Rorug06G0055100

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000030
Physical Location & Seq
Forward (+)
7579515 .. 7587021
7507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0055100.1

Sequence Viewer

Length: 1980 bp
ATGGTGGCTGCCATTTCCGACCCGACCCATCTCCAGACCCAATCTCGGCCGCCGCTTCTTCCCTCAGACAATGCCTCCTCCGCCGCCGCAGCCGTTCAACGACGCGTCGTCCTCCGCGGCAGGCAGGTCTCCTCCAAGTACATGTCCACTCCTTCTCCTTCTTCTTCAACCTCGACTTCTACCTCTACTACAGTCTCCTCCTCCGGGTCTTCCAGAAGATGCCCTTCGCCGCTGCTCTCGCGGTCTATGAACTCGTCTCCGGCGCCGAATTCGGGCCCGAAGCGGGCCCAATCGGCCGACCGGAGGCGACCCGGTACGGCCCGGACAGTACCGGAGCACCGGCTGAGCAATGCGGGTTCCGAAGTCTCCGCCGCCACCAGACTCCTCGTCACTTCCACCCGGAGCCTCTCGGTTTCGTTTCAGGGCGAGGCGTTCTCGCTTCCGATTAGTAAGACCAAGGCGGCGGTAGGGGCTGCTCCGGCGAGGAAGGCCACGCCGGAGCGGCGGAGGTCGACGCCGGTGAGAAGAGAAGGAGATCAGGTGGAGAATTCTAGGCCCTCCGGCGGTGGTGATCAGCACCGGTGGCCGGCCCGGAGTCGGCAACCGAATTCGAATTCGGGTTATTCGAACCCGAATTTGAGTAGGAGTATGGACTGTAGGAGTGTGGAGAAGAAGAGTGTGAATGTGAATAATGGGGTTGGATCTGGTGTGGTAGCTAGGGCGTTGCAGAAGTCTATGATTGAGGAGAGTAGAGGATCGAGGTCAAGATCGTCTTTTGATGGTAGGTTGAGCTTGGATTTGGGGCATTTTGGGGGCAATGCTGAGGTTTTGAGGGGCGCTCAGCACAACCCAGATGCTAATAATGAGTCTTCTGTGCCGTCTGATCTCACGGCTTCCGATACAGACAGTGTTTCTTCCGGTAGCACTTCAGGTGTTCAGGACTCCAACAATGTGGCTTCTGCCAAGGCCGCACAAGTGGCCGCCCCTCGCGGCATTGCTGTGTCTGCAAGGTTCTGGCAGGAGACGAATAGCAGGTTGCGGCGGTTGCAGGATCCCGGTTCACCTTTGGCGACTAGTCCTGTGTCGAGAGCAGGGGCGGCGGGGAAGTATATGCAGGCGAAAAAGTTGAATGGGGAGAATCCTGCGTCGTCTCCGAGGACAGTGGCTTCTCCCATTAGAGGAGCTACTAGGCCGGCTTCGCCAGGGAAGCTGTGGACGTCTTCGTCTTTGTCACCTTCGAGGGGGAATGCTAGTCCTTCAAGGGTGAGGAATAGTTTTAGTGGTCCATTGAGTAGTGGTTATGCTGCTAGTACGCCTTCGTTTCTTAGTTTCTCTATTGATACCCGGAGAGGGAAGAAGGGGGAAGACCGCATTGTTGATGCACACATGCTCCGGCTTCTGTATAACCGTTATCTGCAGTGGCGGTTTGTAAATGCAAGAGCAGATGCTACATACATGGTGCAGAGAGTGAATGCAGAGGAAAATCTTTGGAATGCATGGGTAACTATCTCAGAGCTACGACATAATGTCACACTTAAAAGGATCAAGTTACTTTTGTTGAGGCATAAGTTGAAGCTAACTTCTATCCTCAAAGGACAAATTACTTATTTGGAAGAATGGGCTCTTCTGGACAGAGATCACTCTAGTTCTTTGCTAGGAGCGAATGAAGCTTTGCAAGCCAGTACCCTTCGTCTTCCAGTCGTTGGAAAAGCAATAGTTGACTTTCAAAAGCTGAAAGATTCTGTGGGCTCAGCAGCTGATGTGATGCAGGCAATGGCATCCTCGATATGCTCGCTTTCATCAAAGGTGGAAGAAATGAATTCCTTGGTATCTGAACTTGTGAAGGTGACTACAACAGAACGTCTTGTGCTTGAACAATGCAAAGATTTTTTGTCAACGTTATCAGCCATGCAAGTCAAGGACTGTAGCTTGAGAACACATATAATACAACTAAAACGTCTACCATTACCCGCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

659

Amino Acids

70.72

Weight (kDa)

10.76

Isoelectric Point (pI)

