PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_C48 | PF02902 | 200 - 308 | 3.2e-10 | Ulp1 protease family, C-terminal catalytic domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1217 |
| AccB1I | GGYRCC | 1 cut(s) | 1217 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 722, 1129 |
| AciI | CCGC | 5 cut(s) | 112, 800, 888, 913, 1215 |
| AclWI | GGATC | 2 cut(s) | 23, 694 |
| AcoI | YGGCCR | 2 cut(s) | 301, 459 |
| AcsI | RAATTY | 4 cut(s) | 396, 566, 981, 994 |
| AcuI | CTGAAG | 2 cut(s) | 84, 251 |
| AfaI | GTAC | 8 cut(s) | 31, 276, 675, 832, 925, 1015, 1098, 1219 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 263, 722, 1129 |
| AflIII | ACRYGT | 1 cut(s) | 817 |
| AgsI | TTSAA | 6 cut(s) | 41, 105, 164, 487, 543, 565 |
| AjnI | CCWGG | 1 cut(s) | 702 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 85, 117 |
| AluBI | AGCT | 6 cut(s) | 71, 97, 371, 410, 719, 943 |
| AluI | AGCT | 6 cut(s) | 71, 97, 371, 410, 719, 943 |
| Alw21I | GWGCWC | 1 cut(s) | 362 |
| Alw26I | GTCTC | 5 cut(s) | 128, 579, 640, 786, 1198 |
| Alw44I | GTGCAC | 1 cut(s) | 358 |
| AlwI | GGATC | 2 cut(s) | 23, 694 |
| AoxI | GGCC | 3 cut(s) | 301, 379, 459 |
| ApaLI | GTGCAC | 1 cut(s) | 358 |
| ApeKI | GCWGC | 1 cut(s) | 935 |
| ApoI | RAATTY | 4 cut(s) | 396, 566, 981, 994 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 226, 258, 767, 799 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 538 |
| Asp718I | GGTACC | 1 cut(s) | 1217 |
| AspS9I | GGNCC | 2 cut(s) | 775, 1120 |
| AsuC2I | CCSGG | 1 cut(s) | 1164 |
| AsuHPI | GGTGA | 3 cut(s) | 67, 460, 1058 |
| AsuII | TTCGAA | 1 cut(s) | 245 |
| AvaII | GGWCC | 2 cut(s) | 775, 1120 |
| AxyI | CCTNAGG | 1 cut(s) | 258 |
| BaeGI | GKGCMC | 1 cut(s) | 362 |
| BalI | TGGCCA | 1 cut(s) | 303 |
| BanI | GGYRCC | 1 cut(s) | 1217 |
| BanII | GRGCYC | 1 cut(s) | 126 |
| BauI | CACGAG | 1 cut(s) | 416 |
| BbsI | GAAGAC | 3 cut(s) | 239, 843, 1067 |
| Bbv12I | GWGCWC | 1 cut(s) | 362 |
| BbvI | GCAGC | 1 cut(s) | 922 |
| BccI | CCATC | 4 cut(s) | 2, 293, 371, 1037 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 235, 269 |
| BciT130I | CCWGG | 1 cut(s) | 704 |
| BciVI | GTATCC | 1 cut(s) | 735 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcnI | CCSGG | 1 cut(s) | 1164 |
| BcoDI | GTCTC | 5 cut(s) | 128, 579, 640, 786, 1198 |
| BfaI | CTAG | 1 cut(s) | 278 |
| BfmI | CTRYAG | 3 cut(s) | 386, 879, 1179 |
| BfuI | GTATCC | 1 cut(s) | 735 |
| BisI | GCNGC | 2 cut(s) | 914, 936 |
| BlsI | GCNGC | 2 cut(s) | 915, 937 |
| Bme1390I | CCNGG | 2 cut(s) | 704, 1164 |
| Bme18I | GGWCC | 2 cut(s) | 775, 1120 |
