Rmu_sc0000279.1_g000028

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000279.1
OG0000030
Physical Location & Seq
Reverse (-)
110867 .. 114716
3850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000279.1_g000028.1.cds

Sequence Viewer

Length: 1701 bp
atgagatctccgaccacctctttagggacctccggtgaggttttcagagaaatccggtgggagacggccggtcattctgtcttgcttccgttaaatgaagccgttaaacagctgatgtggcatgccaactcagctttggtgaagcccacatggaagtgcaggctgtgcccgacacgttcgttaacggaagggcagaagggtgattccaggtttcaaaaacgacaagctttctgtggtggtaaaaaaggttttactgcagctcatacctctgaggtggcaatggcaagattgtcatttgaccgattgtggcaaaattctattgagcaactagaagggaaccgcaaaatggaagatgtagcgaagctgaagaacataatttatagggaagaaaatcaggtcagcgagagtgccgttgaagtggccagtctgacaactgatgatgattgcaagacattgtccggtgttaatgacaaatcagacctcgaggttaaaatcaaaacagcgtgtcgaggaaaacacttcagaagaactatgtcttccctgtcagatgaaaaggtagctacgacatatgaaattgggtttggttcattgtaccgatttcgttgtggcaaagtgaacctcccactgtgccaaatgagggttgaaaattttgatgttgggaactcatgcatcaagatacacgaaaggaacctgacaatcacacatgaagactttcggcgcattatgggcgtcatggatggagggtgcgatgtgaatctcaaaggaagcaccgaggaccctgatatactggggctgaagagcaagctttcaaggaaggagaaggagataaccatacatggtctgaggaggttattgattgaatctgaaagtaccgacgacacttttaaggtcagctttgctttatatgcccttgcaactctgttaatcccagttatgggaatcgaagccacgcagattggtttggcaggaggttgtattctgttccttcaattgttctacctggacgttgttggcaacggtatttgtatatacccaaagattgggaaaccagtgatgacgtggagtagagatgacctgaagagagtttatgaaaaagtggagagtgagggaggatttaaaagcgagaatgtgcgtgtaacgaagaagtattttaggggaaatgtactttcagggactagatcagttgatcccagtacagggattaagacaactgtagtagacgatttatcagaagtgaggtctgatgttggtgttgtgaaaggggatatagagagtttgaagttaacggttggtcggttggagccagacatgggtcgattgaggagagcaattctgacactagaatccacggttggggaacttaaggccaacggtctcggcggcattgttgctgaagcaatcaagcaagtgtttgaagacaagtcctacacttacggtggtaattttgggaacgatggtctttttatcaatgaagagcaccaaggcacagaagctgagcaacatgacaatgagatgcctcataacaaatctatcattgtcatgtccactgacaaggatgcatatggatgcgacagcagtgacatggaagaagatgaggcagggagtttcccggcggtgtctgagatattgcacagtgactcatacctactgacctatctattcagcaagaagattaccgccgatgacagtgttgggaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

566

Amino Acids

62.88

Weight (kDa)

5.99

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09630 FvH4_1g25481 FvH4_2g06390 FvH4_2g09470 FvH4_2g11952 FvH4_2g25151 FvH4_2g27901 FvH4_3g22392 FvH4_3g23130 FvH4_3g26751 FvH4_3g37244 FvH4_3g37260 FvH4_4g03329 FvH4_4g03350 FvH4_4g07720 FvH4_4g07721 FvH4_4g09520 FvH4_4g14081 FvH4_4g14090 FvH4_4g16060 FvH4_4g16061 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_4g21890 FvH4_5g19752 FvH4_5g19752 FvH4_5g19752 FvH4_5g33480 FvH4_6g25711 FvH4_6g25720 FvH4_6g40321 FvH4_6g40680 FvH4_6g40680 FvH4_7g05770 FvH4_7g05770 FvH4_7g06960 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g07131 FvH4_7g08580 FvH4_7g10221 FvH4_7g12251 FvH4_7g12251 FvH4_7g12251 FvH4_c19g00020
