bpu10I CCTNAGC 1 cut(s) 1068
BpuEI CTTGAG 1 cut(s) 379
BsaAI YACGTR 1 cut(s) 835
BsaJI CCNNGG 4 cut(s) 238, 501, 522, 629
BsaWI WCCGGW 1 cut(s) 87
Bsc4I CCNNNNNNNGG 4 cut(s) 39, 528, 897, 947
Bse118I RCCGGY 1 cut(s) 751
Bse1I ACTGG 2 cut(s) 160, 372
Bse21I CCTNAGG 1 cut(s) 942
Bse3DI GCAATG 1 cut(s) 1147
BseDI CCNNGG 4 cut(s) 238, 501, 522, 629
BseGI GGATG 3 cut(s) 10, 821, 1218
BseLI CCNNNNNNNGG 4 cut(s) 39, 528, 897, 947
BseMI GCAATG 1 cut(s) 1147
BseMII CTCAG 3 cut(s) 933, 1059, 1215
BseNI ACTGG 2 cut(s) 160, 372
BseRI GAGGAG 1 cut(s) 589
BseSI GKGCMC 1 cut(s) 653
BseXI GCAGC 1 cut(s) 1189
BseYI CCCAGC 1 cut(s) 1080
Bsh1285I CGRYCG 1 cut(s) 994
BshFI GGCC 5 cut(s) 521, 668, 940, 1014, 1074
BsiEI CGRYCG 1 cut(s) 994
BsiHKAI GWGCWC 1 cut(s) 585
BsiSI CCGG 3 cut(s) 88, 669, 752
BslFI GGGAC 2 cut(s) 869, 977
BslI CCNNNNNNNGG 4 cut(s) 39, 528, 897, 947
BsmAI GTCTC 2 cut(s) 128, 601
BsmFI GGGAC 2 cut(s) 869, 977
BsnI GGCC 5 cut(s) 521, 668, 940, 1014, 1074
Bsp1286I GDGCHC 2 cut(s) 585, 653
Bsp143I GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
Bsp19I CCATGG 1 cut(s) 522
BspACI CCGC 2 cut(s) 94, 813
BspANI GGCC 5 cut(s) 521, 668, 940, 1014, 1074
BspCNI CTCAG 3 cut(s) 934, 1060, 1216
BspLI GGNNCC 3 cut(s) 419, 507, 1185
BspMI ACCTGC 1 cut(s) 787
BspPI GGATC 4 cut(s) 322, 625, 886, 1238
BsrDI GCAATG 1 cut(s) 1147
BsrFI RCCGGY 1 cut(s) 751
BsrI ACTGG 2 cut(s) 160, 372
BssAI RCCGGY 1 cut(s) 751
BssECI CCNNGG 4 cut(s) 238, 501, 522, 629
BssMI GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
BssSI CACGAG 1 cut(s) 652
BssT1I CCWWGG 2 cut(s) 522, 629
Bst2BI CACGAG 1 cut(s) 652
Bst4CI ACNGT 2 cut(s) 139, 988
Bst6I CTCTTC 1 cut(s) 4
BstBAI YACGTR 1 cut(s) 835
BstC8I GCNNGC 2 cut(s) 235, 892
BstDEI CTNAG 3 cut(s) 942, 1068, 1224
BstDSI CCRYGG 1 cut(s) 522
BstEII GGTNACC 1 cut(s) 127
BstF5I GGATG 3 cut(s) 10, 821, 1218
BstH2I RGCGCY 1 cut(s) 602
BstHHI GCGC 3 cut(s) 59, 601, 1028
BstKTI GATC 7 cut(s) 24, 317, 620, 744, 881, 1057, 1246
BstMAI GTCTC 2 cut(s) 128, 601
BstMBI GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
BstMCI CGRYCG 1 cut(s) 994
BstMWI GCNNNNNNNGC 3 cut(s) 56, 456, 1057
BstNSI RCATGY 2 cut(s) 237, 727
BstPI GGTNACC 1 cut(s) 127
BstSLI GKGCMC 1 cut(s) 653
BstV1I GCAGC 1 cut(s) 1189
BstV2I GAAGAC 3 cut(s) 258, 444, 927
BstXI CCANNNNNNTGG 1 cut(s) 916
Bsu36I CCTNAGG 1 cut(s) 942
BsuRI GGCC 5 cut(s) 521, 668, 940, 1014, 1074
BtgI CCRYGG 1 cut(s) 522
BtgZI GCGATG 1 cut(s) 1032
BtrI CACGTC 1 cut(s) 385