| BmgT120I | GGNCC | 2 cut(s) | 775, 1120 |
| BmiI | GGNNCC | 2 cut(s) | 123, 1219 |
| BmrFI | CCNGG | 2 cut(s) | 704, 1164 |
| BmsI | GCATC | 1 cut(s) | 1184 |
| BpiI | GAAGAC | 3 cut(s) | 239, 843, 1067 |
| Bpu14I | TTCGAA | 1 cut(s) | 245 |
| BpuMI | CCSGG | 1 cut(s) | 1164 |
| BsaBI | GATNNNNATC | 2 cut(s) | 711, 810 |
| BsaJI | CCNNGG | 2 cut(s) | 285, 1163 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 882, 912 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 263, 722, 1129 |
| Bse1I | ACTGG | 1 cut(s) | 662 |
| Bse21I | CCTNAGG | 1 cut(s) | 258 |
| Bse8I | GATNNNNATC | 2 cut(s) | 711, 810 |
| BseBI | CCWGG | 1 cut(s) | 704 |
| BseDI | CCNNGG | 2 cut(s) | 285, 1163 |
| BseJI | GATNNNNATC | 2 cut(s) | 711, 810 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 263, 722, 1129 |
| BseMII | CTCAG | 1 cut(s) | 272 |
| BseNI | ACTGG | 1 cut(s) | 662 |
| BseSI | GKGCMC | 1 cut(s) | 362 |
| BseX3I | CGGCCG | 1 cut(s) | 459 |
| BseXI | GCAGC | 1 cut(s) | 922 |
| BseYI | CCCAGC | 1 cut(s) | 1211 |
| Bsh1285I | CGRYCG | 1 cut(s) | 462 |
| BshFI | GGCC | 3 cut(s) | 303, 381, 461 |
| BshNI | GGYRCC | 1 cut(s) | 1217 |
| BsiEI | CGRYCG | 1 cut(s) | 462 |
| BsiHKAI | GWGCWC | 1 cut(s) | 362 |
| BsiSI | CCGG | 1 cut(s) | 1163 |
| BslFI | GGGAC | 1 cut(s) | 649 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 263, 722, 1129 |
| BsmAI | GTCTC | 5 cut(s) | 128, 579, 640, 786, 1198 |
| BsmFI | GGGAC | 1 cut(s) | 649 |
| BsnI | GGCC | 3 cut(s) | 303, 381, 461 |
| Bsp119I | TTCGAA | 1 cut(s) | 245 |
| Bsp1286I | GDGCHC | 2 cut(s) | 126, 362 |
| Bsp1407I | TGTACA | 1 cut(s) | 29 |
| Bsp143I | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| BspACI | CCGC | 5 cut(s) | 112, 800, 888, 913, 1215 |
| BspANI | GGCC | 3 cut(s) | 303, 381, 461 |
| BspCNI | CTCAG | 1 cut(s) | 271 |
| BspLI | GGNNCC | 2 cut(s) | 123, 1219 |
| BspMAI | CTGCAG | 2 cut(s) | 390, 1183 |
| BspPI | GGATC | 2 cut(s) | 23, 694 |
| BspT104I | TTCGAA | 1 cut(s) | 245 |
| BspT107I | GGYRCC | 1 cut(s) | 1217 |
| BsrGI | TGTACA | 1 cut(s) | 29 |
| BsrI | ACTGG | 1 cut(s) | 662 |
| BssECI | CCNNGG | 2 cut(s) | 285, 1163 |
| BssMI | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| BssSI | CACGAG | 1 cut(s) | 416 |
| BssT1I | CCWWGG | 1 cut(s) | 285 |
| Bst2BI | CACGAG | 1 cut(s) | 416 |
| Bst2UI | CCWGG | 1 cut(s) | 704 |
| Bst4CI | ACNGT | 6 cut(s) | 29, 168, 253, 779, 1150, 1255 |
| BstAUI | TGTACA | 1 cut(s) | 29 |
| BstBI | TTCGAA | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 2 cut(s) | 1006, 1053 |
| BstDEI | CTNAG | 2 cut(s) | 258, 327 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 261 |