prunus_persica Prupe.3G127800_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.3G127900_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261000_v2.0.a1 Prupe.4G261400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0313581 RchiOBHm_Chr1g0347831 RchiOBHm_Chr1g0372251 RchiOBHm_Chr2g0120671 RchiOBHm_Chr2g0120681 RchiOBHm_Chr2g0155601 RchiOBHm_Chr2g0161371 RchiOBHm_Chr2g0171911 RchiOBHm_Chr3g0451001 RchiOBHm_Chr3g0478081 RchiOBHm_Chr3g0485951 RchiOBHm_Chr4g0396211 RchiOBHm_Chr4g0396221 RchiOBHm_Chr4g0413121 RchiOBHm_Chr4g0417291 RchiOBHm_Chr4g0423011 RchiOBHm_Chr4g0424781 RchiOBHm_Chr4g0427951 RchiOBHm_Chr4g0432021 RchiOBHm_Chr5g0012051 RchiOBHm_Chr6g0268131 RchiOBHm_Chr6g0268141 RchiOBHm_Chr6g0281911 RchiOBHm_Chr6g0285311 RchiOBHm_Chr7g0189591 RchiOBHm_Chr7g0189601 RchiOBHm_Chr7g0224131
rosa_laevigata RLG00000000963 RLG00000000967 RLG00000001615 RLG00000002043 RLG00000002094 RLG00000002112 RLG00000002404 RLG00000004455 RLG00000005527 RLG00000005655 RLG00000006174 RLG00000007767 RLG00000008355 RLG00000008585 RLG00000008588 RLG00000008683 RLG00000008813 RLG00000009112 RLG00000009252 RLG00000009280 RLG00000009413 RLG00000012815 RLG00000012845 RLG00000013323 RLG00000013324 RLG00000015631 RLG00000017303 RLG00000018309 RLG00000018310 RLG00000018442 RLG00000018443 RLG00000018702 RLG00000019612 RLG00000021285 RLG00000021286 RLG00000022541 RLG00000023201 RLG00000023427 RLG00000029113 RLG00000029669 RLG00000030439 RLG00000030440 RLG00000033139 RLG00000034155 RLG00000034156 RLG00000034157 RLG00000034189 RLG00000034333 RLG00000034334 RLG00000034402 RLG00000034483
rosa_multiflora Rmu_co8408521.1_g000001 Rmu_co8451191.1_g000001 Rmu_co8509671.1_g000001 Rmu_co8512787.1_g000002 Rmu_sc0000077.1_g000042 Rmu_sc0000279.1_g000028 Rmu_sc0000280.1_g000005 Rmu_sc0000280.1_g000013 Rmu_sc0000319.1_g000017 Rmu_sc0000319.1_g000018 Rmu_sc0000361.1_g000007 Rmu_sc0000381.1_g000022 Rmu_sc0000642.1_g000014 Rmu_sc0000931.1_g000013 Rmu_sc0000982.1_g000033 Rmu_sc0001554.1_g000014 Rmu_sc0001992.1_g000027 Rmu_sc0002045.1_g000030 Rmu_sc0002106.1_g000002 Rmu_sc0003179.1_g000034 Rmu_sc0003422.1_g000009 Rmu_sc0004125.1_g000004 Rmu_sc0004999.1_g000015 Rmu_sc0005394.1_g000005 Rmu_sc0005712.1_g000015 Rmu_sc0006373.1_g000010 Rmu_sc0006872.1_g000002 Rmu_sc0006872.1_g000004 Rmu_sc0007367.1_g000011 Rmu_sc0007367.1_g000012 Rmu_sc0007491.1_g000005 Rmu_sc0007705.1_g000008 Rmu_sc0007705.1_g000009 Rmu_sc0007877.1_g000016 Rmu_sc0012512.1_g000006 Rmu_sc0021854.1_g000001 Rmu_sc0028193.1_g000003 Rmu_sc0032675.1_g000001 Rmu_ssc0000158.1_g000019 Rmu_ssc0000387.1_g000020