61.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QWRF PF04484 303 - 625 6.8e-113 QWRF family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1222
AatII GACGTC 1 cut(s) 1220
Acc36I ACCTGC 2 cut(s) 115, 1023
AccB1I GGYRCC 1 cut(s) 262
AccB7I CCANNNNNTGG 1 cut(s) 1703
AccBSI CCGCTC 1 cut(s) 502
AccI GTMKAC 2 cut(s) 512, 1960
AccII CGCG 4 cut(s) 105, 117, 241, 990
AclI AACGTT 1 cut(s) 1898
AclWI GGATC 5 cut(s) 709, 763, 1046, 1059, 1550
AcoI YGGCCR 4 cut(s) 47, 294, 584, 978
AcsI RAATTY 6 cut(s) 268, 547, 607, 613, 634, 1819
AcuI CTGAAG 1 cut(s) 912
AcyI GRCGYC 3 cut(s) 263, 515, 1217
AfaI GTAC 5 cut(s) 140, 316, 330, 1312, 1684
AflIII ACRYGT 2 cut(s) 103, 141
AgeI ACCGGT 1 cut(s) 579
AgsI TTSAA 7 cut(s) 98, 168, 1129, 1260, 1573, 1727, 1874
AhdI GACNNNNNGTC 3 cut(s) 107, 386, 1526
AhlI ACTAGT 1 cut(s) 1073
AjnI CCWGG 1 cut(s) 1201
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 6 cut(s) 133, 199, 261, 370, 1016, 1155
AlwI GGATC 5 cut(s) 709, 763, 1046, 1059, 1550
AlwNI CAGNNNCTG 1 cut(s) 1757
ApaI GGGCCC 2 cut(s) 278, 289
ApeKI GCWGC 7 cut(s) 8, 89, 232, 473, 1304, 1754, 1973
ApoI RAATTY 6 cut(s) 268, 547, 607, 613, 634, 1819
AsiGI ACCGGT 1 cut(s) 579
AspLEI GCGC 2 cut(s) 265, 839
AspS9I GGNCC 8 cut(s) 274, 275, 285, 286, 319, 555, 589, 1283
AsuC2I CCSGG 7 cut(s) 205, 312, 322, 400, 592, 1056, 1345
AsuHPI GGTGA 6 cut(s) 532, 581, 1053, 1224, 1276, 1858
AsuII TTCGAA 2 cut(s) 611, 626
AvaII GGWCC 1 cut(s) 1283
BaeGI GKGCMC 2 cut(s) 278, 289
BamHI GGATCC 1 cut(s) 1051
BanI GGYRCC 1 cut(s) 262
BanII GRGCYC 4 cut(s) 278, 289, 1624, 1751
BbsI GAAGAC 5 cut(s) 201, 861, 1212, 1371, 1685
Bbv12I GWGCWC 1 cut(s) 339
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 5 cut(s) 101, 219, 460, 1291, 1766
BccI CCATC 2 cut(s) 36, 773
BceAI ACGGC 4 cut(s) 77, 333, 862, 906
BciT130I CCWGG 1 cut(s) 1203
BclI TGATCA 1 cut(s) 571
BcnI CCSGG 7 cut(s) 205, 312, 322, 400, 592, 1056, 1345
BcoDI GTCTC 6 cut(s) 133, 199, 261, 370, 1016, 1155
BcuI ACTAGT 1 cut(s) 1073
BfaI CTAG 8 cut(s) 552, 717, 1074, 1188, 1251, 1308, 1644, 1655
BfmI CTRYAG 4 cut(s) 189, 655, 1415, 1924
BfoI RGCGCY 2 cut(s) 266, 840
BfuAI ACCTGC 2 cut(s) 115, 1023
BglI GCCNNNNNGGC 2 cut(s) 293, 502
BlpI GCTNAGC 3 cut(s) 344, 840, 1750
Bme1390I CCNGG 8 cut(s) 205, 312, 322, 400, 592, 1056, 1203, 1345
Bme18I GGWCC 1 cut(s) 1283
BmeRI GACNNNNNGTC 3 cut(s) 107, 386, 1526