BtsCI GGATG 3 cut(s) 10, 821, 1218
BveI ACCTGC 1 cut(s) 787
Cac8I GCNNGC 2 cut(s) 235, 892
CfoI GCGC 3 cut(s) 59, 601, 1028
Cfr10I RCCGGY 1 cut(s) 751
Cfr13I GGNCC 4 cut(s) 505, 1012, 1072, 1184
CseI GACGC 1 cut(s) 1103
Csp6I GTAC 2 cut(s) 336, 1299
CviAII CATG 8 cut(s) 234, 410, 434, 523, 566, 724, 769, 808
CviQI GTAC 2 cut(s) 336, 1299
DdeI CTNAG 3 cut(s) 942, 1068, 1224
DpnI GATC 7 cut(s) 23, 316, 619, 743, 880, 1056, 1245
DpnII GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
EaeI YGGCCR 2 cut(s) 519, 666
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 828
Eco130I CCWWGG 2 cut(s) 522, 629
Eco147I AGGCCT 1 cut(s) 940
Eco47I GGWCC 2 cut(s) 505, 1184
Eco47III AGCGCT 1 cut(s) 600
Eco57I CTGAAG 2 cut(s) 96, 998
Eco81I CCTNAGG 1 cut(s) 942
Eco91I GGTNACC 1 cut(s) 127
EcoO109I RGGNCCY 2 cut(s) 505, 1072
EcoO65I GGTNACC 1 cut(s) 127
EcoT14I CCWWGG 2 cut(s) 522, 629
ErhI CCWWGG 2 cut(s) 522, 629
FaeI CATG 8 cut(s) 237, 413, 437, 526, 569, 727, 772, 811
FaqI GGGAC 2 cut(s) 869, 977
FatI CATG 8 cut(s) 233, 409, 433, 522, 565, 723, 768, 807
FbaI TGATCA 1 cut(s) 1054
Fnu4HI GCNGC 1 cut(s) 1178
FokI GGATG 3 cut(s) 17, 828, 1225
Fsp4HI GCNGC 1 cut(s) 1178
GlaI GCGC 3 cut(s) 58, 600, 1027
GluI GCNGC 1 cut(s) 1178
GsaI CCCAGC 1 cut(s) 1084
HaeII RGCGCY 1 cut(s) 602
HaeIII GGCC 5 cut(s) 521, 668, 940, 1014, 1074
HapII CCGG 3 cut(s) 88, 669, 752
HgaI GACGC 1 cut(s) 1103
HhaI GCGC 3 cut(s) 59, 601, 1028
Hin1II CATG 8 cut(s) 237, 413, 437, 526, 569, 727, 772, 811
Hin6I GCGC 3 cut(s) 57, 599, 1026
HinP1I GCGC 3 cut(s) 57, 599, 1026
HincII GTYRAC 2 cut(s) 153, 984
HindII GTYRAC 2 cut(s) 153, 984
HinfI GANTC 8 cut(s) 203, 346, 406, 550, 973, 1196, 1226, 1250
HpaII CCGG 3 cut(s) 88, 669, 752
HphI GGTGA 1 cut(s) 139
Hpy166II GTNNAC 2 cut(s) 153, 984
Hpy188I TCNGA 5 cut(s) 555, 931, 978, 1093, 1201
Hpy188III TCNNGA 9 cut(s) 19, 33, 162, 403, 745, 970, 1187, 1247, 1254
Hpy8I GTNNAC 2 cut(s) 153, 984
Hpy99I CGWCG 1 cut(s) 710
HpyAV CCTTC 6 cut(s) 71, 408, 485, 538, 698, 1057
HpyCH4III ACNGT 2 cut(s) 139, 988
HpyCH4IV ACGT 3 cut(s) 384, 708, 834
HpyCH4V TGCA 2 cut(s) 50, 293
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 456, 1057
HpyF3I CTNAG 3 cut(s) 942, 1068, 1224
HpySE526I ACGT 3 cut(s) 384, 708, 834
Hsp92II CATG 8 cut(s) 237, 413, 437, 526, 569, 727, 772, 811
HspAI GCGC 3 cut(s) 57, 599, 1026
Ksp22I TGATCA 1 cut(s) 1054
Kzo9I GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
LmnI GCTCC 1 cut(s) 417
Lsp1109I GCAGC 1 cut(s) 1189