rosa_roxburghii Rroxscaffold_1G00009730 Rroxscaffold_1G00017900 Rroxscaffold_1G00031860 Rroxscaffold_1G00036000 Rroxscaffold_1G00036390 Rroxscaffold_1G00069020 Rroxscaffold_1G00071750 Rroxscaffold_2G00080160 Rroxscaffold_2G00080340 Rroxscaffold_2G00080790 Rroxscaffold_2G00085870 Rroxscaffold_2G00109300 Rroxscaffold_2G00113740 Rroxscaffold_2G00113750 Rroxscaffold_2G00113760 Rroxscaffold_2G00116400 Rroxscaffold_2G00116870 Rroxscaffold_2G00116880 Rroxscaffold_2G00118190 Rroxscaffold_2G00118200 Rroxscaffold_2G00118650 Rroxscaffold_2G00129110 Rroxscaffold_2G00134740 Rroxscaffold_2G00140920 Rroxscaffold_4G00285970 Rroxscaffold_4G00312160 Rroxscaffold_4G00322340 Rroxscaffold_5G00349950 Rroxscaffold_6G00430610 Rroxscaffold_7G00162630 Rroxscaffold_7G00162640 Rroxscaffold_7G00164320 Rroxscaffold_7G00214930
rosa_rugosa Rorug01G0012500 Rorug01G0018000 Rorug01G0019000 Rorug01G0019000 Rorug01G0070900 Rorug01G0094400 Rorug02G0043200 Rorug03G0329700 Rorug03G0329800 Rorug03G0329900 Rorug03G0332900 Rorug03G0343500 Rorug03G0343600 Rorug03G0343700 Rorug04G0032000 Rorug04G0065800 Rorug05G0102700 Rorug05G0106200 Rorug05G0256700 Rorug05G0256700 Rorug05G0439000 Rorug05G0540900 Rorug06G0055100 Rorug06G0060400 Rorug06G0170800 Rorug06G0184400 Rorug06G0439700 Rorug07G0182300 Rorug07G0182400 Rorug07G0182500 Rorug07G0208100 Rorug07G0208200 Rorug07G0208200 Rorug07G0283700.1 Rorug07G0283800
rosa_samantha Rh1AG090000 Rh1AG169000 Rh1BG060800 Rh1BG060900 Rh1BG070000 Rh1BG407100 Rh1BG407200 Rh1BG407400 Rh1BG407500 Rh1CG028100 Rh1CG028200 Rh1CG040100 Rh1CG050100 Rh1CG055500 Rh1CG156800 Rh1CG421400 Rh1CG421500 Rh1CG421600 Rh1DG029300 Rh1DG054600 Rh1DG054700 Rh1DG059400 Rh1DG177400 Rh1DG438200 Rh1DG438300 Rh1DG438500 Rh1DG438600 Rh1DG438700 Rh2AG286700 Rh2AG286800 Rh2AG286900 Rh2AG311900 Rh2AG322600 Rh2AG353300 Rh2AG353400 Rh2AG560900 Rh2AG642800 Rh2AG642900 Rh2AG643000 Rh2AG643100 Rh2AG647000 Rh2BG288800 Rh2BG317900 Rh2BG394800 Rh2BG394900 Rh2BG594000 Rh2BG657700 Rh2CG299000 Rh2CG299100 Rh2CG300200 Rh2DG102500 Rh2DG284000 Rh2DG312200 Rh2DG312300 Rh2DG336300 Rh2DG336400 Rh2DG337200 Rh2DG571300 Rh3AG246800 Rh3AG272200 Rh3BG121800 Rh3BG249400 Rh3BG265300 Rh3BG341500 Rh3BG348700 Rh3CG301300 Rh3CG307800 Rh3CG307900 Rh3CG308100 Rh3DG144400 Rh3DG251600 Rh3DG297700 Rh3DG301700 Rh3DG305100 Rh3DG340900 Rh4AG149000 Rh4AG248900 Rh4AG336100 Rh4BG044000 Rh4BG111400 Rh4BG133400 Rh4BG182300 Rh4BG219600 Rh4BG219700 Rh4BG254300 Rh4BG388300 Rh4BG388600 Rh4CG126200 Rh4CG155800 Rh4CG257000 Rh4CG402900 Rh4CG403000 