BmgT120I GGNCC 8 cut(s) 274, 275, 285, 286, 319, 555, 589, 1283
BmiI GGNNCC 6 cut(s) 264, 276, 287, 358, 404, 1053
BmrFI CCNGG 8 cut(s) 205, 312, 322, 400, 592, 1056, 1203, 1345
BmsI GCATC 6 cut(s) 209, 844, 1369, 1435, 1755, 1787
BpiI GAAGAC 5 cut(s) 201, 861, 1212, 1371, 1685
BplI GAGNNNNNCTC 4 cut(s) 419, 451, 823, 855
BpmI CTGGAG 1 cut(s) 17
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 3 cut(s) 344, 840, 1750
Bpu14I TTCGAA 2 cut(s) 611, 626
BpuEI CTTGAG 1 cut(s) 1951
BpuMI CCSGG 7 cut(s) 205, 312, 322, 400, 592, 1056, 1345
BsaHI GRCGYC 3 cut(s) 263, 515, 1217
BsaI GGTCTC 1 cut(s) 133
BsaJI CCNNGG 6 cut(s) 115, 456, 963, 1154, 1202, 1824
BsaWI WCCGGW 4 cut(s) 300, 331, 579, 917
BsaXI ACNNNNNCTCC 8 cut(s) 59, 89, 139, 169, 525, 555, 1374, 1404
Bse118I RCCGGY 5 cut(s) 339, 517, 579, 586, 1192
Bse1I ACTGG 2 cut(s) 1680, 1697
Bse3DI GCAATG 4 cut(s) 355, 823, 993, 1779
BseBI CCWGG 1 cut(s) 1203
BseDI CCNNGG 6 cut(s) 115, 456, 963, 1154, 1202, 1824
BseGI GGATG 1 cut(s) 1778
BseMI GCAATG 4 cut(s) 355, 823, 993, 1779
BseMII CTCAG 6 cut(s) 78, 335, 813, 854, 1524, 1764
BseNI ACTGG 2 cut(s) 1680, 1697
BseRI GAGGAG 7 cut(s) 67, 121, 187, 190, 374, 758, 1194
BseSI GKGCMC 2 cut(s) 278, 289
BseX3I CGGCCG 2 cut(s) 47, 294
BseXI GCAGC 5 cut(s) 101, 219, 460, 1291, 1766
BsgI GTGCAG 1 cut(s) 1481
Bsh1236I CGCG 4 cut(s) 105, 117, 241, 990
Bsh1285I CGRYCG 3 cut(s) 50, 297, 301
BshNI GGYRCC 1 cut(s) 262
BshTI ACCGGT 1 cut(s) 579
BsiEI CGRYCG 3 cut(s) 50, 297, 301
BsiHKAI GWGCWC 1 cut(s) 339
BsmAI GTCTC 6 cut(s) 133, 199, 261, 370, 1016, 1155
BsmBI CGTCTC 3 cut(s) 261, 1016, 1155
BsmI GAATGC 3 cut(s) 1252, 1477, 1498
Bso31I GGTCTC 1 cut(s) 133
Bsp119I TTCGAA 2 cut(s) 611, 626
Bsp120I GGGCCC 2 cut(s) 274, 285
Bsp1286I GDGCHC 5 cut(s) 278, 289, 339, 1624, 1751
Bsp143I GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
Bsp1720I GCTNAGC 3 cut(s) 344, 840, 1750
BspCNI CTCAG 6 cut(s) 77, 336, 814, 853, 1523, 1763
BspFNI CGCG 4 cut(s) 105, 117, 241, 990
BspLI GGNNCC 6 cut(s) 264, 276, 287, 358, 404, 1053
BspMAI CTGCAG 1 cut(s) 1419
BspMI ACCTGC 2 cut(s) 115, 1023
BspPI GGATC 5 cut(s) 709, 763, 1046, 1059, 1550
BspQI GCTCTTC 1 cut(s) 1629
BspT104I TTCGAA 2 cut(s) 611, 626
BspT107I GGYRCC 1 cut(s) 262
BspTNI GGTCTC 1 cut(s) 133
BsrBI CCGCTC 1 cut(s) 502
BsrDI GCAATG 4 cut(s) 355, 823, 993, 1779