LweI GCATC 4 cut(s) 37, 408, 877, 1203
MaeII ACGT 3 cut(s) 384, 708, 834
MaeIII GTNAC 4 cut(s) 127, 194, 217, 835
MalI GATC 7 cut(s) 23, 316, 619, 743, 880, 1056, 1245
MboI GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
MfeI CAATTG 1 cut(s) 692
MhlI GDGCHC 2 cut(s) 585, 653
MlsI TGGCCA 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 2 cut(s) 1205, 1235
Mox20I TGGCCA 1 cut(s) 521
MscI TGGCCA 1 cut(s) 521
MseI TTAA 3 cut(s) 26, 957, 1286
Msp20I TGGCCA 1 cut(s) 521
MspI CCGG 3 cut(s) 88, 669, 752
MunI CAATTG 1 cut(s) 692
MwoI GCNNNNNNNGC 3 cut(s) 56, 456, 1057
NcoI CCATGG 1 cut(s) 522
NdeII GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
NlaIII CATG 8 cut(s) 237, 413, 437, 526, 569, 727, 772, 811
NlaIV GGNNCC 3 cut(s) 419, 507, 1185
NmeAIII GCCGAG 1 cut(s) 263
NmuCI GTSAC 2 cut(s) 127, 835
NspI RCATGY 2 cut(s) 237, 727
PaeI GCATGC 1 cut(s) 237
PaqCI CACCTGC 1 cut(s) 787
PceI AGGCCT 1 cut(s) 940
PciI ACATGT 1 cut(s) 723
PfeI GAWTC 6 cut(s) 203, 346, 406, 550, 973, 1250
PkrI GCNGC 1 cut(s) 1179
PleI GAGTC 2 cut(s) 1204, 1234
PpsI GAGTC 2 cut(s) 1204, 1234
Ppu21I YACGTR 1 cut(s) 835
PpuMI RGGWCCY 1 cut(s) 505
PscI ACATGT 1 cut(s) 723
Psp5II RGGWCCY 1 cut(s) 505
PspEI GGTNACC 1 cut(s) 127
PspFI CCCAGC 1 cut(s) 1080
PspN4I GGNNCC 3 cut(s) 419, 507, 1185
PspPI GGNCC 4 cut(s) 505, 1012, 1072, 1184
PspPPI RGGWCCY 1 cut(s) 505
RsaI GTAC 2 cut(s) 337, 1300
RsaNI GTAC 2 cut(s) 336, 1299
SaqAI TTAA 3 cut(s) 26, 957, 1286
SatI GCNGC 1 cut(s) 1178
Sau3AI GATC 7 cut(s) 21, 314, 617, 741, 878, 1054, 1243
Sau96I GGNCC 4 cut(s) 505, 1012, 1072, 1184
SchI GAGTC 2 cut(s) 1205, 1235
SduI GDGCHC 2 cut(s) 585, 653
SfaNI GCATC 4 cut(s) 37, 408, 877, 1203
SinI GGWCC 2 cut(s) 505, 1184
SmlI CTYRAG 1 cut(s) 394
SmoI CTYRAG 1 cut(s) 394
SphI GCATGC 1 cut(s) 237
SseBI AGGCCT 1 cut(s) 940
SsiI CCGC 2 cut(s) 94, 813
StuI AGGCCT 1 cut(s) 940
StyI CCWWGG 2 cut(s) 522, 629
TaaI ACNGT 2 cut(s) 139, 988
TaiI ACGT 3 cut(s) 387, 711, 837
TaqI TCGA 4 cut(s) 539, 705, 969, 994
TaqII GACCGA 2 cut(s) 146, 980
TatI WGTACW 1 cut(s) 1298
TfiI GAWTC 6 cut(s) 203, 346, 406, 550, 973, 1250
Tru1I TTAA 3 cut(s) 26, 957, 1286
Tru9I TTAA 3 cut(s) 26, 957, 1286
TseFI GTSAC 2 cut(s) 127, 835
TseI GCWGC 1 cut(s) 1177
Tsp45I GTSAC 2 cut(s) 127, 835
TspDTI ATGAA 6 cut(s) 117, 129, 398, 450, 785, 1115
TspGWI ACGGA 1 cut(s) 1284
VpaK11BI GGWCC 2 cut(s) 505, 1184
XapI RAATTY 2 cut(s) 376, 1259
XceI RCATGY 2 cut(s) 237, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.