Rh4DG005400 Rh4DG057400 Rh4DG057500 Rh4DG057700 Rh4DG120700 Rh4DG280800 Rh4DG338600 Rh5AG057600 Rh5AG057700 Rh5AG057800 Rh5AG284700 Rh5AG284800 Rh5AG305600 Rh5AG364300 Rh5AG365100 Rh5AG365200 Rh5AG516000 Rh5AG516200 Rh5BG157600 Rh5BG235200 Rh5BG235400 Rh5BG308900 Rh5BG373800 Rh5BG414500 Rh5BG538800 Rh5CG102300 Rh5CG248400 Rh5CG249300 Rh5CG249400 Rh5CG326300 Rh5CG326400 Rh5CG366400 Rh5CG366500 Rh5CG439100 Rh5CG439200 Rh5CG497700 Rh5CG562500 Rh5CG567300 Rh5DG179600 Rh5DG179700 Rh5DG239900 Rh5DG299700 Rh5DG319400 Rh5DG319500 Rh6AG173400 Rh6AG175300 Rh6AG314800 Rh6AG405000 Rh6BG067300 Rh6BG067400 Rh6BG075300 Rh6BG101700 Rh6BG134300 Rh6BG324500 Rh6CG087200 Rh6CG132400 Rh6CG151800 Rh6CG151900 Rh6CG200100 Rh6CG205500 Rh6CG419400 Rh6CG419500 Rh6DG081400 Rh6DG119900 Rh6DG120000 Rh6DG191500 Rh6DG199900 Rh6DG251900 Rh6DG252000 Rh6DG498400 Rh7AG274800 Rh7AG283100 Rh7AG352600 Rh7AG364900 Rh7AG386800 Rh7BG321800 Rh7BG341100 Rh7CG294000 Rh7CG368900 Rh7CG369900 Rh7CG383700 Rh7CG406000 Rh7CG406100 Rh7DG106300 Rh7DG106400 Rh7DG286300 Rh7DG346900 Rh7DG353400 Rh7DG360000 Rh7DG361700 Rh7DG362200 Rh7DG362600 Rh7DG362900 Rh7DG363400
rosa_wichuraiana Rw0G000990 Rw0G001740 Rw0G002300 Rw0G002310 Rw0G007890 Rw0G007900 Rw0G023450 Rw0G023460 Rw1G000300 Rw1G007140 Rw1G007170 Rw1G008970 Rw1G010460 Rw1G039090 Rw1G039100 Rw2G012530 Rw2G016610 Rw2G023010 Rw2G031730 Rw3G014310 Rw4G008550 Rw4G010240 Rw4G012160 Rw4G024150 Rw5G009090 Rw5G047250 Rw5G048500 Rw5G050510 Rw6G006430 Rw6G006440 Rw6G006450 Rw6G013330 Rw6G016560 Rw6G021330 Rw6G024630 Rw6G035440 Rw6G041540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 482
AccB7I CCANNNNNTGG 1 cut(s) 1040
AccI GTMKAC 1 cut(s) 1218
AciI CCGC 4 cut(s) 340, 1380, 1613, 1677
AclWI GGATC 1 cut(s) 1181
AcoI YGGCCR 2 cut(s) 66, 420
AcsI RAATTY 2 cut(s) 313, 646
AcuI CTGAAG 5 cut(s) 386, 505, 815, 1097, 1413
AcyI GRCGYC 1 cut(s) 729
AfaI GTAC 4 cut(s) 593, 871, 1164, 1195
AflII CTTAAG 1 cut(s) 1361
AflIII ACRYGT 1 cut(s) 173
AgsI TTSAA 8 cut(s) 215, 416, 644, 810, 860, 989, 1279, 1415
AhdI GACNNNNNGTC 1 cut(s) 69
AjiI CACGTC 1 cut(s) 1059
AjnI CCWGG 2 cut(s) 206, 999
AjuI GAANNNNNNNTTGG 4 cut(s) 564, 596, 1335, 1367
AluBI AGCT 9 cut(s) 112, 134, 227, 260, 364, 560, 805, 894, 1493
AluI AGCT 9 cut(s) 112, 134, 227, 260, 364, 560, 805, 894, 1493
Alw21I GWGCWC 1 cut(s) 1479
Alw26I GTCTC 2 cut(s) 56, 1379
AlwI GGATC 1 cut(s) 1181
AlwNI CAGNNNCTG 1 cut(s) 1493
Ama87I CYCGRG 1 cut(s) 482
AoxI GGCC 3 cut(s) 66, 420, 1365
ApeKI GCWGC 1 cut(s) 257
ApoI RAATTY 2 cut(s) 313, 646
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 1 cut(s) 720
AspS9I GGNCC 2 cut(s) 27, 775