BsrFI RCCGGY 5 cut(s) 339, 517, 579, 586, 1192
BsrI ACTGG 2 cut(s) 1680, 1697
BssAI RCCGGY 5 cut(s) 339, 517, 579, 586, 1192
BssECI CCNNGG 6 cut(s) 115, 456, 963, 1154, 1202, 1824
BssMI GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
BssNI GRCGYC 3 cut(s) 263, 515, 1217
BssT1I CCWWGG 3 cut(s) 456, 963, 1824
Bst2UI CCWGG 1 cut(s) 1203
Bst4CI ACNGT 7 cut(s) 193, 328, 656, 908, 1162, 1409, 1925
Bst6I CTCTTC 3 cut(s) 520, 668, 1629
BstACI GRCGYC 3 cut(s) 263, 515, 1217
BstBI TTCGAA 2 cut(s) 611, 626
BstC8I GCNNGC 8 cut(s) 122, 285, 588, 1116, 1194, 1677, 1770, 1793
BstDEI CTNAG 7 cut(s) 64, 344, 822, 840, 1325, 1510, 1750
BstDSI CCRYGG 1 cut(s) 115
BstF5I GGATG 1 cut(s) 1778
BstFNI CGCG 4 cut(s) 105, 117, 241, 990
BstH2I RGCGCY 2 cut(s) 266, 840
BstHHI GCGC 2 cut(s) 265, 839
BstKTI GATC 9 cut(s) 538, 574, 704, 758, 770, 886, 1054, 1545, 1639
BstMAI GTCTC 6 cut(s) 133, 199, 261, 370, 1016, 1155
BstMBI GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
BstMCI CGRYCG 3 cut(s) 50, 297, 301
BstNI CCWGG 1 cut(s) 1203
BstNSI RCATGY 2 cut(s) 145, 1390
BstSCI CCNGG 8 cut(s) 203, 310, 320, 398, 590, 1054, 1201, 1343
BstSFI CTRYAG 4 cut(s) 189, 655, 1415, 1924
BstSLI GKGCMC 2 cut(s) 278, 289
BstUI CGCG 4 cut(s) 105, 117, 241, 990
BstV1I GCAGC 5 cut(s) 101, 219, 460, 1291, 1766
BstV2I GAAGAC 5 cut(s) 201, 861, 1212, 1371, 1685
BstX2I RGATCY 2 cut(s) 701, 1051
BstXI CCANNNNNNTGG 1 cut(s) 952
BstYI RGATCY 2 cut(s) 701, 1051
BstZI CGGCCG 2 cut(s) 47, 294
BtgI CCRYGG 1 cut(s) 115
BtsCI GGATG 1 cut(s) 1778
BtsI GCAGTG 1 cut(s) 1424
BtsIMutI CAGTG 3 cut(s) 913, 1167, 1424
BveI ACCTGC 2 cut(s) 115, 1023
Cac8I GCNNGC 8 cut(s) 122, 285, 588, 1116, 1194, 1677, 1770, 1793
CaiI CAGNNNCTG 1 cut(s) 1757
CfoI GCGC 2 cut(s) 265, 839
Cfr10I RCCGGY 5 cut(s) 339, 517, 579, 586, 1192
Cfr13I GGNCC 8 cut(s) 274, 275, 285, 286, 319, 555, 589, 1283
Cfr42I CCGCGG 1 cut(s) 118
CseI GACGC 4 cut(s) 94, 111, 523, 1134
Csp6I GTAC 5 cut(s) 139, 315, 329, 1311, 1683
CspAI ACCGGT 1 cut(s) 579
CviAII CATG 5 cut(s) 142, 1387, 1456, 1497, 1909
CviQI GTAC 5 cut(s) 139, 315, 329, 1311, 1683
DdeI CTNAG 7 cut(s) 64, 344, 822, 840, 1325, 1510, 1750
DinI GGCGCC 1 cut(s) 264
DpnI GATC 9 cut(s) 537, 573, 703, 757, 769, 885, 1053, 1544, 1638
DpnII GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
DrdI GACNNNNNNGTC 1 cut(s) 1222