| BstKTI | GATC | 4 cut(s) | 18, 430, 702, 1105 |
| BstMAI | GTCTC | 5 cut(s) | 128, 579, 640, 786, 1198 |
| BstMBI | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| BstMCI | CGRYCG | 1 cut(s) | 462 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 758, 1159 |
| BstNI | CCWGG | 1 cut(s) | 704 |
| BstNSI | RCATGY | 4 cut(s) | 695, 821, 1008, 1112 |
| BstSCI | CCNGG | 2 cut(s) | 702, 1162 |
| BstSFI | CTRYAG | 3 cut(s) | 386, 879, 1179 |
| BstSLI | GKGCMC | 1 cut(s) | 362 |
| BstV1I | GCAGC | 1 cut(s) | 922 |
| BstV2I | GAAGAC | 3 cut(s) | 239, 843, 1067 |
| BstX2I | RGATCY | 1 cut(s) | 699 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 946 |
| BstYI | RGATCY | 1 cut(s) | 699 |
| BstZI | CGGCCG | 1 cut(s) | 459 |
| Bsu36I | CCTNAGG | 1 cut(s) | 258 |
| BsuI | GTATCC | 1 cut(s) | 735 |
| BsuRI | GGCC | 3 cut(s) | 303, 381, 461 |
| BtgZI | GCGATG | 1 cut(s) | 776 |
| BtsIMutI | CAGTG | 4 cut(s) | 25, 32, 249, 655 |
| Cac8I | GCNNGC | 2 cut(s) | 1006, 1053 |
| Cfr13I | GGNCC | 2 cut(s) | 775, 1120 |
| Csp6I | GTAC | 8 cut(s) | 30, 275, 674, 831, 924, 1014, 1097, 1218 |
| CviQI | GTAC | 8 cut(s) | 30, 275, 674, 831, 924, 1014, 1097, 1218 |
| DdeI | CTNAG | 2 cut(s) | 258, 327 |
| DpnI | GATC | 4 cut(s) | 17, 429, 701, 1104 |
| DpnII | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| DraI | TTTAAA | 1 cut(s) | 810 |
| EaeI | YGGCCR | 2 cut(s) | 301, 459 |
| EagI | CGGCCG | 1 cut(s) | 459 |
| EclXI | CGGCCG | 1 cut(s) | 459 |
| Eco130I | CCWWGG | 1 cut(s) | 285 |
| Eco24I | GRGCYC | 1 cut(s) | 126 |
| Eco47I | GGWCC | 2 cut(s) | 775, 1120 |
| Eco52I | CGGCCG | 1 cut(s) | 459 |
| Eco57I | CTGAAG | 2 cut(s) | 84, 251 |
| Eco81I | CCTNAGG | 1 cut(s) | 258 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 261 |
| EcoRII | CCWGG | 1 cut(s) | 702 |
| EcoT14I | CCWWGG | 1 cut(s) | 285 |
| EcoT22I | ATGCAT | 1 cut(s) | 627 |
| EcoT38I | GRGCYC | 1 cut(s) | 126 |
| ErhI | CCWWGG | 1 cut(s) | 285 |
| FaqI | GGGAC | 1 cut(s) | 649 |
| FauNDI | CATATG | 1 cut(s) | 432 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 2 cut(s) | 914, 936 |
| FriOI | GRGCYC | 1 cut(s) | 126 |
| Fsp4HI | GCNGC | 2 cut(s) | 914, 936 |
| FspBI | CTAG | 1 cut(s) | 278 |
| GluI | GCNGC | 2 cut(s) | 914, 936 |
| GsaI | CCCAGC | 1 cut(s) | 1215 |
| HaeIII | GGCC | 3 cut(s) | 303, 381, 461 |
| HapII | CCGG | 1 cut(s) | 1163 |
| HindIII | AAGCTT | 1 cut(s) | 95 |
| HinfI | GANTC | 7 cut(s) | 200, 281, 455, 491, 551, 1037, 1202 |
| HpaII | CCGG | 1 cut(s) | 1163 |
| HphI | GGTGA | 3 cut(s) | 67, 460, 1058 |
| Hpy166II | GTNNAC | 4 cut(s) | 32, 315, 360, 1120 |