AsuC2I CCSGG 1 cut(s) 1610
AsuHPI GGTGA 3 cut(s) 47, 151, 212
AvaI CYCGRG 1 cut(s) 482
AvaII GGWCC 2 cut(s) 27, 775
BaeGI GKGCMC 1 cut(s) 170
BalI TGGCCA 1 cut(s) 422
BbsI GAAGAC 3 cut(s) 528, 714, 1422
Bbv12I GWGCWC 1 cut(s) 1479
BbvI GCAGC 1 cut(s) 269
BccI CCATC 2 cut(s) 731, 1448
BceAI ACGGC 3 cut(s) 81, 86, 395
BciT130I CCWGG 2 cut(s) 208, 1001
BcnI CCSGG 1 cut(s) 1610
BcoDI GTCTC 2 cut(s) 56, 1379
BfaI CTAG 3 cut(s) 329, 1176, 1340
BfmI CTRYAG 2 cut(s) 255, 1212
BfrI CTTAAG 1 cut(s) 1361
BglII AGATCT 1 cut(s) 5
BisI GCNGC 2 cut(s) 258, 1381
BlpI GCTNAGC 1 cut(s) 1494
BlsI GCNGC 2 cut(s) 259, 1382
Bme1390I CCNGG 3 cut(s) 208, 1001, 1610
Bme18I GGWCC 2 cut(s) 27, 775
BmeRI GACNNNNNGTC 1 cut(s) 69
BmeT110I CYCGRG 1 cut(s) 482
BmgBI CACGTC 1 cut(s) 1059
BmgT120I GGNCC 2 cut(s) 27, 775
BmiI GGNNCC 5 cut(s) 28, 338, 689, 777, 1302
BmrFI CCNGG 3 cut(s) 208, 1001, 1610
BmrI ACTGGG 3 cut(s) 797, 923, 1185
BmsI GCATC 4 cut(s) 678, 1503, 1546, 1556
BmuI ACTGGG 3 cut(s) 797, 923, 1185
BoxI GACNNNNGTC 1 cut(s) 1311
BpiI GAAGAC 3 cut(s) 528, 714, 1422
Bpu1102I GCTNAGC 1 cut(s) 1494
BpuMI CCSGG 1 cut(s) 1610
BsaBI GATNNNNATC 1 cut(s) 753
BsaHI GRCGYC 1 cut(s) 729
BsaI GGTCTC 1 cut(s) 1379
BsaJI CCNNGG 3 cut(s) 771, 1347, 1480
BsaWI WCCGGW 3 cut(s) 32, 54, 458
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 5 cut(s) 423, 792, 929, 1049, 1191
Bse3DI GCAATG 1 cut(s) 285
Bse8I GATNNNNATC 1 cut(s) 753
BseBI CCWGG 2 cut(s) 208, 1001
BseDI CCNNGG 3 cut(s) 771, 1347, 1480
BseGI GGATG 3 cut(s) 742, 1561, 1571
BseJI GATNNNNATC 1 cut(s) 753
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 5 cut(s) 144, 261, 833, 1485, 1611
BseNI ACTGG 5 cut(s) 423, 792, 929, 1049, 1191
BseRI GAGGAG 2 cut(s) 859, 1336
BseSI GKGCMC 1 cut(s) 170
BseX3I CGGCCG 1 cut(s) 66
BseXI GCAGC 1 cut(s) 269
BsgI GTGCAG 1 cut(s) 178
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 68, 422, 1367
BsiEI CGRYCG 1 cut(s) 69
BsiHKAI GWGCWC 1 cut(s) 1479
BsiHKCI CYCGRG 1 cut(s) 482
BsiSI CCGG 5 cut(s) 33, 55, 69, 459, 1610
BslFI GGGAC 2 cut(s) 40, 1186
BsmAI GTCTC 2 cut(s) 56, 1379
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 2 cut(s) 40, 1186
BsnI GGCC 3 cut(s) 68, 422, 1367
Bso31I GGTCTC 1 cut(s) 1379
BsoBI CYCGRG 1 cut(s) 482
Bsp1286I GDGCHC 2 cut(s) 170, 1479
Bsp143I GATC 3 cut(s) 5, 1178, 1186
Bsp1720I GCTNAGC 1 cut(s) 1494
BspACI CCGC 4 cut(s) 340, 1380, 1613, 1677
BspANI GGCC 3 cut(s) 68, 422, 1367
BspCNI CTCAG 5 cut(s) 143, 262, 834, 1486, 1612
BspLI GGNNCC 5 cut(s) 28, 338, 689, 777, 1302
BspMAI CTGCAG 1 cut(s) 259
BspPI GGATC 1 cut(s) 1181
BspQI GCTCTTC 2 cut(s) 791, 1467