DriI GACNNNNNGTC 3 cut(s) 107, 386, 1526
DseDI GACNNNNNNGTC 1 cut(s) 1222
EaeI YGGCCR 4 cut(s) 47, 294, 584, 978
EagI CGGCCG 2 cut(s) 47, 294
Eam1104I CTCTTC 3 cut(s) 520, 668, 1629
Eam1105I GACNNNNNGTC 3 cut(s) 107, 386, 1526
EarI CTCTTC 3 cut(s) 520, 668, 1629
EciI GGCGGA 3 cut(s) 70, 358, 520
EclXI CGGCCG 2 cut(s) 47, 294
Eco130I CCWWGG 3 cut(s) 456, 963, 1824
Eco24I GRGCYC 4 cut(s) 278, 289, 1624, 1751
Eco31I GGTCTC 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 1283
Eco52I CGGCCG 2 cut(s) 47, 294
Eco57I CTGAAG 1 cut(s) 912
EcoO109I RGGNCCY 1 cut(s) 555
EcoRI GAATTC 5 cut(s) 268, 547, 607, 613, 1819
EcoRII CCWGG 1 cut(s) 1201
EcoT14I CCWWGG 3 cut(s) 456, 963, 1824
EcoT22I ATGCAT 1 cut(s) 1498
EcoT38I GRGCYC 4 cut(s) 278, 289, 1624, 1751
EgeI GGCGCC 1 cut(s) 264
EheI GGCGCC 1 cut(s) 264
ErhI CCWWGG 3 cut(s) 456, 963, 1824
Esp3I CGTCTC 3 cut(s) 261, 1016, 1155
FaeI CATG 5 cut(s) 145, 1390, 1459, 1500, 1912
FalI AAGNNNNNCTT 4 cut(s) 208, 240, 757, 789
FatI CATG 5 cut(s) 141, 1386, 1455, 1496, 1908
FauI CCCGC 4 cut(s) 276, 346, 1093, 1978
FbaI TGATCA 1 cut(s) 571
FblI GTMKAC 2 cut(s) 512, 1960
FokI GGATG 1 cut(s) 1765
FriOI GRGCYC 4 cut(s) 278, 289, 1624, 1751
FseI GGCCGGCC 1 cut(s) 590
FspBI CTAG 8 cut(s) 552, 717, 1074, 1188, 1251, 1308, 1644, 1655
GlaI GCGC 2 cut(s) 264, 838
GsuI CTGGAG 1 cut(s) 17
HaeII RGCGCY 2 cut(s) 266, 840
HgaI GACGC 4 cut(s) 94, 111, 523, 1134
HhaI GCGC 2 cut(s) 265, 839
Hin1I GRCGYC 3 cut(s) 263, 515, 1217
Hin1II CATG 5 cut(s) 145, 1390, 1459, 1500, 1912
Hin6I GCGC 2 cut(s) 263, 837
HinP1I GCGC 2 cut(s) 263, 837
HincII GTYRAC 3 cut(s) 513, 1720, 1896
HindII GTYRAC 3 cut(s) 513, 1720, 1896
HindIII AAGCTT 1 cut(s) 1668
HinfI GANTC 6 cut(s) 381, 595, 866, 941, 1138, 1739
HphI GGTGA 6 cut(s) 532, 581, 1053, 1224, 1276, 1858
Hpy166II GTNNAC 7 cut(s) 147, 513, 1061, 1215, 1720, 1896, 1961
Hpy188I TCNGA 9 cut(s) 19, 67, 361, 444, 883, 898, 1155, 1513, 1834
Hpy188III TCNNGA 6 cut(s) 34, 213, 765, 938, 1086, 1628
Hpy8I GTNNAC 7 cut(s) 147, 513, 1061, 1215, 1720, 1896, 1961
Hpy99I CGWCG 4 cut(s) 105, 110, 517, 1150
HpyCH4III ACNGT 7 cut(s) 193, 328, 656, 908, 1162, 1409, 1925
HpyCH4IV ACGT 4 cut(s) 1217, 1861, 1898, 1957
HpyF3I CTNAG 7 cut(s) 64, 344, 822, 840, 1325, 1510, 1750
HpySE526I ACGT 4 cut(s) 1217, 1861, 1898, 1957
Hsp92I GRCGYC 3 cut(s) 263, 515, 1217