| Hpy188I | TCNGA | 9 cut(s) | 20, 64, 178, 231, 403, 1042, 1198, 1251, 1259 |
| Hpy188III | TCNNGA | 1 cut(s) | 1232 |
| Hpy8I | GTNNAC | 4 cut(s) | 32, 315, 360, 1120 |
| HpyAV | CCTTC | 8 cut(s) | 35, 178, 392, 415, 439, 490, 541, 626 |
| HpyCH4III | ACNGT | 6 cut(s) | 29, 168, 253, 779, 1150, 1255 |
| HpyCH4IV | ACGT | 1 cut(s) | 754 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 758, 1159 |
| HpyF3I | CTNAG | 2 cut(s) | 258, 327 |
| HpySE526I | ACGT | 1 cut(s) | 754 |
| KpnI | GGTACC | 1 cut(s) | 1221 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| LmnI | GCTCC | 2 cut(s) | 121, 415 |
| Lsp1109I | GCAGC | 1 cut(s) | 922 |
| LweI | GCATC | 1 cut(s) | 1184 |
| MaeI | CTAG | 1 cut(s) | 278 |
| MaeII | ACGT | 1 cut(s) | 754 |
| MaeIII | GTNAC | 2 cut(s) | 448, 1243 |
| MalI | GATC | 4 cut(s) | 17, 429, 701, 1104 |
| MboI | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| MboII | GAAGA | 6 cut(s) | 244, 641, 815, 843, 1067, 1070 |
| MflI | RGATCY | 1 cut(s) | 699 |
| MhlI | GDGCHC | 2 cut(s) | 126, 362 |
| MlsI | TGGCCA | 1 cut(s) | 303 |
| MluCI | AATT | 8 cut(s) | 159, 307, 396, 566, 605, 950, 981, 994 |
| MluNI | TGGCCA | 1 cut(s) | 303 |
| MlyI | GAGTC | 3 cut(s) | 485, 545, 1196 |
| MmeI | TCCRAC | 4 cut(s) | 753, 892, 1047, 1230 |
| MnlI | CCTC | 4 cut(s) | 51, 267, 283, 1134 |
| Mox20I | TGGCCA | 1 cut(s) | 303 |
| Mph1103I | ATGCAT | 1 cut(s) | 627 |
| MroXI | GAANNNNTTC | 1 cut(s) | 538 |
| MscI | TGGCCA | 1 cut(s) | 303 |
| MseI | TTAA | 4 cut(s) | 222, 501, 809, 957 |
| MslI | CAYNNNNRTG | 2 cut(s) | 620, 1009 |
| Msp20I | TGGCCA | 1 cut(s) | 303 |
| MspA1I | CMGCKG | 1 cut(s) | 1215 |
| MspI | CCGG | 1 cut(s) | 1163 |
| MspR9I | CCNGG | 2 cut(s) | 704, 1164 |
| MvaI | CCWGG | 1 cut(s) | 704 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 758, 1159 |
| NciI | CCSGG | 1 cut(s) | 1164 |
| NdeI | CATATG | 1 cut(s) | 432 |
| NdeII | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| NlaIV | GGNNCC | 2 cut(s) | 123, 1219 |
| NmuCI | GTSAC | 2 cut(s) | 448, 1243 |
| NsiI | ATGCAT | 1 cut(s) | 627 |
| NspI | RCATGY | 4 cut(s) | 695, 821, 1008, 1112 |
| NspV | TTCGAA | 1 cut(s) | 245 |
| PaeI | GCATGC | 1 cut(s) | 1008 |
| PciI | ACATGT | 1 cut(s) | 817 |
| PdmI | GAANNNNTTC | 1 cut(s) | 538 |
| PfeI | GAWTC | 4 cut(s) | 200, 281, 455, 1037 |
| PflFI | GACNNNGTC | 1 cut(s) | 733 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 722, 1129 |
| PfoI | TCCNGGA | 1 cut(s) | 702 |
| PkrI | GCNGC | 2 cut(s) | 915, 937 |
| PleI | GAGTC | 3 cut(s) | 485, 545, 1196 |
| PpsI | GAGTC | 3 cut(s) | 485, 545, 1196 |