BspTI CTTAAG 1 cut(s) 1361
BspTNI GGTCTC 1 cut(s) 1379
BsrDI GCAATG 1 cut(s) 285
BsrFI RCCGGY 1 cut(s) 68
BsrI ACTGG 5 cut(s) 423, 792, 929, 1049, 1191
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 3 cut(s) 771, 1347, 1480
BssMI GATC 3 cut(s) 5, 1178, 1186
BssNI GRCGYC 1 cut(s) 729
BssT1I CCWWGG 1 cut(s) 1480
Bst2UI CCWGG 2 cut(s) 208, 1001
Bst4CI ACNGT 9 cut(s) 627, 1019, 1213, 1288, 1351, 1373, 1436, 1634, 1688
Bst6I CTCTTC 3 cut(s) 791, 1073, 1467
BstACI GRCGYC 1 cut(s) 729
BstAFI CTTAAG 1 cut(s) 1361
BstAPI GCANNNNNTGC 1 cut(s) 165
BstC8I GCNNGC 3 cut(s) 123, 161, 803
BstDEI CTNAG 5 cut(s) 130, 270, 842, 1494, 1620
BstDSI CCRYGG 1 cut(s) 1347
BstF5I GGATG 3 cut(s) 742, 1561, 1571
BstHHI GCGC 1 cut(s) 720
BstKTI GATC 3 cut(s) 8, 1181, 1189
BstMAI GTCTC 2 cut(s) 56, 1379
BstMBI GATC 3 cut(s) 5, 1178, 1186
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 5 cut(s) 118, 131, 165, 726, 905
BstNI CCWGG 2 cut(s) 208, 1001
BstNSI RCATGY 1 cut(s) 125
BstPAI GACNNNNGTC 1 cut(s) 1311
BstSCI CCNGG 3 cut(s) 206, 999, 1608
BstSFI CTRYAG 2 cut(s) 255, 1212
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 1 cut(s) 269
BstV2I GAAGAC 3 cut(s) 528, 714, 1422
BstX2I RGATCY 1 cut(s) 5
BstYI RGATCY 1 cut(s) 5
BstZI CGGCCG 1 cut(s) 66
BsuRI GGCC 3 cut(s) 68, 422, 1367
BtgI CCRYGG 1 cut(s) 1347
BtgZI GCGATG 1 cut(s) 762
BtrI CACGTC 1 cut(s) 1059
BtsCI GGATG 3 cut(s) 742, 1561, 1571
BtsI GCAGTG 1 cut(s) 1582
BtsIMutI CAGTG 6 cut(s) 623, 1056, 1545, 1582, 1639, 1693
Cac8I GCNNGC 3 cut(s) 123, 161, 803
CaiI CAGNNNCTG 1 cut(s) 1493
CfoI GCGC 1 cut(s) 720
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 2 cut(s) 27, 775
CseI GACGC 1 cut(s) 718
Csp6I GTAC 4 cut(s) 592, 870, 1163, 1194
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviQI GTAC 4 cut(s) 592, 870, 1163, 1194
DdeI CTNAG 5 cut(s) 130, 270, 842, 1494, 1620
DpnI GATC 3 cut(s) 7, 1180, 1188
DpnII GATC 3 cut(s) 5, 1178, 1186
DraI TTTAAA 1 cut(s) 1117
DriI GACNNNNNGTC 1 cut(s) 69
EaeI YGGCCR 2 cut(s) 66, 420
EagI CGGCCG 1 cut(s) 66
Eam1104I CTCTTC 3 cut(s) 791, 1073, 1467
Eam1105I GACNNNNNGTC 1 cut(s) 69
EarI CTCTTC 3 cut(s) 791, 1073, 1467
EclXI CGGCCG 1 cut(s) 66
Eco130I CCWWGG 1 cut(s) 1480
Eco31I GGTCTC 1 cut(s) 1379
Eco47I GGWCC 2 cut(s) 27, 775
Eco52I CGGCCG 1 cut(s) 66
Eco57I CTGAAG 5 cut(s) 386, 505, 815, 1097, 1413
Eco88I CYCGRG 1 cut(s) 482
EcoO109I RGGNCCY 2 cut(s) 27, 775
EcoRII CCWGG 2 cut(s) 206, 999
EcoT14I CCWWGG 1 cut(s) 1480
EcoT22I ATGCAT 2 cut(s) 671, 1561
ErhI CCWWGG 1 cut(s) 1480
Esp3I CGTCTC 1 cut(s) 56
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 2 cut(s) 40, 1186