Hsp92II CATG 5 cut(s) 145, 1390, 1459, 1500, 1912
HspAI GCGC 2 cut(s) 263, 837
KasI GGCGCC 1 cut(s) 262
KroI GCCGGC 2 cut(s) 586, 1192
KroNI GCCGGC 2 cut(s) 588, 1194
Ksp22I TGATCA 1 cut(s) 571
KspI CCGCGG 1 cut(s) 118
Kzo9I GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
LguI GCTCTTC 1 cut(s) 1629
LmnI GCTCC 7 cut(s) 334, 402, 481, 499, 1181, 1395, 1658
Lsp1109I GCAGC 5 cut(s) 101, 219, 460, 1291, 1766
LweI GCATC 6 cut(s) 209, 844, 1369, 1435, 1755, 1787
MaeI CTAG 8 cut(s) 552, 717, 1074, 1188, 1251, 1308, 1644, 1655
MaeII ACGT 4 cut(s) 1217, 1861, 1898, 1957
MaeIII GTNAC 6 cut(s) 388, 1230, 1501, 1528, 1548, 1846
MalI GATC 9 cut(s) 537, 573, 703, 757, 769, 885, 1053, 1544, 1638
MbiI CCGCTC 1 cut(s) 502
MboI GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
MflI RGATCY 2 cut(s) 701, 1051
MhlI GDGCHC 5 cut(s) 278, 289, 339, 1624, 1751
MluCI AATT 7 cut(s) 268, 547, 607, 613, 634, 1599, 1819
MluI ACGCGT 1 cut(s) 103
Mly113I GGCGCC 1 cut(s) 263
MlyI GAGTC 4 cut(s) 375, 604, 875, 935
MmeI TCCRAC 4 cut(s) 42, 679, 969, 1684
Mph1103I ATGCAT 1 cut(s) 1498
MroNI GCCGGC 2 cut(s) 586, 1192
MseI TTAA 1 cut(s) 1536
MslI CAYNNNNRTG 1 cut(s) 998
MspA1I CMGCKG 3 cut(s) 117, 232, 1757
MspR9I CCNGG 8 cut(s) 205, 312, 322, 400, 592, 1056, 1203, 1345
Mva1269I GAATGC 3 cut(s) 1252, 1477, 1498
MvaI CCWGG 1 cut(s) 1203
MvnI CGCG 4 cut(s) 105, 117, 241, 990
NaeI GCCGGC 2 cut(s) 588, 1194
NarI GGCGCC 1 cut(s) 263
NciI CCSGG 7 cut(s) 205, 312, 322, 400, 592, 1056, 1345
NdeII GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
NgoMIV GCCGGC 2 cut(s) 586, 1192
NlaIII CATG 5 cut(s) 145, 1390, 1459, 1500, 1912
NlaIV GGNNCC 6 cut(s) 264, 276, 287, 358, 404, 1053
NmeAIII GCCGAG 1 cut(s) 25
NmuCI GTSAC 4 cut(s) 388, 1230, 1528, 1846
NsiI ATGCAT 1 cut(s) 1498
NspI RCATGY 2 cut(s) 145, 1390
NspV TTCGAA 2 cut(s) 611, 626
PciI ACATGT 1 cut(s) 141
PciSI GCTCTTC 1 cut(s) 1629
PcsI WCGNNNNNNNCGW 1 cut(s) 623
PctI GAATGC 3 cut(s) 1252, 1477, 1498
PdiI GCCGGC 2 cut(s) 588, 1194
PfeI GAWTC 2 cut(s) 1138, 1739
PflMI CCANNNNNTGG 1 cut(s) 1703
PinAI ACCGGT 1 cut(s) 579
PleI GAGTC 4 cut(s) 375, 603, 874, 935
PluTI GGCGCC 1 cut(s) 266
PpsI GAGTC 4 cut(s) 375, 603, 874, 935
PscI ACATGT 1 cut(s) 141
Psp1406I AACGTT 1 cut(s) 1898
Psp6I CCWGG 1 cut(s) 1201
PspGI CCWGG 1 cut(s) 1201
PspN4I GGNNCC 6 cut(s) 264, 276, 287, 358, 404, 1053
PspOMI GGGCCC 2 cut(s) 274, 285