| PscI | ACATGT | 1 cut(s) | 817 |
| Psp6I | CCWGG | 1 cut(s) | 702 |
| PspFI | CCCAGC | 1 cut(s) | 1211 |
| PspGI | CCWGG | 1 cut(s) | 702 |
| PspN4I | GGNNCC | 2 cut(s) | 123, 1219 |
| PspPI | GGNCC | 2 cut(s) | 775, 1120 |
| PstI | CTGCAG | 2 cut(s) | 390, 1183 |
| PsuI | RGATCY | 1 cut(s) | 699 |
| PsyI | GACNNNGTC | 1 cut(s) | 733 |
| RsaI | GTAC | 8 cut(s) | 31, 276, 675, 832, 925, 1015, 1098, 1219 |
| RsaNI | GTAC | 8 cut(s) | 30, 275, 674, 831, 924, 1014, 1097, 1218 |
| RseI | CAYNNNNRTG | 2 cut(s) | 620, 1009 |
| SaqAI | TTAA | 4 cut(s) | 222, 501, 809, 957 |
| SatI | GCNGC | 2 cut(s) | 914, 936 |
| Sau3AI | GATC | 4 cut(s) | 15, 427, 699, 1102 |
| Sau96I | GGNCC | 2 cut(s) | 775, 1120 |
| SchI | GAGTC | 3 cut(s) | 485, 545, 1196 |
| ScrFI | CCNGG | 2 cut(s) | 704, 1164 |
| SduI | GDGCHC | 2 cut(s) | 126, 362 |
| SfaNI | GCATC | 1 cut(s) | 1184 |
| SfcI | CTRYAG | 3 cut(s) | 386, 879, 1179 |
| SfuI | TTCGAA | 1 cut(s) | 245 |
| SinI | GGWCC | 2 cut(s) | 775, 1120 |
| SmiI | ATTTAAAT | 1 cut(s) | 810 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 620, 1009 |
| SphI | GCATGC | 1 cut(s) | 1008 |
| Sse9I | AATT | 8 cut(s) | 159, 307, 396, 566, 605, 950, 981, 994 |
| SsiI | CCGC | 5 cut(s) | 112, 800, 888, 913, 1215 |
| SspI | AATATT | 1 cut(s) | 1024 |
| SspMI | CTAG | 1 cut(s) | 278 |
| StyD4I | CCNGG | 2 cut(s) | 702, 1162 |
| StyI | CCWWGG | 1 cut(s) | 285 |
| SwaI | ATTTAAAT | 1 cut(s) | 810 |
| TaaI | ACNGT | 6 cut(s) | 29, 168, 253, 779, 1150, 1255 |
| TaiI | ACGT | 1 cut(s) | 757 |
| TaqI | TCGA | 2 cut(s) | 245, 494 |
| TaqII | GACCGA | 1 cut(s) | 513 |
| TasI | AATT | 8 cut(s) | 159, 307, 396, 566, 605, 950, 981, 994 |
| TatI | WGTACW | 2 cut(s) | 29, 673 |
| TauI | GCSGC | 1 cut(s) | 916 |
| TfiI | GAWTC | 4 cut(s) | 200, 281, 455, 1037 |
| Tru1I | TTAA | 4 cut(s) | 222, 501, 809, 957 |
| Tru9I | TTAA | 4 cut(s) | 222, 501, 809, 957 |
| TscAI | CASTG | 4 cut(s) | 32, 39, 256, 662 |
| TseFI | GTSAC | 2 cut(s) | 448, 1243 |
| TseI | GCWGC | 1 cut(s) | 935 |
| Tsp45I | GTSAC | 2 cut(s) | 448, 1243 |
| TspGWI | ACGGA | 2 cut(s) | 345, 606 |
| TspRI | CASTG | 4 cut(s) | 32, 39, 256, 662 |
| Tth111I | GACNNNGTC | 1 cut(s) | 733 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 722, 1129 |
| VneI | GTGCAC | 1 cut(s) | 358 |
| VpaK11BI | GGWCC | 2 cut(s) | 775, 1120 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 261 |
| XapI | RAATTY | 4 cut(s) | 396, 566, 981, 994 |
| XceI | RCATGY | 4 cut(s) | 695, 821, 1008, 1112 |
| XmnI | GAANNNNTTC | 1 cut(s) | 538 |
| XspI | CTAG | 1 cut(s) | 278 |
| Zsp2I | ATGCAT | 1 cut(s) | 627 |