FauNDI CATATG 2 cut(s) 568, 1561
FblI GTMKAC 1 cut(s) 1218
Fnu4HI GCNGC 2 cut(s) 258, 1381
FokI GGATG 3 cut(s) 749, 1568, 1578
Fsp4HI GCNGC 2 cut(s) 258, 1381
FspBI CTAG 3 cut(s) 329, 1176, 1340
GlaI GCGC 1 cut(s) 719
GluI GCNGC 2 cut(s) 258, 1381
HaeIII GGCC 3 cut(s) 68, 422, 1367
HapII CCGG 5 cut(s) 33, 55, 69, 459, 1610
HgaI GACGC 1 cut(s) 718
HhaI GCGC 1 cut(s) 720
Hin1I GRCGYC 1 cut(s) 729
Hin6I GCGC 1 cut(s) 718
HinP1I GCGC 1 cut(s) 718
HincII GTYRAC 2 cut(s) 183, 1284
HindII GTYRAC 2 cut(s) 183, 1284
HindIII AAGCTT 2 cut(s) 225, 803
HinfI GANTC 6 cut(s) 203, 754, 860, 939, 1343, 1637
HpaI GTTAAC 2 cut(s) 183, 1284
HpaII CCGG 5 cut(s) 33, 55, 69, 459, 1610
HphI GGTGA 3 cut(s) 47, 151, 212
Hpy166II GTNNAC 5 cut(s) 183, 616, 1219, 1284, 1545
Hpy188III TCNNGA 1 cut(s) 673
Hpy8I GTNNAC 5 cut(s) 183, 616, 1219, 1284, 1545
Hpy99I CGWCG 1 cut(s) 878
HpyAV CCTTC 6 cut(s) 182, 190, 326, 808, 814, 995
HpyCH4III ACNGT 9 cut(s) 627, 1019, 1213, 1288, 1351, 1373, 1436, 1634, 1688
HpyCH4IV ACGT 3 cut(s) 175, 1005, 1058
HpyCH4V TGCA 7 cut(s) 159, 257, 447, 669, 914, 1559, 1630
HpyF10VI GCNNNNNNNGC 5 cut(s) 118, 131, 165, 726, 905
HpyF3I CTNAG 5 cut(s) 130, 270, 842, 1494, 1620
HpySE526I ACGT 3 cut(s) 175, 1005, 1058
Hsp92I GRCGYC 1 cut(s) 729
HspAI GCGC 1 cut(s) 718
KspAI GTTAAC 2 cut(s) 183, 1284
Kzo9I GATC 3 cut(s) 5, 1178, 1186
LguI GCTCTTC 2 cut(s) 791, 1467
LmnI GCTCC 1 cut(s) 1300
Lsp1109I GCAGC 1 cut(s) 269
LweI GCATC 4 cut(s) 678, 1503, 1546, 1556
MaeI CTAG 3 cut(s) 329, 1176, 1340
MaeII ACGT 3 cut(s) 175, 1005, 1058
MaeIII GTNAC 3 cut(s) 1135, 1577, 1634
MalI GATC 3 cut(s) 7, 1180, 1188
MboI GATC 3 cut(s) 5, 1178, 1186
MfeI CAATTG 1 cut(s) 989
MflI RGATCY 1 cut(s) 5
MhlI GDGCHC 2 cut(s) 170, 1479
MlsI TGGCCA 1 cut(s) 422
MluCI AATT 7 cut(s) 313, 375, 573, 646, 989, 1329, 1441
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 1 cut(s) 1631
MmeI TCCRAC 2 cut(s) 35, 1278
Mox20I TGGCCA 1 cut(s) 422
Mph1103I ATGCAT 2 cut(s) 671, 1561
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 1 cut(s) 422
MslI CAYNNNNRTG 4 cut(s) 154, 1506, 1538, 1564
Msp20I TGGCCA 1 cut(s) 422
MspA1I CMGCKG 1 cut(s) 112
MspCI CTTAAG 1 cut(s) 1361
MspI CCGG 5 cut(s) 33, 55, 69, 459, 1610
MspR9I CCNGG 3 cut(s) 208, 1001, 1610
MunI CAATTG 1 cut(s) 989
MvaI CCWGG 2 cut(s) 208, 1001
MwoI GCNNNNNNNGC 5 cut(s) 118, 131, 165, 726, 905
NciI CCSGG 1 cut(s) 1610
NdeI CATATG 2 cut(s) 568, 1561
NdeII GATC 3 cut(s) 5, 1178, 1186
NlaIV GGNNCC 5 cut(s) 28, 338, 689, 777, 1302
NmeAIII GCCGAG 1 cut(s) 1356
NmuCI GTSAC 2 cut(s) 1577, 1634
NsiI ATGCAT 2 cut(s) 671, 1561
NspI RCATGY 1 cut(s) 125
PaeI GCATGC 1 cut(s) 125