PspPI GGNCC 8 cut(s) 274, 275, 285, 286, 319, 555, 589, 1283
PstI CTGCAG 1 cut(s) 1419
PstNI CAGNNNCTG 1 cut(s) 1757
PsuI RGATCY 2 cut(s) 701, 1051
PvuII CAGCTG 1 cut(s) 1757
RigI GGCCGGCC 1 cut(s) 590
RsaI GTAC 5 cut(s) 140, 316, 330, 1312, 1684
RsaNI GTAC 5 cut(s) 139, 315, 329, 1311, 1683
RseI CAYNNNNRTG 1 cut(s) 998
SacII CCGCGG 1 cut(s) 118
SalI GTCGAC 1 cut(s) 511
SapI GCTCTTC 1 cut(s) 1629
SaqAI TTAA 1 cut(s) 1536
Sau3AI GATC 9 cut(s) 535, 571, 701, 755, 767, 883, 1051, 1542, 1636
Sau96I GGNCC 8 cut(s) 274, 275, 285, 286, 319, 555, 589, 1283
SchI GAGTC 4 cut(s) 375, 604, 875, 935
ScrFI CCNGG 8 cut(s) 205, 312, 322, 400, 592, 1056, 1203, 1345
SduI GDGCHC 5 cut(s) 278, 289, 339, 1624, 1751
SfaNI GCATC 6 cut(s) 209, 844, 1369, 1435, 1755, 1787
SfcI CTRYAG 4 cut(s) 189, 655, 1415, 1924
SfiI GGCCNNNNNGGCC 1 cut(s) 293
SfoI GGCGCC 1 cut(s) 264
Sfr303I CCGCGG 1 cut(s) 118
SfuI TTCGAA 2 cut(s) 611, 626
SgrAI CRCCGGYG 2 cut(s) 517, 579
SgrBI CCGCGG 1 cut(s) 118
SinI GGWCC 1 cut(s) 1283
SmiMI CAYNNNNRTG 1 cut(s) 998
SmlI CTYRAG 1 cut(s) 1930
SmoI CTYRAG 1 cut(s) 1930
SpeI ACTAGT 1 cut(s) 1073
Sse9I AATT 7 cut(s) 268, 547, 607, 613, 634, 1599, 1819
SspDI GGCGCC 1 cut(s) 262
SspMI CTAG 8 cut(s) 552, 717, 1074, 1188, 1251, 1308, 1644, 1655
StyD4I CCNGG 8 cut(s) 203, 310, 320, 398, 590, 1054, 1201, 1343
StyI CCWWGG 3 cut(s) 456, 963, 1824
TaaI ACNGT 7 cut(s) 193, 328, 656, 908, 1162, 1409, 1925
TaiI ACGT 4 cut(s) 1220, 1864, 1901, 1960
TaqI TCGA 8 cut(s) 173, 512, 611, 626, 758, 1085, 1238, 1784
TasI AATT 7 cut(s) 268, 547, 607, 613, 634, 1599, 1819
TatI WGTACW 1 cut(s) 138
TfiI GAWTC 2 cut(s) 1138, 1739
Tru1I TTAA 1 cut(s) 1536
Tru9I TTAA 1 cut(s) 1536
TscAI CASTG 3 cut(s) 913, 1167, 1424
TseFI GTSAC 4 cut(s) 388, 1230, 1528, 1846
TseI GCWGC 7 cut(s) 8, 89, 232, 473, 1304, 1754, 1973
Tsp45I GTSAC 4 cut(s) 388, 1230, 1528, 1846
TspDTI ATGAA 4 cut(s) 263, 1680, 1788, 1832
TspRI CASTG 3 cut(s) 913, 1167, 1424
Van91I CCANNNNNTGG 1 cut(s) 1703
VpaK11BI GGWCC 1 cut(s) 1283
XapI RAATTY 6 cut(s) 268, 547, 607, 613, 634, 1819
XceI RCATGY 2 cut(s) 145, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1209
XmiI GTMKAC 2 cut(s) 512, 1960
XspI CTAG 8 cut(s) 552, 717, 1074, 1188, 1251, 1308, 1644, 1655
ZraI GACGTC 1 cut(s) 1218
Zsp2I ATGCAT 1 cut(s) 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.