PaeR7I CTCGAG 1 cut(s) 482
PciSI GCTCTTC 2 cut(s) 791, 1467
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 5 cut(s) 203, 754, 860, 939, 1343
PflFI GACNNNGTC 1 cut(s) 454
PflMI CCANNNNNTGG 1 cut(s) 1040
PkrI GCNGC 2 cut(s) 259, 1382
PleI GAGTC 1 cut(s) 1631
PpsI GAGTC 1 cut(s) 1631
PpuMI RGGWCCY 2 cut(s) 27, 775
PshAI GACNNNNGTC 1 cut(s) 1311
Psp5II RGGWCCY 2 cut(s) 27, 775
Psp6I CCWGG 2 cut(s) 206, 999
PspGI CCWGG 2 cut(s) 206, 999
PspN4I GGNNCC 5 cut(s) 28, 338, 689, 777, 1302
PspPI GGNCC 2 cut(s) 27, 775
PspPPI RGGWCCY 2 cut(s) 27, 775
PspXI VCTCGAGB 1 cut(s) 482
PstI CTGCAG 1 cut(s) 259
PstNI CAGNNNCTG 1 cut(s) 1493
PsuI RGATCY 1 cut(s) 5
PsyI GACNNNGTC 1 cut(s) 454
PvuII CAGCTG 1 cut(s) 112
RsaI GTAC 4 cut(s) 593, 871, 1164, 1195
RsaNI GTAC 4 cut(s) 592, 870, 1163, 1194
RseI CAYNNNNRTG 4 cut(s) 154, 1506, 1538, 1564
SapI GCTCTTC 2 cut(s) 791, 1467
SatI GCNGC 2 cut(s) 258, 1381
Sau3AI GATC 3 cut(s) 5, 1178, 1186
Sau96I GGNCC 2 cut(s) 27, 775
SchI GAGTC 1 cut(s) 1631
ScrFI CCNGG 3 cut(s) 208, 1001, 1610
SduI GDGCHC 2 cut(s) 170, 1479
SfaNI GCATC 4 cut(s) 678, 1503, 1546, 1556
SfcI CTRYAG 2 cut(s) 255, 1212
Sfr274I CTCGAG 1 cut(s) 482
SinI GGWCC 2 cut(s) 27, 775
SlaI CTCGAG 1 cut(s) 482
SmiMI CAYNNNNRTG 4 cut(s) 154, 1506, 1538, 1564
SmlI CTYRAG 2 cut(s) 482, 1361
SmoI CTYRAG 2 cut(s) 482, 1361
SphI GCATGC 1 cut(s) 125
Sse9I AATT 7 cut(s) 313, 375, 573, 646, 989, 1329, 1441
SsiI CCGC 4 cut(s) 340, 1380, 1613, 1677
SspMI CTAG 3 cut(s) 329, 1176, 1340
StyD4I CCNGG 3 cut(s) 206, 999, 1608
StyI CCWWGG 1 cut(s) 1480
TaaI ACNGT 9 cut(s) 627, 1019, 1213, 1288, 1351, 1373, 1436, 1634, 1688
TaiI ACGT 3 cut(s) 178, 1008, 1061
TaqI TCGA 4 cut(s) 483, 508, 942, 1315
TaqII GACCGA 1 cut(s) 315
TasI AATT 7 cut(s) 313, 375, 573, 646, 989, 1329, 1441
TatI WGTACW 2 cut(s) 1162, 1193
TauI GCSGC 1 cut(s) 1383
TfiI GAWTC 5 cut(s) 203, 754, 860, 939, 1343
TscAI CASTG 6 cut(s) 630, 1056, 1552, 1582, 1639, 1693
TseFI GTSAC 2 cut(s) 1577, 1634
TseI GCWGC 1 cut(s) 257
Tsp45I GTSAC 2 cut(s) 1577, 1634
TspDTI ATGAA 7 cut(s) 111, 564, 576, 585, 720, 1104, 1485
TspGWI ACGGA 2 cut(s) 78, 200
TspRI CASTG 6 cut(s) 630, 1056, 1552, 1582, 1639, 1693
Tth111I GACNNNGTC 1 cut(s) 454
Van91I CCANNNNNTGG 1 cut(s) 1040
Vha464I CTTAAG 1 cut(s) 1361
VpaK11BI GGWCC 2 cut(s) 27, 775
XapI RAATTY 2 cut(s) 313, 646
XceI RCATGY 1 cut(s) 125
XcmI CCANNNNNNNNNTGG 2 cut(s) 133, 1056
XhoI CTCGAG 1 cut(s) 482
XmiI GTMKAC 1 cut(s) 1218
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 3 cut(s) 329, 1176, 1340
Zsp2I ATGCAT 2 cut(s) 671, 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.